data_4QXA # _entry.id 4QXA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QXA pdb_00004qxa 10.2210/pdb4qxa/pdb RCSB RCSB086629 ? ? WWPDB D_1000086629 ? ? # _pdbx_database_status.entry_id 4QXA _pdbx_database_status.status_code REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2014-07-19 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, Z.' 1 'Wang, S.' 2 'Ding, J.' 3 # _citation.id primary _citation.title 'Crystal structure of the Rab9A-RUTBC2 RBD complex reveals the molecular basis for the binding specificity of Rab9A with RUTBC2.' _citation.journal_abbrev Structure _citation.journal_volume 22 _citation.page_first 1408 _citation.page_last 1420 _citation.year 2014 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25220469 _citation.pdbx_database_id_DOI 10.1016/j.str.2014.08.005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Z.' 1 ? primary 'Wang, S.' 2 ? primary 'Shen, T.' 3 ? primary 'Chen, J.' 4 ? primary 'Ding, J.' 5 ? # _cell.length_a 52.776 _cell.length_b 59.944 _cell.length_c 127.840 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4QXA _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4QXA _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-9A' 23918.771 1 ? Q66L 'UNP residues 1-199' ? 2 polymer man 'Small G protein signaling modulator 1' 20403.002 1 ? ? 'UNP residues 254-425' ? 3 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 5 water nat water 18.015 104 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Rab9A, Sid 99' 2 'RUTBC2 RBD, RUN and TBC1 domain-containing protein 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MMAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLERFRSLRTPFYRG SDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDST NVAAAFEEAVRRILATEDRSEHLIQTDTVNLHRKPKPNSSLEHHHHHH ; ;MMAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLERFRSLRTPFYRG SDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDST NVAAAFEEAVRRILATEDRSEHLIQTDTVNLHRKPKPNSSLEHHHHHH ; A ? 2 'polypeptide(L)' no no ;MAHHHHHHATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGSVGDLDYEKSVYWDYAVTIRLEEIVY LHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSSEST SSDKEDDEATDYVFRIIYPG ; ;MAHHHHHHATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGSVGDLDYEKSVYWDYAVTIRLEEIVY LHCHQQVDSGGTVVLVSQDGIQRPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSSEST SSDKEDDEATDYVFRIIYPG ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 MET n 1 3 ALA n 1 4 GLY n 1 5 LYS n 1 6 SER n 1 7 SER n 1 8 LEU n 1 9 PHE n 1 10 LYS n 1 11 ILE n 1 12 ILE n 1 13 LEU n 1 14 LEU n 1 15 GLY n 1 16 ASP n 1 17 GLY n 1 18 GLY n 1 19 VAL n 1 20 GLY n 1 21 LYS n 1 22 SER n 1 23 SER n 1 24 LEU n 1 25 MET n 1 26 ASN n 1 27 ARG n 1 28 TYR n 1 29 VAL n 1 30 THR n 1 31 ASN n 1 32 LYS n 1 33 PHE n 1 34 ASP n 1 35 SER n 1 36 GLN n 1 37 LEU n 1 38 PHE n 1 39 HIS n 1 40 THR n 1 41 ILE n 1 42 GLY n 1 43 VAL n 1 44 GLU n 1 45 PHE n 1 46 LEU n 1 47 ASN n 1 48 LYS n 1 49 ASP n 1 50 LEU n 1 51 GLU n 1 52 VAL n 1 53 ASP n 1 54 GLY n 1 55 HIS n 1 56 PHE n 1 57 VAL n 1 58 THR n 1 59 MET n 1 60 GLN n 1 61 ILE n 1 62 TRP n 1 63 ASP n 1 64 THR n 1 65 ALA n 1 66 GLY n 1 67 LEU n 1 68 GLU n 1 69 ARG n 1 70 PHE n 1 71 ARG n 1 72 SER n 1 73 LEU n 1 74 ARG n 1 75 THR n 1 76 PRO n 1 77 PHE n 1 78 TYR n 1 79 ARG n 1 80 GLY n 1 81 SER n 1 82 ASP n 1 83 CYS n 1 84 CYS n 1 85 LEU n 1 86 LEU n 1 87 THR n 1 88 PHE n 1 89 SER n 1 90 VAL n 1 91 ASP n 1 92 ASP n 1 93 SER n 1 94 GLN n 1 95 SER n 1 96 PHE n 1 97 GLN n 1 98 ASN n 1 99 LEU n 1 100 SER n 1 101 ASN n 1 102 TRP n 1 103 LYS n 1 104 LYS n 1 105 GLU n 1 106 PHE n 1 107 ILE n 1 108 TYR n 1 109 TYR n 1 110 ALA n 1 111 ASP n 1 112 VAL n 1 113 LYS n 1 114 GLU n 1 115 PRO n 1 116 GLU n 1 117 SER n 1 118 PHE n 1 119 PRO n 1 120 PHE n 1 121 VAL n 1 122 ILE n 1 123 LEU n 1 124 GLY n 1 125 ASN n 1 126 LYS n 1 127 THR n 1 128 ASP n 1 129 ILE n 1 130 LYS n 1 131 GLU n 1 132 ARG n 1 133 GLN n 1 134 VAL n 1 135 SER n 1 136 THR n 1 137 GLU n 1 138 GLU n 1 139 ALA n 1 140 GLN n 1 141 ALA n 1 142 TRP n 1 143 CYS n 1 144 LYS n 1 145 ASP n 1 146 ASN n 1 147 GLY n 1 148 ASP n 1 149 TYR n 1 150 PRO n 1 151 TYR n 1 152 PHE n 1 153 GLU n 1 154 THR n 1 155 SER n 1 156 ALA n 1 157 LYS n 1 158 ASP n 1 159 SER n 1 160 THR n 1 161 ASN n 1 162 VAL n 1 163 ALA n 1 164 ALA n 1 165 ALA n 1 166 PHE n 1 167 GLU n 1 168 GLU n 1 169 ALA n 1 170 VAL n 1 171 ARG n 1 172 ARG n 1 173 ILE n 1 174 LEU n 1 175 ALA n 1 176 THR n 1 177 GLU n 1 178 ASP n 1 179 ARG n 1 180 SER n 1 181 GLU n 1 182 HIS n 1 183 LEU n 1 184 ILE n 1 185 GLN n 1 186 THR n 1 187 ASP n 1 188 THR n 1 189 VAL n 1 190 ASN n 1 191 LEU n 1 192 HIS n 1 193 ARG n 1 194 LYS n 1 195 PRO n 1 196 LYS n 1 197 PRO n 1 198 ASN n 1 199 SER n 1 200 SER n 1 201 LEU n 1 202 GLU n 1 203 HIS n 1 204 HIS n 1 205 HIS n 1 206 HIS n 1 207 HIS n 1 208 HIS n 2 1 MET n 2 2 ALA n 2 3 HIS n 2 4 HIS n 2 5 HIS n 2 6 HIS n 2 7 HIS n 2 8 HIS n 2 9 ALA n 2 10 THR n 2 11 LEU n 2 12 LEU n 2 13 TYR n 2 14 GLY n 2 15 LYS n 2 16 ASN n 2 17 ASN n 2 18 VAL n 2 19 LEU n 2 20 VAL n 2 21 GLN n 2 22 PRO n 2 23 ARG n 2 24 ASP n 2 25 ASP n 2 26 MET n 2 27 GLU n 2 28 ALA n 2 29 VAL n 2 30 PRO n 2 31 GLY n 2 32 TYR n 2 33 LEU n 2 34 SER n 2 35 LEU n 2 36 HIS n 2 37 GLN n 2 38 THR n 2 39 ALA n 2 40 ASP n 2 41 VAL n 2 42 MET n 2 43 THR n 2 44 LEU n 2 45 LYS n 2 46 TRP n 2 47 THR n 2 48 PRO n 2 49 ASN n 2 50 GLN n 2 51 LEU n 2 52 MET n 2 53 ASN n 2 54 GLY n 2 55 SER n 2 56 VAL n 2 57 GLY n 2 58 ASP n 2 59 LEU n 2 60 ASP n 2 61 TYR n 2 62 GLU n 2 63 LYS n 2 64 SER n 2 65 VAL n 2 66 TYR n 2 67 TRP n 2 68 ASP n 2 69 TYR n 2 70 ALA n 2 71 VAL n 2 72 THR n 2 73 ILE n 2 74 ARG n 2 75 LEU n 2 76 GLU n 2 77 GLU n 2 78 ILE n 2 79 VAL n 2 80 TYR n 2 81 LEU n 2 82 HIS n 2 83 CYS n 2 84 HIS n 2 85 GLN n 2 86 GLN n 2 87 VAL n 2 88 ASP n 2 89 SER n 2 90 GLY n 2 91 GLY n 2 92 THR n 2 93 VAL n 2 94 VAL n 2 95 LEU n 2 96 VAL n 2 97 SER n 2 98 GLN n 2 99 ASP n 2 100 GLY n 2 101 ILE n 2 102 GLN n 2 103 ARG n 2 104 PRO n 2 105 PRO n 2 106 PHE n 2 107 ARG n 2 108 PHE n 2 109 PRO n 2 110 LYS n 2 111 GLY n 2 112 GLY n 2 113 HIS n 2 114 LEU n 2 115 LEU n 2 116 GLN n 2 117 PHE n 2 118 LEU n 2 119 SER n 2 120 CYS n 2 121 LEU n 2 122 GLU n 2 123 ASN n 2 124 GLY n 2 125 LEU n 2 126 LEU n 2 127 PRO n 2 128 HIS n 2 129 GLY n 2 130 GLN n 2 131 LEU n 2 132 ASP n 2 133 PRO n 2 134 PRO n 2 135 LEU n 2 136 TRP n 2 137 SER n 2 138 GLN n 2 139 ARG n 2 140 GLY n 2 141 LYS n 2 142 GLY n 2 143 LYS n 2 144 VAL n 2 145 PHE n 2 146 PRO n 2 147 LYS n 2 148 LEU n 2 149 ARG n 2 150 LYS n 2 151 ARG n 2 152 SER n 2 153 PRO n 2 154 GLN n 2 155 GLY n 2 156 SER n 2 157 SER n 2 158 GLU n 2 159 SER n 2 160 THR n 2 161 SER n 2 162 SER n 2 163 ASP n 2 164 LYS n 2 165 GLU n 2 166 ASP n 2 167 ASP n 2 168 GLU n 2 169 ALA n 2 170 THR n 2 171 ASP n 2 172 TYR n 2 173 VAL n 2 174 PHE n 2 175 ARG n 2 176 ILE n 2 177 ILE n 2 178 TYR n 2 179 PRO n 2 180 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? mouse ? 'Rab9a, Rab9, Sid99' ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3) codon plus' ? ? ? ? ? ? ? plasmid ? ? ? pET22b ? ? 2 1 sample ? ? ? mouse ? 'Sgsm1, Rutbc2' ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21(DE3) codon plus' ? ? ? ? ? ? ? plasmid ? ? ? pET28a ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RAB9A_MOUSE Q9R0M6 1 ;MAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGS DCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTN VAAAFEEAVRRILATEDRSEHLIQTDTVNLHRKPKPNSS ; 1 ? 2 UNP SGSM1_MOUSE Q8BPQ7 2 ;ATLLYGKNNVLVQPRDDMEAVPGYLSLHQTADVMTLKWTPNQLMNGSVGDLDYEKSVYWDYAVTIRLEEIVYLHCHQQVD SGGTVVLVSQDGIQRPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKRSPQGSSESTSSDKEDDE ATDYVFRIIYPG ; 254 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QXA A 2 ? 200 ? Q9R0M6 1 ? 199 ? 1 199 2 2 4QXA B 9 ? 180 ? Q8BPQ7 254 ? 425 ? 254 425 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QXA MET A 1 ? UNP Q9R0M6 ? ? 'expression tag' 0 1 1 4QXA LEU A 67 ? UNP Q9R0M6 GLN 66 'engineered mutation' 66 2 1 4QXA LEU A 201 ? UNP Q9R0M6 ? ? 'expression tag' 200 3 1 4QXA GLU A 202 ? UNP Q9R0M6 ? ? 'expression tag' 201 4 1 4QXA HIS A 203 ? UNP Q9R0M6 ? ? 'expression tag' 202 5 1 4QXA HIS A 204 ? UNP Q9R0M6 ? ? 'expression tag' 203 6 1 4QXA HIS A 205 ? UNP Q9R0M6 ? ? 'expression tag' 204 7 1 4QXA HIS A 206 ? UNP Q9R0M6 ? ? 'expression tag' 205 8 1 4QXA HIS A 207 ? UNP Q9R0M6 ? ? 'expression tag' 206 9 1 4QXA HIS A 208 ? UNP Q9R0M6 ? ? 'expression tag' 207 10 2 4QXA MET B 1 ? UNP Q8BPQ7 ? ? 'expression tag' 246 11 2 4QXA ALA B 2 ? UNP Q8BPQ7 ? ? 'expression tag' 247 12 2 4QXA HIS B 3 ? UNP Q8BPQ7 ? ? 'expression tag' 248 13 2 4QXA HIS B 4 ? UNP Q8BPQ7 ? ? 'expression tag' 249 14 2 4QXA HIS B 5 ? UNP Q8BPQ7 ? ? 'expression tag' 250 15 2 4QXA HIS B 6 ? UNP Q8BPQ7 ? ? 'expression tag' 251 16 2 4QXA HIS B 7 ? UNP Q8BPQ7 ? ? 'expression tag' 252 17 2 4QXA HIS B 8 ? UNP Q8BPQ7 ? ? 'expression tag' 253 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4QXA _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 0.960 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 46.08 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details '0.2M ammonium acetate, 0.1M sodium acetate, 20% (w/v) PEG 4000, pH 5.0, vapor diffusion, hanging drop, temperature 289K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-12-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9789 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_wavelength_list 0.9789 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U # _reflns.entry_id 4QXA _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 50.000 _reflns.number_obs 18655 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_netI_over_sigmaI 12.900 _reflns.pdbx_chi_squared 1.128 _reflns.pdbx_redundancy 5.700 _reflns.percent_possible_obs 98.700 _reflns.B_iso_Wilson_estimate 39.800 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.380 ? ? ? 0 0.354 ? ? 0.946 6.000 ? ? ? 1822 ? ? ? ? 100.000 ? ? 1 1 2.380 2.480 ? ? ? 0 0.289 ? ? 0.936 6.000 ? ? ? 1859 ? ? ? ? 100.000 ? ? 2 1 2.480 2.590 ? ? ? 0 0.212 ? ? 1.003 5.900 ? ? ? 1854 ? ? ? ? 100.000 ? ? 3 1 2.590 2.730 ? ? ? 0 0.157 ? ? 1.108 5.900 ? ? ? 1866 ? ? ? ? 100.000 ? ? 4 1 2.730 2.900 ? ? ? 0 0.120 ? ? 1.135 5.900 ? ? ? 1864 ? ? ? ? 100.000 ? ? 5 1 2.900 3.120 ? ? ? 0 0.087 ? ? 1.378 5.900 ? ? ? 1874 ? ? ? ? 99.900 ? ? 6 1 3.120 3.440 ? ? ? 0 0.069 ? ? 1.013 5.900 ? ? ? 1867 ? ? ? ? 99.900 ? ? 7 1 3.440 3.930 ? ? ? 0 0.079 ? ? 1.339 5.600 ? ? ? 1896 ? ? ? ? 99.500 ? ? 8 1 3.930 4.950 ? ? ? 0 0.071 ? ? 1.478 5.300 ? ? ? 1850 ? ? ? ? 95.800 ? ? 9 1 4.950 50.000 ? ? ? 0 0.044 ? ? 0.984 5.200 ? ? ? 1903 ? ? ? ? 92.800 ? ? 10 1 # _refine.entry_id 4QXA _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 43.7250 _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.6800 _refine.ls_number_reflns_obs 18429 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1831 _refine.ls_R_factor_R_work 0.1806 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2328 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.2100 _refine.ls_number_reflns_R_free 961 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 56.3300 _refine.solvent_model_param_bsol 61.0400 _refine.solvent_model_param_ksol 0.3410 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 17.3212 _refine.aniso_B[2][2] -11.0952 _refine.aniso_B[3][3] -6.2260 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.6500 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7300 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 1YZL _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8374 _refine.B_iso_max 158.170 _refine.B_iso_min 18.640 _refine.pdbx_overall_phase_error 22.2700 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2559 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 104 _refine_hist.number_atoms_total 2696 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 43.7250 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2655 0.009 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3608 1.216 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 389 0.087 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 461 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 966 19.308 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.3000 2.4213 7 100.0000 2467 . 0.2251 0.2979 . 150 . 2617 . 'X-RAY DIFFRACTION' . 2.4213 2.5729 7 100.0000 2458 . 0.2152 0.3044 . 147 . 2605 . 'X-RAY DIFFRACTION' . 2.5729 2.7716 7 100.0000 2492 . 0.1976 0.2996 . 141 . 2633 . 'X-RAY DIFFRACTION' . 2.7716 3.0504 7 100.0000 2496 . 0.1916 0.2410 . 135 . 2631 . 'X-RAY DIFFRACTION' . 3.0504 3.4917 7 100.0000 2510 . 0.1678 0.2319 . 148 . 2658 . 'X-RAY DIFFRACTION' . 3.4917 4.3985 7 98.0000 2527 . 0.1669 0.2232 . 126 . 2653 . 'X-RAY DIFFRACTION' . 4.3985 43.7328 7 93.0000 2518 . 0.1759 0.1834 . 114 . 2632 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4QXA _struct.title 'Crystal structure of the Rab9A-RUTBC2 RBD complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QXA _struct_keywords.text 'PH domain, Rab9A, RUTBC2, Rab binding domain, Rab9-effector complex, PROTEIN TRANSPORT-PROTEIN BINDING complex' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT/PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 20 ? ASN A 31 ? GLY A 19 ASN A 30 1 ? 12 HELX_P HELX_P2 2 LEU A 67 ? ARG A 69 ? LEU A 66 ARG A 68 5 ? 3 HELX_P HELX_P3 3 PHE A 70 ? THR A 75 ? PHE A 69 THR A 74 1 ? 6 HELX_P HELX_P4 4 PRO A 76 ? TYR A 78 ? PRO A 75 TYR A 77 5 ? 3 HELX_P HELX_P5 5 ASP A 92 ? ASN A 98 ? ASP A 91 ASN A 97 1 ? 7 HELX_P HELX_P6 6 ASN A 98 ? ASP A 111 ? ASN A 97 ASP A 110 1 ? 14 HELX_P HELX_P7 7 SER A 135 ? ASP A 145 ? SER A 134 ASP A 144 1 ? 11 HELX_P HELX_P8 8 ASN A 161 ? GLU A 177 ? ASN A 160 GLU A 176 1 ? 17 HELX_P HELX_P9 9 GLN B 50 ? MET B 52 ? GLN B 295 MET B 297 5 ? 3 HELX_P HELX_P10 10 ASP B 60 ? TYR B 69 ? ASP B 305 TYR B 314 5 ? 10 HELX_P HELX_P11 11 GLY B 112 ? LEU B 126 ? GLY B 357 LEU B 371 1 ? 15 HELX_P HELX_P12 12 GLN B 138 ? GLY B 142 ? GLN B 383 GLY B 387 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 22 OG ? ? ? 1_555 D MG . MG ? ? A SER 21 A MG 302 1_555 ? ? ? ? ? ? ? 2.520 ? ? metalc2 metalc ? ? A THR 40 OG1 ? ? ? 1_555 D MG . MG ? ? A THR 39 A MG 302 1_555 ? ? ? ? ? ? ? 2.448 ? ? metalc3 metalc ? ? C GTP . O2B ? ? ? 1_555 D MG . MG ? ? A GTP 301 A MG 302 1_555 ? ? ? ? ? ? ? 2.393 ? ? metalc4 metalc ? ? C GTP . O1G ? ? ? 1_555 D MG . MG ? ? A GTP 301 A MG 302 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 302 A HOH 446 1_555 ? ? ? ? ? ? ? 2.507 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 302 A HOH 447 1_555 ? ? ? ? ? ? ? 2.428 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 126 B . ? LEU 371 B PRO 127 B ? PRO 372 B 1 0.54 2 ASP 132 B . ? ASP 377 B PRO 133 B ? PRO 378 B 1 -2.18 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 44 ? VAL A 52 ? GLU A 43 VAL A 51 A 2 HIS A 55 ? ASP A 63 ? HIS A 54 ASP A 62 A 3 LEU A 8 ? GLY A 15 ? LEU A 7 GLY A 14 A 4 CYS A 83 ? SER A 89 ? CYS A 82 SER A 88 A 5 PHE A 120 ? ASN A 125 ? PHE A 119 ASN A 124 A 6 TYR A 151 ? GLU A 153 ? TYR A 150 GLU A 152 B 1 THR B 10 ? VAL B 20 ? THR B 255 VAL B 265 B 2 VAL B 29 ? GLN B 37 ? VAL B 274 GLN B 282 B 3 MET B 42 ? PRO B 48 ? MET B 287 PRO B 293 B 4 VAL B 71 ? ARG B 74 ? VAL B 316 ARG B 319 C 1 PHE B 106 ? ARG B 107 ? PHE B 351 ARG B 352 C 2 THR B 92 ? SER B 97 ? THR B 337 SER B 342 C 3 ILE B 78 ? HIS B 84 ? ILE B 323 HIS B 329 C 4 ASP B 171 ? ILE B 177 ? ASP B 416 ILE B 422 C 5 GLN B 130 ? ASP B 132 ? GLN B 375 ASP B 377 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 44 ? N GLU A 43 O ASP A 63 ? O ASP A 62 A 2 3 O TRP A 62 ? O TRP A 61 N ILE A 11 ? N ILE A 10 A 3 4 N LEU A 14 ? N LEU A 13 O THR A 87 ? O THR A 86 A 4 5 N PHE A 88 ? N PHE A 87 O ASN A 125 ? O ASN A 124 A 5 6 N GLY A 124 ? N GLY A 123 O PHE A 152 ? O PHE A 151 B 1 2 N THR B 10 ? N THR B 255 O GLN B 37 ? O GLN B 282 B 2 3 N HIS B 36 ? N HIS B 281 O THR B 43 ? O THR B 288 B 3 4 N LEU B 44 ? N LEU B 289 O ILE B 73 ? O ILE B 318 C 1 2 O PHE B 106 ? O PHE B 351 N VAL B 93 ? N VAL B 338 C 2 3 O VAL B 96 ? O VAL B 341 N TYR B 80 ? N TYR B 325 C 3 4 N LEU B 81 ? N LEU B 326 O PHE B 174 ? O PHE B 419 C 4 5 O ILE B 177 ? O ILE B 422 N GLN B 130 ? N GLN B 375 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GTP 301 ? 29 'BINDING SITE FOR RESIDUE GTP A 301' AC2 Software A MG 302 ? 5 'BINDING SITE FOR RESIDUE MG A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 29 GLY A 17 ? GLY A 16 . ? 1_555 ? 2 AC1 29 GLY A 18 ? GLY A 17 . ? 1_555 ? 3 AC1 29 VAL A 19 ? VAL A 18 . ? 1_555 ? 4 AC1 29 GLY A 20 ? GLY A 19 . ? 1_555 ? 5 AC1 29 LYS A 21 ? LYS A 20 . ? 1_555 ? 6 AC1 29 SER A 22 ? SER A 21 . ? 1_555 ? 7 AC1 29 SER A 23 ? SER A 22 . ? 1_555 ? 8 AC1 29 PHE A 33 ? PHE A 32 . ? 1_555 ? 9 AC1 29 ASP A 34 ? ASP A 33 . ? 1_555 ? 10 AC1 29 SER A 35 ? SER A 34 . ? 1_555 ? 11 AC1 29 GLN A 36 ? GLN A 35 . ? 1_555 ? 12 AC1 29 LEU A 37 ? LEU A 36 . ? 1_555 ? 13 AC1 29 HIS A 39 ? HIS A 38 . ? 1_555 ? 14 AC1 29 THR A 40 ? THR A 39 . ? 1_555 ? 15 AC1 29 GLY A 66 ? GLY A 65 . ? 1_555 ? 16 AC1 29 ASN A 125 ? ASN A 124 . ? 1_555 ? 17 AC1 29 LYS A 126 ? LYS A 125 . ? 1_555 ? 18 AC1 29 ASP A 128 ? ASP A 127 . ? 1_555 ? 19 AC1 29 ILE A 129 ? ILE A 128 . ? 1_555 ? 20 AC1 29 SER A 155 ? SER A 154 . ? 1_555 ? 21 AC1 29 ALA A 156 ? ALA A 155 . ? 1_555 ? 22 AC1 29 LYS A 157 ? LYS A 156 . ? 1_555 ? 23 AC1 29 MG D . ? MG A 302 . ? 1_555 ? 24 AC1 29 HOH E . ? HOH A 411 . ? 1_555 ? 25 AC1 29 HOH E . ? HOH A 416 . ? 1_555 ? 26 AC1 29 HOH E . ? HOH A 424 . ? 1_555 ? 27 AC1 29 HOH E . ? HOH A 425 . ? 4_455 ? 28 AC1 29 HOH E . ? HOH A 447 . ? 1_555 ? 29 AC1 29 HOH E . ? HOH A 452 . ? 4_455 ? 30 AC2 5 SER A 22 ? SER A 21 . ? 1_555 ? 31 AC2 5 THR A 40 ? THR A 39 . ? 1_555 ? 32 AC2 5 GTP C . ? GTP A 301 . ? 1_555 ? 33 AC2 5 HOH E . ? HOH A 446 . ? 1_555 ? 34 AC2 5 HOH E . ? HOH A 447 . ? 1_555 ? # _atom_sites.entry_id 4QXA _atom_sites.fract_transf_matrix[1][1] 0.018948 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016682 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007822 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 ALA 3 2 ? ? ? A . n A 1 4 GLY 4 3 ? ? ? A . n A 1 5 LYS 5 4 ? ? ? A . n A 1 6 SER 6 5 ? ? ? A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 PHE 9 8 8 PHE PHE A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 ILE 12 11 11 ILE ILE A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 ASP 16 15 15 ASP ASP A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 GLY 18 17 17 GLY GLY A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 LYS 21 20 20 LYS LYS A . n A 1 22 SER 22 21 21 SER SER A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 MET 25 24 24 MET MET A . n A 1 26 ASN 26 25 25 ASN ASN A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 TYR 28 27 27 TYR TYR A . n A 1 29 VAL 29 28 28 VAL VAL A . n A 1 30 THR 30 29 29 THR THR A . n A 1 31 ASN 31 30 30 ASN ASN A . n A 1 32 LYS 32 31 31 LYS LYS A . n A 1 33 PHE 33 32 32 PHE PHE A . n A 1 34 ASP 34 33 33 ASP ASP A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 GLN 36 35 35 GLN GLN A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 PHE 38 37 37 PHE PHE A . n A 1 39 HIS 39 38 38 HIS HIS A . n A 1 40 THR 40 39 39 THR THR A . n A 1 41 ILE 41 40 40 ILE ILE A . n A 1 42 GLY 42 41 41 GLY GLY A . n A 1 43 VAL 43 42 42 VAL VAL A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 PHE 45 44 44 PHE PHE A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 ASN 47 46 46 ASN ASN A . n A 1 48 LYS 48 47 47 LYS LYS A . n A 1 49 ASP 49 48 48 ASP ASP A . n A 1 50 LEU 50 49 49 LEU LEU A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 ASP 53 52 52 ASP ASP A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 HIS 55 54 54 HIS HIS A . n A 1 56 PHE 56 55 55 PHE PHE A . n A 1 57 VAL 57 56 56 VAL VAL A . n A 1 58 THR 58 57 57 THR THR A . n A 1 59 MET 59 58 58 MET MET A . n A 1 60 GLN 60 59 59 GLN GLN A . n A 1 61 ILE 61 60 60 ILE ILE A . n A 1 62 TRP 62 61 61 TRP TRP A . n A 1 63 ASP 63 62 62 ASP ASP A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 ALA 65 64 64 ALA ALA A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 GLU 68 67 67 GLU GLU A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 PHE 70 69 69 PHE PHE A . n A 1 71 ARG 71 70 70 ARG ARG A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 ARG 74 73 73 ARG ARG A . n A 1 75 THR 75 74 74 THR THR A . n A 1 76 PRO 76 75 75 PRO PRO A . n A 1 77 PHE 77 76 76 PHE PHE A . n A 1 78 TYR 78 77 77 TYR TYR A . n A 1 79 ARG 79 78 78 ARG ARG A . n A 1 80 GLY 80 79 79 GLY GLY A . n A 1 81 SER 81 80 80 SER SER A . n A 1 82 ASP 82 81 81 ASP ASP A . n A 1 83 CYS 83 82 82 CYS CYS A . n A 1 84 CYS 84 83 83 CYS CYS A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 LEU 86 85 85 LEU LEU A . n A 1 87 THR 87 86 86 THR THR A . n A 1 88 PHE 88 87 87 PHE PHE A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 ASP 92 91 91 ASP ASP A . n A 1 93 SER 93 92 92 SER SER A . n A 1 94 GLN 94 93 93 GLN GLN A . n A 1 95 SER 95 94 94 SER SER A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 GLN 97 96 96 GLN GLN A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 SER 100 99 99 SER SER A . n A 1 101 ASN 101 100 100 ASN ASN A . n A 1 102 TRP 102 101 101 TRP TRP A . n A 1 103 LYS 103 102 102 LYS LYS A . n A 1 104 LYS 104 103 103 LYS LYS A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 PHE 106 105 105 PHE PHE A . n A 1 107 ILE 107 106 106 ILE ILE A . n A 1 108 TYR 108 107 107 TYR TYR A . n A 1 109 TYR 109 108 108 TYR TYR A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 LYS 113 112 112 LYS LYS A . n A 1 114 GLU 114 113 113 GLU GLU A . n A 1 115 PRO 115 114 114 PRO PRO A . n A 1 116 GLU 116 115 115 GLU GLU A . n A 1 117 SER 117 116 116 SER SER A . n A 1 118 PHE 118 117 117 PHE PHE A . n A 1 119 PRO 119 118 118 PRO PRO A . n A 1 120 PHE 120 119 119 PHE PHE A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 ASN 125 124 124 ASN ASN A . n A 1 126 LYS 126 125 125 LYS LYS A . n A 1 127 THR 127 126 126 THR THR A . n A 1 128 ASP 128 127 127 ASP ASP A . n A 1 129 ILE 129 128 128 ILE ILE A . n A 1 130 LYS 130 129 129 LYS LYS A . n A 1 131 GLU 131 130 130 GLU GLU A . n A 1 132 ARG 132 131 131 ARG ARG A . n A 1 133 GLN 133 132 132 GLN GLN A . n A 1 134 VAL 134 133 133 VAL VAL A . n A 1 135 SER 135 134 134 SER SER A . n A 1 136 THR 136 135 135 THR THR A . n A 1 137 GLU 137 136 136 GLU GLU A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 ALA 139 138 138 ALA ALA A . n A 1 140 GLN 140 139 139 GLN GLN A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 TRP 142 141 141 TRP TRP A . n A 1 143 CYS 143 142 142 CYS CYS A . n A 1 144 LYS 144 143 143 LYS LYS A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 ASN 146 145 145 ASN ASN A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 ASP 148 147 147 ASP ASP A . n A 1 149 TYR 149 148 148 TYR TYR A . n A 1 150 PRO 150 149 149 PRO PRO A . n A 1 151 TYR 151 150 150 TYR TYR A . n A 1 152 PHE 152 151 151 PHE PHE A . n A 1 153 GLU 153 152 152 GLU GLU A . n A 1 154 THR 154 153 153 THR THR A . n A 1 155 SER 155 154 154 SER SER A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 LYS 157 156 156 LYS LYS A . n A 1 158 ASP 158 157 157 ASP ASP A . n A 1 159 SER 159 158 158 SER SER A . n A 1 160 THR 160 159 159 THR THR A . n A 1 161 ASN 161 160 160 ASN ASN A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 ALA 163 162 162 ALA ALA A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 ALA 165 164 164 ALA ALA A . n A 1 166 PHE 166 165 165 PHE PHE A . n A 1 167 GLU 167 166 166 GLU GLU A . n A 1 168 GLU 168 167 167 GLU GLU A . n A 1 169 ALA 169 168 168 ALA ALA A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 ARG 171 170 170 ARG ARG A . n A 1 172 ARG 172 171 171 ARG ARG A . n A 1 173 ILE 173 172 172 ILE ILE A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 ALA 175 174 174 ALA ALA A . n A 1 176 THR 176 175 175 THR THR A . n A 1 177 GLU 177 176 176 GLU GLU A . n A 1 178 ASP 178 177 177 ASP ASP A . n A 1 179 ARG 179 178 ? ? ? A . n A 1 180 SER 180 179 ? ? ? A . n A 1 181 GLU 181 180 ? ? ? A . n A 1 182 HIS 182 181 ? ? ? A . n A 1 183 LEU 183 182 ? ? ? A . n A 1 184 ILE 184 183 ? ? ? A . n A 1 185 GLN 185 184 ? ? ? A . n A 1 186 THR 186 185 ? ? ? A . n A 1 187 ASP 187 186 ? ? ? A . n A 1 188 THR 188 187 ? ? ? A . n A 1 189 VAL 189 188 ? ? ? A . n A 1 190 ASN 190 189 ? ? ? A . n A 1 191 LEU 191 190 ? ? ? A . n A 1 192 HIS 192 191 ? ? ? A . n A 1 193 ARG 193 192 ? ? ? A . n A 1 194 LYS 194 193 ? ? ? A . n A 1 195 PRO 195 194 ? ? ? A . n A 1 196 LYS 196 195 ? ? ? A . n A 1 197 PRO 197 196 ? ? ? A . n A 1 198 ASN 198 197 ? ? ? A . n A 1 199 SER 199 198 ? ? ? A . n A 1 200 SER 200 199 ? ? ? A . n A 1 201 LEU 201 200 ? ? ? A . n A 1 202 GLU 202 201 ? ? ? A . n A 1 203 HIS 203 202 ? ? ? A . n A 1 204 HIS 204 203 ? ? ? A . n A 1 205 HIS 205 204 ? ? ? A . n A 1 206 HIS 206 205 ? ? ? A . n A 1 207 HIS 207 206 ? ? ? A . n A 1 208 HIS 208 207 ? ? ? A . n B 2 1 MET 1 246 ? ? ? B . n B 2 2 ALA 2 247 ? ? ? B . n B 2 3 HIS 3 248 ? ? ? B . n B 2 4 HIS 4 249 ? ? ? B . n B 2 5 HIS 5 250 ? ? ? B . n B 2 6 HIS 6 251 ? ? ? B . n B 2 7 HIS 7 252 ? ? ? B . n B 2 8 HIS 8 253 ? ? ? B . n B 2 9 ALA 9 254 254 ALA ALA B . n B 2 10 THR 10 255 255 THR THR B . n B 2 11 LEU 11 256 256 LEU LEU B . n B 2 12 LEU 12 257 257 LEU LEU B . n B 2 13 TYR 13 258 258 TYR TYR B . n B 2 14 GLY 14 259 259 GLY GLY B . n B 2 15 LYS 15 260 260 LYS LYS B . n B 2 16 ASN 16 261 261 ASN ASN B . n B 2 17 ASN 17 262 262 ASN ASN B . n B 2 18 VAL 18 263 263 VAL VAL B . n B 2 19 LEU 19 264 264 LEU LEU B . n B 2 20 VAL 20 265 265 VAL VAL B . n B 2 21 GLN 21 266 266 GLN GLN B . n B 2 22 PRO 22 267 267 PRO PRO B . n B 2 23 ARG 23 268 268 ARG ARG B . n B 2 24 ASP 24 269 269 ASP ASP B . n B 2 25 ASP 25 270 270 ASP ASP B . n B 2 26 MET 26 271 271 MET MET B . n B 2 27 GLU 27 272 272 GLU GLU B . n B 2 28 ALA 28 273 273 ALA ALA B . n B 2 29 VAL 29 274 274 VAL VAL B . n B 2 30 PRO 30 275 275 PRO PRO B . n B 2 31 GLY 31 276 276 GLY GLY B . n B 2 32 TYR 32 277 277 TYR TYR B . n B 2 33 LEU 33 278 278 LEU LEU B . n B 2 34 SER 34 279 279 SER SER B . n B 2 35 LEU 35 280 280 LEU LEU B . n B 2 36 HIS 36 281 281 HIS HIS B . n B 2 37 GLN 37 282 282 GLN GLN B . n B 2 38 THR 38 283 283 THR THR B . n B 2 39 ALA 39 284 284 ALA ALA B . n B 2 40 ASP 40 285 285 ASP ASP B . n B 2 41 VAL 41 286 286 VAL VAL B . n B 2 42 MET 42 287 287 MET MET B . n B 2 43 THR 43 288 288 THR THR B . n B 2 44 LEU 44 289 289 LEU LEU B . n B 2 45 LYS 45 290 290 LYS LYS B . n B 2 46 TRP 46 291 291 TRP TRP B . n B 2 47 THR 47 292 292 THR THR B . n B 2 48 PRO 48 293 293 PRO PRO B . n B 2 49 ASN 49 294 294 ASN ASN B . n B 2 50 GLN 50 295 295 GLN GLN B . n B 2 51 LEU 51 296 296 LEU LEU B . n B 2 52 MET 52 297 297 MET MET B . n B 2 53 ASN 53 298 298 ASN ASN B . n B 2 54 GLY 54 299 299 GLY GLY B . n B 2 55 SER 55 300 300 SER SER B . n B 2 56 VAL 56 301 301 VAL VAL B . n B 2 57 GLY 57 302 302 GLY GLY B . n B 2 58 ASP 58 303 303 ASP ASP B . n B 2 59 LEU 59 304 304 LEU LEU B . n B 2 60 ASP 60 305 305 ASP ASP B . n B 2 61 TYR 61 306 306 TYR TYR B . n B 2 62 GLU 62 307 307 GLU GLU B . n B 2 63 LYS 63 308 308 LYS LYS B . n B 2 64 SER 64 309 309 SER SER B . n B 2 65 VAL 65 310 310 VAL VAL B . n B 2 66 TYR 66 311 311 TYR TYR B . n B 2 67 TRP 67 312 312 TRP TRP B . n B 2 68 ASP 68 313 313 ASP ASP B . n B 2 69 TYR 69 314 314 TYR TYR B . n B 2 70 ALA 70 315 315 ALA ALA B . n B 2 71 VAL 71 316 316 VAL VAL B . n B 2 72 THR 72 317 317 THR THR B . n B 2 73 ILE 73 318 318 ILE ILE B . n B 2 74 ARG 74 319 319 ARG ARG B . n B 2 75 LEU 75 320 320 LEU LEU B . n B 2 76 GLU 76 321 321 GLU GLU B . n B 2 77 GLU 77 322 322 GLU GLU B . n B 2 78 ILE 78 323 323 ILE ILE B . n B 2 79 VAL 79 324 324 VAL VAL B . n B 2 80 TYR 80 325 325 TYR TYR B . n B 2 81 LEU 81 326 326 LEU LEU B . n B 2 82 HIS 82 327 327 HIS HIS B . n B 2 83 CYS 83 328 328 CYS CYS B . n B 2 84 HIS 84 329 329 HIS HIS B . n B 2 85 GLN 85 330 330 GLN GLN B . n B 2 86 GLN 86 331 331 GLN GLN B . n B 2 87 VAL 87 332 332 VAL VAL B . n B 2 88 ASP 88 333 333 ASP ASP B . n B 2 89 SER 89 334 334 SER SER B . n B 2 90 GLY 90 335 335 GLY GLY B . n B 2 91 GLY 91 336 336 GLY GLY B . n B 2 92 THR 92 337 337 THR THR B . n B 2 93 VAL 93 338 338 VAL VAL B . n B 2 94 VAL 94 339 339 VAL VAL B . n B 2 95 LEU 95 340 340 LEU LEU B . n B 2 96 VAL 96 341 341 VAL VAL B . n B 2 97 SER 97 342 342 SER SER B . n B 2 98 GLN 98 343 343 GLN GLN B . n B 2 99 ASP 99 344 344 ASP ASP B . n B 2 100 GLY 100 345 345 GLY GLY B . n B 2 101 ILE 101 346 346 ILE ILE B . n B 2 102 GLN 102 347 347 GLN GLN B . n B 2 103 ARG 103 348 348 ARG ARG B . n B 2 104 PRO 104 349 349 PRO PRO B . n B 2 105 PRO 105 350 350 PRO PRO B . n B 2 106 PHE 106 351 351 PHE PHE B . n B 2 107 ARG 107 352 352 ARG ARG B . n B 2 108 PHE 108 353 353 PHE PHE B . n B 2 109 PRO 109 354 354 PRO PRO B . n B 2 110 LYS 110 355 355 LYS LYS B . n B 2 111 GLY 111 356 356 GLY GLY B . n B 2 112 GLY 112 357 357 GLY GLY B . n B 2 113 HIS 113 358 358 HIS HIS B . n B 2 114 LEU 114 359 359 LEU LEU B . n B 2 115 LEU 115 360 360 LEU LEU B . n B 2 116 GLN 116 361 361 GLN GLN B . n B 2 117 PHE 117 362 362 PHE PHE B . n B 2 118 LEU 118 363 363 LEU LEU B . n B 2 119 SER 119 364 364 SER SER B . n B 2 120 CYS 120 365 365 CYS CYS B . n B 2 121 LEU 121 366 366 LEU LEU B . n B 2 122 GLU 122 367 367 GLU GLU B . n B 2 123 ASN 123 368 368 ASN ASN B . n B 2 124 GLY 124 369 369 GLY GLY B . n B 2 125 LEU 125 370 370 LEU LEU B . n B 2 126 LEU 126 371 371 LEU LEU B . n B 2 127 PRO 127 372 372 PRO PRO B . n B 2 128 HIS 128 373 373 HIS HIS B . n B 2 129 GLY 129 374 374 GLY GLY B . n B 2 130 GLN 130 375 375 GLN GLN B . n B 2 131 LEU 131 376 376 LEU LEU B . n B 2 132 ASP 132 377 377 ASP ASP B . n B 2 133 PRO 133 378 378 PRO PRO B . n B 2 134 PRO 134 379 379 PRO PRO B . n B 2 135 LEU 135 380 380 LEU LEU B . n B 2 136 TRP 136 381 381 TRP TRP B . n B 2 137 SER 137 382 382 SER SER B . n B 2 138 GLN 138 383 383 GLN GLN B . n B 2 139 ARG 139 384 384 ARG ARG B . n B 2 140 GLY 140 385 385 GLY GLY B . n B 2 141 LYS 141 386 386 LYS LYS B . n B 2 142 GLY 142 387 387 GLY GLY B . n B 2 143 LYS 143 388 388 LYS LYS B . n B 2 144 VAL 144 389 389 VAL VAL B . n B 2 145 PHE 145 390 ? ? ? B . n B 2 146 PRO 146 391 ? ? ? B . n B 2 147 LYS 147 392 ? ? ? B . n B 2 148 LEU 148 393 ? ? ? B . n B 2 149 ARG 149 394 ? ? ? B . n B 2 150 LYS 150 395 ? ? ? B . n B 2 151 ARG 151 396 ? ? ? B . n B 2 152 SER 152 397 ? ? ? B . n B 2 153 PRO 153 398 ? ? ? B . n B 2 154 GLN 154 399 ? ? ? B . n B 2 155 GLY 155 400 ? ? ? B . n B 2 156 SER 156 401 ? ? ? B . n B 2 157 SER 157 402 ? ? ? B . n B 2 158 GLU 158 403 ? ? ? B . n B 2 159 SER 159 404 ? ? ? B . n B 2 160 THR 160 405 ? ? ? B . n B 2 161 SER 161 406 ? ? ? B . n B 2 162 SER 162 407 ? ? ? B . n B 2 163 ASP 163 408 ? ? ? B . n B 2 164 LYS 164 409 ? ? ? B . n B 2 165 GLU 165 410 ? ? ? B . n B 2 166 ASP 166 411 ? ? ? B . n B 2 167 ASP 167 412 ? ? ? B . n B 2 168 GLU 168 413 ? ? ? B . n B 2 169 ALA 169 414 414 ALA ALA B . n B 2 170 THR 170 415 415 THR THR B . n B 2 171 ASP 171 416 416 ASP ASP B . n B 2 172 TYR 172 417 417 TYR TYR B . n B 2 173 VAL 173 418 418 VAL VAL B . n B 2 174 PHE 174 419 419 PHE PHE B . n B 2 175 ARG 175 420 420 ARG ARG B . n B 2 176 ILE 176 421 421 ILE ILE B . n B 2 177 ILE 177 422 422 ILE ILE B . n B 2 178 TYR 178 423 423 TYR TYR B . n B 2 179 PRO 179 424 424 PRO PRO B . n B 2 180 GLY 180 425 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GTP 1 301 1 GTP GTP A . D 4 MG 1 302 1 MG MG A . E 5 HOH 1 401 1 HOH HOH A . E 5 HOH 2 402 2 HOH HOH A . E 5 HOH 3 403 3 HOH HOH A . E 5 HOH 4 404 5 HOH HOH A . E 5 HOH 5 405 6 HOH HOH A . E 5 HOH 6 406 7 HOH HOH A . E 5 HOH 7 407 8 HOH HOH A . E 5 HOH 8 408 10 HOH HOH A . E 5 HOH 9 409 11 HOH HOH A . E 5 HOH 10 410 12 HOH HOH A . E 5 HOH 11 411 13 HOH HOH A . E 5 HOH 12 412 14 HOH HOH A . E 5 HOH 13 413 17 HOH HOH A . E 5 HOH 14 414 18 HOH HOH A . E 5 HOH 15 415 19 HOH HOH A . E 5 HOH 16 416 20 HOH HOH A . E 5 HOH 17 417 22 HOH HOH A . E 5 HOH 18 418 23 HOH HOH A . E 5 HOH 19 419 26 HOH HOH A . E 5 HOH 20 420 27 HOH HOH A . E 5 HOH 21 421 28 HOH HOH A . E 5 HOH 22 422 29 HOH HOH A . E 5 HOH 23 423 30 HOH HOH A . E 5 HOH 24 424 31 HOH HOH A . E 5 HOH 25 425 33 HOH HOH A . E 5 HOH 26 426 34 HOH HOH A . E 5 HOH 27 427 36 HOH HOH A . E 5 HOH 28 428 37 HOH HOH A . E 5 HOH 29 429 38 HOH HOH A . E 5 HOH 30 430 40 HOH HOH A . E 5 HOH 31 431 41 HOH HOH A . E 5 HOH 32 432 42 HOH HOH A . E 5 HOH 33 433 44 HOH HOH A . E 5 HOH 34 434 46 HOH HOH A . E 5 HOH 35 435 47 HOH HOH A . E 5 HOH 36 436 48 HOH HOH A . E 5 HOH 37 437 49 HOH HOH A . E 5 HOH 38 438 50 HOH HOH A . E 5 HOH 39 439 51 HOH HOH A . E 5 HOH 40 440 52 HOH HOH A . E 5 HOH 41 441 54 HOH HOH A . E 5 HOH 42 442 55 HOH HOH A . E 5 HOH 43 443 57 HOH HOH A . E 5 HOH 44 444 58 HOH HOH A . E 5 HOH 45 445 59 HOH HOH A . E 5 HOH 46 446 61 HOH HOH A . E 5 HOH 47 447 62 HOH HOH A . E 5 HOH 48 448 63 HOH HOH A . E 5 HOH 49 449 64 HOH HOH A . E 5 HOH 50 450 65 HOH HOH A . E 5 HOH 51 451 66 HOH HOH A . E 5 HOH 52 452 67 HOH HOH A . E 5 HOH 53 453 68 HOH HOH A . E 5 HOH 54 454 69 HOH HOH A . E 5 HOH 55 455 71 HOH HOH A . E 5 HOH 56 456 74 HOH HOH A . E 5 HOH 57 457 75 HOH HOH A . E 5 HOH 58 458 78 HOH HOH A . E 5 HOH 59 459 79 HOH HOH A . E 5 HOH 60 460 80 HOH HOH A . E 5 HOH 61 461 82 HOH HOH A . E 5 HOH 62 462 83 HOH HOH A . E 5 HOH 63 463 84 HOH HOH A . E 5 HOH 64 464 86 HOH HOH A . E 5 HOH 65 465 87 HOH HOH A . E 5 HOH 66 466 88 HOH HOH A . E 5 HOH 67 467 89 HOH HOH A . E 5 HOH 68 468 91 HOH HOH A . E 5 HOH 69 469 92 HOH HOH A . E 5 HOH 70 470 94 HOH HOH A . E 5 HOH 71 471 96 HOH HOH A . E 5 HOH 72 472 97 HOH HOH A . E 5 HOH 73 473 98 HOH HOH A . E 5 HOH 74 474 104 HOH HOH A . F 5 HOH 1 501 4 HOH HOH B . F 5 HOH 2 502 9 HOH HOH B . F 5 HOH 3 503 15 HOH HOH B . F 5 HOH 4 504 16 HOH HOH B . F 5 HOH 5 505 21 HOH HOH B . F 5 HOH 6 506 24 HOH HOH B . F 5 HOH 7 507 25 HOH HOH B . F 5 HOH 8 508 32 HOH HOH B . F 5 HOH 9 509 35 HOH HOH B . F 5 HOH 10 510 39 HOH HOH B . F 5 HOH 11 511 43 HOH HOH B . F 5 HOH 12 512 45 HOH HOH B . F 5 HOH 13 513 53 HOH HOH B . F 5 HOH 14 514 56 HOH HOH B . F 5 HOH 15 515 60 HOH HOH B . F 5 HOH 16 516 70 HOH HOH B . F 5 HOH 17 517 72 HOH HOH B . F 5 HOH 18 518 73 HOH HOH B . F 5 HOH 19 519 76 HOH HOH B . F 5 HOH 20 520 77 HOH HOH B . F 5 HOH 21 521 81 HOH HOH B . F 5 HOH 22 522 85 HOH HOH B . F 5 HOH 23 523 90 HOH HOH B . F 5 HOH 24 524 93 HOH HOH B . F 5 HOH 25 525 95 HOH HOH B . F 5 HOH 26 526 99 HOH HOH B . F 5 HOH 27 527 100 HOH HOH B . F 5 HOH 28 528 101 HOH HOH B . F 5 HOH 29 529 102 HOH HOH B . F 5 HOH 30 530 103 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2070 ? 1 MORE -20 ? 1 'SSA (A^2)' 16500 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 22 ? A SER 21 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 OG1 ? A THR 40 ? A THR 39 ? 1_555 81.4 ? 2 OG ? A SER 22 ? A SER 21 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O2B ? C GTP . ? A GTP 301 ? 1_555 93.5 ? 3 OG1 ? A THR 40 ? A THR 39 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O2B ? C GTP . ? A GTP 301 ? 1_555 171.8 ? 4 OG ? A SER 22 ? A SER 21 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O1G ? C GTP . ? A GTP 301 ? 1_555 167.6 ? 5 OG1 ? A THR 40 ? A THR 39 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O1G ? C GTP . ? A GTP 301 ? 1_555 89.2 ? 6 O2B ? C GTP . ? A GTP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O1G ? C GTP . ? A GTP 301 ? 1_555 94.8 ? 7 OG ? A SER 22 ? A SER 21 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 446 ? 1_555 86.9 ? 8 OG1 ? A THR 40 ? A THR 39 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 446 ? 1_555 92.2 ? 9 O2B ? C GTP . ? A GTP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 446 ? 1_555 94.0 ? 10 O1G ? C GTP . ? A GTP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 446 ? 1_555 101.7 ? 11 OG ? A SER 22 ? A SER 21 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 447 ? 1_555 88.7 ? 12 OG1 ? A THR 40 ? A THR 39 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 447 ? 1_555 90.3 ? 13 O2B ? C GTP . ? A GTP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 447 ? 1_555 83.1 ? 14 O1G ? C GTP . ? A GTP 301 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 447 ? 1_555 83.2 ? 15 O ? E HOH . ? A HOH 446 ? 1_555 MG ? D MG . ? A MG 302 ? 1_555 O ? E HOH . ? A HOH 447 ? 1_555 174.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-10 2 'Structure model' 1 1 2014-09-24 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2019-12-25 5 'Structure model' 1 4 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' pdbx_struct_conn_angle 9 5 'Structure model' struct_conn 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_citation.journal_volume' 11 4 'Structure model' '_citation.page_first' 12 4 'Structure model' '_citation.page_last' 13 4 'Structure model' '_citation.pdbx_database_id_PubMed' 14 4 'Structure model' '_citation.title' 15 4 'Structure model' '_struct_ref_seq_dif.details' 16 5 'Structure model' '_database_2.pdbx_DOI' 17 5 'Structure model' '_database_2.pdbx_database_accession' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 28 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 29 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 30 5 'Structure model' '_pdbx_struct_conn_angle.value' 31 5 'Structure model' '_struct_conn.pdbx_dist_value' 32 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 43 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 44 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 45 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.300 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 18655 _diffrn_reflns.pdbx_Rmerge_I_obs 0.079 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.13 _diffrn_reflns.pdbx_redundancy 5.70 _diffrn_reflns.pdbx_rejects ? _diffrn_reflns.pdbx_percent_possible_obs 98.70 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.number 107241 _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.95 50.00 ? ? 0.044 ? 0.984 5.20 ? 1 3.93 4.95 ? ? 0.071 ? 1.478 5.30 ? 1 3.44 3.93 ? ? 0.079 ? 1.339 5.60 ? 1 3.12 3.44 ? ? 0.069 ? 1.013 5.90 ? 1 2.90 3.12 ? ? 0.087 ? 1.378 5.90 ? 1 2.73 2.90 ? ? 0.120 ? 1.135 5.90 ? 1 2.59 2.73 ? ? 0.157 ? 1.108 5.90 ? 1 2.48 2.59 ? ? 0.212 ? 1.003 5.90 ? 1 2.38 2.48 ? ? 0.289 ? 0.936 6.00 ? 1 2.30 2.38 ? ? 0.354 ? 0.946 6.00 ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -1.8756 _pdbx_refine_tls.origin_y 19.6840 _pdbx_refine_tls.origin_z -13.6395 _pdbx_refine_tls.T[1][1] 0.1879 _pdbx_refine_tls.T[2][2] 0.2277 _pdbx_refine_tls.T[3][3] 0.2367 _pdbx_refine_tls.T[1][2] -0.0030 _pdbx_refine_tls.T[1][3] -0.0008 _pdbx_refine_tls.T[2][3] 0.0350 _pdbx_refine_tls.L[1][1] 1.3961 _pdbx_refine_tls.L[2][2] 2.7585 _pdbx_refine_tls.L[3][3] 4.0279 _pdbx_refine_tls.L[1][2] -0.2648 _pdbx_refine_tls.L[1][3] -0.2249 _pdbx_refine_tls.L[2][3] 0.6187 _pdbx_refine_tls.S[1][1] -0.0215 _pdbx_refine_tls.S[2][2] -0.0343 _pdbx_refine_tls.S[3][3] 0.0473 _pdbx_refine_tls.S[1][2] 0.0931 _pdbx_refine_tls.S[1][3] 0.0312 _pdbx_refine_tls.S[2][3] -0.0960 _pdbx_refine_tls.S[2][1] -0.2117 _pdbx_refine_tls.S[3][1] -0.1639 _pdbx_refine_tls.S[3][2] -0.0521 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 6 A 177 all ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 254 B 424 all ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 A 1 A 301 all ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 A 1 A 302 all ? ? ? ? ? 'X-RAY DIFFRACTION' 5 1 A 1 A 474 all ? ? ? ? ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.7.2_869 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 40 ? ? -102.35 -72.67 2 1 ASP A 110 ? ? 46.74 71.97 3 1 SER A 158 ? ? 86.89 -10.85 4 1 GLU A 176 ? ? -65.86 8.49 5 1 ALA B 284 ? ? -122.04 -88.60 6 1 SER B 300 ? ? -98.67 40.16 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A ALA 2 ? A ALA 3 4 1 Y 1 A GLY 3 ? A GLY 4 5 1 Y 1 A LYS 4 ? A LYS 5 6 1 Y 1 A SER 5 ? A SER 6 7 1 Y 1 A ARG 178 ? A ARG 179 8 1 Y 1 A SER 179 ? A SER 180 9 1 Y 1 A GLU 180 ? A GLU 181 10 1 Y 1 A HIS 181 ? A HIS 182 11 1 Y 1 A LEU 182 ? A LEU 183 12 1 Y 1 A ILE 183 ? A ILE 184 13 1 Y 1 A GLN 184 ? A GLN 185 14 1 Y 1 A THR 185 ? A THR 186 15 1 Y 1 A ASP 186 ? A ASP 187 16 1 Y 1 A THR 187 ? A THR 188 17 1 Y 1 A VAL 188 ? A VAL 189 18 1 Y 1 A ASN 189 ? A ASN 190 19 1 Y 1 A LEU 190 ? A LEU 191 20 1 Y 1 A HIS 191 ? A HIS 192 21 1 Y 1 A ARG 192 ? A ARG 193 22 1 Y 1 A LYS 193 ? A LYS 194 23 1 Y 1 A PRO 194 ? A PRO 195 24 1 Y 1 A LYS 195 ? A LYS 196 25 1 Y 1 A PRO 196 ? A PRO 197 26 1 Y 1 A ASN 197 ? A ASN 198 27 1 Y 1 A SER 198 ? A SER 199 28 1 Y 1 A SER 199 ? A SER 200 29 1 Y 1 A LEU 200 ? A LEU 201 30 1 Y 1 A GLU 201 ? A GLU 202 31 1 Y 1 A HIS 202 ? A HIS 203 32 1 Y 1 A HIS 203 ? A HIS 204 33 1 Y 1 A HIS 204 ? A HIS 205 34 1 Y 1 A HIS 205 ? A HIS 206 35 1 Y 1 A HIS 206 ? A HIS 207 36 1 Y 1 A HIS 207 ? A HIS 208 37 1 Y 1 B MET 246 ? B MET 1 38 1 Y 1 B ALA 247 ? B ALA 2 39 1 Y 1 B HIS 248 ? B HIS 3 40 1 Y 1 B HIS 249 ? B HIS 4 41 1 Y 1 B HIS 250 ? B HIS 5 42 1 Y 1 B HIS 251 ? B HIS 6 43 1 Y 1 B HIS 252 ? B HIS 7 44 1 Y 1 B HIS 253 ? B HIS 8 45 1 Y 1 B PHE 390 ? B PHE 145 46 1 Y 1 B PRO 391 ? B PRO 146 47 1 Y 1 B LYS 392 ? B LYS 147 48 1 Y 1 B LEU 393 ? B LEU 148 49 1 Y 1 B ARG 394 ? B ARG 149 50 1 Y 1 B LYS 395 ? B LYS 150 51 1 Y 1 B ARG 396 ? B ARG 151 52 1 Y 1 B SER 397 ? B SER 152 53 1 Y 1 B PRO 398 ? B PRO 153 54 1 Y 1 B GLN 399 ? B GLN 154 55 1 Y 1 B GLY 400 ? B GLY 155 56 1 Y 1 B SER 401 ? B SER 156 57 1 Y 1 B SER 402 ? B SER 157 58 1 Y 1 B GLU 403 ? B GLU 158 59 1 Y 1 B SER 404 ? B SER 159 60 1 Y 1 B THR 405 ? B THR 160 61 1 Y 1 B SER 406 ? B SER 161 62 1 Y 1 B SER 407 ? B SER 162 63 1 Y 1 B ASP 408 ? B ASP 163 64 1 Y 1 B LYS 409 ? B LYS 164 65 1 Y 1 B GLU 410 ? B GLU 165 66 1 Y 1 B ASP 411 ? B ASP 166 67 1 Y 1 B ASP 412 ? B ASP 167 68 1 Y 1 B GLU 413 ? B GLU 168 69 1 Y 1 B GLY 425 ? B GLY 180 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GTP PG P N N 137 GTP O1G O N N 138 GTP O2G O N N 139 GTP O3G O N N 140 GTP O3B O N N 141 GTP PB P N N 142 GTP O1B O N N 143 GTP O2B O N N 144 GTP O3A O N N 145 GTP PA P N N 146 GTP O1A O N N 147 GTP O2A O N N 148 GTP "O5'" O N N 149 GTP "C5'" C N N 150 GTP "C4'" C N R 151 GTP "O4'" O N N 152 GTP "C3'" C N S 153 GTP "O3'" O N N 154 GTP "C2'" C N R 155 GTP "O2'" O N N 156 GTP "C1'" C N R 157 GTP N9 N Y N 158 GTP C8 C Y N 159 GTP N7 N Y N 160 GTP C5 C Y N 161 GTP C6 C N N 162 GTP O6 O N N 163 GTP N1 N N N 164 GTP C2 C N N 165 GTP N2 N N N 166 GTP N3 N N N 167 GTP C4 C Y N 168 GTP HOG2 H N N 169 GTP HOG3 H N N 170 GTP HOB2 H N N 171 GTP HOA2 H N N 172 GTP "H5'" H N N 173 GTP "H5''" H N N 174 GTP "H4'" H N N 175 GTP "H3'" H N N 176 GTP "HO3'" H N N 177 GTP "H2'" H N N 178 GTP "HO2'" H N N 179 GTP "H1'" H N N 180 GTP H8 H N N 181 GTP HN1 H N N 182 GTP HN21 H N N 183 GTP HN22 H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 MG MG MG N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GTP PG O1G doub N N 129 GTP PG O2G sing N N 130 GTP PG O3G sing N N 131 GTP PG O3B sing N N 132 GTP O2G HOG2 sing N N 133 GTP O3G HOG3 sing N N 134 GTP O3B PB sing N N 135 GTP PB O1B doub N N 136 GTP PB O2B sing N N 137 GTP PB O3A sing N N 138 GTP O2B HOB2 sing N N 139 GTP O3A PA sing N N 140 GTP PA O1A doub N N 141 GTP PA O2A sing N N 142 GTP PA "O5'" sing N N 143 GTP O2A HOA2 sing N N 144 GTP "O5'" "C5'" sing N N 145 GTP "C5'" "C4'" sing N N 146 GTP "C5'" "H5'" sing N N 147 GTP "C5'" "H5''" sing N N 148 GTP "C4'" "O4'" sing N N 149 GTP "C4'" "C3'" sing N N 150 GTP "C4'" "H4'" sing N N 151 GTP "O4'" "C1'" sing N N 152 GTP "C3'" "O3'" sing N N 153 GTP "C3'" "C2'" sing N N 154 GTP "C3'" "H3'" sing N N 155 GTP "O3'" "HO3'" sing N N 156 GTP "C2'" "O2'" sing N N 157 GTP "C2'" "C1'" sing N N 158 GTP "C2'" "H2'" sing N N 159 GTP "O2'" "HO2'" sing N N 160 GTP "C1'" N9 sing N N 161 GTP "C1'" "H1'" sing N N 162 GTP N9 C8 sing Y N 163 GTP N9 C4 sing Y N 164 GTP C8 N7 doub Y N 165 GTP C8 H8 sing N N 166 GTP N7 C5 sing Y N 167 GTP C5 C6 sing N N 168 GTP C5 C4 doub Y N 169 GTP C6 O6 doub N N 170 GTP C6 N1 sing N N 171 GTP N1 C2 sing N N 172 GTP N1 HN1 sing N N 173 GTP C2 N2 sing N N 174 GTP C2 N3 doub N N 175 GTP N2 HN21 sing N N 176 GTP N2 HN22 sing N N 177 GTP N3 C4 sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "GUANOSINE-5'-TRIPHOSPHATE" GTP 4 'MAGNESIUM ION' MG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YZL _pdbx_initial_refinement_model.details ? #