HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 15-JUL-14 4QVU TITLE CRYSTAL STRUCTURE OF A DUF4931 FAMILY PROTEIN (BCE0241) FROM BACILLUS TITLE 2 CEREUS ATCC 10987 AT 2.65 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS; SOURCE 3 ORGANISM_TAXID: 222523; SOURCE 4 STRAIN: ATCC 10987; SOURCE 5 GENE: BCE_0241; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS HIT-LIKE FOLD, PF16285 FAMILY, DUF4931, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4QVU 1 REMARK SEQADV LINK REVDAT 3 22-NOV-17 4QVU 1 REMARK REVDAT 2 24-DEC-14 4QVU 1 TITLE REVDAT 1 06-AUG-14 4QVU 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BCE0241) FROM JRNL TITL 2 BACILLUS CEREUS ATCC 10987 AT 2.65 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 8971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.200 REMARK 3 FREE R VALUE TEST SET COUNT : 556 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.96 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2470 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2054 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2310 REMARK 3 BIN R VALUE (WORKING SET) : 0.2033 REMARK 3 BIN FREE R VALUE : 0.2347 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.48 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 160 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1715 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 86.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.07580 REMARK 3 B22 (A**2) : -1.07580 REMARK 3 B33 (A**2) : 2.15160 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.409 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1762 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2398 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 792 ; 6.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 44 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 253 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1762 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 2 ; 6.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 247 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1981 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.10 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.27 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.18 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: A 37 A 253 REMARK 3 ORIGIN FOR THE GROUP (A): 35.7484 11.0894 13.0000 REMARK 3 T TENSOR REMARK 3 T11: -0.0562 T22: -0.1773 REMARK 3 T33: -0.1270 T12: -0.0084 REMARK 3 T13: -0.0058 T23: -0.1430 REMARK 3 L TENSOR REMARK 3 L11: 2.4210 L22: 1.5742 REMARK 3 L33: 3.7271 L12: -0.4871 REMARK 3 L13: -1.6994 L23: 0.4500 REMARK 3 S TENSOR REMARK 3 S11: 0.1046 S12: -0.2067 S13: 0.2911 REMARK 3 S21: 0.1343 S22: -0.3472 S23: 0.1788 REMARK 3 S31: -0.3392 S32: -0.3880 S33: 0.2426 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. POLYETHYLENE GLYCOL 200 FRAGMENT (PG4) FROM THE REMARK 3 CRYSTALLIZATION WERE MODELED INTO THE STRUCTURE. 5. THE MODELING REMARK 3 OF ZINC (ZN) INTO THE STRUCTURE IS SUPPORTED BY ANOMALOUS REMARK 3 DIFFERENCE DENSITY. 6. SODIUM (NA) FROM PURIFICATION BUFFER WAS REMARK 3 MODELED INTO THE STRUCTURE. REMARK 4 REMARK 4 4QVU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.47 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9116,0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : RHODIUM-COATED VERTICAL AND REMARK 200 HORIZONTAL FOCUSING MIRRORS; REMARK 200 LIQUID-NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8992 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 29.944 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08600 REMARK 200 FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 0.01300 REMARK 200 R SYM FOR SHELL (I) : 1.26700 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 53.00% POLYETHYLENE GLYCOL 200, 0.1M REMARK 280 HEPES PH 7.47, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.82700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.65400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 31.82700 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 63.65400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 31.82700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 63.65400 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 31.82700 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 63.65400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -213.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 102.04900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 102.04900 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -112.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 ASP A 2 REMARK 465 THR A 3 REMARK 465 GLN A 4 REMARK 465 GLN A 5 REMARK 465 LEU A 6 REMARK 465 TYR A 7 REMARK 465 PHE A 8 REMARK 465 LEU A 9 REMARK 465 ASN A 10 REMARK 465 ASP A 11 REMARK 465 ILE A 12 REMARK 465 GLY A 13 REMARK 465 LYS A 14 REMARK 465 GLN A 15 REMARK 465 LYS A 16 REMARK 465 PRO A 17 REMARK 465 GLU A 18 REMARK 465 SER A 19 REMARK 465 ILE A 20 REMARK 465 ARG A 21 REMARK 465 ASN A 22 REMARK 465 ARG A 23 REMARK 465 SER A 24 REMARK 465 ALA A 25 REMARK 465 ALA A 26 REMARK 465 CYS A 27 REMARK 465 PRO A 28 REMARK 465 PHE A 29 REMARK 465 CYS A 30 REMARK 465 ASP A 31 REMARK 465 ARG A 32 REMARK 465 GLU A 33 REMARK 465 ASN A 34 REMARK 465 LEU A 35 REMARK 465 THR A 36 REMARK 465 GLN A 254 REMARK 465 ASN A 255 REMARK 465 ASP A 256 REMARK 465 ALA A 257 REMARK 465 ILE A 258 REMARK 465 ILE A 259 REMARK 465 HIS A 260 REMARK 465 LYS A 261 REMARK 465 LYS A 262 REMARK 465 ILE A 263 REMARK 465 GLU A 264 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 49 CG CD CE NZ REMARK 470 LYS A 51 CG CD CE NZ REMARK 470 PHE A 52 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 56 CG CD CE NZ REMARK 470 ASP A 57 CG OD1 OD2 REMARK 470 ASP A 67 CG OD1 OD2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLU A 79 CG CD OE1 OE2 REMARK 470 ARG A 82 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 99 CG CD OE1 OE2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 LEU A 118 CG CD1 CD2 REMARK 470 HIS A 119 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 ARG A 160 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 LYS A 253 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 52 73.39 -115.86 REMARK 500 SER A 117 -65.66 -142.74 REMARK 500 PHE A 165 -144.44 -119.77 REMARK 500 SER A 201 -28.41 62.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 301 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 134 O REMARK 620 2 VAL A 137 O 82.0 REMARK 620 3 HOH A 404 O 128.5 86.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 300 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 152 ND1 REMARK 620 2 CYS A 177 SG 102.0 REMARK 620 3 GLU A 180 OE2 110.1 124.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-394177 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE THE CONSTRUCT (RESIDUES 1-264) WAS EXPRESSED WITH A REMARK 999 PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4QVU A 1 264 UNP Q73EW7 Q73EW7_BACC1 1 264 SEQADV 4QVU GLY A 0 UNP Q73EW7 EXPRESSION TAG SEQRES 1 A 265 GLY MSE ASP THR GLN GLN LEU TYR PHE LEU ASN ASP ILE SEQRES 2 A 265 GLY LYS GLN LYS PRO GLU SER ILE ARG ASN ARG SER ALA SEQRES 3 A 265 ALA CYS PRO PHE CYS ASP ARG GLU ASN LEU THR ASP ILE SEQRES 4 A 265 LEU ALA THR GLU GLY SER ILE ILE TRP LEU LYS ASN LYS SEQRES 5 A 265 PHE PRO THR LEU LYS ASP THR PHE GLN THR VAL LEU ILE SEQRES 6 A 265 GLU THR ASP ASN CYS GLU ASP HIS ILE ALA THR TYR THR SEQRES 7 A 265 GLU GLU HIS MSE ARG SER LEU ILE ARG PHE SER ILE LYS SEQRES 8 A 265 HIS TRP LEU ASN LEU GLN LYS ASN GLU GLU PHE THR SER SEQRES 9 A 265 VAL ILE LEU TYR LYS ASN HIS GLY PRO PHE SER GLY GLY SEQRES 10 A 265 SER LEU HIS HIS ALA HIS MSE GLN ILE ILE GLY MSE LYS SEQRES 11 A 265 TYR VAL ASN TYR LEU ASP ASN VAL GLU GLN ASP ASN PHE SEQRES 12 A 265 GLN GLY VAL ILE VAL GLN LYS ASN GLU HIS ILE GLU LEU SEQRES 13 A 265 ASN ILE SER ASP ARG PRO ILE ILE GLY PHE THR GLU PHE SEQRES 14 A 265 ASN ILE ILE ILE GLU ASP ILE GLY CYS ILE ASP GLU LEU SEQRES 15 A 265 ALA ASN TYR ILE GLN GLN THR VAL ARG TYR ILE LEU THR SEQRES 16 A 265 ASP PHE HIS LYS GLY CYS SER SER TYR ASN LEU PHE PHE SEQRES 17 A 265 TYR TYR LEU ASN GLU LYS ILE ILE CYS LYS VAL VAL PRO SEQRES 18 A 265 ARG PHE VAL VAL SER PRO LEU TYR VAL GLY TYR LYS ILE SEQRES 19 A 265 PRO GLN VAL SER THR LYS ILE GLU ASP VAL LYS ILE GLN SEQRES 20 A 265 LEU ALA ALA TYR PHE THR LYS GLN ASN ASP ALA ILE ILE SEQRES 21 A 265 HIS LYS LYS ILE GLU MODRES 4QVU MSE A 81 MET SELENOMETHIONINE MODRES 4QVU MSE A 123 MET SELENOMETHIONINE MODRES 4QVU MSE A 128 MET SELENOMETHIONINE HET MSE A 81 8 HET MSE A 123 8 HET MSE A 128 8 HET ZN A 300 1 HET PG4 A 301 7 HET NA A 302 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM NA SODIUM ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 ZN ZN 2+ FORMUL 3 PG4 C8 H18 O5 FORMUL 4 NA NA 1+ FORMUL 5 HOH *4(H2 O) HELIX 1 1 THR A 77 LYS A 97 1 21 HELIX 2 2 GLU A 138 PHE A 142 5 5 HELIX 3 3 ASP A 174 GLY A 176 5 3 HELIX 4 4 CYS A 177 ASP A 195 1 19 HELIX 5 5 PHE A 196 GLY A 199 5 4 HELIX 6 6 SER A 225 LYS A 232 1 8 HELIX 7 7 LYS A 239 ALA A 249 1 11 SHEET 1 A10 ILE A 38 GLU A 42 0 SHEET 2 A10 ILE A 45 LYS A 49 -1 O TRP A 47 N LEU A 39 SHEET 3 A10 THR A 58 ILE A 64 -1 O VAL A 62 N LEU A 48 SHEET 4 A10 HIS A 122 MSE A 128 -1 O MSE A 123 N LEU A 63 SHEET 5 A10 SER A 103 HIS A 110 -1 N TYR A 107 O GLN A 124 SHEET 6 A10 SER A 202 LEU A 210 -1 O PHE A 207 N LEU A 106 SHEET 7 A10 LYS A 213 ARG A 221 -1 O LYS A 217 N PHE A 206 SHEET 8 A10 PHE A 168 ILE A 172 -1 N PHE A 168 O VAL A 218 SHEET 9 A10 ILE A 153 SER A 158 -1 N GLU A 154 O ILE A 171 SHEET 10 A10 GLY A 144 LYS A 149 -1 N GLN A 148 O LEU A 155 LINK C HIS A 80 N MSE A 81 1555 1555 1.35 LINK C MSE A 81 N ARG A 82 1555 1555 1.35 LINK C HIS A 122 N MSE A 123 1555 1555 1.35 LINK C MSE A 123 N GLN A 124 1555 1555 1.34 LINK C GLY A 127 N MSE A 128 1555 1555 1.34 LINK C MSE A 128 N LYS A 129 1555 1555 1.35 LINK O LEU A 134 NA NA A 302 1555 1555 2.35 LINK O VAL A 137 NA NA A 302 1555 1555 2.24 LINK ND1 HIS A 152 ZN ZN A 300 1555 1555 2.29 LINK SG CYS A 177 ZN ZN A 300 1555 1555 2.39 LINK OE2 GLU A 180 ZN ZN A 300 1555 1555 2.02 LINK NA NA A 302 O HOH A 404 1555 1555 2.57 SITE 1 AC1 3 HIS A 152 CYS A 177 GLU A 180 SITE 1 AC2 5 PHE A 142 GLN A 143 GLU A 154 ASN A 211 SITE 2 AC2 5 LYS A 213 SITE 1 AC3 4 LEU A 134 ASP A 135 VAL A 137 HOH A 404 CRYST1 102.049 102.049 95.481 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009799 0.005658 0.000000 0.00000 SCALE2 0.000000 0.011315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010473 0.00000