HEADER HYDROLASE 07-JUL-14 4QT9 TITLE CRYSTAL STRUCTURE OF A PUTATIVE GLUCOAMYLASE (BACCAC_03554) FROM TITLE 2 BACTEROIDES CACCAE ATCC 43185 AT 2.05 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE GLUCOAMYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES CACCAE ATCC 43185; SOURCE 3 ORGANISM_TAXID: 411901; SOURCE 4 GENE: BACCAC_03554; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF10091 FAMILY, ALPHA/ALPHA TOROID FOLD, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4QT9 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 4QT9 1 JRNL REVDAT 2 22-NOV-17 4QT9 1 REMARK REVDAT 1 06-AUG-14 4QT9 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE GLUCOAMYLASE (BACCAC_03554) JRNL TITL 2 FROM BACTEROIDES CACCAE ATCC 43185 AT 2.05 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 54483 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2765 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.10 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.92 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3525 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2058 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3359 REMARK 3 BIN R VALUE (WORKING SET) : 0.2037 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.71 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 166 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6640 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 481 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.87150 REMARK 3 B22 (A**2) : 0.56140 REMARK 3 B33 (A**2) : 1.31010 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.253 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7036 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9603 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3100 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 165 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1070 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7036 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 838 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8581 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.92 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.34 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.92 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|47 - 460 } REMARK 3 ORIGIN FOR THE GROUP (A): 75.9103 18.9273 47.4871 REMARK 3 T TENSOR REMARK 3 T11: -0.1671 T22: 0.2261 REMARK 3 T33: -0.1617 T12: -0.0033 REMARK 3 T13: 0.0028 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.7671 L22: 0.2063 REMARK 3 L33: 1.1591 L12: 0.0489 REMARK 3 L13: 0.1883 L23: 0.0512 REMARK 3 S TENSOR REMARK 3 S11: 0.0298 S12: -0.0022 S13: 0.0330 REMARK 3 S21: -0.0073 S22: -0.0150 S23: 0.0030 REMARK 3 S31: -0.0420 S32: -0.0394 S33: -0.0148 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|48 - 460 } REMARK 3 ORIGIN FOR THE GROUP (A): 105.4030 18.9997 88.6102 REMARK 3 T TENSOR REMARK 3 T11: -0.1548 T22: 0.2350 REMARK 3 T33: -0.1555 T12: 0.0022 REMARK 3 T13: 0.0049 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.7216 L22: 0.1475 REMARK 3 L33: 0.8936 L12: -0.0170 REMARK 3 L13: 0.0036 L23: -0.0487 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: -0.0194 S13: 0.0422 REMARK 3 S21: 0.0054 S22: -0.0247 S23: 0.0049 REMARK 3 S31: -0.0612 S32: 0.0628 S33: -0.0045 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE EXPERIMENTAL (MAD) PHASES WERE USED AS REMARK 3 RESTRAINTS DURING REF 4. NCS RESTRAINTS WERE APPLIED USING REMARK 3 BUSTER'S LSSR RESTRAINT REPRESENTATION (-AUTONCS). 5. ACETATE REMARK 3 (ACT) AND TRIS BASE (TRS) FROM THE CRYSTALLIZATION SOLUT HAVE REMARK 3 BEEN MODELED IN THE SOLVENT STRUCTURE. REMARK 4 REMARK 4 4QT9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97886,0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE JULY 4, 2012 REMARK 200 BUILT=20130617 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54536 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 47.614 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.96700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM ACETATE, 30.0% REMARK 280 POLYETHYLENE GLYCOL 4000, 0.1M TRIS HYDROCHLORIDE PH 8.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 58.96250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.36400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 58.96250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.36400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 698 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 30 REMARK 465 SER A 31 REMARK 465 CYS A 32 REMARK 465 LYS A 33 REMARK 465 GLY A 34 REMARK 465 LYS A 35 REMARK 465 SER A 36 REMARK 465 SER A 37 REMARK 465 SER A 38 REMARK 465 ASN A 39 REMARK 465 LEU A 40 REMARK 465 THR A 41 REMARK 465 ALA A 42 REMARK 465 ALA A 43 REMARK 465 THR A 44 REMARK 465 ASP A 45 REMARK 465 SER A 46 REMARK 465 LYS A 461 REMARK 465 GLN A 462 REMARK 465 ASP A 463 REMARK 465 VAL A 464 REMARK 465 ARG A 465 REMARK 465 GLN A 466 REMARK 465 GLN A 467 REMARK 465 GLY B 0 REMARK 465 GLN B 30 REMARK 465 SER B 31 REMARK 465 CYS B 32 REMARK 465 LYS B 33 REMARK 465 GLY B 34 REMARK 465 LYS B 35 REMARK 465 SER B 36 REMARK 465 SER B 37 REMARK 465 SER B 38 REMARK 465 ASN B 39 REMARK 465 LEU B 40 REMARK 465 THR B 41 REMARK 465 ALA B 42 REMARK 465 ALA B 43 REMARK 465 THR B 44 REMARK 465 ASP B 45 REMARK 465 SER B 46 REMARK 465 LEU B 47 REMARK 465 LYS B 461 REMARK 465 GLN B 462 REMARK 465 ASP B 463 REMARK 465 VAL B 464 REMARK 465 ARG B 465 REMARK 465 GLN B 466 REMARK 465 GLN B 467 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 460 CG OD1 ND2 REMARK 470 ASN B 460 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 268 76.01 -151.46 REMARK 500 SER A 311 107.06 -164.74 REMARK 500 ASP B 227 64.72 32.14 REMARK 500 SER B 268 75.53 -151.76 REMARK 500 SER B 311 107.53 -163.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-418985 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (30-467) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4QT9 A 30 467 UNP A5ZKV7 A5ZKV7_9BACE 30 467 DBREF 4QT9 B 30 467 UNP A5ZKV7 A5ZKV7_9BACE 30 467 SEQADV 4QT9 GLY A 0 UNP A5ZKV7 EXPRESSION TAG SEQADV 4QT9 GLY B 0 UNP A5ZKV7 EXPRESSION TAG SEQRES 1 A 439 GLY GLN SER CYS LYS GLY LYS SER SER SER ASN LEU THR SEQRES 2 A 439 ALA ALA THR ASP SER LEU SER ASP ASP ALA LEU MSE ASP SEQRES 3 A 439 THR VAL GLN ARG ARG THR PHE LEU TYR PHE TRP GLU GLY SEQRES 4 A 439 ALA GLU PRO ASN SER GLY LEU ALA PRO GLU ARG TYR HIS SEQRES 5 A 439 VAL ASP GLY VAL TYR PRO GLN ASN ASP ALA ASN VAL VAL SEQRES 6 A 439 THR SER GLY GLY SER GLY PHE GLY ILE MSE ALA ILE LEU SEQRES 7 A 439 ALA GLY ILE ASP ARG GLY TYR VAL THR ARG GLU GLU GLY SEQRES 8 A 439 LEU ALA ARG MSE GLU ARG ILE VAL SER PHE LEU GLU LYS SEQRES 9 A 439 ALA ASP ARG PHE HIS GLY ALA TYR PRO HIS TRP TRP TYR SEQRES 10 A 439 GLY ASP THR GLY LYS VAL LYS PRO PHE GLY GLN LYS ASP SEQRES 11 A 439 ASN GLY GLY ASP LEU VAL GLU THR ALA PHE LEU MSE GLN SEQRES 12 A 439 GLY LEU LEU ALA VAL HIS GLN TYR TYR ALA ASN GLY ASN SEQRES 13 A 439 ASP LYS GLU LYS ALA ILE ALA GLN ARG ILE ASP ARG LEU SEQRES 14 A 439 TRP ARG GLU VAL ASP TRP ASP TRP TYR ARG LYS GLY GLY SEQRES 15 A 439 GLN ASN VAL LEU TYR TRP HIS TRP SER PRO THR TYR GLY SEQRES 16 A 439 TRP GLU MSE ASP PHE PRO ILE HIS GLY TYR ASN GLU CYS SEQRES 17 A 439 MSE ILE MSE TYR ILE LEU ALA ALA ALA SER PRO THR HIS SEQRES 18 A 439 GLY VAL PRO ALA ALA VAL TYR HIS ASP GLY TRP ALA GLN SEQRES 19 A 439 ASN GLY ALA ILE VAL SER PRO HIS LYS VAL GLU GLY ILE SEQRES 20 A 439 GLU LEU HIS LEU ARG TYR GLN GLY THR GLU ALA GLY PRO SEQRES 21 A 439 LEU PHE TRP ALA GLN TYR SER PHE LEU GLY LEU ASP PRO SEQRES 22 A 439 VAL GLY LEU LYS ASP GLU TYR CYS PRO SER TYR PHE HIS SEQRES 23 A 439 GLU MSE ARG ASN LEU THR LEU VAL ASN ARG ALA TYR CYS SEQRES 24 A 439 ILE ARG ASN PRO LYS HIS TYR LYS GLY PHE GLY PRO ASP SEQRES 25 A 439 CYS TRP GLY LEU THR ALA SER TYR SER VAL ASP GLY TYR SEQRES 26 A 439 ALA ALA HIS SER PRO ASN GLU GLN ASP ASP LYS GLY VAL SEQRES 27 A 439 ILE SER PRO THR ALA ALA LEU SER SER ILE VAL TYR THR SEQRES 28 A 439 PRO GLU TYR SER LEU GLN VAL MSE ARG HIS LEU TYR ASN SEQRES 29 A 439 MSE GLY ASP LYS VAL PHE GLY PRO PHE GLY PHE TYR ASP SEQRES 30 A 439 ALA PHE SER GLU THR ASP ASN TRP TYR PRO GLN ARG TYR SEQRES 31 A 439 LEU ALA ILE ASP GLN GLY PRO ILE ALA VAL MSE ILE GLU SEQRES 32 A 439 ASN TYR ARG THR GLY LEU LEU TRP LYS LEU PHE MSE SER SEQRES 33 A 439 HIS PRO ASP VAL GLN ALA GLY LEU THR LYS LEU GLY PHE SEQRES 34 A 439 ASN THR ASN LYS GLN ASP VAL ARG GLN GLN SEQRES 1 B 439 GLY GLN SER CYS LYS GLY LYS SER SER SER ASN LEU THR SEQRES 2 B 439 ALA ALA THR ASP SER LEU SER ASP ASP ALA LEU MSE ASP SEQRES 3 B 439 THR VAL GLN ARG ARG THR PHE LEU TYR PHE TRP GLU GLY SEQRES 4 B 439 ALA GLU PRO ASN SER GLY LEU ALA PRO GLU ARG TYR HIS SEQRES 5 B 439 VAL ASP GLY VAL TYR PRO GLN ASN ASP ALA ASN VAL VAL SEQRES 6 B 439 THR SER GLY GLY SER GLY PHE GLY ILE MSE ALA ILE LEU SEQRES 7 B 439 ALA GLY ILE ASP ARG GLY TYR VAL THR ARG GLU GLU GLY SEQRES 8 B 439 LEU ALA ARG MSE GLU ARG ILE VAL SER PHE LEU GLU LYS SEQRES 9 B 439 ALA ASP ARG PHE HIS GLY ALA TYR PRO HIS TRP TRP TYR SEQRES 10 B 439 GLY ASP THR GLY LYS VAL LYS PRO PHE GLY GLN LYS ASP SEQRES 11 B 439 ASN GLY GLY ASP LEU VAL GLU THR ALA PHE LEU MSE GLN SEQRES 12 B 439 GLY LEU LEU ALA VAL HIS GLN TYR TYR ALA ASN GLY ASN SEQRES 13 B 439 ASP LYS GLU LYS ALA ILE ALA GLN ARG ILE ASP ARG LEU SEQRES 14 B 439 TRP ARG GLU VAL ASP TRP ASP TRP TYR ARG LYS GLY GLY SEQRES 15 B 439 GLN ASN VAL LEU TYR TRP HIS TRP SER PRO THR TYR GLY SEQRES 16 B 439 TRP GLU MSE ASP PHE PRO ILE HIS GLY TYR ASN GLU CYS SEQRES 17 B 439 MSE ILE MSE TYR ILE LEU ALA ALA ALA SER PRO THR HIS SEQRES 18 B 439 GLY VAL PRO ALA ALA VAL TYR HIS ASP GLY TRP ALA GLN SEQRES 19 B 439 ASN GLY ALA ILE VAL SER PRO HIS LYS VAL GLU GLY ILE SEQRES 20 B 439 GLU LEU HIS LEU ARG TYR GLN GLY THR GLU ALA GLY PRO SEQRES 21 B 439 LEU PHE TRP ALA GLN TYR SER PHE LEU GLY LEU ASP PRO SEQRES 22 B 439 VAL GLY LEU LYS ASP GLU TYR CYS PRO SER TYR PHE HIS SEQRES 23 B 439 GLU MSE ARG ASN LEU THR LEU VAL ASN ARG ALA TYR CYS SEQRES 24 B 439 ILE ARG ASN PRO LYS HIS TYR LYS GLY PHE GLY PRO ASP SEQRES 25 B 439 CYS TRP GLY LEU THR ALA SER TYR SER VAL ASP GLY TYR SEQRES 26 B 439 ALA ALA HIS SER PRO ASN GLU GLN ASP ASP LYS GLY VAL SEQRES 27 B 439 ILE SER PRO THR ALA ALA LEU SER SER ILE VAL TYR THR SEQRES 28 B 439 PRO GLU TYR SER LEU GLN VAL MSE ARG HIS LEU TYR ASN SEQRES 29 B 439 MSE GLY ASP LYS VAL PHE GLY PRO PHE GLY PHE TYR ASP SEQRES 30 B 439 ALA PHE SER GLU THR ASP ASN TRP TYR PRO GLN ARG TYR SEQRES 31 B 439 LEU ALA ILE ASP GLN GLY PRO ILE ALA VAL MSE ILE GLU SEQRES 32 B 439 ASN TYR ARG THR GLY LEU LEU TRP LYS LEU PHE MSE SER SEQRES 33 B 439 HIS PRO ASP VAL GLN ALA GLY LEU THR LYS LEU GLY PHE SEQRES 34 B 439 ASN THR ASN LYS GLN ASP VAL ARG GLN GLN MODRES 4QT9 MSE A 53 MET SELENOMETHIONINE MODRES 4QT9 MSE A 103 MET SELENOMETHIONINE MODRES 4QT9 MSE A 123 MET SELENOMETHIONINE MODRES 4QT9 MSE A 170 MET SELENOMETHIONINE MODRES 4QT9 MSE A 226 MET SELENOMETHIONINE MODRES 4QT9 MSE A 237 MET SELENOMETHIONINE MODRES 4QT9 MSE A 239 MET SELENOMETHIONINE MODRES 4QT9 MSE A 316 MET SELENOMETHIONINE MODRES 4QT9 MSE A 387 MET SELENOMETHIONINE MODRES 4QT9 MSE A 393 MET SELENOMETHIONINE MODRES 4QT9 MSE A 429 MET SELENOMETHIONINE MODRES 4QT9 MSE A 443 MET SELENOMETHIONINE MODRES 4QT9 MSE B 53 MET SELENOMETHIONINE MODRES 4QT9 MSE B 103 MET SELENOMETHIONINE MODRES 4QT9 MSE B 123 MET SELENOMETHIONINE MODRES 4QT9 MSE B 170 MET SELENOMETHIONINE MODRES 4QT9 MSE B 226 MET SELENOMETHIONINE MODRES 4QT9 MSE B 237 MET SELENOMETHIONINE MODRES 4QT9 MSE B 239 MET SELENOMETHIONINE MODRES 4QT9 MSE B 316 MET SELENOMETHIONINE MODRES 4QT9 MSE B 387 MET SELENOMETHIONINE MODRES 4QT9 MSE B 393 MET SELENOMETHIONINE MODRES 4QT9 MSE B 429 MET SELENOMETHIONINE MODRES 4QT9 MSE B 443 MET SELENOMETHIONINE HET MSE A 53 8 HET MSE A 103 8 HET MSE A 123 8 HET MSE A 170 8 HET MSE A 226 8 HET MSE A 237 8 HET MSE A 239 8 HET MSE A 316 8 HET MSE A 387 8 HET MSE A 393 8 HET MSE A 429 8 HET MSE A 443 8 HET MSE B 53 8 HET MSE B 103 8 HET MSE B 123 8 HET MSE B 170 8 HET MSE B 226 8 HET MSE B 237 8 HET MSE B 239 8 HET MSE B 316 8 HET MSE B 387 8 HET MSE B 393 8 HET MSE B 429 8 HET MSE B 443 8 HET ACT A 501 4 HET ACT A 502 4 HET ACT B 501 4 HET ACT B 502 4 HET TRS B 503 8 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 1 MSE 24(C5 H11 N O2 SE) FORMUL 3 ACT 4(C2 H3 O2 1-) FORMUL 7 TRS C4 H12 N O3 1+ FORMUL 8 HOH *481(H2 O) HELIX 1 1 SER A 48 GLU A 66 1 19 HELIX 2 2 SER A 95 GLY A 112 1 18 HELIX 3 3 THR A 115 ALA A 133 1 19 HELIX 4 4 LEU A 163 ALA A 181 1 19 HELIX 5 5 ASN A 184 VAL A 201 1 18 HELIX 6 6 ASP A 202 LYS A 208 5 7 HELIX 7 7 CYS A 236 SER A 246 1 11 HELIX 8 8 PRO A 252 GLY A 259 1 8 HELIX 9 9 ALA A 261 ALA A 265 5 5 HELIX 10 10 PRO A 288 LEU A 297 5 10 HELIX 11 11 SER A 311 ASN A 330 1 20 HELIX 12 12 SER A 368 SER A 374 1 7 HELIX 13 13 THR A 379 MSE A 393 1 15 HELIX 14 14 ALA A 420 THR A 435 1 16 HELIX 15 15 GLY A 436 SER A 444 1 9 HELIX 16 16 HIS A 445 LEU A 455 1 11 HELIX 17 17 ASP B 49 GLU B 66 1 18 HELIX 18 18 SER B 95 GLY B 112 1 18 HELIX 19 19 THR B 115 ALA B 133 1 19 HELIX 20 20 LEU B 163 ALA B 181 1 19 HELIX 21 21 ASN B 184 GLU B 200 1 17 HELIX 22 22 ASP B 202 LYS B 208 5 7 HELIX 23 23 CYS B 236 SER B 246 1 11 HELIX 24 24 PRO B 252 GLY B 259 1 8 HELIX 25 25 ALA B 261 ALA B 265 5 5 HELIX 26 26 PRO B 288 LEU B 297 5 10 HELIX 27 27 SER B 311 ASN B 330 1 20 HELIX 28 28 SER B 368 SER B 374 1 7 HELIX 29 29 THR B 379 MSE B 393 1 15 HELIX 30 30 ALA B 420 THR B 435 1 16 HELIX 31 31 GLY B 436 HIS B 445 1 10 HELIX 32 32 HIS B 445 LEU B 455 1 11 SHEET 1 A 2 ARG A 78 HIS A 80 0 SHEET 2 A 2 ARG A 417 LEU A 419 -1 O TYR A 418 N TYR A 79 SHEET 1 B 3 VAL A 92 THR A 94 0 SHEET 2 B 3 TRP A 143 TYR A 145 -1 O TRP A 144 N VAL A 93 SHEET 3 B 3 VAL A 151 LYS A 152 -1 O LYS A 152 N TRP A 143 SHEET 1 C 2 GLY A 161 ASP A 162 0 SHEET 2 C 2 HIS A 217 TRP A 218 -1 O TRP A 218 N GLY A 161 SHEET 1 D 2 VAL A 267 VAL A 272 0 SHEET 2 D 2 ILE A 275 LEU A 279 -1 O LEU A 277 N HIS A 270 SHEET 1 E 2 LEU A 304 LYS A 305 0 SHEET 2 E 2 ASN A 458 THR A 459 -1 O ASN A 458 N LYS A 305 SHEET 1 F 2 ALA A 346 SER A 349 0 SHEET 2 F 2 GLY A 352 ALA A 355 -1 O ALA A 354 N SER A 347 SHEET 1 G 2 PHE A 398 GLY A 399 0 SHEET 2 G 2 GLY A 402 PHE A 403 -1 O GLY A 402 N GLY A 399 SHEET 1 H 2 ARG B 78 HIS B 80 0 SHEET 2 H 2 ARG B 417 LEU B 419 -1 O TYR B 418 N TYR B 79 SHEET 1 I 2 VAL B 92 THR B 94 0 SHEET 2 I 2 TRP B 143 TYR B 145 -1 O TRP B 144 N VAL B 93 SHEET 1 J 2 GLY B 161 ASP B 162 0 SHEET 2 J 2 HIS B 217 TRP B 218 -1 O TRP B 218 N GLY B 161 SHEET 1 K 2 VAL B 267 VAL B 272 0 SHEET 2 K 2 ILE B 275 LEU B 279 -1 O LEU B 277 N HIS B 270 SHEET 1 L 2 LEU B 304 LYS B 305 0 SHEET 2 L 2 ASN B 458 THR B 459 -1 O ASN B 458 N LYS B 305 SHEET 1 M 2 ALA B 346 SER B 349 0 SHEET 2 M 2 GLY B 352 ALA B 355 -1 O ALA B 354 N SER B 347 SHEET 1 N 2 PHE B 398 GLY B 399 0 SHEET 2 N 2 GLY B 402 PHE B 403 -1 O GLY B 402 N GLY B 399 LINK C LEU A 52 N MSE A 53 1555 1555 1.34 LINK C MSE A 53 N ASP A 54 1555 1555 1.35 LINK C ILE A 102 N MSE A 103 1555 1555 1.37 LINK C MSE A 103 N ALA A 104 1555 1555 1.33 LINK C ARG A 122 N MSE A 123 1555 1555 1.36 LINK C MSE A 123 N GLU A 124 1555 1555 1.35 LINK C LEU A 169 N MSE A 170 1555 1555 1.36 LINK C MSE A 170 N GLN A 171 1555 1555 1.34 LINK C GLU A 225 N MSE A 226 1555 1555 1.35 LINK C MSE A 226 N ASP A 227 1555 1555 1.34 LINK C CYS A 236 N MSE A 237 1555 1555 1.36 LINK C MSE A 237 N ILE A 238 1555 1555 1.36 LINK C ILE A 238 N MSE A 239 1555 1555 1.34 LINK C MSE A 239 N TYR A 240 1555 1555 1.35 LINK C GLU A 315 N MSE A 316 1555 1555 1.33 LINK C MSE A 316 N ARG A 317 1555 1555 1.35 LINK C VAL A 386 N MSE A 387 1555 1555 1.36 LINK C MSE A 387 N ARG A 388 1555 1555 1.34 LINK C ASN A 392 N MSE A 393 1555 1555 1.35 LINK C MSE A 393 N GLY A 394 1555 1555 1.33 LINK C VAL A 428 N MSE A 429 1555 1555 1.35 LINK C MSE A 429 N ILE A 430 1555 1555 1.38 LINK C PHE A 442 N MSE A 443 1555 1555 1.35 LINK C MSE A 443 N SER A 444 1555 1555 1.35 LINK C LEU B 52 N MSE B 53 1555 1555 1.35 LINK C MSE B 53 N ASP B 54 1555 1555 1.34 LINK C ILE B 102 N MSE B 103 1555 1555 1.35 LINK C MSE B 103 N ALA B 104 1555 1555 1.33 LINK C ARG B 122 N MSE B 123 1555 1555 1.36 LINK C MSE B 123 N GLU B 124 1555 1555 1.35 LINK C LEU B 169 N MSE B 170 1555 1555 1.36 LINK C MSE B 170 N GLN B 171 1555 1555 1.35 LINK C GLU B 225 N MSE B 226 1555 1555 1.36 LINK C MSE B 226 N ASP B 227 1555 1555 1.34 LINK C CYS B 236 N MSE B 237 1555 1555 1.34 LINK C MSE B 237 N ILE B 238 1555 1555 1.36 LINK C ILE B 238 N MSE B 239 1555 1555 1.34 LINK C MSE B 239 N TYR B 240 1555 1555 1.35 LINK C GLU B 315 N MSE B 316 1555 1555 1.34 LINK C MSE B 316 N ARG B 317 1555 1555 1.35 LINK C VAL B 386 N MSE B 387 1555 1555 1.36 LINK C MSE B 387 N ARG B 388 1555 1555 1.34 LINK C ASN B 392 N MSE B 393 1555 1555 1.35 LINK C MSE B 393 N GLY B 394 1555 1555 1.33 LINK C VAL B 428 N MSE B 429 1555 1555 1.35 LINK C MSE B 429 N ILE B 430 1555 1555 1.35 LINK C PHE B 442 N MSE B 443 1555 1555 1.35 LINK C MSE B 443 N SER B 444 1555 1555 1.34 CISPEP 1 GLY A 232 TYR A 233 0 -2.38 CISPEP 2 GLY B 232 TYR B 233 0 -2.96 SITE 1 AC1 3 GLU A 165 GLU A 235 HOH A 764 SITE 1 AC2 2 GLU A 235 HOH A 661 SITE 1 AC3 1 ARG B 125 SITE 1 AC4 2 GLU B 77 ARG B 78 SITE 1 AC5 7 HIS B 142 GLU B 165 TRP B 216 GLU B 235 SITE 2 AC5 7 PHE B 290 ILE B 421 HOH B 711 CRYST1 117.925 80.728 90.752 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008480 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012387 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011019 0.00000