HEADER OXIDOREDUCTASE 10-JUL-14 4QU1 TITLE CRYSTAL STRUCTURE OF HUMAN JMJD5 JMJ-C DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: JMJ-C DOMAIN (UNP RESIDUES 183-416); COMPND 5 SYNONYM: JMJC DOMAIN-CONTAINING PROTEIN 5, JUMONJI DOMAIN-CONTAINING COMPND 6 PROTEIN 5, JMJD5; COMPND 7 EC: 1.14.11.27; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KDM8, JMJD5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS JMJ-C DOMAIN, DEMETHYLATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR H.L.LIU,C.WANG,G.Y.ZHANG REVDAT 2 28-FEB-24 4QU1 1 REMARK SEQADV LINK REVDAT 1 15-JUL-15 4QU1 0 JRNL AUTH H.L.LIU,C.WANG,C.DEGE,F.K.NING,J.WEISZ,K.HANSEN,J.Y.ZANG, JRNL AUTH 2 C.H.PAN,P.MARRACK,J.KAPPLER,J.HAGMEN,G.Y.ZHANG JRNL TITL THE HISTONE ARGININE DEMETHYLASE JMJD5 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 35767 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1787 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.8517 - 3.6902 1.00 2792 147 0.1404 0.1710 REMARK 3 2 3.6902 - 2.9293 1.00 2682 141 0.1466 0.1696 REMARK 3 3 2.9293 - 2.5591 1.00 2640 138 0.1435 0.1424 REMARK 3 4 2.5591 - 2.3251 1.00 2627 138 0.1432 0.1517 REMARK 3 5 2.3251 - 2.1585 1.00 2596 137 0.1443 0.1599 REMARK 3 6 2.1585 - 2.0312 1.00 2625 139 0.1409 0.1817 REMARK 3 7 2.0312 - 1.9295 1.00 2619 137 0.1425 0.1635 REMARK 3 8 1.9295 - 1.8455 1.00 2563 135 0.1488 0.1771 REMARK 3 9 1.8455 - 1.7744 1.00 2593 137 0.1579 0.1933 REMARK 3 10 1.7744 - 1.7132 1.00 2575 135 0.1707 0.2384 REMARK 3 11 1.7132 - 1.6596 1.00 2590 136 0.1823 0.2046 REMARK 3 12 1.6596 - 1.6122 1.00 2587 136 0.2031 0.2560 REMARK 3 13 1.6122 - 1.5700 0.97 2491 131 0.2224 0.2781 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2023 REMARK 3 ANGLE : 1.042 2760 REMARK 3 CHIRALITY : 0.067 288 REMARK 3 PLANARITY : 0.005 361 REMARK 3 DIHEDRAL : 15.174 752 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QU1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(220) SIDE BOUNCE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35833 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.0, 8% PEG3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.81350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.89100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.89100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.81350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 196 CZ REMARK 480 GLN A 198 OE1 REMARK 480 GLN A 287 CD OE1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS A 355 HD1 HIS A 358 1.59 REMARK 500 O HOH A 850 O HOH A 861 1.92 REMARK 500 O HOH A 871 O HOH A 877 1.97 REMARK 500 O HOH A 855 O HOH A 878 2.02 REMARK 500 O HOH A 740 O HOH A 781 2.13 REMARK 500 NE2 GLN A 219 O HOH A 868 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 189 58.51 37.68 REMARK 500 PHE A 199 -52.36 -133.01 REMARK 500 ILE A 263 -58.56 -121.64 REMARK 500 GLU A 266 84.85 13.29 REMARK 500 ASN A 367 63.25 -153.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 321 NE2 REMARK 620 2 ASP A 323 OD2 105.1 REMARK 620 3 HIS A 400 NE2 86.7 84.6 REMARK 620 4 AKG A 502 O2 164.3 87.4 104.2 REMARK 620 5 AKG A 502 O5 90.3 164.3 93.1 78.0 REMARK 620 6 HOH A 623 O 84.3 87.9 166.3 86.8 97.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UYJ RELATED DB: PDB REMARK 900 RELATED ID: 4AAP RELATED DB: PDB REMARK 900 RELATED ID: 4GAZ RELATED DB: PDB REMARK 900 RELATED ID: 4GJY RELATED DB: PDB REMARK 900 RELATED ID: 4GJZ RELATED DB: PDB REMARK 900 RELATED ID: 4QSZ RELATED DB: PDB REMARK 900 RELATED ID: 4QU2 RELATED DB: PDB DBREF 4QU1 A 183 416 UNP Q8N371 KDM8_HUMAN 183 416 SEQADV 4QU1 GLY A 181 UNP Q8N371 EXPRESSION TAG SEQADV 4QU1 SER A 182 UNP Q8N371 EXPRESSION TAG SEQRES 1 A 236 GLY SER THR VAL PRO ARG LEU HIS ARG PRO SER LEU GLN SEQRES 2 A 236 HIS PHE ARG GLU GLN PHE LEU VAL PRO GLY ARG PRO VAL SEQRES 3 A 236 ILE LEU LYS GLY VAL ALA ASP HIS TRP PRO CYS MET GLN SEQRES 4 A 236 LYS TRP SER LEU GLU TYR ILE GLN GLU ILE ALA GLY CYS SEQRES 5 A 236 ARG THR VAL PRO VAL GLU VAL GLY SER ARG TYR THR ASP SEQRES 6 A 236 GLU GLU TRP SER GLN THR LEU MET THR VAL ASN GLU PHE SEQRES 7 A 236 ILE SER LYS TYR ILE VAL ASN GLU PRO ARG ASP VAL GLY SEQRES 8 A 236 TYR LEU ALA GLN HIS GLN LEU PHE ASP GLN ILE PRO GLU SEQRES 9 A 236 LEU LYS GLN ASP ILE SER ILE PRO ASP TYR CYS SER LEU SEQRES 10 A 236 GLY ASP GLY GLU GLU GLU GLU ILE THR ILE ASN ALA TRP SEQRES 11 A 236 PHE GLY PRO GLN GLY THR ILE SER PRO LEU HIS GLN ASP SEQRES 12 A 236 PRO GLN GLN ASN PHE LEU VAL GLN VAL MET GLY ARG LYS SEQRES 13 A 236 TYR ILE ARG LEU TYR SER PRO GLN GLU SER GLY ALA LEU SEQRES 14 A 236 TYR PRO HIS ASP THR HIS LEU LEU HIS ASN THR SER GLN SEQRES 15 A 236 VAL ASP VAL GLU ASN PRO ASP LEU GLU LYS PHE PRO LYS SEQRES 16 A 236 PHE ALA LYS ALA PRO PHE LEU SER CYS ILE LEU SER PRO SEQRES 17 A 236 GLY GLU ILE LEU PHE ILE PRO VAL LYS TYR TRP HIS TYR SEQRES 18 A 236 VAL ARG ALA LEU ASP LEU SER PHE SER VAL SER PHE TRP SEQRES 19 A 236 TRP SER HET NI A 501 1 HET AKG A 502 14 HET GOL A 503 14 HETNAM NI NICKEL (II) ION HETNAM AKG 2-OXOGLUTARIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NI NI 2+ FORMUL 3 AKG C5 H6 O5 FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *279(H2 O) HELIX 1 1 SER A 191 PHE A 199 1 9 HELIX 2 2 TRP A 215 TRP A 221 1 7 HELIX 3 3 SER A 222 GLY A 231 1 10 HELIX 4 4 VAL A 255 ILE A 263 1 9 HELIX 5 5 GLN A 277 ILE A 282 1 6 HELIX 6 6 ILE A 282 GLN A 287 1 6 HELIX 7 7 PRO A 292 GLY A 298 5 7 HELIX 8 8 GLU A 301 ILE A 305 5 5 HELIX 9 9 SER A 342 TYR A 350 5 9 HELIX 10 10 PHE A 373 ALA A 377 5 5 SHEET 1 A 5 SER A 182 THR A 183 0 SHEET 2 A 5 LEU A 382 LEU A 386 1 O SER A 383 N SER A 182 SHEET 3 A 5 LYS A 336 TYR A 341 -1 N LYS A 336 O LEU A 386 SHEET 4 A 5 TRP A 399 ALA A 404 -1 O ARG A 403 N TYR A 337 SHEET 5 A 5 ILE A 317 HIS A 321 -1 N HIS A 321 O HIS A 400 SHEET 1 B 9 ARG A 186 HIS A 188 0 SHEET 2 B 9 VAL A 206 LYS A 209 1 O LYS A 209 N LEU A 187 SHEET 3 B 9 ILE A 391 ILE A 394 -1 O PHE A 393 N VAL A 206 SHEET 4 B 9 GLN A 326 MET A 333 -1 N LEU A 329 O LEU A 392 SHEET 5 B 9 SER A 408 TRP A 415 -1 O VAL A 411 N VAL A 330 SHEET 6 B 9 THR A 306 GLY A 312 -1 N THR A 306 O TRP A 414 SHEET 7 B 9 GLY A 271 HIS A 276 -1 N HIS A 276 O ALA A 309 SHEET 8 B 9 THR A 234 VAL A 239 -1 N GLU A 238 O TYR A 272 SHEET 9 B 9 SER A 249 THR A 254 -1 O MET A 253 N VAL A 235 LINK NE2 HIS A 321 NI NI A 501 1555 1555 2.18 LINK OD2 ASP A 323 NI NI A 501 1555 1555 2.15 LINK NE2 HIS A 400 NI NI A 501 1555 1555 2.20 LINK NI NI A 501 O2 AKG A 502 1555 1555 2.13 LINK NI NI A 501 O5 AKG A 502 1555 1555 2.16 LINK NI NI A 501 O HOH A 623 1555 1555 2.17 SITE 1 AC1 5 HIS A 321 ASP A 323 HIS A 400 AKG A 502 SITE 2 AC1 5 HOH A 623 SITE 1 AC2 14 TYR A 272 TRP A 310 SER A 318 HIS A 321 SITE 2 AC2 14 ASP A 323 ASN A 327 LYS A 336 HIS A 400 SITE 3 AC2 14 VAL A 402 SER A 412 TRP A 414 NI A 501 SITE 4 AC2 14 HOH A 606 HOH A 623 SITE 1 AC3 6 PRO A 190 GLU A 266 ASP A 293 TYR A 294 SITE 2 AC3 6 HOH A 686 HOH A 705 CRYST1 49.627 65.030 77.782 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020150 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015378 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012856 0.00000