HEADER TRANSFERASE/TRANSFERASE INHIBITOR 07-JUL-14 4QTC TITLE STRUCTURE OF HUMAN HASPIN (GSG2) IN COMPLEX WITH SCH772984 REVEALING TITLE 2 THE FIRST TYPE-I BINDING MODE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE HASPIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN (465-798); COMPND 5 SYNONYM: GERM CELL-SPECIFIC GENE 2 PROTEIN, H-HASPIN, HAPLOID GERM COMPND 6 CELL-SPECIFIC NUCLEAR PROTEIN KINASE; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSG2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 2 TRANSFERASE, KINASE, INHIBITOR, ALLOSTERIC, STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM (SGC), TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,F.VON DELFT,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,S.KNAPP, AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 20-SEP-23 4QTC 1 REMARK SEQADV REVDAT 2 24-SEP-14 4QTC 1 JRNL REVDAT 1 23-JUL-14 4QTC 0 JRNL AUTH A.CHAIKUAD,E.M C TACCONI,J.ZIMMER,Y.LIANG,N.S.GRAY, JRNL AUTH 2 M.TARSOUNAS,S.KNAPP JRNL TITL A UNIQUE INHIBITOR BINDING SITE IN ERK1/2 IS ASSOCIATED WITH JRNL TITL 2 SLOW BINDING KINETICS. JRNL REF NAT.CHEM.BIOL. V. 10 853 2014 JRNL REFN ISSN 1552-4450 JRNL PMID 25195011 JRNL DOI 10.1038/NCHEMBIO.1629 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 93986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4936 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6868 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 347 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2637 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : -0.19000 REMARK 3 B33 (A**2) : 0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.043 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.044 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.031 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.567 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2883 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2768 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3922 ; 1.610 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6414 ; 0.772 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 367 ; 6.559 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;34.798 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 528 ;12.316 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;21.870 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 432 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3416 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 668 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1357 ; 1.473 ; 1.536 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1356 ; 1.460 ; 1.534 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1705 ; 2.316 ; 2.306 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1705 ; 2.319 ; 2.305 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1526 ; 2.439 ; 1.898 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1526 ; 2.439 ; 1.898 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2199 ; 3.777 ; 2.733 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3776 ; 7.719 ;15.860 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3774 ; 7.723 ;15.820 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 469 A 488 REMARK 3 ORIGIN FOR THE GROUP (A): 59.4127 13.4930 4.7542 REMARK 3 T TENSOR REMARK 3 T11: 0.0806 T22: 0.1244 REMARK 3 T33: 0.1419 T12: -0.0505 REMARK 3 T13: -0.0577 T23: 0.0327 REMARK 3 L TENSOR REMARK 3 L11: 0.5133 L22: 2.3495 REMARK 3 L33: 6.2764 L12: 0.6953 REMARK 3 L13: -0.9792 L23: -1.2695 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: -0.1224 S13: -0.1328 REMARK 3 S21: -0.2651 S22: 0.1129 S23: -0.1291 REMARK 3 S31: 0.4500 S32: -0.0990 S33: -0.0861 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 489 A 609 REMARK 3 ORIGIN FOR THE GROUP (A): 64.0652 24.6862 4.5029 REMARK 3 T TENSOR REMARK 3 T11: 0.0271 T22: 0.0325 REMARK 3 T33: 0.0784 T12: 0.0073 REMARK 3 T13: -0.0195 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.9419 L22: 0.1680 REMARK 3 L33: 0.5806 L12: 0.2192 REMARK 3 L13: 0.5573 L23: 0.1022 REMARK 3 S TENSOR REMARK 3 S11: -0.0897 S12: 0.0370 S13: 0.0188 REMARK 3 S21: -0.0076 S22: 0.0688 S23: 0.0127 REMARK 3 S31: -0.0234 S32: 0.0148 S33: 0.0209 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 610 A 798 REMARK 3 ORIGIN FOR THE GROUP (A): 78.0165 39.7136 17.2474 REMARK 3 T TENSOR REMARK 3 T11: 0.0509 T22: 0.0265 REMARK 3 T33: 0.0589 T12: 0.0013 REMARK 3 T13: 0.0047 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.5684 L22: 0.7841 REMARK 3 L33: 0.5412 L12: 0.2047 REMARK 3 L13: -0.2321 L23: 0.3575 REMARK 3 S TENSOR REMARK 3 S11: 0.0694 S12: 0.0146 S13: 0.0567 REMARK 3 S21: 0.0369 S22: -0.0477 S23: 0.0326 REMARK 3 S31: -0.0823 S32: -0.0001 S33: -0.0217 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QTC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086487. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : SI (111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : KIRKPATRICK BAEZ BIMORPH MIRROR REMARK 200 PAIR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98923 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 36.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.69300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3DLZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 51% MPD AND 0.1 M SPG PH 6.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.94500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.87500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.18000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.87500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.94500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.18000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 442 REMARK 465 HIS A 443 REMARK 465 HIS A 444 REMARK 465 HIS A 445 REMARK 465 HIS A 446 REMARK 465 HIS A 447 REMARK 465 HIS A 448 REMARK 465 SER A 449 REMARK 465 SER A 450 REMARK 465 GLY A 451 REMARK 465 VAL A 452 REMARK 465 ASP A 453 REMARK 465 LEU A 454 REMARK 465 GLY A 455 REMARK 465 THR A 456 REMARK 465 GLU A 457 REMARK 465 ASN A 458 REMARK 465 LEU A 459 REMARK 465 TYR A 460 REMARK 465 PHE A 461 REMARK 465 GLN A 462 REMARK 465 SER A 463 REMARK 465 MET A 464 REMARK 465 GLY A 465 REMARK 465 GLU A 466 REMARK 465 CYS A 467 REMARK 465 SER A 468 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 469 CG CD OE1 NE2 REMARK 470 LYS A 470 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 682 O HOH A 1042 2.13 REMARK 500 O HOH A 1140 O HOH A 1360 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 552 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 GLU A 604 OE1 - CD - OE2 ANGL. DEV. = 8.1 DEGREES REMARK 500 ASP A 696 CB - CG - OD1 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 470 32.77 -94.05 REMARK 500 GLU A 516 -5.86 77.90 REMARK 500 ASP A 649 51.62 -154.63 REMARK 500 LEU A 650 58.98 -92.94 REMARK 500 ASP A 687 94.29 72.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 38Z A 804 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QTA RELATED DB: PDB REMARK 900 RELATED ID: 4QTB RELATED DB: PDB REMARK 900 RELATED ID: 4QTD RELATED DB: PDB REMARK 900 RELATED ID: 4QTE RELATED DB: PDB DBREF 4QTC A 465 798 UNP Q8TF76 HASP_HUMAN 465 798 SEQADV 4QTC MET A 442 UNP Q8TF76 INITIATING METHIONINE SEQADV 4QTC HIS A 443 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC HIS A 444 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC HIS A 445 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC HIS A 446 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC HIS A 447 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC HIS A 448 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC SER A 449 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC SER A 450 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC GLY A 451 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC VAL A 452 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC ASP A 453 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC LEU A 454 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC GLY A 455 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC THR A 456 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC GLU A 457 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC ASN A 458 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC LEU A 459 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC TYR A 460 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC PHE A 461 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC GLN A 462 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC SER A 463 UNP Q8TF76 EXPRESSION TAG SEQADV 4QTC MET A 464 UNP Q8TF76 EXPRESSION TAG SEQRES 1 A 357 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 357 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLY GLU CYS SEQRES 3 A 357 SER GLN LYS GLY PRO VAL PRO PHE SER HIS CYS LEU PRO SEQRES 4 A 357 THR GLU LYS LEU GLN ARG CYS GLU LYS ILE GLY GLU GLY SEQRES 5 A 357 VAL PHE GLY GLU VAL PHE GLN THR ILE ALA ASP HIS THR SEQRES 6 A 357 PRO VAL ALA ILE LYS ILE ILE ALA ILE GLU GLY PRO ASP SEQRES 7 A 357 LEU VAL ASN GLY SER HIS GLN LYS THR PHE GLU GLU ILE SEQRES 8 A 357 LEU PRO GLU ILE ILE ILE SER LYS GLU LEU SER LEU LEU SEQRES 9 A 357 SER GLY GLU VAL CYS ASN ARG THR GLU GLY PHE ILE GLY SEQRES 10 A 357 LEU ASN SER VAL HIS CYS VAL GLN GLY SER TYR PRO PRO SEQRES 11 A 357 LEU LEU LEU LYS ALA TRP ASP HIS TYR ASN SER THR LYS SEQRES 12 A 357 GLY SER ALA ASN ASP ARG PRO ASP PHE PHE LYS ASP ASP SEQRES 13 A 357 GLN LEU PHE ILE VAL LEU GLU PHE GLU PHE GLY GLY ILE SEQRES 14 A 357 ASP LEU GLU GLN MET ARG THR LYS LEU SER SER LEU ALA SEQRES 15 A 357 THR ALA LYS SER ILE LEU HIS GLN LEU THR ALA SER LEU SEQRES 16 A 357 ALA VAL ALA GLU ALA SER LEU ARG PHE GLU HIS ARG ASP SEQRES 17 A 357 LEU HIS TRP GLY ASN VAL LEU LEU LYS LYS THR SER LEU SEQRES 18 A 357 LYS LYS LEU HIS TYR THR LEU ASN GLY LYS SER SER THR SEQRES 19 A 357 ILE PRO SER CYS GLY LEU GLN VAL SER ILE ILE ASP TYR SEQRES 20 A 357 THR LEU SER ARG LEU GLU ARG ASP GLY ILE VAL VAL PHE SEQRES 21 A 357 CYS ASP VAL SER MET ASP GLU ASP LEU PHE THR GLY ASP SEQRES 22 A 357 GLY ASP TYR GLN PHE ASP ILE TYR ARG LEU MET LYS LYS SEQRES 23 A 357 GLU ASN ASN ASN ARG TRP GLY GLU TYR HIS PRO TYR SER SEQRES 24 A 357 ASN VAL LEU TRP LEU HIS TYR LEU THR ASP LYS MET LEU SEQRES 25 A 357 LYS GLN MET THR PHE LYS THR LYS CYS ASN THR PRO ALA SEQRES 26 A 357 MET LYS GLN ILE LYS ARG LYS ILE GLN GLU PHE HIS ARG SEQRES 27 A 357 THR MET LEU ASN PHE SER SER ALA THR ASP LEU LEU CYS SEQRES 28 A 357 GLN HIS SER LEU PHE LYS HET MPD A 801 8 HET GOL A 802 6 HET GOL A 803 6 HET 38Z A 804 44 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM GOL GLYCEROL HETNAM 38Z (3R)-1-(2-OXO-2-{4-[4-(PYRIMIDIN-2-YL)PHENYL]PIPERAZIN- HETNAM 2 38Z 1-YL}ETHYL)-N-[3-(PYRIDIN-4-YL)-2H-INDAZOL-5- HETNAM 3 38Z YL]PYRROLIDINE-3-CARBOXAMIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MPD C6 H14 O2 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 38Z C33 H33 N9 O2 FORMUL 6 HOH *500(H2 O) HELIX 1 1 PRO A 474 LEU A 479 1 6 HELIX 2 2 PRO A 480 ARG A 486 1 7 HELIX 3 3 THR A 528 LEU A 545 1 18 HELIX 4 4 SER A 546 GLU A 548 5 3 HELIX 5 5 PRO A 570 LYS A 584 1 15 HELIX 6 6 SER A 621 ARG A 644 1 24 HELIX 7 7 HIS A 651 GLY A 653 5 3 HELIX 8 8 GLU A 708 THR A 712 5 5 HELIX 9 9 ASP A 716 ASN A 730 1 15 HELIX 10 10 PRO A 738 GLN A 755 1 18 HELIX 11 11 THR A 764 MET A 781 1 18 HELIX 12 12 LEU A 782 PHE A 784 5 3 HELIX 13 13 SER A 786 HIS A 794 1 9 HELIX 14 14 SER A 795 LYS A 798 5 4 SHEET 1 A 5 GLU A 488 GLY A 493 0 SHEET 2 A 5 GLY A 496 ALA A 503 -1 O GLN A 500 N GLU A 488 SHEET 3 A 5 THR A 506 ILE A 515 -1 O ILE A 510 N PHE A 499 SHEET 4 A 5 LEU A 599 GLU A 606 -1 O PHE A 605 N ALA A 509 SHEET 5 A 5 LEU A 559 GLN A 566 -1 N SER A 561 O GLU A 604 SHEET 1 B 2 LEU A 520 VAL A 521 0 SHEET 2 B 2 SER A 524 HIS A 525 -1 O SER A 524 N VAL A 521 SHEET 1 C 3 ILE A 610 ASP A 611 0 SHEET 2 C 3 VAL A 655 LYS A 659 -1 O LEU A 657 N ILE A 610 SHEET 3 C 3 LEU A 681 ILE A 685 -1 O SER A 684 N LEU A 656 SHEET 1 D 2 LYS A 664 LEU A 669 0 SHEET 2 D 2 LYS A 672 PRO A 677 -1 O LYS A 672 N LEU A 669 SHEET 1 E 2 LEU A 693 ARG A 695 0 SHEET 2 E 2 ILE A 698 VAL A 700 -1 O VAL A 700 N LEU A 693 SITE 1 AC1 7 ILE A 537 PRO A 571 ARG A 695 ILE A 698 SITE 2 AC1 7 HOH A 955 HOH A1259 HOH A1261 SITE 1 AC2 6 TYR A 667 LYS A 672 SER A 673 SER A 674 SITE 2 AC2 6 HOH A1270 HOH A1356 SITE 1 AC3 4 TYR A 739 LEU A 782 ASN A 783 PHE A 784 SITE 1 AC4 19 ILE A 490 GLY A 491 GLU A 492 VAL A 498 SITE 2 AC4 19 ALA A 509 TYR A 580 LYS A 584 GLY A 585 SITE 3 AC4 19 SER A 586 ALA A 587 GLU A 606 GLY A 608 SITE 4 AC4 19 GLY A 609 GLN A 614 LEU A 656 HOH A 904 SITE 5 AC4 19 HOH A 920 HOH A1185 HOH A1202 CRYST1 77.890 78.360 81.750 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012839 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012232 0.00000