HEADER TRANSCRIPTION 10-JUL-14 4QU2 TITLE THE STRUCTURE OF JMJD7 WITH ALPHA-KG COMPND MOL_ID: 1; COMPND 2 MOLECULE: JMJC DOMAIN-CONTAINING PROTEIN 7; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: JUMONJI DOMAIN-CONTAINING PROTEIN 7, JMJD7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: JMJD7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS JMJ-C DOMAIN, DEMETHYLATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR H.L.LIU,C.WANG,G.Y.ZHANG REVDAT 3 28-FEB-24 4QU2 1 REMARK SEQADV LINK REVDAT 2 22-NOV-17 4QU2 1 REMARK REVDAT 1 15-JUL-15 4QU2 0 JRNL AUTH H.L.LIU,C.WANG,C.DEGE,F.K.NING,J.WEISZ,K.HANSEN,Z.Z.CHEN, JRNL AUTH 2 C.H.PAN,C.W.NHO,J.NIX,P.MARRACK,J.KAPPLER,J.HAGMEN,G.Y.ZHANG JRNL TITL THE STRUCTURE OF JMJD7 WITH ALPHA-KG JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 17487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.330 REMARK 3 FREE R VALUE TEST SET COUNT : 1631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.7166 - 6.1785 0.99 1494 155 0.2136 0.2472 REMARK 3 2 6.1785 - 4.9053 0.99 1396 144 0.2039 0.2240 REMARK 3 3 4.9053 - 4.2856 0.99 1397 143 0.1583 0.2128 REMARK 3 4 4.2856 - 3.8939 0.99 1355 142 0.1670 0.1824 REMARK 3 5 3.8939 - 3.6149 0.99 1355 139 0.1782 0.2430 REMARK 3 6 3.6149 - 3.4018 0.97 1327 140 0.2132 0.2509 REMARK 3 7 3.4018 - 3.2314 0.96 1314 137 0.2261 0.3078 REMARK 3 8 3.2314 - 3.0908 0.95 1281 133 0.2394 0.2805 REMARK 3 9 3.0908 - 2.9718 0.93 1236 128 0.2374 0.3202 REMARK 3 10 2.9718 - 2.8693 0.92 1272 129 0.2617 0.3070 REMARK 3 11 2.8693 - 2.7796 0.91 1233 125 0.2551 0.3442 REMARK 3 12 2.7796 - 2.7000 0.89 1196 116 0.2819 0.3747 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 7.99 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 20.32410 REMARK 3 B22 (A**2) : -6.96330 REMARK 3 B33 (A**2) : -13.36080 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5274 REMARK 3 ANGLE : 0.812 7223 REMARK 3 CHIRALITY : 0.056 776 REMARK 3 PLANARITY : 0.003 945 REMARK 3 DIHEDRAL : 15.504 1923 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QU2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086513. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK SI(111) SAGITALLY REMARK 200 FOCUSED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21313 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES MONOHYDRATE, PH 6.0, 10% REMARK 280 PEG4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.76750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.79150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.75800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 99.79150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.76750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.75800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU B 185 O HOH B 652 1.87 REMARK 500 O GLU B 80 O HOH B 604 1.92 REMARK 500 OD2 ASP A 316 O HOH A 614 1.95 REMARK 500 O HOH A 610 O HOH A 613 2.08 REMARK 500 O LEU A 157 O HOH A 631 2.09 REMARK 500 O THR B 262 O HOH B 603 2.14 REMARK 500 OE1 GLU A 147 O HOH A 623 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 131 N - CA - C ANGL. DEV. = -21.9 DEGREES REMARK 500 LYS B 130 CB - CA - C ANGL. DEV. = 37.5 DEGREES REMARK 500 LYS B 130 N - CA - C ANGL. DEV. = -34.1 DEGREES REMARK 500 ALA B 231 CB - CA - C ANGL. DEV. = 19.4 DEGREES REMARK 500 GLU B 233 CB - CA - C ANGL. DEV. = -23.3 DEGREES REMARK 500 GLU B 233 N - CA - C ANGL. DEV. = 17.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 45 -54.26 -130.31 REMARK 500 TRP A 67 84.95 -69.34 REMARK 500 TYR A 127 112.35 -161.69 REMARK 500 GLN A 129 17.34 -146.97 REMARK 500 HIS A 181 42.03 -91.82 REMARK 500 GLU A 230 30.22 -87.01 REMARK 500 MET A 232 138.20 -172.08 REMARK 500 ASP A 297 -165.00 -118.69 REMARK 500 TRP B 45 -50.63 -133.71 REMARK 500 LYS B 66 -43.82 -134.10 REMARK 500 TRP B 67 96.63 -63.94 REMARK 500 GLN B 131 39.30 -145.00 REMARK 500 ILE B 146 -164.72 -128.08 REMARK 500 HIS B 181 41.85 -94.11 REMARK 500 GLU B 230 -166.27 71.81 REMARK 500 ALA B 231 -72.22 -122.77 REMARK 500 GLU B 233 117.62 -34.48 REMARK 500 ASP B 297 -158.33 -121.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 130 GLN B 131 145.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 178 NE2 REMARK 620 2 HIS A 277 NE2 85.2 REMARK 620 3 AKG A 502 O5 106.9 73.9 REMARK 620 4 AKG A 502 O2 157.3 115.4 72.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 501 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 178 NE2 REMARK 620 2 ASP B 180 OD2 113.3 REMARK 620 3 HIS B 277 NE2 71.0 83.9 REMARK 620 4 AKG B 502 O5 88.9 141.6 73.9 REMARK 620 5 AKG B 502 O2 149.5 79.7 83.9 67.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QSZ RELATED DB: PDB REMARK 900 RELATED ID: 4QU1 RELATED DB: PDB DBREF 4QU2 A 1 316 UNP P0C872 JMJD7_MOUSE 1 316 DBREF 4QU2 B 1 316 UNP P0C872 JMJD7_MOUSE 1 316 SEQADV 4QU2 GLY A -1 UNP P0C872 EXPRESSION TAG SEQADV 4QU2 SER A 0 UNP P0C872 EXPRESSION TAG SEQADV 4QU2 GLY B -1 UNP P0C872 EXPRESSION TAG SEQADV 4QU2 SER B 0 UNP P0C872 EXPRESSION TAG SEQRES 1 A 318 GLY SER MET ALA GLU ALA ALA LEU GLU ALA VAL ARG ARG SEQRES 2 A 318 ALA LEU GLN GLU PHE PRO ALA ALA ALA ARG ASP LEU ASN SEQRES 3 A 318 VAL PRO ARG VAL VAL PRO TYR LEU ASP GLU PRO PRO SER SEQRES 4 A 318 PRO LEU CYS PHE TYR ARG ASP TRP VAL CYS PRO ASN ARG SEQRES 5 A 318 PRO CYS ILE ILE ARG ASN ALA LEU GLN HIS TRP PRO ALA SEQRES 6 A 318 LEU GLN LYS TRP SER LEU SER TYR LEU ARG ALA THR VAL SEQRES 7 A 318 GLY SER THR GLU VAL SER VAL ALA VAL THR PRO ASP GLY SEQRES 8 A 318 TYR ALA ASP ALA VAL ARG GLY ASP ARG PHE VAL MET PRO SEQRES 9 A 318 ALA GLU ARG ARG LEU PRO ILE SER HIS VAL LEU ASP VAL SEQRES 10 A 318 LEU GLU GLY ARG ALA GLN HIS PRO GLY VAL LEU TYR VAL SEQRES 11 A 318 GLN LYS GLN CYS SER ASN LEU PRO THR GLU LEU PRO GLN SEQRES 12 A 318 LEU LEU SER ASP ILE GLU SER HIS VAL PRO TRP ALA SER SEQRES 13 A 318 GLU SER LEU GLY LYS MET PRO ASP ALA VAL ASN PHE TRP SEQRES 14 A 318 LEU GLY ASP ALA SER ALA VAL THR SER LEU HIS LYS ASP SEQRES 15 A 318 HIS TYR GLU ASN LEU TYR CYS VAL VAL SER GLY GLU LYS SEQRES 16 A 318 HIS PHE LEU LEU HIS PRO PRO SER ASP ARG PRO PHE ILE SEQRES 17 A 318 PRO TYR ASN LEU TYR THR PRO ALA THR TYR GLN LEU THR SEQRES 18 A 318 GLU GLU GLY THR PHE ARG VAL VAL ASP GLU GLU ALA MET SEQRES 19 A 318 GLU LYS VAL PRO TRP ILE PRO LEU ASP PRO LEU ALA PRO SEQRES 20 A 318 ASP LEU THR GLN TYR PRO SER TYR SER GLN ALA GLN ALA SEQRES 21 A 318 LEU HIS CYS THR VAL ARG ALA GLY GLU MET LEU TYR LEU SEQRES 22 A 318 PRO ALA LEU TRP PHE HIS HIS VAL GLN GLN SER HIS GLY SEQRES 23 A 318 CYS ILE ALA VAL ASN PHE TRP TYR ASP MET GLU TYR ASP SEQRES 24 A 318 LEU LYS TYR SER TYR PHE GLN LEU MET ASP THR LEU THR SEQRES 25 A 318 ARG ALA THR GLY LEU ASP SEQRES 1 B 318 GLY SER MET ALA GLU ALA ALA LEU GLU ALA VAL ARG ARG SEQRES 2 B 318 ALA LEU GLN GLU PHE PRO ALA ALA ALA ARG ASP LEU ASN SEQRES 3 B 318 VAL PRO ARG VAL VAL PRO TYR LEU ASP GLU PRO PRO SER SEQRES 4 B 318 PRO LEU CYS PHE TYR ARG ASP TRP VAL CYS PRO ASN ARG SEQRES 5 B 318 PRO CYS ILE ILE ARG ASN ALA LEU GLN HIS TRP PRO ALA SEQRES 6 B 318 LEU GLN LYS TRP SER LEU SER TYR LEU ARG ALA THR VAL SEQRES 7 B 318 GLY SER THR GLU VAL SER VAL ALA VAL THR PRO ASP GLY SEQRES 8 B 318 TYR ALA ASP ALA VAL ARG GLY ASP ARG PHE VAL MET PRO SEQRES 9 B 318 ALA GLU ARG ARG LEU PRO ILE SER HIS VAL LEU ASP VAL SEQRES 10 B 318 LEU GLU GLY ARG ALA GLN HIS PRO GLY VAL LEU TYR VAL SEQRES 11 B 318 GLN LYS GLN CYS SER ASN LEU PRO THR GLU LEU PRO GLN SEQRES 12 B 318 LEU LEU SER ASP ILE GLU SER HIS VAL PRO TRP ALA SER SEQRES 13 B 318 GLU SER LEU GLY LYS MET PRO ASP ALA VAL ASN PHE TRP SEQRES 14 B 318 LEU GLY ASP ALA SER ALA VAL THR SER LEU HIS LYS ASP SEQRES 15 B 318 HIS TYR GLU ASN LEU TYR CYS VAL VAL SER GLY GLU LYS SEQRES 16 B 318 HIS PHE LEU LEU HIS PRO PRO SER ASP ARG PRO PHE ILE SEQRES 17 B 318 PRO TYR ASN LEU TYR THR PRO ALA THR TYR GLN LEU THR SEQRES 18 B 318 GLU GLU GLY THR PHE ARG VAL VAL ASP GLU GLU ALA MET SEQRES 19 B 318 GLU LYS VAL PRO TRP ILE PRO LEU ASP PRO LEU ALA PRO SEQRES 20 B 318 ASP LEU THR GLN TYR PRO SER TYR SER GLN ALA GLN ALA SEQRES 21 B 318 LEU HIS CYS THR VAL ARG ALA GLY GLU MET LEU TYR LEU SEQRES 22 B 318 PRO ALA LEU TRP PHE HIS HIS VAL GLN GLN SER HIS GLY SEQRES 23 B 318 CYS ILE ALA VAL ASN PHE TRP TYR ASP MET GLU TYR ASP SEQRES 24 B 318 LEU LYS TYR SER TYR PHE GLN LEU MET ASP THR LEU THR SEQRES 25 B 318 ARG ALA THR GLY LEU ASP HET NI A 501 1 HET AKG A 502 10 HET NI B 501 1 HET AKG B 502 10 HETNAM NI NICKEL (II) ION HETNAM AKG 2-OXOGLUTARIC ACID FORMUL 3 NI 2(NI 2+) FORMUL 4 AKG 2(C5 H6 O5) FORMUL 7 HOH *89(H2 O) HELIX 1 1 GLY A -1 ASN A 24 1 26 HELIX 2 2 SER A 37 TRP A 45 1 9 HELIX 3 3 PRO A 62 TRP A 67 1 6 HELIX 4 4 SER A 68 GLY A 77 1 10 HELIX 5 5 ILE A 109 GLY A 118 1 10 HELIX 6 6 SER A 133 LEU A 139 1 7 HELIX 7 7 PRO A 140 ILE A 146 5 7 HELIX 8 8 VAL A 150 GLY A 158 1 9 HELIX 9 9 PRO A 199 ILE A 206 5 8 HELIX 10 10 TYR A 250 ALA A 256 5 7 HELIX 11 11 ASP A 297 THR A 313 1 17 HELIX 12 12 MET B 1 VAL B 25 1 25 HELIX 13 13 SER B 37 TRP B 45 1 9 HELIX 14 14 TRP B 61 LYS B 66 5 6 HELIX 15 15 SER B 68 GLY B 77 1 10 HELIX 16 16 ILE B 109 GLY B 118 1 10 HELIX 17 17 SER B 133 LEU B 139 1 7 HELIX 18 18 PRO B 140 ILE B 146 5 7 HELIX 19 19 VAL B 150 GLY B 158 1 9 HELIX 20 20 PRO B 199 ILE B 206 5 8 HELIX 21 21 TYR B 250 ALA B 256 5 7 HELIX 22 22 ASP B 297 THR B 313 1 17 SHEET 1 A 9 TYR A 31 LEU A 32 0 SHEET 2 A 9 CYS A 52 ARG A 55 1 O ARG A 55 N LEU A 32 SHEET 3 A 9 GLU A 267 LEU A 271 -1 O MET A 268 N ILE A 54 SHEET 4 A 9 TYR A 182 SER A 190 -1 N ASN A 184 O LEU A 271 SHEET 5 A 9 CYS A 285 ASP A 293 -1 O VAL A 288 N CYS A 187 SHEET 6 A 9 ALA A 163 GLY A 169 -1 N ALA A 163 O TRP A 291 SHEET 7 A 9 VAL A 125 VAL A 128 -1 N VAL A 128 O LEU A 168 SHEET 8 A 9 GLU A 80 THR A 86 -1 N THR A 86 O VAL A 125 SHEET 9 A 9 ALA A 103 PRO A 108 -1 O LEU A 107 N VAL A 81 SHEET 1 B 4 ALA A 93 ARG A 95 0 SHEET 2 B 4 ARG A 98 MET A 101 -1 O VAL A 100 N ALA A 93 SHEET 3 B 4 ASN A 209 LEU A 218 1 O ALA A 214 N MET A 101 SHEET 4 B 4 PHE A 224 ASP A 228 -1 O VAL A 227 N THR A 215 SHEET 1 C 4 ALA A 93 ARG A 95 0 SHEET 2 C 4 ARG A 98 MET A 101 -1 O VAL A 100 N ALA A 93 SHEET 3 C 4 ASN A 209 LEU A 218 1 O ALA A 214 N MET A 101 SHEET 4 C 4 VAL A 235 TRP A 237 -1 O VAL A 235 N TYR A 211 SHEET 1 D 4 THR A 175 HIS A 178 0 SHEET 2 D 4 PHE A 276 GLN A 281 -1 O VAL A 279 N THR A 175 SHEET 3 D 4 LYS A 193 HIS A 198 -1 N HIS A 194 O GLN A 280 SHEET 4 D 4 LEU A 259 VAL A 263 -1 O LEU A 259 N LEU A 197 SHEET 1 E 9 TYR B 31 LEU B 32 0 SHEET 2 E 9 CYS B 52 ILE B 54 1 O ILE B 53 N LEU B 32 SHEET 3 E 9 MET B 268 LEU B 271 -1 O MET B 268 N ILE B 54 SHEET 4 E 9 TYR B 182 SER B 190 -1 N TYR B 186 O LEU B 269 SHEET 5 E 9 CYS B 285 ASP B 293 -1 O TYR B 292 N GLU B 183 SHEET 6 E 9 ALA B 163 GLY B 169 -1 N ASN B 165 O ASN B 289 SHEET 7 E 9 VAL B 125 VAL B 128 -1 N VAL B 128 O LEU B 168 SHEET 8 E 9 GLU B 80 THR B 86 -1 N THR B 86 O VAL B 125 SHEET 9 E 9 ALA B 103 PRO B 108 -1 O LEU B 107 N VAL B 81 SHEET 1 F 4 ALA B 93 ARG B 95 0 SHEET 2 F 4 ARG B 98 MET B 101 -1 O ARG B 98 N ARG B 95 SHEET 3 F 4 ASN B 209 LEU B 218 1 O ALA B 214 N MET B 101 SHEET 4 F 4 PHE B 224 ASP B 228 -1 O ARG B 225 N GLN B 217 SHEET 1 G 4 ALA B 93 ARG B 95 0 SHEET 2 G 4 ARG B 98 MET B 101 -1 O ARG B 98 N ARG B 95 SHEET 3 G 4 ASN B 209 LEU B 218 1 O ALA B 214 N MET B 101 SHEET 4 G 4 VAL B 235 TRP B 237 -1 O VAL B 235 N TYR B 211 SHEET 1 H 4 THR B 175 HIS B 178 0 SHEET 2 H 4 PHE B 276 GLN B 281 -1 O HIS B 277 N HIS B 178 SHEET 3 H 4 LYS B 193 HIS B 198 -1 N HIS B 194 O GLN B 280 SHEET 4 H 4 LEU B 259 VAL B 263 -1 O LEU B 259 N LEU B 197 LINK NE2 HIS A 178 NI NI A 501 1555 1555 2.53 LINK NE2 HIS A 277 NI NI A 501 1555 1555 2.62 LINK NI NI A 501 O5 AKG A 502 1555 1555 2.50 LINK NI NI A 501 O2 AKG A 502 1555 1555 2.74 LINK NE2 HIS B 178 NI NI B 501 1555 1555 2.52 LINK OD2 ASP B 180 NI NI B 501 1555 1555 2.38 LINK NE2 HIS B 277 NI NI B 501 1555 1555 2.48 LINK NI NI B 501 O5 AKG B 502 1555 1555 2.43 LINK NI NI B 501 O2 AKG B 502 1555 1555 2.61 SITE 1 AC1 4 HIS A 178 ASP A 180 HIS A 277 AKG A 502 SITE 1 AC2 12 TYR A 127 TRP A 167 THR A 175 HIS A 178 SITE 2 AC2 12 ASN A 184 TYR A 186 LYS A 193 HIS A 277 SITE 3 AC2 12 VAL A 279 TRP A 291 NI A 501 HOH A 612 SITE 1 AC3 5 GLN B 131 HIS B 178 ASP B 180 HIS B 277 SITE 2 AC3 5 AKG B 502 SITE 1 AC4 14 TYR B 127 TRP B 167 THR B 175 HIS B 178 SITE 2 AC4 14 ASP B 180 ASN B 184 TYR B 186 LYS B 193 SITE 3 AC4 14 HIS B 277 VAL B 279 ASN B 289 NI B 501 SITE 4 AC4 14 HOH B 611 HOH B 624 CRYST1 53.535 59.516 199.583 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018679 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016802 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005010 0.00000