HEADER TRANSPORT PROTEIN 07-JUL-14 4QT6 TITLE CRYSTAL STRUCTURE OF THE SPRY DOMAIN OF HUMAN HERC1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE E3 UBIQUITIN-PROTEIN LIGASE HERC1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SPRY DOMAIN (UNP RESIDUES 2035-2192); COMPND 5 SYNONYM: HECT DOMAIN AND RCC1-LIKE DOMAIN-CONTAINING PROTEIN 1, P532, COMPND 6 P619; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HERC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-V2R; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS SPRY, B30.2, HERC1, E3 UBIQUITIN LIGASE, STRUCTURAL GENOMICS, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,J.HU,X.GUAN,A.WERNIMONT,Y.LI,C.BOUNTRA,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,Y.TONG,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 22-NOV-17 4QT6 1 REMARK REVDAT 1 07-JAN-15 4QT6 0 JRNL AUTH J.HU,A.DONG,X.GUAN,A.WERNIMONT,Y.LI,C.BOUNTRA, JRNL AUTH 2 C.H.ARROWSMITH,A.M.EDWARDS,Y.TONG JRNL TITL CRYSTAL STRUCTURE OF THE SPRY DOMAIN OF HUMAN HERC1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 20208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 637 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1447 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1233 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.093 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.693 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1360 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1222 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1843 ; 1.433 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2819 ; 0.744 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 179 ; 6.794 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 66 ;38.193 ;24.697 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 202 ;10.580 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;21.229 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 190 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1636 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 374 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 682 ; 1.294 ; 2.325 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 682 ; 1.294 ; 2.325 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 852 ; 1.951 ; 3.456 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QT6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086481. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5406 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VERIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20404 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 27.80 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 80.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 27.20 REMARK 200 R MERGE FOR SHELL (I) : 0.86400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE 2 .13, RESOLVE 2 .13 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 UL PROTEIN (MIXED 1:700 W/W REMARK 280 CHYMOTRYPSIN:PROTEIN BEFORE SETUP) + 0.5 UL WELL SOLUTION (16% W/ REMARK 280 V PEG 8000, 0.04 M POTASSIUM PHOSPHATE MONOBASIC, 20% V/V REMARK 280 GLYCEROL) + 0.1 UL 40% FORMAMIDE (4% FINAL CONCENTRATION), VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 49.86500 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 49.86500 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 49.86500 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 49.86500 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 49.86500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 49.86500 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 49.86500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 49.86500 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 49.86500 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 49.86500 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 49.86500 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 49.86500 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 49.86500 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 49.86500 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 49.86500 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 49.86500 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 49.86500 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 49.86500 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 49.86500 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 49.86500 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 49.86500 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 49.86500 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 49.86500 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 49.86500 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 49.86500 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 49.86500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2359 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A2146 NE CZ NH1 NH2 REMARK 470 GLU A2155 CG CD OE1 OE2 REMARK 470 LYS A2158 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A2085 52.75 -152.21 REMARK 500 HIS A2120 118.44 -161.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARF A 2201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARF A 2202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARF A 2203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARF A 2204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARF A 2205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARF A 2206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ARF A 2207 DBREF 4QT6 A 2035 2192 UNP Q15751 HERC1_HUMAN 2035 2192 SEQADV 4QT6 GLY A 2034 UNP Q15751 EXPRESSION TAG SEQRES 1 A 159 GLY PHE ASP PRO GLU LYS ALA GLN CYS CYS LEU VAL GLU SEQRES 2 A 159 ASN GLY GLN ILE LEU THR HIS GLY SER GLY GLY LYS GLY SEQRES 3 A 159 TYR GLY LEU ALA SER THR GLY VAL THR SER GLY CYS TYR SEQRES 4 A 159 GLN TRP LYS PHE TYR ILE VAL LYS GLU ASN ARG GLY ASN SEQRES 5 A 159 GLU GLY THR CYS VAL GLY VAL SER ARG TRP PRO VAL HIS SEQRES 6 A 159 ASP PHE ASN HIS ARG THR THR SER ASP MSE TRP LEU TYR SEQRES 7 A 159 ARG ALA TYR SER GLY ASN LEU TYR HIS ASN GLY GLU GLN SEQRES 8 A 159 THR LEU THR LEU SER SER PHE THR GLN GLY ASP PHE ILE SEQRES 9 A 159 THR CYS VAL LEU ASP MSE GLU ALA ARG THR ILE SER PHE SEQRES 10 A 159 GLY LYS ASN GLY GLU GLU PRO LYS LEU ALA PHE GLU ASP SEQRES 11 A 159 VAL ASP ALA ALA GLU LEU TYR PRO CYS VAL MSE PHE TYR SEQRES 12 A 159 SER SER ASN PRO GLY GLU LYS VAL LYS ILE CYS ASP MSE SEQRES 13 A 159 GLN MSE ARG MODRES 4QT6 MSE A 2108 MET SELENOMETHIONINE MODRES 4QT6 MSE A 2143 MET SELENOMETHIONINE MODRES 4QT6 MSE A 2174 MET SELENOMETHIONINE MODRES 4QT6 MSE A 2189 MET SELENOMETHIONINE MODRES 4QT6 MSE A 2191 MET SELENOMETHIONINE HET MSE A2108 8 HET MSE A2143 8 HET MSE A2174 14 HET MSE A2189 16 HET MSE A2191 14 HET ARF A2201 3 HET ARF A2202 6 HET ARF A2203 3 HET ARF A2204 3 HET ARF A2205 3 HET ARF A2206 3 HET ARF A2207 3 HET UNX A2208 1 HET UNX A2209 1 HET UNX A2210 1 HET UNX A2211 1 HET UNX A2212 1 HETNAM MSE SELENOMETHIONINE HETNAM ARF FORMAMIDE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 ARF 7(C H3 N O) FORMUL 9 UNX 5(X) FORMUL 14 HOH *157(H2 O) SHEET 1 A 7 PHE A2035 GLN A2041 0 SHEET 2 A 7 GLY A2059 ALA A2063 -1 O TYR A2060 N GLN A2041 SHEET 3 A 7 TYR A2170 PHE A2175 -1 O PHE A2175 N GLY A2059 SHEET 4 A 7 THR A2088 SER A2093 -1 N CYS A2089 O MSE A2174 SHEET 5 A 7 MSE A2108 ARG A2112 -1 O TRP A2109 N VAL A2092 SHEET 6 A 7 ASN A2117 TYR A2119 -1 O ASN A2117 N ARG A2112 SHEET 7 A 7 GLU A2123 THR A2127 -1 O GLN A2124 N LEU A2118 SHEET 1 B 7 CYS A2043 GLU A2046 0 SHEET 2 B 7 ILE A2050 HIS A2053 -1 O THR A2052 N LEU A2044 SHEET 3 B 7 LYS A2183 CYS A2187 -1 O VAL A2184 N LEU A2051 SHEET 4 B 7 CYS A2071 LYS A2080 -1 N TYR A2077 O LYS A2185 SHEET 5 B 7 PHE A2136 ASP A2142 -1 O CYS A2139 N TRP A2074 SHEET 6 B 7 THR A2147 LYS A2152 -1 O THR A2147 N ASP A2142 SHEET 7 B 7 LYS A2158 PHE A2161 -1 O ALA A2160 N ILE A2148 LINK C ASP A2107 N MSE A2108 1555 1555 1.33 LINK C MSE A2108 N TRP A2109 1555 1555 1.31 LINK C ASP A2142 N MSE A2143 1555 1555 1.33 LINK C MSE A2143 N GLU A2144 1555 1555 1.33 LINK C VAL A2173 N AMSE A2174 1555 1555 1.33 LINK C VAL A2173 N BMSE A2174 1555 1555 1.33 LINK C MSE A2174 N PHE A2175 1555 1555 1.33 LINK C ASP A2188 N AMSE A2189 1555 1555 1.33 LINK C ASP A2188 N BMSE A2189 1555 1555 1.33 LINK C AMSE A2189 N GLN A2190 1555 1555 1.33 LINK C BMSE A2189 N GLN A2190 1555 1555 1.32 LINK C GLN A2190 N AMSE A2191 1555 1555 1.33 LINK C GLN A2190 N BMSE A2191 1555 1555 1.32 LINK C MSE A2191 N ARG A2192 1555 1555 1.33 CISPEP 1 TRP A 2095 PRO A 2096 0 1.92 SITE 1 AC1 5 ASN A2085 GLU A2086 ARG A2112 TYR A2114 SITE 2 AC1 5 TYR A2176 SITE 1 AC2 7 TYR A2111 LEU A2128 SER A2129 PHE A2150 SITE 2 AC2 7 LYS A2152 LYS A2158 HOH A2443 SITE 1 AC3 6 THR A2065 TYR A2072 ARF A2207 HOH A2385 SITE 2 AC3 6 HOH A2389 HOH A2438 SITE 1 AC4 5 PHE A2136 ALA A2166 ALA A2167 GLU A2168 SITE 2 AC4 5 ARG A2192 SITE 1 AC5 5 GLY A2034 TYR A2072 ILE A2186 HOH A2334 SITE 2 AC5 5 HOH A2385 SITE 1 AC6 4 ASN A2085 GLU A2086 SER A2177 HOH A2309 SITE 1 AC7 6 CYS A2042 LEU A2044 GLY A2054 SER A2055 SITE 2 AC7 6 ARF A2203 HOH A2438 CRYST1 99.730 99.730 99.730 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010027 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010027 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010027 0.00000