data_4QT6 # _entry.id 4QT6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4QT6 RCSB RCSB086481 WWPDB D_1000086481 # _pdbx_database_status.entry_id 4QT6 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-07-07 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dong, A.' 1 'Hu, J.' 2 'Guan, X.' 3 'Wernimont, A.' 4 'Li, Y.' 5 'Bountra, C.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.M.' 8 'Tong, Y.' 9 'Structural Genomics Consortium (SGC)' 10 # _citation.id primary _citation.title 'Crystal structure of the SPRY domain of human HERC1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hu, J.' 1 primary 'Dong, A.' 2 primary 'Guan, X.' 3 primary 'Wernimont, A.' 4 primary 'Li, Y.' 5 primary 'Bountra, C.' 6 primary 'Arrowsmith, C.H.' 7 primary 'Edwards, A.M.' 8 primary 'Tong, Y.' 9 # _cell.length_a 99.730 _cell.length_b 99.730 _cell.length_c 99.730 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4QT6 _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 2 3' _symmetry.entry_id 4QT6 _symmetry.Int_Tables_number 197 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable E3 ubiquitin-protein ligase HERC1' 17992.352 1 ? ? 'SPRY domain (UNP residues 2035-2192)' ? 2 non-polymer syn FORMAMIDE 45.041 7 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 5 ? ? ? ? 4 water nat water 18.015 157 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HECT domain and RCC1-like domain-containing protein 1, p532, p619' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSD(MSE)W LYRAYSGNLYHNGEQTLTLSSFTQGDFITCVLD(MSE)EARTISFGKNGEEPKLAFEDVDAAELYPCV(MSE)FYSSNPG EKVKICD(MSE)Q(MSE)R ; _entity_poly.pdbx_seq_one_letter_code_can ;GFDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRA YSGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSSNPGEKVKICDMQMR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PHE n 1 3 ASP n 1 4 PRO n 1 5 GLU n 1 6 LYS n 1 7 ALA n 1 8 GLN n 1 9 CYS n 1 10 CYS n 1 11 LEU n 1 12 VAL n 1 13 GLU n 1 14 ASN n 1 15 GLY n 1 16 GLN n 1 17 ILE n 1 18 LEU n 1 19 THR n 1 20 HIS n 1 21 GLY n 1 22 SER n 1 23 GLY n 1 24 GLY n 1 25 LYS n 1 26 GLY n 1 27 TYR n 1 28 GLY n 1 29 LEU n 1 30 ALA n 1 31 SER n 1 32 THR n 1 33 GLY n 1 34 VAL n 1 35 THR n 1 36 SER n 1 37 GLY n 1 38 CYS n 1 39 TYR n 1 40 GLN n 1 41 TRP n 1 42 LYS n 1 43 PHE n 1 44 TYR n 1 45 ILE n 1 46 VAL n 1 47 LYS n 1 48 GLU n 1 49 ASN n 1 50 ARG n 1 51 GLY n 1 52 ASN n 1 53 GLU n 1 54 GLY n 1 55 THR n 1 56 CYS n 1 57 VAL n 1 58 GLY n 1 59 VAL n 1 60 SER n 1 61 ARG n 1 62 TRP n 1 63 PRO n 1 64 VAL n 1 65 HIS n 1 66 ASP n 1 67 PHE n 1 68 ASN n 1 69 HIS n 1 70 ARG n 1 71 THR n 1 72 THR n 1 73 SER n 1 74 ASP n 1 75 MSE n 1 76 TRP n 1 77 LEU n 1 78 TYR n 1 79 ARG n 1 80 ALA n 1 81 TYR n 1 82 SER n 1 83 GLY n 1 84 ASN n 1 85 LEU n 1 86 TYR n 1 87 HIS n 1 88 ASN n 1 89 GLY n 1 90 GLU n 1 91 GLN n 1 92 THR n 1 93 LEU n 1 94 THR n 1 95 LEU n 1 96 SER n 1 97 SER n 1 98 PHE n 1 99 THR n 1 100 GLN n 1 101 GLY n 1 102 ASP n 1 103 PHE n 1 104 ILE n 1 105 THR n 1 106 CYS n 1 107 VAL n 1 108 LEU n 1 109 ASP n 1 110 MSE n 1 111 GLU n 1 112 ALA n 1 113 ARG n 1 114 THR n 1 115 ILE n 1 116 SER n 1 117 PHE n 1 118 GLY n 1 119 LYS n 1 120 ASN n 1 121 GLY n 1 122 GLU n 1 123 GLU n 1 124 PRO n 1 125 LYS n 1 126 LEU n 1 127 ALA n 1 128 PHE n 1 129 GLU n 1 130 ASP n 1 131 VAL n 1 132 ASP n 1 133 ALA n 1 134 ALA n 1 135 GLU n 1 136 LEU n 1 137 TYR n 1 138 PRO n 1 139 CYS n 1 140 VAL n 1 141 MSE n 1 142 PHE n 1 143 TYR n 1 144 SER n 1 145 SER n 1 146 ASN n 1 147 PRO n 1 148 GLY n 1 149 GLU n 1 150 LYS n 1 151 VAL n 1 152 LYS n 1 153 ILE n 1 154 CYS n 1 155 ASP n 1 156 MSE n 1 157 GLN n 1 158 MSE n 1 159 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene HERC1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-V2R' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HERC1_HUMAN _struct_ref.pdbx_db_accession Q15751 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FDPEKAQCCLVENGQILTHGSGGKGYGLASTGVTSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAY SGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSSNPGEKVKICDMQMR ; _struct_ref.pdbx_align_begin 2035 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4QT6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 159 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q15751 _struct_ref_seq.db_align_beg 2035 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2192 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2035 _struct_ref_seq.pdbx_auth_seq_align_end 2192 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4QT6 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q15751 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 2034 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARF 'L-peptide NH3 amino terminus' . FORMAMIDE ? 'C H3 N O' 45.041 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4QT6 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;0.5 uL protein (mixed 1:700 w/w chymotrypsin:protein before setup) + 0.5 uL well solution (16% w/v PEG 8000, 0.04 M potassium phosphate monobasic, 20% v/v glycerol) + 0.1 uL 40% formamide (4% final concentration), VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN A200' _diffrn_detector.pdbx_collection_date 2014-06-26 _diffrn_detector.details 'VeriMax HF' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5406 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_wavelength_list 1.5406 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4QT6 _reflns.d_resolution_high 1.640 _reflns.d_resolution_low 50.0 _reflns.number_obs 20404 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_netI_over_sigmaI 80.4 _reflns.pdbx_chi_squared 1.080 _reflns.pdbx_redundancy 27.8 _reflns.percent_possible_obs 99.9 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 19.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.640 1.670 ? ? ? 0.864 ? ? 0.671 27.2 ? 1004 100.0 1 1 1.670 1.700 ? ? ? 0.727 ? ? 0.693 27.1 ? 1020 100.0 2 1 1.700 1.730 ? ? ? 0.616 ? ? 0.721 27.3 ? 1008 100.0 3 1 1.730 1.770 ? ? ? 0.504 ? ? 0.735 27.4 ? 1009 100.0 4 1 1.770 1.810 ? ? ? 0.413 ? ? 0.754 27.5 ? 996 100.0 5 1 1.810 1.850 ? ? ? 0.349 ? ? 0.787 27.6 ? 1022 100.0 6 1 1.850 1.890 ? ? ? 0.274 ? ? 0.843 27.7 ? 1004 100.0 7 1 1.890 1.940 ? ? ? 0.212 ? ? 0.908 27.8 ? 1013 100.0 8 1 1.940 2.000 ? ? ? 0.180 ? ? 0.952 27.9 ? 1000 100.0 9 1 2.000 2.070 ? ? ? 0.151 ? ? 0.996 28.0 ? 1020 100.0 10 1 2.070 2.140 ? ? ? 0.120 ? ? 1.053 28.0 ? 1024 100.0 11 1 2.140 2.230 ? ? ? 0.108 ? ? 1.105 28.3 ? 1015 100.0 12 1 2.230 2.330 ? ? ? 0.092 ? ? 1.165 28.3 ? 1024 100.0 13 1 2.330 2.450 ? ? ? 0.081 ? ? 1.134 28.4 ? 1012 100.0 14 1 2.450 2.600 ? ? ? 0.067 ? ? 1.209 28.5 ? 1014 100.0 15 1 2.600 2.800 ? ? ? 0.057 ? ? 1.275 28.5 ? 1036 100.0 16 1 2.800 3.090 ? ? ? 0.046 ? ? 1.479 28.5 ? 1020 100.0 17 1 3.090 3.530 ? ? ? 0.038 ? ? 1.762 28.3 ? 1041 100.0 18 1 3.530 4.450 ? ? ? 0.033 ? ? 1.758 28.2 ? 1048 100.0 19 1 4.450 50.000 ? ? ? 0.029 ? ? 1.475 25.6 ? 1074 98.6 20 1 # _refine.entry_id 4QT6 _refine.ls_d_res_high 1.640 _refine.ls_d_res_low 50.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.06 _refine.ls_number_reflns_obs 20208 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1711 _refine.ls_R_factor_R_work 0.1698 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2123 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 3.2 _refine.ls_number_reflns_R_free 637 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.4670 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9710 _refine.correlation_coeff_Fo_to_Fc_free 0.9480 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.0930 _refine.pdbx_overall_ESU_R_Free 0.0970 _refine.overall_SU_ML 0.0590 _refine.overall_SU_B 1.6930 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 59.930 _refine.B_iso_min 14.860 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1233 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 157 _refine_hist.number_atoms_total 1416 _refine_hist.d_res_high 1.640 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1360 0.009 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1222 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1843 1.433 1.959 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 2819 0.744 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 179 6.794 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 66 38.193 24.697 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 202 10.580 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 6 21.229 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 190 0.088 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1636 0.006 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 374 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 682 1.294 2.325 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 682 1.294 2.325 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 852 1.951 3.456 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.64 _refine_ls_shell.d_res_low 1.682 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.number_reflns_R_work 1447 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2190 _refine_ls_shell.R_factor_R_free 0.2780 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 43 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1490 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4QT6 _struct.title 'Crystal structure of the SPRY domain of human HERC1' _struct.pdbx_descriptor 'Probable E3 ubiquitin-protein ligase HERC1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QT6 _struct_keywords.text 'SPRY, B30.2, HERC1, E3 ubiquitin ligase, structural genomics, Structural Genomics Consortium, SGC, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASP 74 C ? ? ? 1_555 A MSE 75 N ? ? A ASP 2107 A MSE 2108 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 75 C ? ? ? 1_555 A TRP 76 N ? ? A MSE 2108 A TRP 2109 1_555 ? ? ? ? ? ? ? 1.310 ? covale3 covale ? ? A ASP 109 C ? ? ? 1_555 A MSE 110 N ? ? A ASP 2142 A MSE 2143 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 110 C ? ? ? 1_555 A GLU 111 N ? ? A MSE 2143 A GLU 2144 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? A VAL 140 C ? ? ? 1_555 A MSE 141 N A ? A VAL 2173 A MSE 2174 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A VAL 140 C ? ? ? 1_555 A MSE 141 N B ? A VAL 2173 A MSE 2174 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A MSE 141 C ? ? ? 1_555 A PHE 142 N ? ? A MSE 2174 A PHE 2175 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A ASP 155 C ? ? ? 1_555 A MSE 156 N A ? A ASP 2188 A MSE 2189 1_555 ? ? ? ? ? ? ? 1.326 ? covale9 covale ? ? A ASP 155 C ? ? ? 1_555 A MSE 156 N B ? A ASP 2188 A MSE 2189 1_555 ? ? ? ? ? ? ? 1.332 ? covale10 covale ? ? A MSE 156 C A ? ? 1_555 A GLN 157 N ? ? A MSE 2189 A GLN 2190 1_555 ? ? ? ? ? ? ? 1.332 ? covale11 covale ? ? A MSE 156 C B ? ? 1_555 A GLN 157 N ? ? A MSE 2189 A GLN 2190 1_555 ? ? ? ? ? ? ? 1.318 ? covale12 covale ? ? A GLN 157 C ? ? ? 1_555 A MSE 158 N A ? A GLN 2190 A MSE 2191 1_555 ? ? ? ? ? ? ? 1.327 ? covale13 covale ? ? A GLN 157 C ? ? ? 1_555 A MSE 158 N B ? A GLN 2190 A MSE 2191 1_555 ? ? ? ? ? ? ? 1.324 ? covale14 covale ? ? A MSE 158 C ? ? ? 1_555 A ARG 159 N ? ? A MSE 2191 A ARG 2192 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 62 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 2095 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 63 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 2096 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.92 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 2 ? GLN A 8 ? PHE A 2035 GLN A 2041 A 2 GLY A 26 ? ALA A 30 ? GLY A 2059 ALA A 2063 A 3 TYR A 137 ? PHE A 142 ? TYR A 2170 PHE A 2175 A 4 THR A 55 ? SER A 60 ? THR A 2088 SER A 2093 A 5 MSE A 75 ? ARG A 79 ? MSE A 2108 ARG A 2112 A 6 ASN A 84 ? TYR A 86 ? ASN A 2117 TYR A 2119 A 7 GLU A 90 ? THR A 94 ? GLU A 2123 THR A 2127 B 1 CYS A 10 ? GLU A 13 ? CYS A 2043 GLU A 2046 B 2 ILE A 17 ? HIS A 20 ? ILE A 2050 HIS A 2053 B 3 LYS A 150 ? CYS A 154 ? LYS A 2183 CYS A 2187 B 4 CYS A 38 ? LYS A 47 ? CYS A 2071 LYS A 2080 B 5 PHE A 103 ? ASP A 109 ? PHE A 2136 ASP A 2142 B 6 THR A 114 ? LYS A 119 ? THR A 2147 LYS A 2152 B 7 LYS A 125 ? PHE A 128 ? LYS A 2158 PHE A 2161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 8 ? N GLN A 2041 O TYR A 27 ? O TYR A 2060 A 2 3 N GLY A 26 ? N GLY A 2059 O PHE A 142 ? O PHE A 2175 A 3 4 O MSE A 141 ? O MSE A 2174 N CYS A 56 ? N CYS A 2089 A 4 5 N VAL A 59 ? N VAL A 2092 O TRP A 76 ? O TRP A 2109 A 5 6 N ARG A 79 ? N ARG A 2112 O ASN A 84 ? O ASN A 2117 A 6 7 N LEU A 85 ? N LEU A 2118 O GLN A 91 ? O GLN A 2124 B 1 2 N LEU A 11 ? N LEU A 2044 O THR A 19 ? O THR A 2052 B 2 3 N LEU A 18 ? N LEU A 2051 O VAL A 151 ? O VAL A 2184 B 3 4 O LYS A 152 ? O LYS A 2185 N TYR A 44 ? N TYR A 2077 B 4 5 N TRP A 41 ? N TRP A 2074 O CYS A 106 ? O CYS A 2139 B 5 6 N ASP A 109 ? N ASP A 2142 O THR A 114 ? O THR A 2147 B 6 7 N ILE A 115 ? N ILE A 2148 O ALA A 127 ? O ALA A 2160 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ARF A 2201' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE ARF A 2202' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ARF A 2203' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ARF A 2204' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ARF A 2205' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ARF A 2206' AC7 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE ARF A 2207' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASN A 52 ? ASN A 2085 . ? 1_555 ? 2 AC1 5 GLU A 53 ? GLU A 2086 . ? 1_555 ? 3 AC1 5 ARG A 79 ? ARG A 2112 . ? 1_555 ? 4 AC1 5 TYR A 81 ? TYR A 2114 . ? 1_555 ? 5 AC1 5 TYR A 143 ? TYR A 2176 . ? 1_555 ? 6 AC2 7 TYR A 78 ? TYR A 2111 . ? 1_555 ? 7 AC2 7 LEU A 95 ? LEU A 2128 . ? 1_555 ? 8 AC2 7 SER A 96 ? SER A 2129 . ? 1_555 ? 9 AC2 7 PHE A 117 ? PHE A 2150 . ? 1_555 ? 10 AC2 7 LYS A 119 ? LYS A 2152 . ? 1_555 ? 11 AC2 7 LYS A 125 ? LYS A 2158 . ? 1_555 ? 12 AC2 7 HOH N . ? HOH A 2443 . ? 1_555 ? 13 AC3 6 THR A 32 ? THR A 2065 . ? 1_555 ? 14 AC3 6 TYR A 39 ? TYR A 2072 . ? 1_555 ? 15 AC3 6 ARF H . ? ARF A 2207 . ? 24_554 ? 16 AC3 6 HOH N . ? HOH A 2385 . ? 1_555 ? 17 AC3 6 HOH N . ? HOH A 2389 . ? 1_555 ? 18 AC3 6 HOH N . ? HOH A 2438 . ? 1_555 ? 19 AC4 5 PHE A 103 ? PHE A 2136 . ? 1_555 ? 20 AC4 5 ALA A 133 ? ALA A 2166 . ? 19_554 ? 21 AC4 5 ALA A 134 ? ALA A 2167 . ? 19_554 ? 22 AC4 5 GLU A 135 ? GLU A 2168 . ? 19_554 ? 23 AC4 5 ARG A 159 ? ARG A 2192 . ? 1_555 ? 24 AC5 5 GLY A 1 ? GLY A 2034 . ? 1_555 ? 25 AC5 5 TYR A 39 ? TYR A 2072 . ? 1_555 ? 26 AC5 5 ILE A 153 ? ILE A 2186 . ? 1_555 ? 27 AC5 5 HOH N . ? HOH A 2334 . ? 1_555 ? 28 AC5 5 HOH N . ? HOH A 2385 . ? 1_555 ? 29 AC6 4 ASN A 52 ? ASN A 2085 . ? 1_555 ? 30 AC6 4 GLU A 53 ? GLU A 2086 . ? 1_555 ? 31 AC6 4 SER A 144 ? SER A 2177 . ? 1_555 ? 32 AC6 4 HOH N . ? HOH A 2309 . ? 1_555 ? 33 AC7 6 CYS A 9 ? CYS A 2042 . ? 1_555 ? 34 AC7 6 LEU A 11 ? LEU A 2044 . ? 1_555 ? 35 AC7 6 GLY A 21 ? GLY A 2054 . ? 1_555 ? 36 AC7 6 SER A 22 ? SER A 2055 . ? 1_555 ? 37 AC7 6 ARF D . ? ARF A 2203 . ? 18_555 ? 38 AC7 6 HOH N . ? HOH A 2438 . ? 18_555 ? # _atom_sites.entry_id 4QT6 _atom_sites.fract_transf_matrix[1][1] 0.010027 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010027 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010027 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2034 2034 GLY GLY A . n A 1 2 PHE 2 2035 2035 PHE PHE A . n A 1 3 ASP 3 2036 2036 ASP ASP A . n A 1 4 PRO 4 2037 2037 PRO PRO A . n A 1 5 GLU 5 2038 2038 GLU GLU A . n A 1 6 LYS 6 2039 2039 LYS LYS A . n A 1 7 ALA 7 2040 2040 ALA ALA A . n A 1 8 GLN 8 2041 2041 GLN GLN A . n A 1 9 CYS 9 2042 2042 CYS CYS A . n A 1 10 CYS 10 2043 2043 CYS CYS A . n A 1 11 LEU 11 2044 2044 LEU LEU A . n A 1 12 VAL 12 2045 2045 VAL VAL A . n A 1 13 GLU 13 2046 2046 GLU GLU A . n A 1 14 ASN 14 2047 2047 ASN ASN A . n A 1 15 GLY 15 2048 2048 GLY GLY A . n A 1 16 GLN 16 2049 2049 GLN GLN A . n A 1 17 ILE 17 2050 2050 ILE ILE A . n A 1 18 LEU 18 2051 2051 LEU LEU A . n A 1 19 THR 19 2052 2052 THR THR A . n A 1 20 HIS 20 2053 2053 HIS HIS A . n A 1 21 GLY 21 2054 2054 GLY GLY A . n A 1 22 SER 22 2055 2055 SER SER A . n A 1 23 GLY 23 2056 2056 GLY GLY A . n A 1 24 GLY 24 2057 2057 GLY GLY A . n A 1 25 LYS 25 2058 2058 LYS LYS A . n A 1 26 GLY 26 2059 2059 GLY GLY A . n A 1 27 TYR 27 2060 2060 TYR TYR A . n A 1 28 GLY 28 2061 2061 GLY GLY A . n A 1 29 LEU 29 2062 2062 LEU LEU A . n A 1 30 ALA 30 2063 2063 ALA ALA A . n A 1 31 SER 31 2064 2064 SER SER A . n A 1 32 THR 32 2065 2065 THR THR A . n A 1 33 GLY 33 2066 2066 GLY GLY A . n A 1 34 VAL 34 2067 2067 VAL VAL A . n A 1 35 THR 35 2068 2068 THR THR A . n A 1 36 SER 36 2069 2069 SER SER A . n A 1 37 GLY 37 2070 2070 GLY GLY A . n A 1 38 CYS 38 2071 2071 CYS CYS A . n A 1 39 TYR 39 2072 2072 TYR TYR A . n A 1 40 GLN 40 2073 2073 GLN GLN A . n A 1 41 TRP 41 2074 2074 TRP TRP A . n A 1 42 LYS 42 2075 2075 LYS LYS A . n A 1 43 PHE 43 2076 2076 PHE PHE A . n A 1 44 TYR 44 2077 2077 TYR TYR A . n A 1 45 ILE 45 2078 2078 ILE ILE A . n A 1 46 VAL 46 2079 2079 VAL VAL A . n A 1 47 LYS 47 2080 2080 LYS LYS A . n A 1 48 GLU 48 2081 2081 GLU GLU A . n A 1 49 ASN 49 2082 2082 ASN ASN A . n A 1 50 ARG 50 2083 2083 ARG ARG A . n A 1 51 GLY 51 2084 2084 GLY GLY A . n A 1 52 ASN 52 2085 2085 ASN ASN A . n A 1 53 GLU 53 2086 2086 GLU GLU A . n A 1 54 GLY 54 2087 2087 GLY GLY A . n A 1 55 THR 55 2088 2088 THR THR A . n A 1 56 CYS 56 2089 2089 CYS CYS A . n A 1 57 VAL 57 2090 2090 VAL VAL A . n A 1 58 GLY 58 2091 2091 GLY GLY A . n A 1 59 VAL 59 2092 2092 VAL VAL A . n A 1 60 SER 60 2093 2093 SER SER A . n A 1 61 ARG 61 2094 2094 ARG ARG A . n A 1 62 TRP 62 2095 2095 TRP TRP A . n A 1 63 PRO 63 2096 2096 PRO PRO A . n A 1 64 VAL 64 2097 2097 VAL VAL A . n A 1 65 HIS 65 2098 2098 HIS HIS A . n A 1 66 ASP 66 2099 2099 ASP ASP A . n A 1 67 PHE 67 2100 2100 PHE PHE A . n A 1 68 ASN 68 2101 2101 ASN ASN A . n A 1 69 HIS 69 2102 2102 HIS HIS A . n A 1 70 ARG 70 2103 2103 ARG ARG A . n A 1 71 THR 71 2104 2104 THR THR A . n A 1 72 THR 72 2105 2105 THR THR A . n A 1 73 SER 73 2106 2106 SER SER A . n A 1 74 ASP 74 2107 2107 ASP ASP A . n A 1 75 MSE 75 2108 2108 MSE MSE A . n A 1 76 TRP 76 2109 2109 TRP TRP A . n A 1 77 LEU 77 2110 2110 LEU LEU A . n A 1 78 TYR 78 2111 2111 TYR TYR A . n A 1 79 ARG 79 2112 2112 ARG ARG A . n A 1 80 ALA 80 2113 2113 ALA ALA A . n A 1 81 TYR 81 2114 2114 TYR TYR A . n A 1 82 SER 82 2115 2115 SER SER A . n A 1 83 GLY 83 2116 2116 GLY GLY A . n A 1 84 ASN 84 2117 2117 ASN ASN A . n A 1 85 LEU 85 2118 2118 LEU LEU A . n A 1 86 TYR 86 2119 2119 TYR TYR A . n A 1 87 HIS 87 2120 2120 HIS HIS A . n A 1 88 ASN 88 2121 2121 ASN ASN A . n A 1 89 GLY 89 2122 2122 GLY GLY A . n A 1 90 GLU 90 2123 2123 GLU GLU A . n A 1 91 GLN 91 2124 2124 GLN GLN A . n A 1 92 THR 92 2125 2125 THR THR A . n A 1 93 LEU 93 2126 2126 LEU LEU A . n A 1 94 THR 94 2127 2127 THR THR A . n A 1 95 LEU 95 2128 2128 LEU LEU A . n A 1 96 SER 96 2129 2129 SER SER A . n A 1 97 SER 97 2130 2130 SER SER A . n A 1 98 PHE 98 2131 2131 PHE PHE A . n A 1 99 THR 99 2132 2132 THR THR A . n A 1 100 GLN 100 2133 2133 GLN GLN A . n A 1 101 GLY 101 2134 2134 GLY GLY A . n A 1 102 ASP 102 2135 2135 ASP ASP A . n A 1 103 PHE 103 2136 2136 PHE PHE A . n A 1 104 ILE 104 2137 2137 ILE ILE A . n A 1 105 THR 105 2138 2138 THR THR A . n A 1 106 CYS 106 2139 2139 CYS CYS A . n A 1 107 VAL 107 2140 2140 VAL VAL A . n A 1 108 LEU 108 2141 2141 LEU LEU A . n A 1 109 ASP 109 2142 2142 ASP ASP A . n A 1 110 MSE 110 2143 2143 MSE MSE A . n A 1 111 GLU 111 2144 2144 GLU GLU A . n A 1 112 ALA 112 2145 2145 ALA ALA A . n A 1 113 ARG 113 2146 2146 ARG ARG A . n A 1 114 THR 114 2147 2147 THR THR A . n A 1 115 ILE 115 2148 2148 ILE ILE A . n A 1 116 SER 116 2149 2149 SER SER A . n A 1 117 PHE 117 2150 2150 PHE PHE A . n A 1 118 GLY 118 2151 2151 GLY GLY A . n A 1 119 LYS 119 2152 2152 LYS LYS A . n A 1 120 ASN 120 2153 2153 ASN ASN A . n A 1 121 GLY 121 2154 2154 GLY GLY A . n A 1 122 GLU 122 2155 2155 GLU GLU A . n A 1 123 GLU 123 2156 2156 GLU GLU A . n A 1 124 PRO 124 2157 2157 PRO PRO A . n A 1 125 LYS 125 2158 2158 LYS LYS A . n A 1 126 LEU 126 2159 2159 LEU LEU A . n A 1 127 ALA 127 2160 2160 ALA ALA A . n A 1 128 PHE 128 2161 2161 PHE PHE A . n A 1 129 GLU 129 2162 2162 GLU GLU A . n A 1 130 ASP 130 2163 2163 ASP ASP A . n A 1 131 VAL 131 2164 2164 VAL VAL A . n A 1 132 ASP 132 2165 2165 ASP ASP A . n A 1 133 ALA 133 2166 2166 ALA ALA A . n A 1 134 ALA 134 2167 2167 ALA ALA A . n A 1 135 GLU 135 2168 2168 GLU GLU A . n A 1 136 LEU 136 2169 2169 LEU LEU A . n A 1 137 TYR 137 2170 2170 TYR TYR A . n A 1 138 PRO 138 2171 2171 PRO PRO A . n A 1 139 CYS 139 2172 2172 CYS CYS A . n A 1 140 VAL 140 2173 2173 VAL VAL A . n A 1 141 MSE 141 2174 2174 MSE MSE A . n A 1 142 PHE 142 2175 2175 PHE PHE A . n A 1 143 TYR 143 2176 2176 TYR TYR A . n A 1 144 SER 144 2177 2177 SER SER A . n A 1 145 SER 145 2178 2178 SER SER A . n A 1 146 ASN 146 2179 2179 ASN ASN A . n A 1 147 PRO 147 2180 2180 PRO PRO A . n A 1 148 GLY 148 2181 2181 GLY GLY A . n A 1 149 GLU 149 2182 2182 GLU GLU A . n A 1 150 LYS 150 2183 2183 LYS LYS A . n A 1 151 VAL 151 2184 2184 VAL VAL A . n A 1 152 LYS 152 2185 2185 LYS LYS A . n A 1 153 ILE 153 2186 2186 ILE ILE A . n A 1 154 CYS 154 2187 2187 CYS CYS A . n A 1 155 ASP 155 2188 2188 ASP ASP A . n A 1 156 MSE 156 2189 2189 MSE MSE A . n A 1 157 GLN 157 2190 2190 GLN GLN A . n A 1 158 MSE 158 2191 2191 MSE MSE A . n A 1 159 ARG 159 2192 2192 ARG ARG A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ARF 1 2201 1 ARF ARF A . C 2 ARF 1 2202 2 ARF ARF A . D 2 ARF 1 2203 3 ARF ARF A . E 2 ARF 1 2204 4 ARF ARF A . F 2 ARF 1 2205 5 ARF ARF A . G 2 ARF 1 2206 6 ARF ARF A . H 2 ARF 1 2207 7 ARF ARF A . I 3 UNX 1 2208 1001 UNX UNX A . J 3 UNX 1 2209 1002 UNX UNX A . K 3 UNX 1 2210 1003 UNX UNX A . L 3 UNX 1 2211 1004 UNX UNX A . M 3 UNX 1 2212 1005 UNX UNX A . N 4 HOH 1 2301 1 HOH HOH A . N 4 HOH 2 2302 2 HOH HOH A . N 4 HOH 3 2303 3 HOH HOH A . N 4 HOH 4 2304 4 HOH HOH A . N 4 HOH 5 2305 5 HOH HOH A . N 4 HOH 6 2306 6 HOH HOH A . N 4 HOH 7 2307 7 HOH HOH A . N 4 HOH 8 2308 8 HOH HOH A . N 4 HOH 9 2309 9 HOH HOH A . N 4 HOH 10 2310 10 HOH HOH A . N 4 HOH 11 2311 11 HOH HOH A . N 4 HOH 12 2312 12 HOH HOH A . N 4 HOH 13 2313 13 HOH HOH A . N 4 HOH 14 2314 14 HOH HOH A . N 4 HOH 15 2315 15 HOH HOH A . N 4 HOH 16 2316 16 HOH HOH A . N 4 HOH 17 2317 17 HOH HOH A . N 4 HOH 18 2318 18 HOH HOH A . N 4 HOH 19 2319 19 HOH HOH A . N 4 HOH 20 2320 20 HOH HOH A . N 4 HOH 21 2321 21 HOH HOH A . N 4 HOH 22 2322 22 HOH HOH A . N 4 HOH 23 2323 23 HOH HOH A . N 4 HOH 24 2324 24 HOH HOH A . N 4 HOH 25 2325 25 HOH HOH A . N 4 HOH 26 2326 26 HOH HOH A . N 4 HOH 27 2327 27 HOH HOH A . N 4 HOH 28 2328 28 HOH HOH A . N 4 HOH 29 2329 29 HOH HOH A . N 4 HOH 30 2330 30 HOH HOH A . N 4 HOH 31 2331 31 HOH HOH A . N 4 HOH 32 2332 32 HOH HOH A . N 4 HOH 33 2333 33 HOH HOH A . N 4 HOH 34 2334 34 HOH HOH A . N 4 HOH 35 2335 35 HOH HOH A . N 4 HOH 36 2336 36 HOH HOH A . N 4 HOH 37 2337 37 HOH HOH A . N 4 HOH 38 2338 38 HOH HOH A . N 4 HOH 39 2339 39 HOH HOH A . N 4 HOH 40 2340 40 HOH HOH A . N 4 HOH 41 2341 41 HOH HOH A . N 4 HOH 42 2342 42 HOH HOH A . N 4 HOH 43 2343 43 HOH HOH A . N 4 HOH 44 2344 44 HOH HOH A . N 4 HOH 45 2345 45 HOH HOH A . N 4 HOH 46 2346 46 HOH HOH A . N 4 HOH 47 2347 47 HOH HOH A . N 4 HOH 48 2348 48 HOH HOH A . N 4 HOH 49 2349 49 HOH HOH A . N 4 HOH 50 2350 50 HOH HOH A . N 4 HOH 51 2351 51 HOH HOH A . N 4 HOH 52 2352 52 HOH HOH A . N 4 HOH 53 2353 53 HOH HOH A . N 4 HOH 54 2354 54 HOH HOH A . N 4 HOH 55 2355 55 HOH HOH A . N 4 HOH 56 2356 56 HOH HOH A . N 4 HOH 57 2357 57 HOH HOH A . N 4 HOH 58 2358 58 HOH HOH A . N 4 HOH 59 2359 59 HOH HOH A . N 4 HOH 60 2360 60 HOH HOH A . N 4 HOH 61 2361 61 HOH HOH A . N 4 HOH 62 2362 62 HOH HOH A . N 4 HOH 63 2363 63 HOH HOH A . N 4 HOH 64 2364 64 HOH HOH A . N 4 HOH 65 2365 65 HOH HOH A . N 4 HOH 66 2366 66 HOH HOH A . N 4 HOH 67 2367 67 HOH HOH A . N 4 HOH 68 2368 68 HOH HOH A . N 4 HOH 69 2369 69 HOH HOH A . N 4 HOH 70 2370 70 HOH HOH A . N 4 HOH 71 2371 71 HOH HOH A . N 4 HOH 72 2372 72 HOH HOH A . N 4 HOH 73 2373 73 HOH HOH A . N 4 HOH 74 2374 74 HOH HOH A . N 4 HOH 75 2375 75 HOH HOH A . N 4 HOH 76 2376 76 HOH HOH A . N 4 HOH 77 2377 77 HOH HOH A . N 4 HOH 78 2378 78 HOH HOH A . N 4 HOH 79 2379 79 HOH HOH A . N 4 HOH 80 2380 80 HOH HOH A . N 4 HOH 81 2381 81 HOH HOH A . N 4 HOH 82 2382 82 HOH HOH A . N 4 HOH 83 2383 83 HOH HOH A . N 4 HOH 84 2384 84 HOH HOH A . N 4 HOH 85 2385 85 HOH HOH A . N 4 HOH 86 2386 86 HOH HOH A . N 4 HOH 87 2387 87 HOH HOH A . N 4 HOH 88 2388 88 HOH HOH A . N 4 HOH 89 2389 89 HOH HOH A . N 4 HOH 90 2390 90 HOH HOH A . N 4 HOH 91 2391 91 HOH HOH A . N 4 HOH 92 2392 92 HOH HOH A . N 4 HOH 93 2393 93 HOH HOH A . N 4 HOH 94 2394 94 HOH HOH A . N 4 HOH 95 2395 95 HOH HOH A . N 4 HOH 96 2396 96 HOH HOH A . N 4 HOH 97 2397 97 HOH HOH A . N 4 HOH 98 2398 98 HOH HOH A . N 4 HOH 99 2399 99 HOH HOH A . N 4 HOH 100 2400 100 HOH HOH A . N 4 HOH 101 2401 101 HOH HOH A . N 4 HOH 102 2402 102 HOH HOH A . N 4 HOH 103 2403 103 HOH HOH A . N 4 HOH 104 2404 104 HOH HOH A . N 4 HOH 105 2405 105 HOH HOH A . N 4 HOH 106 2406 106 HOH HOH A . N 4 HOH 107 2407 107 HOH HOH A . N 4 HOH 108 2408 108 HOH HOH A . N 4 HOH 109 2409 109 HOH HOH A . N 4 HOH 110 2410 110 HOH HOH A . N 4 HOH 111 2411 111 HOH HOH A . N 4 HOH 112 2412 112 HOH HOH A . N 4 HOH 113 2413 113 HOH HOH A . N 4 HOH 114 2414 114 HOH HOH A . N 4 HOH 115 2415 115 HOH HOH A . N 4 HOH 116 2416 116 HOH HOH A . N 4 HOH 117 2417 117 HOH HOH A . N 4 HOH 118 2418 118 HOH HOH A . N 4 HOH 119 2419 119 HOH HOH A . N 4 HOH 120 2420 120 HOH HOH A . N 4 HOH 121 2421 121 HOH HOH A . N 4 HOH 122 2422 122 HOH HOH A . N 4 HOH 123 2423 123 HOH HOH A . N 4 HOH 124 2424 124 HOH HOH A . N 4 HOH 125 2425 125 HOH HOH A . N 4 HOH 126 2426 126 HOH HOH A . N 4 HOH 127 2427 127 HOH HOH A . N 4 HOH 128 2428 128 HOH HOH A . N 4 HOH 129 2429 129 HOH HOH A . N 4 HOH 130 2430 130 HOH HOH A . N 4 HOH 131 2431 131 HOH HOH A . N 4 HOH 132 2432 132 HOH HOH A . N 4 HOH 133 2433 133 HOH HOH A . N 4 HOH 134 2434 134 HOH HOH A . N 4 HOH 135 2435 135 HOH HOH A . N 4 HOH 136 2436 136 HOH HOH A . N 4 HOH 137 2437 137 HOH HOH A . N 4 HOH 138 2438 138 HOH HOH A . N 4 HOH 139 2439 139 HOH HOH A . N 4 HOH 140 2440 140 HOH HOH A . N 4 HOH 141 2441 141 HOH HOH A . N 4 HOH 142 2442 142 HOH HOH A . N 4 HOH 143 2443 143 HOH HOH A . N 4 HOH 144 2444 144 HOH HOH A . N 4 HOH 145 2445 145 HOH HOH A . N 4 HOH 146 2446 146 HOH HOH A . N 4 HOH 147 2447 147 HOH HOH A . N 4 HOH 148 2448 148 HOH HOH A . N 4 HOH 149 2449 149 HOH HOH A . N 4 HOH 150 2450 150 HOH HOH A . N 4 HOH 151 2451 151 HOH HOH A . N 4 HOH 152 2452 152 HOH HOH A . N 4 HOH 153 2453 153 HOH HOH A . N 4 HOH 154 2454 154 HOH HOH A . N 4 HOH 155 2455 155 HOH HOH A . N 4 HOH 156 2456 156 HOH HOH A . N 4 HOH 157 2457 157 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 75 A MSE 2108 ? MET SELENOMETHIONINE 2 A MSE 110 A MSE 2143 ? MET SELENOMETHIONINE 3 A MSE 141 A MSE 2174 ? MET SELENOMETHIONINE 4 A MSE 156 A MSE 2189 ? MET SELENOMETHIONINE 5 A MSE 158 A MSE 2191 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2359 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id N _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-07 2 'Structure model' 1 1 2017-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.name' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.640 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 20328 _diffrn_reflns.pdbx_Rmerge_I_obs 0.047 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.05 _diffrn_reflns.pdbx_redundancy 16.10 _diffrn_reflns.pdbx_rejects ? _diffrn_reflns.pdbx_percent_possible_obs 99.90 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.number 327384 _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.45 50.00 ? ? 0.025 ? 1.155 14.80 ? 1 3.53 4.45 ? ? 0.028 ? 1.476 16.30 ? 1 3.09 3.53 ? ? 0.030 ? 1.509 16.40 ? 1 2.80 3.09 ? ? 0.037 ? 1.335 16.50 ? 1 2.60 2.80 ? ? 0.047 ? 1.197 16.50 ? 1 2.45 2.60 ? ? 0.055 ? 1.120 16.50 ? 1 2.33 2.45 ? ? 0.067 ? 1.077 16.40 ? 1 2.23 2.33 ? ? 0.078 ? 1.152 16.40 ? 1 2.14 2.23 ? ? 0.092 ? 1.076 16.40 ? 1 2.07 2.14 ? ? 0.102 ? 1.067 16.30 ? 1 2.00 2.07 ? ? 0.132 ? 1.044 16.20 ? 1 1.94 2.00 ? ? 0.158 ? 1.011 16.10 ? 1 1.89 1.94 ? ? 0.181 ? 0.970 16.10 ? 1 1.85 1.89 ? ? 0.240 ? 0.912 16.10 ? 1 1.81 1.85 ? ? 0.307 ? 0.849 16.00 ? 1 1.77 1.81 ? ? 0.358 ? 0.808 16.00 ? 1 1.73 1.77 ? ? 0.440 ? 0.819 15.90 ? 1 1.70 1.73 ? ? 0.553 ? 0.812 15.80 ? 1 1.67 1.70 ? ? 0.643 ? 0.786 15.70 ? 1 1.64 1.67 ? ? 0.775 ? 0.774 15.80 ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC 5.8.0073 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 7 SOLVE '2 .13' ? ? ? ? phasing ? ? ? 8 RESOLVE '2 .13' ? ? ? ? phasing ? ? ? 9 Coot 0.7.2 ? ? ? ? 'model building' ? ? ? 10 ARP/wARP 7.4.0 ? ? ? ? 'model building' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 2085 ? ? -152.21 52.75 2 1 HIS A 2120 ? ? -161.28 118.44 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 2146 ? NE ? A ARG 113 NE 2 1 Y 1 A ARG 2146 ? CZ ? A ARG 113 CZ 3 1 Y 1 A ARG 2146 ? NH1 ? A ARG 113 NH1 4 1 Y 1 A ARG 2146 ? NH2 ? A ARG 113 NH2 5 1 Y 1 A GLU 2155 ? CG ? A GLU 122 CG 6 1 Y 1 A GLU 2155 ? CD ? A GLU 122 CD 7 1 Y 1 A GLU 2155 ? OE1 ? A GLU 122 OE1 8 1 Y 1 A GLU 2155 ? OE2 ? A GLU 122 OE2 9 1 Y 1 A LYS 2158 ? CE ? A LYS 125 CE 10 1 Y 1 A LYS 2158 ? NZ ? A LYS 125 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 FORMAMIDE ARF 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH #