HEADER HYDROLASE/VIRAL PROTEIN 29-JUL-14 4QZV TITLE BAT-DERIVED CORONAVIRUS HKU4 USES MERS-COV RECEPTOR HUMAN CD26 FOR TITLE 2 CELL ENTRY COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIPEPTIDYL PEPTIDASE 4; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: ADABP, ADENOSINE DEAMINASE COMPLEXING PROTEIN 2, ADCP-2, COMPND 5 DIPEPTIDYL PEPTIDASE IV, DPP IV, T-CELL ACTIVATION ANTIGEN CD26, COMPND 6 TP103, DIPEPTIDYL PEPTIDASE 4 MEMBRANE FORM, DIPEPTIDYL PEPTIDASE IV COMPND 7 MEMBRANE FORM, DIPEPTIDYL PEPTIDASE 4 SOLUBLE FORM, DIPEPTIDYL COMPND 8 PEPTIDASE IV SOLUBLE FORM; COMPND 9 EC: 3.4.14.5; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: SPIKE PROTEIN S1; COMPND 13 CHAIN: B, D; COMPND 14 FRAGMENT: RECEPTOR BINDING DOMAIN (UNP RESIDUES 372-611); COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DPP4, ADCP2, CD26; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: TYLONYCTERIS BAT CORONAVIRUS HKU4; SOURCE 12 ORGANISM_COMMON: BTCOV; SOURCE 13 ORGANISM_TAXID: 694007; SOURCE 14 GENE: S, 2; SOURCE 15 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 16 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS 8-BLADED BETA-PROPELLER DOMAIN, ALPHA/BETA HYDROLASE DOMAIN, BLADES KEYWDS 2 IV AND V, CD26 BETA-PROPELLER, HYDROLASE-VIRAL PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR F.G.GAO,Q.H.WANG,J.X.QI,G.W.LU REVDAT 2 29-JUL-20 4QZV 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 29-OCT-14 4QZV 0 JRNL AUTH Q.H.WANG,J.X.QI,Y.YUAN,Y.XUAN,P.HAN,Y.WAN,W.JI,Y.LI,Y.WU, JRNL AUTH 2 J.WANG,A.IWAMOTO,P.C.WOO,K.Y.YUEN,J.YAN,G.W.LU,G.F.GAO JRNL TITL BAT ORIGINS OF MERS-COV SUPPORTED BY BAT CORONAVIRUS HKU4 JRNL TITL 2 USAGE OF HUMAN RECEPTOR CD26. JRNL REF CELL HOST MICROBE V. 16 328 2014 JRNL REFN ISSN 1931-3128 JRNL PMID 25211075 JRNL DOI 10.1016/J.CHOM.2014.08.009 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 102311 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3082 - 8.0394 0.99 3546 173 0.1938 0.2271 REMARK 3 2 8.0394 - 6.3864 1.00 3408 183 0.1894 0.2061 REMARK 3 3 6.3864 - 5.5807 1.00 3340 188 0.1731 0.1748 REMARK 3 4 5.5807 - 5.0711 1.00 3349 201 0.1482 0.1926 REMARK 3 5 5.0711 - 4.7080 1.00 3327 189 0.1366 0.1729 REMARK 3 6 4.7080 - 4.4307 1.00 3306 177 0.1332 0.1509 REMARK 3 7 4.4307 - 4.2090 1.00 3297 186 0.1390 0.1804 REMARK 3 8 4.2090 - 4.0258 1.00 3313 183 0.1515 0.1913 REMARK 3 9 4.0258 - 3.8709 1.00 3307 184 0.1621 0.1988 REMARK 3 10 3.8709 - 3.7374 1.00 3281 166 0.1769 0.2002 REMARK 3 11 3.7374 - 3.6206 1.00 3286 155 0.1782 0.2128 REMARK 3 12 3.6206 - 3.5172 0.99 3280 168 0.1912 0.2254 REMARK 3 13 3.5172 - 3.4246 0.99 3219 167 0.2006 0.2375 REMARK 3 14 3.4246 - 3.3411 0.99 3296 164 0.2107 0.2657 REMARK 3 15 3.3411 - 3.2651 0.99 3253 166 0.2247 0.2832 REMARK 3 16 3.2651 - 3.1957 0.99 3267 173 0.2182 0.2454 REMARK 3 17 3.1957 - 3.1318 0.99 3212 190 0.2210 0.2333 REMARK 3 18 3.1318 - 3.0727 0.99 3250 189 0.2161 0.2484 REMARK 3 19 3.0727 - 3.0178 0.98 3189 185 0.2262 0.2835 REMARK 3 20 3.0178 - 2.9667 0.97 3185 160 0.2368 0.2972 REMARK 3 21 2.9667 - 2.9188 0.99 3182 174 0.2373 0.2722 REMARK 3 22 2.9188 - 2.8739 0.97 3242 148 0.2286 0.2693 REMARK 3 23 2.8739 - 2.8317 0.98 3198 153 0.2383 0.2688 REMARK 3 24 2.8317 - 2.7918 0.97 3179 153 0.2462 0.2982 REMARK 3 25 2.7918 - 2.7540 0.96 3162 155 0.2440 0.2883 REMARK 3 26 2.7540 - 2.7183 0.97 3116 178 0.2472 0.2579 REMARK 3 27 2.7183 - 2.6843 0.95 3169 151 0.2483 0.2760 REMARK 3 28 2.6843 - 2.6520 0.96 3143 150 0.2505 0.3382 REMARK 3 29 2.6520 - 2.6211 0.96 3076 170 0.2596 0.3351 REMARK 3 30 2.6211 - 2.5917 0.85 2821 133 0.2808 0.3180 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 15885 REMARK 3 ANGLE : 0.944 21612 REMARK 3 CHIRALITY : 0.040 2365 REMARK 3 PLANARITY : 0.004 2734 REMARK 3 DIHEDRAL : 14.264 5664 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 180.8006 251.3016 41.2624 REMARK 3 T TENSOR REMARK 3 T11: 0.1984 T22: 0.2280 REMARK 3 T33: 0.1936 T12: -0.0018 REMARK 3 T13: 0.0173 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.1699 L22: 0.1628 REMARK 3 L33: 0.1481 L12: -0.0349 REMARK 3 L13: 0.0989 L23: -0.0233 REMARK 3 S TENSOR REMARK 3 S11: -0.0121 S12: 0.0135 S13: 0.0083 REMARK 3 S21: -0.0238 S22: 0.0288 S23: -0.0263 REMARK 3 S31: -0.0031 S32: 0.0075 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QZV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086722. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102311 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.592 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE, PH 5.5, 15% PEG REMARK 280 6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 101.58300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 103.87650 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 101.58300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 103.87650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 39 REMARK 465 HIS A 767 REMARK 465 HIS A 768 REMARK 465 HIS A 769 REMARK 465 HIS A 770 REMARK 465 HIS A 771 REMARK 465 HIS A 772 REMARK 465 GLU B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 THR B 5 REMARK 465 GLY B 6 REMARK 465 THR B 7 REMARK 465 PHE B 8 REMARK 465 ILE B 9 REMARK 465 GLU B 10 REMARK 465 GLN B 11 REMARK 465 PRO B 12 REMARK 465 ASN B 13 REMARK 465 ALA B 14 REMARK 465 ASP B 223 REMARK 465 LEU B 224 REMARK 465 GLY B 225 REMARK 465 ASP B 226 REMARK 465 SER B 227 REMARK 465 LEU B 228 REMARK 465 THR B 229 REMARK 465 ILE B 230 REMARK 465 THR B 231 REMARK 465 ASN B 232 REMARK 465 ARG B 233 REMARK 465 LEU B 234 REMARK 465 GLY B 235 REMARK 465 LYS B 236 REMARK 465 CYS B 237 REMARK 465 VAL B 238 REMARK 465 ASP B 239 REMARK 465 TYR B 240 REMARK 465 HIS B 241 REMARK 465 HIS B 242 REMARK 465 HIS B 243 REMARK 465 HIS B 244 REMARK 465 HIS B 245 REMARK 465 HIS B 246 REMARK 465 SER C 39 REMARK 465 HIS C 767 REMARK 465 HIS C 768 REMARK 465 HIS C 769 REMARK 465 HIS C 770 REMARK 465 HIS C 771 REMARK 465 HIS C 772 REMARK 465 GLU D 1 REMARK 465 ALA D 2 REMARK 465 SER D 3 REMARK 465 ALA D 4 REMARK 465 THR D 5 REMARK 465 GLY D 6 REMARK 465 THR D 7 REMARK 465 PHE D 8 REMARK 465 ILE D 9 REMARK 465 GLU D 10 REMARK 465 GLN D 11 REMARK 465 PRO D 12 REMARK 465 ASN D 13 REMARK 465 ALA D 14 REMARK 465 ASP D 223 REMARK 465 LEU D 224 REMARK 465 GLY D 225 REMARK 465 ASP D 226 REMARK 465 SER D 227 REMARK 465 LEU D 228 REMARK 465 THR D 229 REMARK 465 ILE D 230 REMARK 465 THR D 231 REMARK 465 ASN D 232 REMARK 465 ARG D 233 REMARK 465 LEU D 234 REMARK 465 GLY D 235 REMARK 465 LYS D 236 REMARK 465 CYS D 237 REMARK 465 VAL D 238 REMARK 465 ASP D 239 REMARK 465 TYR D 240 REMARK 465 HIS D 241 REMARK 465 HIS D 242 REMARK 465 HIS D 243 REMARK 465 HIS D 244 REMARK 465 HIS D 245 REMARK 465 HIS D 246 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS D 59 SG CYS D 112 1.69 REMARK 500 O HOH A 949 O HOH A 996 1.85 REMARK 500 NH1 ARG A 658 O HOH A 1029 1.88 REMARK 500 O HOH C 994 O HOH C 1094 1.93 REMARK 500 O HOH A 1062 O HOH C 1061 1.95 REMARK 500 OG SER D 63 OG SER D 66 1.96 REMARK 500 O HOH A 992 O HOH A 1057 1.96 REMARK 500 OG1 THR B 148 O HOH B 317 1.98 REMARK 500 O HOH C 1003 O HOH C 1048 2.00 REMARK 500 O HOH C 1035 O HOH C 1085 2.00 REMARK 500 O TYR D 157 O HOH D 307 2.04 REMARK 500 O HOH C 1076 O HOH C 1138 2.05 REMARK 500 O4 NAG G 2 O HOH A 935 2.07 REMARK 500 O PRO A 766 O HOH A 1040 2.07 REMARK 500 O LEU D 150 O HOH D 310 2.07 REMARK 500 O LYS A 122 O HOH A 993 2.08 REMARK 500 O VAL C 233 O HOH C 1015 2.08 REMARK 500 OD1 ASP C 302 O HOH C 931 2.10 REMARK 500 O HOH A 992 O HOH A 997 2.10 REMARK 500 OE1 GLU C 82 OH TYR C 467 2.11 REMARK 500 NH2 ARG D 138 O GLU D 183 2.11 REMARK 500 O HOH C 974 O HOH C 1126 2.12 REMARK 500 O HOH A 973 O HOH A 1087 2.13 REMARK 500 O HOH C 937 O HOH C 1079 2.13 REMARK 500 O4 NAG J 2 O5 BMA J 3 2.14 REMARK 500 O TRP A 734 O HOH A 914 2.14 REMARK 500 O ALA C 555 O HOH C 983 2.16 REMARK 500 OD2 ASP C 729 O HOH C 977 2.16 REMARK 500 O HOH B 304 O HOH B 318 2.16 REMARK 500 O HOH A 943 O HOH A 1035 2.17 REMARK 500 OE1 GLU C 67 O HOH C 964 2.18 REMARK 500 O PRO C 766 O HOH C 1064 2.18 REMARK 500 NH2 ARG C 40 O ASN C 506 2.19 REMARK 500 O PRO C 532 O HOH C 1114 2.19 REMARK 500 O LEU A 640 O HOH A 1048 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 73 52.15 39.35 REMARK 500 ASN A 74 -3.24 69.92 REMARK 500 ASP A 96 30.04 -98.22 REMARK 500 GLN A 123 -100.36 -106.26 REMARK 500 TRP A 124 -148.60 -94.15 REMARK 500 HIS A 162 35.27 -154.24 REMARK 500 ASP A 192 -0.15 63.88 REMARK 500 SER A 242 -162.12 61.33 REMARK 500 GLN A 320 33.87 -82.74 REMARK 500 THR A 401 59.55 -92.33 REMARK 500 LYS A 423 16.71 52.64 REMARK 500 ASN A 450 70.06 -169.04 REMARK 500 ASN A 487 22.69 -140.85 REMARK 500 TYR A 547 -73.13 -124.55 REMARK 500 ARG A 597 54.72 -149.79 REMARK 500 THR A 600 -93.73 -124.70 REMARK 500 SER A 630 -120.13 58.52 REMARK 500 ASP A 678 -96.82 -108.41 REMARK 500 ASN A 710 -73.05 -92.68 REMARK 500 MET A 733 119.58 -160.40 REMARK 500 ASP A 739 -158.41 -99.24 REMARK 500 ASN B 40 71.50 44.35 REMARK 500 TYR B 82 124.17 -172.72 REMARK 500 ASP B 145 9.86 -154.26 REMARK 500 SER B 164 73.46 -164.10 REMARK 500 GLU B 183 2.22 -62.27 REMARK 500 ASP B 216 128.35 163.61 REMARK 500 SER C 64 -156.71 -143.77 REMARK 500 HIS C 66 13.92 -152.60 REMARK 500 GLU C 73 -62.19 -173.29 REMARK 500 GLU C 97 -19.49 -170.45 REMARK 500 HIS C 100 -165.56 -105.78 REMARK 500 GLN C 123 -98.63 -112.50 REMARK 500 TRP C 124 -151.04 -93.44 REMARK 500 TRP C 154 136.63 -170.47 REMARK 500 HIS C 162 30.04 -153.45 REMARK 500 ILE C 193 -65.21 -121.00 REMARK 500 VAL C 207 -62.74 -107.34 REMARK 500 SER C 242 -163.18 57.68 REMARK 500 THR C 307 -165.36 -128.88 REMARK 500 GLN C 320 36.03 -86.24 REMARK 500 ASN C 450 74.63 -173.80 REMARK 500 ASN C 520 82.39 16.58 REMARK 500 TYR C 547 -68.14 -124.56 REMARK 500 ARG C 597 58.41 -146.99 REMARK 500 THR C 600 -85.64 -130.07 REMARK 500 LYS C 615 39.54 -99.18 REMARK 500 SER C 630 -125.99 60.07 REMARK 500 ASP C 678 -90.71 -105.61 REMARK 500 ASN C 679 31.09 -141.45 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 121 VAL B 122 148.10 REMARK 500 ASP C 96 GLU C 97 -141.29 REMARK 500 ASN D 121 VAL D 122 133.44 REMARK 500 THR D 215 ASP D 216 149.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KR0 RELATED DB: PDB REMARK 900 COMPLEX STRUCTURE OF MERS-COV SPIKE RBD BOUND TO HUMAN CD26 DBREF 4QZV A 39 766 UNP P27487 DPP4_HUMAN 39 766 DBREF 4QZV B 1 240 UNP A3EX94 SPIKE_BCHK4 372 611 DBREF 4QZV C 39 766 UNP P27487 DPP4_HUMAN 39 766 DBREF 4QZV D 1 240 UNP A3EX94 SPIKE_BCHK4 372 611 SEQADV 4QZV HIS A 767 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS A 768 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS A 769 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS A 770 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS A 771 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS A 772 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS B 241 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS B 242 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS B 243 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS B 244 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS B 245 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS B 246 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS C 767 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS C 768 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS C 769 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS C 770 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS C 771 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS C 772 UNP P27487 EXPRESSION TAG SEQADV 4QZV HIS D 241 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS D 242 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS D 243 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS D 244 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS D 245 UNP A3EX94 EXPRESSION TAG SEQADV 4QZV HIS D 246 UNP A3EX94 EXPRESSION TAG SEQRES 1 A 734 SER ARG LYS THR TYR THR LEU THR ASP TYR LEU LYS ASN SEQRES 2 A 734 THR TYR ARG LEU LYS LEU TYR SER LEU ARG TRP ILE SER SEQRES 3 A 734 ASP HIS GLU TYR LEU TYR LYS GLN GLU ASN ASN ILE LEU SEQRES 4 A 734 VAL PHE ASN ALA GLU TYR GLY ASN SER SER VAL PHE LEU SEQRES 5 A 734 GLU ASN SER THR PHE ASP GLU PHE GLY HIS SER ILE ASN SEQRES 6 A 734 ASP TYR SER ILE SER PRO ASP GLY GLN PHE ILE LEU LEU SEQRES 7 A 734 GLU TYR ASN TYR VAL LYS GLN TRP ARG HIS SER TYR THR SEQRES 8 A 734 ALA SER TYR ASP ILE TYR ASP LEU ASN LYS ARG GLN LEU SEQRES 9 A 734 ILE THR GLU GLU ARG ILE PRO ASN ASN THR GLN TRP VAL SEQRES 10 A 734 THR TRP SER PRO VAL GLY HIS LYS LEU ALA TYR VAL TRP SEQRES 11 A 734 ASN ASN ASP ILE TYR VAL LYS ILE GLU PRO ASN LEU PRO SEQRES 12 A 734 SER TYR ARG ILE THR TRP THR GLY LYS GLU ASP ILE ILE SEQRES 13 A 734 TYR ASN GLY ILE THR ASP TRP VAL TYR GLU GLU GLU VAL SEQRES 14 A 734 PHE SER ALA TYR SER ALA LEU TRP TRP SER PRO ASN GLY SEQRES 15 A 734 THR PHE LEU ALA TYR ALA GLN PHE ASN ASP THR GLU VAL SEQRES 16 A 734 PRO LEU ILE GLU TYR SER PHE TYR SER ASP GLU SER LEU SEQRES 17 A 734 GLN TYR PRO LYS THR VAL ARG VAL PRO TYR PRO LYS ALA SEQRES 18 A 734 GLY ALA VAL ASN PRO THR VAL LYS PHE PHE VAL VAL ASN SEQRES 19 A 734 THR ASP SER LEU SER SER VAL THR ASN ALA THR SER ILE SEQRES 20 A 734 GLN ILE THR ALA PRO ALA SER MET LEU ILE GLY ASP HIS SEQRES 21 A 734 TYR LEU CYS ASP VAL THR TRP ALA THR GLN GLU ARG ILE SEQRES 22 A 734 SER LEU GLN TRP LEU ARG ARG ILE GLN ASN TYR SER VAL SEQRES 23 A 734 MET ASP ILE CYS ASP TYR ASP GLU SER SER GLY ARG TRP SEQRES 24 A 734 ASN CYS LEU VAL ALA ARG GLN HIS ILE GLU MET SER THR SEQRES 25 A 734 THR GLY TRP VAL GLY ARG PHE ARG PRO SER GLU PRO HIS SEQRES 26 A 734 PHE THR LEU ASP GLY ASN SER PHE TYR LYS ILE ILE SER SEQRES 27 A 734 ASN GLU GLU GLY TYR ARG HIS ILE CYS TYR PHE GLN ILE SEQRES 28 A 734 ASP LYS LYS ASP CYS THR PHE ILE THR LYS GLY THR TRP SEQRES 29 A 734 GLU VAL ILE GLY ILE GLU ALA LEU THR SER ASP TYR LEU SEQRES 30 A 734 TYR TYR ILE SER ASN GLU TYR LYS GLY MET PRO GLY GLY SEQRES 31 A 734 ARG ASN LEU TYR LYS ILE GLN LEU SER ASP TYR THR LYS SEQRES 32 A 734 VAL THR CYS LEU SER CYS GLU LEU ASN PRO GLU ARG CYS SEQRES 33 A 734 GLN TYR TYR SER VAL SER PHE SER LYS GLU ALA LYS TYR SEQRES 34 A 734 TYR GLN LEU ARG CYS SER GLY PRO GLY LEU PRO LEU TYR SEQRES 35 A 734 THR LEU HIS SER SER VAL ASN ASP LYS GLY LEU ARG VAL SEQRES 36 A 734 LEU GLU ASP ASN SER ALA LEU ASP LYS MET LEU GLN ASN SEQRES 37 A 734 VAL GLN MET PRO SER LYS LYS LEU ASP PHE ILE ILE LEU SEQRES 38 A 734 ASN GLU THR LYS PHE TRP TYR GLN MET ILE LEU PRO PRO SEQRES 39 A 734 HIS PHE ASP LYS SER LYS LYS TYR PRO LEU LEU LEU ASP SEQRES 40 A 734 VAL TYR ALA GLY PRO CYS SER GLN LYS ALA ASP THR VAL SEQRES 41 A 734 PHE ARG LEU ASN TRP ALA THR TYR LEU ALA SER THR GLU SEQRES 42 A 734 ASN ILE ILE VAL ALA SER PHE ASP GLY ARG GLY SER GLY SEQRES 43 A 734 TYR GLN GLY ASP LYS ILE MET HIS ALA ILE ASN ARG ARG SEQRES 44 A 734 LEU GLY THR PHE GLU VAL GLU ASP GLN ILE GLU ALA ALA SEQRES 45 A 734 ARG GLN PHE SER LYS MET GLY PHE VAL ASP ASN LYS ARG SEQRES 46 A 734 ILE ALA ILE TRP GLY TRP SER TYR GLY GLY TYR VAL THR SEQRES 47 A 734 SER MET VAL LEU GLY SER GLY SER GLY VAL PHE LYS CYS SEQRES 48 A 734 GLY ILE ALA VAL ALA PRO VAL SER ARG TRP GLU TYR TYR SEQRES 49 A 734 ASP SER VAL TYR THR GLU ARG TYR MET GLY LEU PRO THR SEQRES 50 A 734 PRO GLU ASP ASN LEU ASP HIS TYR ARG ASN SER THR VAL SEQRES 51 A 734 MET SER ARG ALA GLU ASN PHE LYS GLN VAL GLU TYR LEU SEQRES 52 A 734 LEU ILE HIS GLY THR ALA ASP ASP ASN VAL HIS PHE GLN SEQRES 53 A 734 GLN SER ALA GLN ILE SER LYS ALA LEU VAL ASP VAL GLY SEQRES 54 A 734 VAL ASP PHE GLN ALA MET TRP TYR THR ASP GLU ASP HIS SEQRES 55 A 734 GLY ILE ALA SER SER THR ALA HIS GLN HIS ILE TYR THR SEQRES 56 A 734 HIS MET SER HIS PHE ILE LYS GLN CYS PHE SER LEU PRO SEQRES 57 A 734 HIS HIS HIS HIS HIS HIS SEQRES 1 B 246 GLU ALA SER ALA THR GLY THR PHE ILE GLU GLN PRO ASN SEQRES 2 B 246 ALA THR GLU CYS ASP PHE SER PRO MET LEU THR GLY VAL SEQRES 3 B 246 ALA PRO GLN VAL TYR ASN PHE LYS ARG LEU VAL PHE SER SEQRES 4 B 246 ASN CYS ASN TYR ASN LEU THR LYS LEU LEU SER LEU PHE SEQRES 5 B 246 ALA VAL ASP GLU PHE SER CYS ASN GLY ILE SER PRO ASP SEQRES 6 B 246 SER ILE ALA ARG GLY CYS TYR SER THR LEU THR VAL ASP SEQRES 7 B 246 TYR PHE ALA TYR PRO LEU SER MET LYS SER TYR ILE ARG SEQRES 8 B 246 PRO GLY SER ALA GLY ASN ILE PRO LEU TYR ASN TYR LYS SEQRES 9 B 246 GLN SER PHE ALA ASN PRO THR CYS ARG VAL MET ALA SER SEQRES 10 B 246 VAL LEU ALA ASN VAL THR ILE THR LYS PRO HIS ALA TYR SEQRES 11 B 246 GLY TYR ILE SER LYS CYS SER ARG LEU THR GLY ALA ASN SEQRES 12 B 246 GLN ASP VAL GLU THR PRO LEU TYR ILE ASN PRO GLY GLU SEQRES 13 B 246 TYR SER ILE CYS ARG ASP PHE SER PRO GLY GLY PHE SER SEQRES 14 B 246 GLU ASP GLY GLN VAL PHE LYS ARG THR LEU THR GLN PHE SEQRES 15 B 246 GLU GLY GLY GLY LEU LEU ILE GLY VAL GLY THR ARG VAL SEQRES 16 B 246 PRO MET THR ASP ASN LEU GLN MET SER PHE ILE ILE SER SEQRES 17 B 246 VAL GLN TYR GLY THR GLY THR ASP SER VAL CYS PRO MET SEQRES 18 B 246 LEU ASP LEU GLY ASP SER LEU THR ILE THR ASN ARG LEU SEQRES 19 B 246 GLY LYS CYS VAL ASP TYR HIS HIS HIS HIS HIS HIS SEQRES 1 C 734 SER ARG LYS THR TYR THR LEU THR ASP TYR LEU LYS ASN SEQRES 2 C 734 THR TYR ARG LEU LYS LEU TYR SER LEU ARG TRP ILE SER SEQRES 3 C 734 ASP HIS GLU TYR LEU TYR LYS GLN GLU ASN ASN ILE LEU SEQRES 4 C 734 VAL PHE ASN ALA GLU TYR GLY ASN SER SER VAL PHE LEU SEQRES 5 C 734 GLU ASN SER THR PHE ASP GLU PHE GLY HIS SER ILE ASN SEQRES 6 C 734 ASP TYR SER ILE SER PRO ASP GLY GLN PHE ILE LEU LEU SEQRES 7 C 734 GLU TYR ASN TYR VAL LYS GLN TRP ARG HIS SER TYR THR SEQRES 8 C 734 ALA SER TYR ASP ILE TYR ASP LEU ASN LYS ARG GLN LEU SEQRES 9 C 734 ILE THR GLU GLU ARG ILE PRO ASN ASN THR GLN TRP VAL SEQRES 10 C 734 THR TRP SER PRO VAL GLY HIS LYS LEU ALA TYR VAL TRP SEQRES 11 C 734 ASN ASN ASP ILE TYR VAL LYS ILE GLU PRO ASN LEU PRO SEQRES 12 C 734 SER TYR ARG ILE THR TRP THR GLY LYS GLU ASP ILE ILE SEQRES 13 C 734 TYR ASN GLY ILE THR ASP TRP VAL TYR GLU GLU GLU VAL SEQRES 14 C 734 PHE SER ALA TYR SER ALA LEU TRP TRP SER PRO ASN GLY SEQRES 15 C 734 THR PHE LEU ALA TYR ALA GLN PHE ASN ASP THR GLU VAL SEQRES 16 C 734 PRO LEU ILE GLU TYR SER PHE TYR SER ASP GLU SER LEU SEQRES 17 C 734 GLN TYR PRO LYS THR VAL ARG VAL PRO TYR PRO LYS ALA SEQRES 18 C 734 GLY ALA VAL ASN PRO THR VAL LYS PHE PHE VAL VAL ASN SEQRES 19 C 734 THR ASP SER LEU SER SER VAL THR ASN ALA THR SER ILE SEQRES 20 C 734 GLN ILE THR ALA PRO ALA SER MET LEU ILE GLY ASP HIS SEQRES 21 C 734 TYR LEU CYS ASP VAL THR TRP ALA THR GLN GLU ARG ILE SEQRES 22 C 734 SER LEU GLN TRP LEU ARG ARG ILE GLN ASN TYR SER VAL SEQRES 23 C 734 MET ASP ILE CYS ASP TYR ASP GLU SER SER GLY ARG TRP SEQRES 24 C 734 ASN CYS LEU VAL ALA ARG GLN HIS ILE GLU MET SER THR SEQRES 25 C 734 THR GLY TRP VAL GLY ARG PHE ARG PRO SER GLU PRO HIS SEQRES 26 C 734 PHE THR LEU ASP GLY ASN SER PHE TYR LYS ILE ILE SER SEQRES 27 C 734 ASN GLU GLU GLY TYR ARG HIS ILE CYS TYR PHE GLN ILE SEQRES 28 C 734 ASP LYS LYS ASP CYS THR PHE ILE THR LYS GLY THR TRP SEQRES 29 C 734 GLU VAL ILE GLY ILE GLU ALA LEU THR SER ASP TYR LEU SEQRES 30 C 734 TYR TYR ILE SER ASN GLU TYR LYS GLY MET PRO GLY GLY SEQRES 31 C 734 ARG ASN LEU TYR LYS ILE GLN LEU SER ASP TYR THR LYS SEQRES 32 C 734 VAL THR CYS LEU SER CYS GLU LEU ASN PRO GLU ARG CYS SEQRES 33 C 734 GLN TYR TYR SER VAL SER PHE SER LYS GLU ALA LYS TYR SEQRES 34 C 734 TYR GLN LEU ARG CYS SER GLY PRO GLY LEU PRO LEU TYR SEQRES 35 C 734 THR LEU HIS SER SER VAL ASN ASP LYS GLY LEU ARG VAL SEQRES 36 C 734 LEU GLU ASP ASN SER ALA LEU ASP LYS MET LEU GLN ASN SEQRES 37 C 734 VAL GLN MET PRO SER LYS LYS LEU ASP PHE ILE ILE LEU SEQRES 38 C 734 ASN GLU THR LYS PHE TRP TYR GLN MET ILE LEU PRO PRO SEQRES 39 C 734 HIS PHE ASP LYS SER LYS LYS TYR PRO LEU LEU LEU ASP SEQRES 40 C 734 VAL TYR ALA GLY PRO CYS SER GLN LYS ALA ASP THR VAL SEQRES 41 C 734 PHE ARG LEU ASN TRP ALA THR TYR LEU ALA SER THR GLU SEQRES 42 C 734 ASN ILE ILE VAL ALA SER PHE ASP GLY ARG GLY SER GLY SEQRES 43 C 734 TYR GLN GLY ASP LYS ILE MET HIS ALA ILE ASN ARG ARG SEQRES 44 C 734 LEU GLY THR PHE GLU VAL GLU ASP GLN ILE GLU ALA ALA SEQRES 45 C 734 ARG GLN PHE SER LYS MET GLY PHE VAL ASP ASN LYS ARG SEQRES 46 C 734 ILE ALA ILE TRP GLY TRP SER TYR GLY GLY TYR VAL THR SEQRES 47 C 734 SER MET VAL LEU GLY SER GLY SER GLY VAL PHE LYS CYS SEQRES 48 C 734 GLY ILE ALA VAL ALA PRO VAL SER ARG TRP GLU TYR TYR SEQRES 49 C 734 ASP SER VAL TYR THR GLU ARG TYR MET GLY LEU PRO THR SEQRES 50 C 734 PRO GLU ASP ASN LEU ASP HIS TYR ARG ASN SER THR VAL SEQRES 51 C 734 MET SER ARG ALA GLU ASN PHE LYS GLN VAL GLU TYR LEU SEQRES 52 C 734 LEU ILE HIS GLY THR ALA ASP ASP ASN VAL HIS PHE GLN SEQRES 53 C 734 GLN SER ALA GLN ILE SER LYS ALA LEU VAL ASP VAL GLY SEQRES 54 C 734 VAL ASP PHE GLN ALA MET TRP TYR THR ASP GLU ASP HIS SEQRES 55 C 734 GLY ILE ALA SER SER THR ALA HIS GLN HIS ILE TYR THR SEQRES 56 C 734 HIS MET SER HIS PHE ILE LYS GLN CYS PHE SER LEU PRO SEQRES 57 C 734 HIS HIS HIS HIS HIS HIS SEQRES 1 D 246 GLU ALA SER ALA THR GLY THR PHE ILE GLU GLN PRO ASN SEQRES 2 D 246 ALA THR GLU CYS ASP PHE SER PRO MET LEU THR GLY VAL SEQRES 3 D 246 ALA PRO GLN VAL TYR ASN PHE LYS ARG LEU VAL PHE SER SEQRES 4 D 246 ASN CYS ASN TYR ASN LEU THR LYS LEU LEU SER LEU PHE SEQRES 5 D 246 ALA VAL ASP GLU PHE SER CYS ASN GLY ILE SER PRO ASP SEQRES 6 D 246 SER ILE ALA ARG GLY CYS TYR SER THR LEU THR VAL ASP SEQRES 7 D 246 TYR PHE ALA TYR PRO LEU SER MET LYS SER TYR ILE ARG SEQRES 8 D 246 PRO GLY SER ALA GLY ASN ILE PRO LEU TYR ASN TYR LYS SEQRES 9 D 246 GLN SER PHE ALA ASN PRO THR CYS ARG VAL MET ALA SER SEQRES 10 D 246 VAL LEU ALA ASN VAL THR ILE THR LYS PRO HIS ALA TYR SEQRES 11 D 246 GLY TYR ILE SER LYS CYS SER ARG LEU THR GLY ALA ASN SEQRES 12 D 246 GLN ASP VAL GLU THR PRO LEU TYR ILE ASN PRO GLY GLU SEQRES 13 D 246 TYR SER ILE CYS ARG ASP PHE SER PRO GLY GLY PHE SER SEQRES 14 D 246 GLU ASP GLY GLN VAL PHE LYS ARG THR LEU THR GLN PHE SEQRES 15 D 246 GLU GLY GLY GLY LEU LEU ILE GLY VAL GLY THR ARG VAL SEQRES 16 D 246 PRO MET THR ASP ASN LEU GLN MET SER PHE ILE ILE SER SEQRES 17 D 246 VAL GLN TYR GLY THR GLY THR ASP SER VAL CYS PRO MET SEQRES 18 D 246 LEU ASP LEU GLY ASP SER LEU THR ILE THR ASN ARG LEU SEQRES 19 D 246 GLY LYS CYS VAL ASP TYR HIS HIS HIS HIS HIS HIS MODRES 4QZV ASN C 229 ASN GLYCOSYLATION SITE MODRES 4QZV ASN A 321 ASN GLYCOSYLATION SITE MODRES 4QZV ASN A 229 ASN GLYCOSYLATION SITE MODRES 4QZV ASN C 321 ASN GLYCOSYLATION SITE MODRES 4QZV ASN A 281 ASN GLYCOSYLATION SITE MODRES 4QZV ASN A 92 ASN GLYCOSYLATION SITE MODRES 4QZV ASN A 85 ASN GLYCOSYLATION SITE MODRES 4QZV ASN C 150 ASN GLYCOSYLATION SITE MODRES 4QZV ASN C 281 ASN GLYCOSYLATION SITE MODRES 4QZV ASN C 85 ASN GLYCOSYLATION SITE MODRES 4QZV ASN C 219 ASN GLYCOSYLATION SITE MODRES 4QZV ASN A 150 ASN GLYCOSYLATION SITE MODRES 4QZV ASN A 219 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET NAG K 1 14 HET NAG K 2 14 HET NAG L 1 14 HET NAG L 2 14 HET NAG A 803 14 HET NAG A 804 14 HET NAG A 812 14 HET NAG C 803 14 HET NAG C 804 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE FORMUL 5 NAG 21(C8 H15 N O6) FORMUL 6 BMA 2(C6 H12 O6) FORMUL 18 HOH *476(H2 O) HELIX 1 1 THR A 44 ASN A 51 1 8 HELIX 2 2 GLU A 91 ASP A 96 5 6 HELIX 3 3 ASP A 200 VAL A 207 1 8 HELIX 4 4 PRO A 290 ILE A 295 1 6 HELIX 5 5 VAL A 341 GLN A 344 5 4 HELIX 6 6 GLU A 421 MET A 425 5 5 HELIX 7 7 LYS A 463 ALA A 465 5 3 HELIX 8 8 ASN A 497 GLN A 505 1 9 HELIX 9 9 ASN A 562 THR A 570 1 9 HELIX 10 10 GLY A 587 HIS A 592 1 6 HELIX 11 11 ALA A 593 ASN A 595 5 3 HELIX 12 12 THR A 600 LYS A 615 1 16 HELIX 13 13 SER A 630 GLY A 641 1 12 HELIX 14 14 ARG A 658 TYR A 662 5 5 HELIX 15 15 ASP A 663 GLY A 672 1 10 HELIX 16 16 ASN A 679 SER A 686 1 8 HELIX 17 17 VAL A 688 VAL A 698 5 11 HELIX 18 18 HIS A 712 ASP A 725 1 14 HELIX 19 19 SER A 744 PHE A 763 1 20 HELIX 20 20 GLN B 29 PHE B 33 5 5 HELIX 21 21 ASN B 44 SER B 50 1 7 HELIX 22 22 ASP B 65 ARG B 69 5 5 HELIX 23 23 PRO B 83 ARG B 91 5 9 HELIX 24 24 GLY B 96 ASN B 102 1 7 HELIX 25 25 CYS B 160 SER B 164 5 5 HELIX 26 26 THR C 44 LYS C 50 1 7 HELIX 27 27 ASP C 200 VAL C 207 1 8 HELIX 28 28 PRO C 290 ILE C 295 1 6 HELIX 29 29 VAL C 341 GLN C 344 5 4 HELIX 30 30 GLU C 421 MET C 425 5 5 HELIX 31 31 LYS C 463 ALA C 465 5 3 HELIX 32 32 ASN C 497 LEU C 504 1 8 HELIX 33 33 ASN C 562 THR C 570 1 9 HELIX 34 34 GLY C 587 HIS C 592 1 6 HELIX 35 35 ALA C 593 ASN C 595 5 3 HELIX 36 36 THR C 600 LYS C 615 1 16 HELIX 37 37 SER C 630 GLY C 641 1 12 HELIX 38 38 ARG C 658 TYR C 662 5 5 HELIX 39 39 ASP C 663 GLY C 672 1 10 HELIX 40 40 ASN C 679 SER C 686 1 8 HELIX 41 41 VAL C 688 VAL C 698 5 11 HELIX 42 42 HIS C 712 GLY C 727 1 16 HELIX 43 43 SER C 744 PHE C 763 1 20 HELIX 44 44 PHE D 19 LEU D 23 5 5 HELIX 45 45 GLN D 29 PHE D 33 5 5 HELIX 46 46 ASN D 44 LEU D 51 1 8 HELIX 47 47 SER D 63 ALA D 68 1 6 HELIX 48 48 PRO D 83 ARG D 91 5 9 HELIX 49 49 GLY D 96 ASN D 102 1 7 HELIX 50 50 CYS D 160 SER D 164 5 5 HELIX 51 51 THR D 180 GLY D 184 5 5 SHEET 1 A 2 LYS A 41 THR A 42 0 SHEET 2 A 2 VAL A 507 GLN A 508 1 O GLN A 508 N LYS A 41 SHEET 1 B 4 ARG A 61 TRP A 62 0 SHEET 2 B 4 GLU A 67 GLN A 72 -1 O LEU A 69 N ARG A 61 SHEET 3 B 4 ASN A 75 ASN A 80 -1 O LEU A 77 N TYR A 70 SHEET 4 B 4 SER A 86 LEU A 90 -1 O LEU A 90 N ILE A 76 SHEET 1 C 4 ASP A 104 ILE A 107 0 SHEET 2 C 4 PHE A 113 LYS A 122 -1 O LEU A 115 N SER A 106 SHEET 3 C 4 TYR A 128 ASP A 136 -1 O ASP A 133 N LEU A 116 SHEET 4 C 4 GLN A 141 LEU A 142 -1 O GLN A 141 N ASP A 136 SHEET 1 D 4 TRP A 154 TRP A 157 0 SHEET 2 D 4 LEU A 164 TRP A 168 -1 O VAL A 167 N TRP A 154 SHEET 3 D 4 ASP A 171 LYS A 175 -1 O TYR A 173 N TYR A 166 SHEET 4 D 4 TYR A 183 ARG A 184 -1 O TYR A 183 N VAL A 174 SHEET 1 E 3 ILE A 194 ASN A 196 0 SHEET 2 E 3 PHE A 222 ASN A 229 -1 O PHE A 228 N TYR A 195 SHEET 3 E 3 LEU A 214 TRP A 216 -1 N TRP A 215 O ALA A 224 SHEET 1 F 4 ILE A 194 ASN A 196 0 SHEET 2 F 4 PHE A 222 ASN A 229 -1 O PHE A 228 N TYR A 195 SHEET 3 F 4 THR A 265 ASN A 272 -1 O LYS A 267 N GLN A 227 SHEET 4 F 4 SER A 284 GLN A 286 -1 O ILE A 285 N VAL A 270 SHEET 1 G 2 LEU A 235 PHE A 240 0 SHEET 2 G 2 LYS A 250 PRO A 255 -1 O VAL A 252 N TYR A 238 SHEET 1 H 4 HIS A 298 THR A 307 0 SHEET 2 H 4 ARG A 310 ARG A 317 -1 O ARG A 310 N ALA A 306 SHEET 3 H 4 TYR A 322 ASP A 331 -1 O ASP A 326 N LEU A 313 SHEET 4 H 4 ARG A 336 CYS A 339 -1 O ASN A 338 N ASP A 329 SHEET 1 I 4 HIS A 298 THR A 307 0 SHEET 2 I 4 ARG A 310 ARG A 317 -1 O ARG A 310 N ALA A 306 SHEET 3 I 4 TYR A 322 ASP A 331 -1 O ASP A 326 N LEU A 313 SHEET 4 I 4 HIS A 345 MET A 348 -1 O GLU A 347 N SER A 323 SHEET 1 J 4 HIS A 363 PHE A 364 0 SHEET 2 J 4 SER A 370 SER A 376 -1 O TYR A 372 N HIS A 363 SHEET 3 J 4 ARG A 382 GLN A 388 -1 O PHE A 387 N PHE A 371 SHEET 4 J 4 THR A 395 PHE A 396 -1 O THR A 395 N TYR A 386 SHEET 1 K 4 VAL A 404 LEU A 410 0 SHEET 2 K 4 TYR A 414 SER A 419 -1 O TYR A 416 N GLU A 408 SHEET 3 K 4 ASN A 430 GLN A 435 -1 O TYR A 432 N TYR A 417 SHEET 4 K 4 VAL A 442 CYS A 444 -1 O THR A 443 N LYS A 433 SHEET 1 L 4 TYR A 457 PHE A 461 0 SHEET 2 L 4 TYR A 467 CYS A 472 -1 O GLN A 469 N SER A 460 SHEET 3 L 4 LEU A 479 SER A 484 -1 O THR A 481 N LEU A 470 SHEET 4 L 4 LYS A 489 GLU A 495 -1 O GLU A 495 N TYR A 480 SHEET 1 M 8 SER A 511 ILE A 518 0 SHEET 2 M 8 LYS A 523 LEU A 530 -1 O LEU A 530 N SER A 511 SHEET 3 M 8 ILE A 574 PHE A 578 -1 O VAL A 575 N ILE A 529 SHEET 4 M 8 TYR A 540 VAL A 546 1 N ASP A 545 O ALA A 576 SHEET 5 M 8 VAL A 619 TRP A 629 1 O ASP A 620 N TYR A 540 SHEET 6 M 8 CYS A 649 VAL A 653 1 O VAL A 653 N GLY A 628 SHEET 7 M 8 GLU A 699 GLY A 705 1 O LEU A 701 N ALA A 652 SHEET 8 M 8 GLN A 731 TYR A 735 1 O GLN A 731 N TYR A 700 SHEET 1 N 5 LYS B 34 PHE B 38 0 SHEET 2 N 5 THR B 74 ALA B 81 -1 O VAL B 77 N LEU B 36 SHEET 3 N 5 GLN B 202 GLN B 210 -1 O SER B 208 N THR B 76 SHEET 4 N 5 THR B 111 VAL B 118 -1 N ALA B 116 O MET B 203 SHEET 5 N 5 PHE B 52 ASN B 60 -1 N ASP B 55 O MET B 115 SHEET 1 O 4 VAL B 146 PRO B 149 0 SHEET 2 O 4 ALA B 129 THR B 140 -1 N THR B 140 O VAL B 146 SHEET 3 O 4 LEU B 187 PRO B 196 -1 O THR B 193 N TYR B 132 SHEET 4 O 4 GLN B 173 THR B 178 -1 N ARG B 177 O LEU B 188 SHEET 1 P 2 LYS C 41 THR C 42 0 SHEET 2 P 2 VAL C 507 GLN C 508 1 O GLN C 508 N LYS C 41 SHEET 1 Q 4 ARG C 61 TRP C 62 0 SHEET 2 Q 4 GLU C 67 LYS C 71 -1 O LEU C 69 N ARG C 61 SHEET 3 Q 4 ASN C 75 ASN C 80 -1 O PHE C 79 N TYR C 68 SHEET 4 Q 4 SER C 86 GLU C 91 -1 O SER C 87 N VAL C 78 SHEET 1 R 4 ASP C 104 ILE C 107 0 SHEET 2 R 4 PHE C 113 LYS C 122 -1 O LEU C 115 N SER C 106 SHEET 3 R 4 TYR C 128 ASP C 136 -1 O SER C 131 N TYR C 118 SHEET 4 R 4 GLN C 141 LEU C 142 -1 O GLN C 141 N ASP C 136 SHEET 1 S 4 TRP C 154 TRP C 157 0 SHEET 2 S 4 LEU C 164 TRP C 168 -1 O VAL C 167 N TRP C 154 SHEET 3 S 4 ASP C 171 LYS C 175 -1 O LYS C 175 N LEU C 164 SHEET 4 S 4 TYR C 183 ARG C 184 -1 O TYR C 183 N VAL C 174 SHEET 1 T 3 ILE C 194 ASN C 196 0 SHEET 2 T 3 PHE C 222 ASN C 229 -1 O PHE C 228 N TYR C 195 SHEET 3 T 3 LEU C 214 TRP C 216 -1 N TRP C 215 O ALA C 224 SHEET 1 U 4 ILE C 194 ASN C 196 0 SHEET 2 U 4 PHE C 222 ASN C 229 -1 O PHE C 228 N TYR C 195 SHEET 3 U 4 THR C 265 ASN C 272 -1 O LYS C 267 N GLN C 227 SHEET 4 U 4 SER C 284 GLN C 286 -1 O ILE C 285 N VAL C 270 SHEET 1 V 2 LEU C 235 PHE C 240 0 SHEET 2 V 2 LYS C 250 PRO C 255 -1 O LYS C 250 N PHE C 240 SHEET 1 W 4 HIS C 298 TRP C 305 0 SHEET 2 W 4 ARG C 310 ARG C 317 -1 O LEU C 316 N TYR C 299 SHEET 3 W 4 TYR C 322 ASP C 331 -1 O ASP C 326 N LEU C 313 SHEET 4 W 4 ARG C 336 CYS C 339 -1 O ASN C 338 N ASP C 329 SHEET 1 X 4 HIS C 298 TRP C 305 0 SHEET 2 X 4 ARG C 310 ARG C 317 -1 O LEU C 316 N TYR C 299 SHEET 3 X 4 TYR C 322 ASP C 331 -1 O ASP C 326 N LEU C 313 SHEET 4 X 4 HIS C 345 MET C 348 -1 O GLU C 347 N SER C 323 SHEET 1 Y 4 HIS C 363 PHE C 364 0 SHEET 2 Y 4 SER C 370 SER C 376 -1 O TYR C 372 N HIS C 363 SHEET 3 Y 4 ARG C 382 GLN C 388 -1 O PHE C 387 N PHE C 371 SHEET 4 Y 4 THR C 395 PHE C 396 -1 O THR C 395 N TYR C 386 SHEET 1 Z 4 VAL C 404 LEU C 410 0 SHEET 2 Z 4 TYR C 414 SER C 419 -1 O TYR C 416 N ALA C 409 SHEET 3 Z 4 ASN C 430 GLN C 435 -1 O TYR C 432 N TYR C 417 SHEET 4 Z 4 VAL C 442 CYS C 444 -1 O THR C 443 N LYS C 433 SHEET 1 AA 4 TYR C 457 PHE C 461 0 SHEET 2 AA 4 TYR C 467 CYS C 472 -1 O ARG C 471 N SER C 458 SHEET 3 AA 4 LEU C 479 SER C 484 -1 O LEU C 479 N CYS C 472 SHEET 4 AA 4 LYS C 489 GLU C 495 -1 O GLU C 495 N TYR C 480 SHEET 1 AB 8 SER C 511 ILE C 518 0 SHEET 2 AB 8 LYS C 523 LEU C 530 -1 O LEU C 530 N SER C 511 SHEET 3 AB 8 ILE C 574 ASP C 579 -1 O ASP C 579 N TRP C 525 SHEET 4 AB 8 TYR C 540 VAL C 546 1 N ASP C 545 O ALA C 576 SHEET 5 AB 8 VAL C 619 TRP C 629 1 O ALA C 625 N LEU C 544 SHEET 6 AB 8 CYS C 649 VAL C 653 1 O VAL C 653 N GLY C 628 SHEET 7 AB 8 GLU C 699 GLY C 705 1 O LEU C 701 N ALA C 652 SHEET 8 AB 8 GLN C 731 TYR C 735 1 O GLN C 731 N TYR C 700 SHEET 1 AC 5 LYS D 34 PHE D 38 0 SHEET 2 AC 5 LEU D 75 ALA D 81 -1 O LEU D 75 N PHE D 38 SHEET 3 AC 5 GLN D 202 VAL D 209 -1 O SER D 208 N THR D 76 SHEET 4 AC 5 THR D 111 VAL D 118 -1 N CYS D 112 O ILE D 207 SHEET 5 AC 5 PHE D 52 ASN D 60 -1 N ASP D 55 O MET D 115 SHEET 1 AD 2 CYS D 41 TYR D 43 0 SHEET 2 AD 2 VAL D 218 PRO D 220 1 O CYS D 219 N TYR D 43 SHEET 1 AE 4 VAL D 146 PRO D 149 0 SHEET 2 AE 4 ALA D 129 THR D 140 -1 N ARG D 138 O THR D 148 SHEET 3 AE 4 LEU D 187 PRO D 196 -1 O ILE D 189 N SER D 137 SHEET 4 AE 4 GLN D 173 THR D 178 -1 N ARG D 177 O LEU D 188 SSBOND 1 CYS A 328 CYS A 339 1555 1555 2.04 SSBOND 2 CYS A 385 CYS A 394 1555 1555 2.04 SSBOND 3 CYS A 444 CYS A 447 1555 1555 2.03 SSBOND 4 CYS A 454 CYS A 472 1555 1555 2.07 SSBOND 5 CYS A 649 CYS A 762 1555 1555 2.04 SSBOND 6 CYS B 17 CYS B 41 1555 1555 2.03 SSBOND 7 CYS B 59 CYS B 112 1555 1555 2.04 SSBOND 8 CYS B 71 CYS B 219 1555 1555 1.99 SSBOND 9 CYS B 136 CYS B 160 1555 1555 2.05 SSBOND 10 CYS C 328 CYS C 339 1555 1555 2.03 SSBOND 11 CYS C 385 CYS C 394 1555 1555 2.04 SSBOND 12 CYS C 444 CYS C 447 1555 1555 2.03 SSBOND 13 CYS C 454 CYS C 472 1555 1555 2.06 SSBOND 14 CYS C 649 CYS C 762 1555 1555 2.05 SSBOND 15 CYS D 17 CYS D 41 1555 1555 2.03 SSBOND 16 CYS D 71 CYS D 219 1555 1555 2.04 SSBOND 17 CYS D 136 CYS D 160 1555 1555 2.05 LINK ND2 ASN A 85 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 92 C1 NAG A 812 1555 1555 1.44 LINK ND2 ASN A 150 C1 NAG A 803 1555 1555 1.45 LINK ND2 ASN A 219 C1 NAG A 804 1555 1555 1.45 LINK ND2 ASN A 229 C1 NAG F 1 1555 1555 1.43 LINK ND2 ASN A 281 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN A 321 C1 NAG H 1 1555 1555 1.43 LINK ND2 ASN C 85 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN C 150 C1 NAG C 803 1555 1555 1.44 LINK ND2 ASN C 219 C1 NAG C 804 1555 1555 1.45 LINK ND2 ASN C 229 C1 NAG J 1 1555 1555 1.42 LINK ND2 ASN C 281 C1 NAG K 1 1555 1555 1.44 LINK ND2 ASN C 321 C1 NAG L 1 1555 1555 1.43 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.46 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.43 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.42 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.45 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.44 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.44 CISPEP 1 GLY A 474 PRO A 475 0 5.89 CISPEP 2 ALA B 95 GLY B 96 0 -6.36 CISPEP 3 GLY C 474 PRO C 475 0 8.43 CISPEP 4 ALA D 95 GLY D 96 0 1.64 CRYST1 78.801 203.166 207.753 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012690 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004922 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004813 0.00000