HEADER TRANSPORT PROTEIN 03-JUL-14 4QSE TITLE CRYSTAL STRUCTURE OF ATU4361 SUGAR TRANSPORTER FROM AGROBACTERIUM TITLE 2 FABRUM C58, TARGET EFI-510558, WITH BOUND GLYCEROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC-TYPE SUGAR TRANSPORTER; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 27-410; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM FABRUM; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58; SOURCE 5 GENE: ATU4361; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS SUGAR TRANSPORTER, ABC-TYPE, MALTOSE, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, ISOME, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,N.AL OBAIDI,S.CHAMALA,K.L.ATTONITO, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,J.LAFLEUR,R.D.SIEDEL,B.HILLERICH,J.LOVE, AUTHOR 3 K.L.WHALEN,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 3 28-FEB-24 4QSE 1 REMARK SEQADV REVDAT 2 24-JAN-18 4QSE 1 AUTHOR JRNL REVDAT 1 13-AUG-14 4QSE 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,N.AL OBAIDI,S.CHAMALA, JRNL AUTH 2 A.SCOTT GLENN,J.D.ATTONITO,S.CHOWDHURY,J.LAFLEUR,R.D.SIEDEL, JRNL AUTH 3 B.HILLERICH,J.LOVE,K.L.WHALEN,J.A.GERLT,S.C.ALMO, JRNL AUTH 4 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF MALTOSIDE TRANSPORTER ATU4361 FROM JRNL TITL 2 AGROBACTERIUM FABRUM, TARGET EFI-510558 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 138020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.119 REMARK 3 R VALUE (WORKING SET) : 0.118 REMARK 3 FREE R VALUE : 0.148 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4244 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.37 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10153 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.0950 REMARK 3 BIN FREE R VALUE SET COUNT : 302 REMARK 3 BIN FREE R VALUE : 0.1440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 1094 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : 0.26000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : -0.28000 REMARK 3 B23 (A**2) : -0.50000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.052 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.310 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6260 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 5987 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8532 ; 1.275 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13879 ; 0.790 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 804 ; 5.658 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;34.430 ;25.299 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1062 ;12.418 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;15.928 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 933 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7112 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1366 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3105 ; 1.713 ; 1.833 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3104 ; 1.663 ; 1.832 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3892 ; 1.845 ; 3.106 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3893 ; 1.849 ; 3.107 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3155 ; 2.990 ; 2.188 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3155 ; 2.990 ; 2.188 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4623 ; 3.230 ; 3.530 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8527 ; 3.725 ; 8.026 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8528 ; 3.724 ; 8.027 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 12247 ; 2.801 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 178 ;22.487 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 13011 ; 7.900 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QSE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086453. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 277288 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.17900 REMARK 200 R SYM FOR SHELL (I) : 0.17900 REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.07 CRYSTALLIZATION CONDITIONS, REMARK 280 PROTEIN: 10 MM BIS-TRIS, 500 MM NACL, 10% GLYCEROL, 5 MM DTT, REMARK 280 TEV PROTEASE (1:100 RATIO); RESERVOIR: 0.085 M SODIUM ACETATE, REMARK 280 PH 4.6, 0.017 M AMMONIUM ACETATE, 25% PEG4000, 15% (VOL/VOL/ REMARK 280 GLYCEROL, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 VAL A 14 REMARK 465 ASP A 15 REMARK 465 LEU A 16 REMARK 465 GLY A 17 REMARK 465 THR A 18 REMARK 465 GLU A 19 REMARK 465 ASN A 20 REMARK 465 LEU A 21 REMARK 465 TYR A 22 REMARK 465 PHE A 23 REMARK 465 GLN A 24 REMARK 465 SER A 25 REMARK 465 MET A 26 REMARK 465 GLU A 27 REMARK 465 GLY A 410 REMARK 465 MET B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 VAL B 14 REMARK 465 ASP B 15 REMARK 465 LEU B 16 REMARK 465 GLY B 17 REMARK 465 THR B 18 REMARK 465 GLU B 19 REMARK 465 ASN B 20 REMARK 465 LEU B 21 REMARK 465 TYR B 22 REMARK 465 PHE B 23 REMARK 465 GLN B 24 REMARK 465 SER B 25 REMARK 465 MET B 26 REMARK 465 GLU B 27 REMARK 465 GLY B 410 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 75 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 189 -168.49 -162.07 REMARK 500 LYS A 275 55.57 -102.86 REMARK 500 ASP A 298 179.12 93.56 REMARK 500 ALA A 336 34.83 -90.96 REMARK 500 PHE B 189 -167.50 -161.62 REMARK 500 LYS B 275 55.81 -103.20 REMARK 500 ASP B 298 179.53 92.49 REMARK 500 ALA B 336 34.87 -88.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QRZ RELATED DB: PDB REMARK 900 COMPLEX WITH MALTOTRIOSE REMARK 900 RELATED ID: 4QSC RELATED DB: PDB REMARK 900 COMPLEX WITH MALTOSE REMARK 900 RELATED ID: 4QSD RELATED DB: PDB REMARK 900 COMPLEX WITH SUCROSE REMARK 900 RELATED ID: EFI-510558 RELATED DB: TARGETTRACK DBREF 4QSE A 27 410 UNP A9CGI0 A9CGI0_AGRT5 27 410 DBREF 4QSE B 27 410 UNP A9CGI0 A9CGI0_AGRT5 27 410 SEQADV 4QSE MET A 4 UNP A9CGI0 INITIATING METHIONINE SEQADV 4QSE HIS A 5 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS A 6 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS A 7 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS A 8 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS A 9 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS A 10 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE SER A 11 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE SER A 12 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLY A 13 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE VAL A 14 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE ASP A 15 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE LEU A 16 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLY A 17 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE THR A 18 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLU A 19 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE ASN A 20 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE LEU A 21 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE TYR A 22 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE PHE A 23 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLN A 24 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE SER A 25 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE MET A 26 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE MET B 4 UNP A9CGI0 INITIATING METHIONINE SEQADV 4QSE HIS B 5 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS B 6 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS B 7 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS B 8 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS B 9 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE HIS B 10 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE SER B 11 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE SER B 12 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLY B 13 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE VAL B 14 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE ASP B 15 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE LEU B 16 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLY B 17 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE THR B 18 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLU B 19 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE ASN B 20 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE LEU B 21 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE TYR B 22 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE PHE B 23 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE GLN B 24 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE SER B 25 UNP A9CGI0 EXPRESSION TAG SEQADV 4QSE MET B 26 UNP A9CGI0 EXPRESSION TAG SEQRES 1 A 407 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 407 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU ASP VAL SEQRES 3 A 407 THR LEU THR LEU TRP SER LEU ASP ARG ASP ILE GLN PRO SEQRES 4 A 407 ALA PRO ASN LEU ILE LYS GLU PHE ASN ALA LEU ASN ASN SEQRES 5 A 407 GLY ILE LYS ILE GLU TYR ARG GLN LEU GLN PHE ASP ASP SEQRES 6 A 407 VAL VAL SER GLU SER MET ARG ALA TYR SER THR GLY ASN SEQRES 7 A 407 ALA PRO ASP ILE ILE ALA ILE ASP ASN PRO ASN HIS ALA SEQRES 8 A 407 MET PHE ALA SER ARG GLY ALA PHE LEU ASP VAL THR ASP SEQRES 9 A 407 MET ILE ALA LYS SER ASP VAL ILE LYS THR GLU ASN TYR SEQRES 10 A 407 PHE PRO GLY PRO LEU LYS SER VAL THR TRP ASP GLY LYS SEQRES 11 A 407 TYR PHE GLY VAL PRO LYS ALA THR ASN THR ILE ALA LEU SEQRES 12 A 407 TYR TYR ASN LYS ASP LEU PHE LYS ALA ALA GLY LEU ASP SEQRES 13 A 407 ALA ALA LYS PRO PRO GLN THR TRP ASP GLU LEU VAL ASP SEQRES 14 A 407 ALA ALA ARG LYS LEU THR ASN PRO ALA LYS ASN VAL TYR SEQRES 15 A 407 GLY ILE SER PHE SER ALA LYS ALA ASN GLU GLU GLY THR SEQRES 16 A 407 PHE GLN PHE LEU PRO TRP ALA GLN MET ALA GLY ALA THR SEQRES 17 A 407 TYR LYS ASN ILE ASN THR ASP GLY ALA VAL LYS ALA LEU SEQRES 18 A 407 GLU THR TRP LYS THR LEU LEU ASP GLU LYS LEU ALA SER SEQRES 19 A 407 PRO ASP THR LEU THR ARG SER GLN TRP ASP SER THR ALA SEQRES 20 A 407 THR PHE ASN ALA GLY ASN ALA ALA MET ALA ILE SER GLY SEQRES 21 A 407 PRO TRP GLU ILE ASP ARG MET LEU LYS ASP ALA LYS PHE SEQRES 22 A 407 ASP TRP GLY VAL THR LEU LEU PRO VAL PRO THR PRO ASP SEQRES 23 A 407 ALA PRO ARG SER SER ALA MET GLY ASP TYR ASN TRP ALA SEQRES 24 A 407 ILE PHE SER LYS THR LYS HIS PRO ALA GLU ALA PHE LYS SEQRES 25 A 407 ALA ILE GLU PHE PHE ALA SER LYS ASP LYS ASP MET PHE SEQRES 26 A 407 LYS ASN PHE GLY GLN LEU PRO ALA ARG SER ASP ILE PRO SEQRES 27 A 407 VAL PRO PRO THR GLY ASN ALA LEU LYS ASP GLU ALA LEU SEQRES 28 A 407 LYS THR PHE VAL GLU GLN LEU LYS TYR ALA GLN PRO ARG SEQRES 29 A 407 GLY PRO SER PRO GLU TRP PRO LYS ILE SER LYS ALA ILE SEQRES 30 A 407 GLN ASP ALA ILE GLN GLY ALA LEU SER GLY GLN MET THR SEQRES 31 A 407 PRO LYS ALA ALA LEU ASP GLN ALA ALA GLU LYS ILE LYS SEQRES 32 A 407 LEU VAL ASP GLY SEQRES 1 B 407 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 407 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU ASP VAL SEQRES 3 B 407 THR LEU THR LEU TRP SER LEU ASP ARG ASP ILE GLN PRO SEQRES 4 B 407 ALA PRO ASN LEU ILE LYS GLU PHE ASN ALA LEU ASN ASN SEQRES 5 B 407 GLY ILE LYS ILE GLU TYR ARG GLN LEU GLN PHE ASP ASP SEQRES 6 B 407 VAL VAL SER GLU SER MET ARG ALA TYR SER THR GLY ASN SEQRES 7 B 407 ALA PRO ASP ILE ILE ALA ILE ASP ASN PRO ASN HIS ALA SEQRES 8 B 407 MET PHE ALA SER ARG GLY ALA PHE LEU ASP VAL THR ASP SEQRES 9 B 407 MET ILE ALA LYS SER ASP VAL ILE LYS THR GLU ASN TYR SEQRES 10 B 407 PHE PRO GLY PRO LEU LYS SER VAL THR TRP ASP GLY LYS SEQRES 11 B 407 TYR PHE GLY VAL PRO LYS ALA THR ASN THR ILE ALA LEU SEQRES 12 B 407 TYR TYR ASN LYS ASP LEU PHE LYS ALA ALA GLY LEU ASP SEQRES 13 B 407 ALA ALA LYS PRO PRO GLN THR TRP ASP GLU LEU VAL ASP SEQRES 14 B 407 ALA ALA ARG LYS LEU THR ASN PRO ALA LYS ASN VAL TYR SEQRES 15 B 407 GLY ILE SER PHE SER ALA LYS ALA ASN GLU GLU GLY THR SEQRES 16 B 407 PHE GLN PHE LEU PRO TRP ALA GLN MET ALA GLY ALA THR SEQRES 17 B 407 TYR LYS ASN ILE ASN THR ASP GLY ALA VAL LYS ALA LEU SEQRES 18 B 407 GLU THR TRP LYS THR LEU LEU ASP GLU LYS LEU ALA SER SEQRES 19 B 407 PRO ASP THR LEU THR ARG SER GLN TRP ASP SER THR ALA SEQRES 20 B 407 THR PHE ASN ALA GLY ASN ALA ALA MET ALA ILE SER GLY SEQRES 21 B 407 PRO TRP GLU ILE ASP ARG MET LEU LYS ASP ALA LYS PHE SEQRES 22 B 407 ASP TRP GLY VAL THR LEU LEU PRO VAL PRO THR PRO ASP SEQRES 23 B 407 ALA PRO ARG SER SER ALA MET GLY ASP TYR ASN TRP ALA SEQRES 24 B 407 ILE PHE SER LYS THR LYS HIS PRO ALA GLU ALA PHE LYS SEQRES 25 B 407 ALA ILE GLU PHE PHE ALA SER LYS ASP LYS ASP MET PHE SEQRES 26 B 407 LYS ASN PHE GLY GLN LEU PRO ALA ARG SER ASP ILE PRO SEQRES 27 B 407 VAL PRO PRO THR GLY ASN ALA LEU LYS ASP GLU ALA LEU SEQRES 28 B 407 LYS THR PHE VAL GLU GLN LEU LYS TYR ALA GLN PRO ARG SEQRES 29 B 407 GLY PRO SER PRO GLU TRP PRO LYS ILE SER LYS ALA ILE SEQRES 30 B 407 GLN ASP ALA ILE GLN GLY ALA LEU SER GLY GLN MET THR SEQRES 31 B 407 PRO LYS ALA ALA LEU ASP GLN ALA ALA GLU LYS ILE LYS SEQRES 32 B 407 LEU VAL ASP GLY HET GOL A 501 6 HET GOL A 502 6 HET GOL B 501 6 HET GOL B 502 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 HOH *1094(H2 O) HELIX 1 1 GLN A 41 LEU A 53 1 13 HELIX 2 2 GLN A 65 ASP A 67 5 3 HELIX 3 3 ASP A 68 GLY A 80 1 13 HELIX 4 4 ASN A 92 ARG A 99 1 8 HELIX 5 5 VAL A 105 SER A 112 1 8 HELIX 6 6 LYS A 116 TYR A 120 5 5 HELIX 7 7 PHE A 121 VAL A 128 1 8 HELIX 8 8 LYS A 150 ALA A 156 1 7 HELIX 9 9 THR A 166 THR A 178 1 13 HELIX 10 10 ASN A 179 ASN A 183 5 5 HELIX 11 11 ASN A 194 ALA A 208 1 15 HELIX 12 12 THR A 211 ILE A 215 5 5 HELIX 13 13 THR A 217 GLU A 233 1 17 HELIX 14 14 SER A 237 THR A 242 5 6 HELIX 15 15 SER A 244 ALA A 254 1 11 HELIX 16 16 GLY A 263 TRP A 265 5 3 HELIX 17 17 GLU A 266 ALA A 274 1 9 HELIX 18 18 HIS A 309 LYS A 323 1 15 HELIX 19 19 ASP A 326 GLY A 332 1 7 HELIX 20 20 ASN A 347 LYS A 362 1 16 HELIX 21 21 GLU A 372 SER A 389 1 18 HELIX 22 22 THR A 393 ASP A 409 1 17 HELIX 23 23 GLN B 41 LEU B 53 1 13 HELIX 24 24 GLN B 65 ASP B 67 5 3 HELIX 25 25 ASP B 68 GLY B 80 1 13 HELIX 26 26 ASN B 92 ARG B 99 1 8 HELIX 27 27 VAL B 105 SER B 112 1 8 HELIX 28 28 LYS B 116 TYR B 120 5 5 HELIX 29 29 PHE B 121 VAL B 128 1 8 HELIX 30 30 LYS B 150 ALA B 156 1 7 HELIX 31 31 THR B 166 THR B 178 1 13 HELIX 32 32 ASN B 179 ASN B 183 5 5 HELIX 33 33 ASN B 194 ALA B 208 1 15 HELIX 34 34 THR B 211 ILE B 215 5 5 HELIX 35 35 THR B 217 GLU B 233 1 17 HELIX 36 36 SER B 237 THR B 242 5 6 HELIX 37 37 SER B 244 ALA B 254 1 11 HELIX 38 38 GLY B 263 TRP B 265 5 3 HELIX 39 39 GLU B 266 ALA B 274 1 9 HELIX 40 40 HIS B 309 LYS B 323 1 15 HELIX 41 41 ASP B 326 GLY B 332 1 7 HELIX 42 42 ASN B 347 LYS B 362 1 16 HELIX 43 43 GLU B 372 SER B 389 1 18 HELIX 44 44 THR B 393 ASP B 409 1 17 SHEET 1 A 5 ILE A 57 GLN A 63 0 SHEET 2 A 5 VAL A 29 SER A 35 1 N LEU A 31 O LYS A 58 SHEET 3 A 5 ILE A 85 ASP A 89 1 O ILE A 85 N TRP A 34 SHEET 4 A 5 TYR A 299 ILE A 303 -1 O ASN A 300 N ILE A 88 SHEET 5 A 5 VAL A 137 PRO A 138 -1 N VAL A 137 O TRP A 301 SHEET 1 B 2 THR A 129 TRP A 130 0 SHEET 2 B 2 LYS A 133 TYR A 134 -1 O LYS A 133 N TRP A 130 SHEET 1 C 3 MET A 259 SER A 262 0 SHEET 2 C 3 ALA A 145 ASN A 149 -1 N TYR A 147 O ALA A 260 SHEET 3 C 3 TRP A 278 THR A 281 -1 O THR A 281 N LEU A 146 SHEET 1 D 2 SER A 294 ALA A 295 0 SHEET 2 D 2 ALA A 364 GLN A 365 1 O GLN A 365 N SER A 294 SHEET 1 E 5 ILE B 57 GLN B 63 0 SHEET 2 E 5 VAL B 29 SER B 35 1 N LEU B 31 O LYS B 58 SHEET 3 E 5 ILE B 85 ASP B 89 1 O ILE B 85 N TRP B 34 SHEET 4 E 5 TYR B 299 ILE B 303 -1 O ASN B 300 N ILE B 88 SHEET 5 E 5 VAL B 137 PRO B 138 -1 N VAL B 137 O TRP B 301 SHEET 1 F 2 THR B 129 TRP B 130 0 SHEET 2 F 2 LYS B 133 TYR B 134 -1 O LYS B 133 N TRP B 130 SHEET 1 G 3 MET B 259 SER B 262 0 SHEET 2 G 3 ALA B 145 ASN B 149 -1 N TYR B 147 O ALA B 260 SHEET 3 G 3 TRP B 278 THR B 281 -1 O THR B 281 N LEU B 146 SHEET 1 H 2 SER B 294 ALA B 295 0 SHEET 2 H 2 ALA B 364 GLN B 365 1 O GLN B 365 N SER B 294 CISPEP 1 GLY A 368 PRO A 369 0 2.81 CISPEP 2 GLY B 368 PRO B 369 0 1.56 SITE 1 AC1 7 ASP A 89 ASN A 142 GLU A 195 GLY A 297 SITE 2 AC1 7 ASP A 298 ARG A 367 HOH A 863 SITE 1 AC2 6 LYS A 150 ASP A 277 TRP A 278 HOH A 678 SITE 2 AC2 6 HOH A 714 HOH A 877 SITE 1 AC3 7 ASP B 89 ASN B 142 GLU B 195 GLY B 297 SITE 2 AC3 7 ASP B 298 ARG B 367 HOH B 780 SITE 1 AC4 7 LYS B 150 ASP B 277 TRP B 278 HOH B 653 SITE 2 AC4 7 HOH B 732 HOH B 869 HOH B1028 CRYST1 36.088 67.538 75.960 90.00 90.11 90.74 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027710 0.000356 0.000053 0.00000 SCALE2 0.000000 0.014808 0.000002 0.00000 SCALE3 0.000000 0.000000 0.013165 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.999990 -0.000860 -0.004389 24.54057 1 MTRIX2 2 0.000858 -1.000000 0.000409 -13.12705 1 MTRIX3 2 -0.004389 0.000405 0.999990 -37.90919 1