HEADER TRANSFERASE 01-AUG-14 4R0N TITLE HEXAGONAL FORM OF PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; COMPND 3 CHAIN: A, C, E, G, I, K; COMPND 4 SYNONYM: DEPHOSPHO-COA PYROPHOSPHORYLASE, PANTETHEINE-PHOSPHATE COMPND 5 ADENYLYLTRANSFERASE; COMPND 6 EC: 2.7.7.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS BT1; SOURCE 3 ORGANISM_TAXID: 1010836; SOURCE 4 GENE: COAD, HKBT1_3114; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOTIDYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.I.TIMOFEEV,E.A.SMIRNOVA,L.A.CHUPOVA,R.S.ESIPOV,I.P.KURANOVA REVDAT 2 20-SEP-23 4R0N 1 REMARK REVDAT 1 13-AUG-14 4R0N 0 JRNL AUTH V.I.TIMOFEEV,E.A.SMIRNOVA,L.A.CHUPOVA,R.S.ESIPOV, JRNL AUTH 2 I.P.KURANOVA JRNL TITL HEXAGONAL FORM OF PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE JRNL TITL 2 FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 54681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2916 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3697 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3590 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.4020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7158 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 263 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.07000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.239 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.204 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.154 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.194 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7310 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9903 ; 1.350 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 924 ; 5.567 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 318 ;32.686 ;23.396 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1191 ;17.556 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;19.409 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1166 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5478 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 157 REMARK 3 ORIGIN FOR THE GROUP (A): -2.7646 13.8440 -3.9186 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.0805 REMARK 3 T33: 0.0434 T12: 0.0098 REMARK 3 T13: 0.0226 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.9028 L22: 2.8467 REMARK 3 L33: 0.9936 L12: 0.9524 REMARK 3 L13: -0.9317 L23: -0.9074 REMARK 3 S TENSOR REMARK 3 S11: -0.1374 S12: 0.2183 S13: -0.1079 REMARK 3 S21: -0.4035 S22: 0.0404 S23: -0.3121 REMARK 3 S31: 0.1530 S32: -0.0354 S33: 0.0970 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 157 REMARK 3 ORIGIN FOR THE GROUP (A): -36.3790 19.0096 -6.1251 REMARK 3 T TENSOR REMARK 3 T11: 0.0846 T22: 0.1273 REMARK 3 T33: 0.0271 T12: -0.0043 REMARK 3 T13: -0.0200 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 1.8857 L22: 3.2701 REMARK 3 L33: 0.5796 L12: -0.5910 REMARK 3 L13: 0.5303 L23: -0.2853 REMARK 3 S TENSOR REMARK 3 S11: 0.1065 S12: 0.1970 S13: -0.1681 REMARK 3 S21: -0.3092 S22: -0.0485 S23: 0.2289 REMARK 3 S31: 0.1080 S32: -0.0122 S33: -0.0579 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 2 E 157 REMARK 3 ORIGIN FOR THE GROUP (A): -2.7637 47.5920 10.7621 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.0877 REMARK 3 T33: 0.0512 T12: -0.0095 REMARK 3 T13: -0.0389 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.9722 L22: 2.4701 REMARK 3 L33: 0.9834 L12: -0.9197 REMARK 3 L13: 0.7541 L23: -0.9664 REMARK 3 S TENSOR REMARK 3 S11: -0.1256 S12: -0.2228 S13: 0.1460 REMARK 3 S21: 0.3963 S22: 0.0313 S23: -0.3334 REMARK 3 S31: -0.1848 S32: -0.0173 S33: 0.0943 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 2 G 157 REMARK 3 ORIGIN FOR THE GROUP (A): -14.3490 18.4791 23.6790 REMARK 3 T TENSOR REMARK 3 T11: 0.1176 T22: 0.1260 REMARK 3 T33: 0.0110 T12: 0.0192 REMARK 3 T13: -0.0009 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 2.4544 L22: 1.4477 REMARK 3 L33: 1.1572 L12: 0.5147 REMARK 3 L13: 0.1030 L23: -0.7740 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: -0.4050 S13: 0.0058 REMARK 3 S21: 0.2388 S22: 0.0929 S23: 0.0920 REMARK 3 S31: -0.1103 S32: -0.1760 S33: -0.0570 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 2 I 157 REMARK 3 ORIGIN FOR THE GROUP (A): -36.3826 42.4421 12.9819 REMARK 3 T TENSOR REMARK 3 T11: 0.0845 T22: 0.1404 REMARK 3 T33: 0.0355 T12: 0.0049 REMARK 3 T13: 0.0212 T23: -0.0275 REMARK 3 L TENSOR REMARK 3 L11: 1.2856 L22: 3.1673 REMARK 3 L33: 0.4861 L12: 0.5057 REMARK 3 L13: -0.3654 L23: -0.2649 REMARK 3 S TENSOR REMARK 3 S11: 0.0852 S12: -0.1961 S13: 0.1667 REMARK 3 S21: 0.3041 S22: -0.0587 S23: 0.2508 REMARK 3 S31: -0.0929 S32: -0.0208 S33: -0.0265 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 2 K 157 REMARK 3 ORIGIN FOR THE GROUP (A): -14.3539 42.9695 -16.8361 REMARK 3 T TENSOR REMARK 3 T11: 0.1208 T22: 0.1289 REMARK 3 T33: 0.0065 T12: -0.0156 REMARK 3 T13: -0.0055 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.3553 L22: 1.3868 REMARK 3 L33: 0.8197 L12: -0.3255 REMARK 3 L13: -0.1251 L23: -0.6126 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.4543 S13: -0.0133 REMARK 3 S21: -0.2676 S22: 0.0646 S23: 0.0687 REMARK 3 S31: 0.0982 S32: -0.1452 S33: -0.0650 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4R0N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086750. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57597 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4E1A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: COUNTER DIFFUSION, COUNTER-DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.54867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.77433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -215.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, G, I, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 10 61.89 34.26 REMARK 500 ALA A 40 65.10 -153.53 REMARK 500 LYS A 41 101.27 -49.99 REMARK 500 THR A 42 110.26 -33.83 REMARK 500 THR A 83 15.81 -145.65 REMARK 500 PRO C 39 21.42 -61.89 REMARK 500 LYS C 41 -92.52 26.33 REMARK 500 THR C 42 -14.14 157.51 REMARK 500 ALA C 109 -8.68 -144.66 REMARK 500 PHE E 10 59.83 36.43 REMARK 500 ALA E 40 -100.36 -107.45 REMARK 500 LYS E 41 112.01 -9.93 REMARK 500 THR E 42 -79.86 -32.61 REMARK 500 ALA E 109 -4.55 -152.48 REMARK 500 LEU E 156 82.45 -61.13 REMARK 500 PHE G 10 64.98 36.97 REMARK 500 LYS G 41 -88.01 130.54 REMARK 500 THR G 42 -82.55 178.16 REMARK 500 ARG G 155 27.98 -77.42 REMARK 500 LYS I 41 13.79 -54.82 REMARK 500 MET I 44 -62.46 -121.20 REMARK 500 ALA I 109 -3.03 -140.93 REMARK 500 LEU I 156 -15.09 -42.21 REMARK 500 PHE K 10 68.27 31.91 REMARK 500 ALA K 40 24.84 -71.80 REMARK 500 THR K 42 92.26 169.21 REMARK 500 LEU K 156 27.20 -73.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 G 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 G 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 I 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 K 201 DBREF 4R0N A 2 157 UNP W6HGL0 W6HGL0_MYCTX 2 157 DBREF 4R0N C 2 157 UNP W6HGL0 W6HGL0_MYCTX 2 157 DBREF 4R0N E 2 157 UNP W6HGL0 W6HGL0_MYCTX 2 157 DBREF 4R0N G 2 157 UNP W6HGL0 W6HGL0_MYCTX 2 157 DBREF 4R0N I 2 157 UNP W6HGL0 W6HGL0_MYCTX 2 157 DBREF 4R0N K 2 157 UNP W6HGL0 W6HGL0_MYCTX 2 157 SEQRES 1 A 156 THR GLY ALA VAL CYS PRO GLY SER PHE ASP PRO VAL THR SEQRES 2 A 156 LEU GLY HIS VAL ASP ILE PHE GLU ARG ALA ALA ALA GLN SEQRES 3 A 156 PHE ASP GLU VAL VAL VAL ALA ILE LEU VAL ASN PRO ALA SEQRES 4 A 156 LYS THR GLY MET PHE ASP LEU ASP GLU ARG ILE ALA MET SEQRES 5 A 156 VAL LYS GLU SER THR THR HIS LEU PRO ASN LEU ARG VAL SEQRES 6 A 156 GLN VAL GLY HIS GLY LEU VAL VAL ASP PHE VAL ARG SER SEQRES 7 A 156 CYS GLY MET THR ALA ILE VAL LYS GLY LEU ARG THR GLY SEQRES 8 A 156 THR ASP PHE GLU TYR GLU LEU GLN MET ALA GLN MET ASN SEQRES 9 A 156 LYS HIS ILE ALA GLY VAL ASP THR PHE PHE VAL ALA THR SEQRES 10 A 156 ALA PRO ARG TYR SER PHE VAL SER SER SER LEU ALA LYS SEQRES 11 A 156 GLU VAL ALA MET LEU GLY GLY ASP VAL SER GLU LEU LEU SEQRES 12 A 156 PRO GLU PRO VAL ASN ARG ARG LEU ARG ASP ARG LEU ASN SEQRES 1 C 156 THR GLY ALA VAL CYS PRO GLY SER PHE ASP PRO VAL THR SEQRES 2 C 156 LEU GLY HIS VAL ASP ILE PHE GLU ARG ALA ALA ALA GLN SEQRES 3 C 156 PHE ASP GLU VAL VAL VAL ALA ILE LEU VAL ASN PRO ALA SEQRES 4 C 156 LYS THR GLY MET PHE ASP LEU ASP GLU ARG ILE ALA MET SEQRES 5 C 156 VAL LYS GLU SER THR THR HIS LEU PRO ASN LEU ARG VAL SEQRES 6 C 156 GLN VAL GLY HIS GLY LEU VAL VAL ASP PHE VAL ARG SER SEQRES 7 C 156 CYS GLY MET THR ALA ILE VAL LYS GLY LEU ARG THR GLY SEQRES 8 C 156 THR ASP PHE GLU TYR GLU LEU GLN MET ALA GLN MET ASN SEQRES 9 C 156 LYS HIS ILE ALA GLY VAL ASP THR PHE PHE VAL ALA THR SEQRES 10 C 156 ALA PRO ARG TYR SER PHE VAL SER SER SER LEU ALA LYS SEQRES 11 C 156 GLU VAL ALA MET LEU GLY GLY ASP VAL SER GLU LEU LEU SEQRES 12 C 156 PRO GLU PRO VAL ASN ARG ARG LEU ARG ASP ARG LEU ASN SEQRES 1 E 156 THR GLY ALA VAL CYS PRO GLY SER PHE ASP PRO VAL THR SEQRES 2 E 156 LEU GLY HIS VAL ASP ILE PHE GLU ARG ALA ALA ALA GLN SEQRES 3 E 156 PHE ASP GLU VAL VAL VAL ALA ILE LEU VAL ASN PRO ALA SEQRES 4 E 156 LYS THR GLY MET PHE ASP LEU ASP GLU ARG ILE ALA MET SEQRES 5 E 156 VAL LYS GLU SER THR THR HIS LEU PRO ASN LEU ARG VAL SEQRES 6 E 156 GLN VAL GLY HIS GLY LEU VAL VAL ASP PHE VAL ARG SER SEQRES 7 E 156 CYS GLY MET THR ALA ILE VAL LYS GLY LEU ARG THR GLY SEQRES 8 E 156 THR ASP PHE GLU TYR GLU LEU GLN MET ALA GLN MET ASN SEQRES 9 E 156 LYS HIS ILE ALA GLY VAL ASP THR PHE PHE VAL ALA THR SEQRES 10 E 156 ALA PRO ARG TYR SER PHE VAL SER SER SER LEU ALA LYS SEQRES 11 E 156 GLU VAL ALA MET LEU GLY GLY ASP VAL SER GLU LEU LEU SEQRES 12 E 156 PRO GLU PRO VAL ASN ARG ARG LEU ARG ASP ARG LEU ASN SEQRES 1 G 156 THR GLY ALA VAL CYS PRO GLY SER PHE ASP PRO VAL THR SEQRES 2 G 156 LEU GLY HIS VAL ASP ILE PHE GLU ARG ALA ALA ALA GLN SEQRES 3 G 156 PHE ASP GLU VAL VAL VAL ALA ILE LEU VAL ASN PRO ALA SEQRES 4 G 156 LYS THR GLY MET PHE ASP LEU ASP GLU ARG ILE ALA MET SEQRES 5 G 156 VAL LYS GLU SER THR THR HIS LEU PRO ASN LEU ARG VAL SEQRES 6 G 156 GLN VAL GLY HIS GLY LEU VAL VAL ASP PHE VAL ARG SER SEQRES 7 G 156 CYS GLY MET THR ALA ILE VAL LYS GLY LEU ARG THR GLY SEQRES 8 G 156 THR ASP PHE GLU TYR GLU LEU GLN MET ALA GLN MET ASN SEQRES 9 G 156 LYS HIS ILE ALA GLY VAL ASP THR PHE PHE VAL ALA THR SEQRES 10 G 156 ALA PRO ARG TYR SER PHE VAL SER SER SER LEU ALA LYS SEQRES 11 G 156 GLU VAL ALA MET LEU GLY GLY ASP VAL SER GLU LEU LEU SEQRES 12 G 156 PRO GLU PRO VAL ASN ARG ARG LEU ARG ASP ARG LEU ASN SEQRES 1 I 156 THR GLY ALA VAL CYS PRO GLY SER PHE ASP PRO VAL THR SEQRES 2 I 156 LEU GLY HIS VAL ASP ILE PHE GLU ARG ALA ALA ALA GLN SEQRES 3 I 156 PHE ASP GLU VAL VAL VAL ALA ILE LEU VAL ASN PRO ALA SEQRES 4 I 156 LYS THR GLY MET PHE ASP LEU ASP GLU ARG ILE ALA MET SEQRES 5 I 156 VAL LYS GLU SER THR THR HIS LEU PRO ASN LEU ARG VAL SEQRES 6 I 156 GLN VAL GLY HIS GLY LEU VAL VAL ASP PHE VAL ARG SER SEQRES 7 I 156 CYS GLY MET THR ALA ILE VAL LYS GLY LEU ARG THR GLY SEQRES 8 I 156 THR ASP PHE GLU TYR GLU LEU GLN MET ALA GLN MET ASN SEQRES 9 I 156 LYS HIS ILE ALA GLY VAL ASP THR PHE PHE VAL ALA THR SEQRES 10 I 156 ALA PRO ARG TYR SER PHE VAL SER SER SER LEU ALA LYS SEQRES 11 I 156 GLU VAL ALA MET LEU GLY GLY ASP VAL SER GLU LEU LEU SEQRES 12 I 156 PRO GLU PRO VAL ASN ARG ARG LEU ARG ASP ARG LEU ASN SEQRES 1 K 156 THR GLY ALA VAL CYS PRO GLY SER PHE ASP PRO VAL THR SEQRES 2 K 156 LEU GLY HIS VAL ASP ILE PHE GLU ARG ALA ALA ALA GLN SEQRES 3 K 156 PHE ASP GLU VAL VAL VAL ALA ILE LEU VAL ASN PRO ALA SEQRES 4 K 156 LYS THR GLY MET PHE ASP LEU ASP GLU ARG ILE ALA MET SEQRES 5 K 156 VAL LYS GLU SER THR THR HIS LEU PRO ASN LEU ARG VAL SEQRES 6 K 156 GLN VAL GLY HIS GLY LEU VAL VAL ASP PHE VAL ARG SER SEQRES 7 K 156 CYS GLY MET THR ALA ILE VAL LYS GLY LEU ARG THR GLY SEQRES 8 K 156 THR ASP PHE GLU TYR GLU LEU GLN MET ALA GLN MET ASN SEQRES 9 K 156 LYS HIS ILE ALA GLY VAL ASP THR PHE PHE VAL ALA THR SEQRES 10 K 156 ALA PRO ARG TYR SER PHE VAL SER SER SER LEU ALA LYS SEQRES 11 K 156 GLU VAL ALA MET LEU GLY GLY ASP VAL SER GLU LEU LEU SEQRES 12 K 156 PRO GLU PRO VAL ASN ARG ARG LEU ARG ASP ARG LEU ASN HET SO4 A 201 5 HET SO4 C 201 5 HET SO4 C 202 5 HET SO4 E 201 5 HET SO4 G 201 5 HET SO4 G 202 5 HET SO4 I 201 5 HET SO4 K 201 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 8(O4 S 2-) FORMUL 15 HOH *263(H2 O) HELIX 1 1 THR A 14 PHE A 28 1 15 HELIX 2 2 ASP A 46 THR A 58 1 13 HELIX 3 3 LEU A 72 CYS A 80 1 9 HELIX 4 4 ASP A 94 GLY A 110 1 17 HELIX 5 5 ALA A 119 SER A 123 5 5 HELIX 6 6 SER A 126 MET A 135 1 10 HELIX 7 7 VAL A 140 LEU A 144 5 5 HELIX 8 8 PRO A 145 LEU A 156 1 12 HELIX 9 9 THR C 14 PHE C 28 1 15 HELIX 10 10 ASP C 46 THR C 58 1 13 HELIX 11 11 LEU C 72 CYS C 80 1 9 HELIX 12 12 ASP C 94 GLY C 110 1 17 HELIX 13 13 ALA C 119 SER C 123 5 5 HELIX 14 14 SER C 126 LEU C 136 1 11 HELIX 15 15 VAL C 140 LEU C 144 5 5 HELIX 16 16 PRO C 145 LEU C 156 1 12 HELIX 17 17 THR E 14 PHE E 28 1 15 HELIX 18 18 ASP E 46 SER E 57 1 12 HELIX 19 19 LEU E 72 CYS E 80 1 9 HELIX 20 20 ASP E 94 GLY E 110 1 17 HELIX 21 21 ALA E 119 SER E 123 5 5 HELIX 22 22 SER E 126 MET E 135 1 10 HELIX 23 23 VAL E 140 LEU E 144 5 5 HELIX 24 24 PRO E 145 LEU E 156 1 12 HELIX 25 25 THR G 14 PHE G 28 1 15 HELIX 26 26 ASP G 46 THR G 58 1 13 HELIX 27 27 LEU G 72 CYS G 80 1 9 HELIX 28 28 ASP G 94 GLY G 110 1 17 HELIX 29 29 ALA G 119 SER G 123 5 5 HELIX 30 30 SER G 126 LEU G 136 1 11 HELIX 31 31 VAL G 140 LEU G 144 5 5 HELIX 32 32 PRO G 145 ARG G 153 1 9 HELIX 33 33 THR I 14 PHE I 28 1 15 HELIX 34 34 ASP I 46 THR I 58 1 13 HELIX 35 35 LEU I 72 CYS I 80 1 9 HELIX 36 36 ASP I 94 GLY I 110 1 17 HELIX 37 37 ALA I 119 SER I 123 5 5 HELIX 38 38 SER I 126 LEU I 136 1 11 HELIX 39 39 VAL I 140 LEU I 144 5 5 HELIX 40 40 PRO I 145 LEU I 156 1 12 HELIX 41 41 THR K 14 PHE K 28 1 15 HELIX 42 42 ASP K 46 THR K 58 1 13 HELIX 43 43 LEU K 72 CYS K 80 1 9 HELIX 44 44 ASP K 94 GLY K 110 1 17 HELIX 45 45 ALA K 119 SER K 123 5 5 HELIX 46 46 SER K 126 LEU K 136 1 11 HELIX 47 47 VAL K 140 LEU K 144 5 5 HELIX 48 48 PRO K 145 ARG K 153 1 9 SHEET 1 A 3 GLY A 3 GLY A 8 0 SHEET 2 A 3 GLU A 30 LEU A 36 1 O VAL A 32 N CYS A 6 SHEET 3 A 3 LEU A 64 GLY A 69 1 O GLN A 67 N ILE A 35 SHEET 1 B 2 ALA A 84 LEU A 89 0 SHEET 2 B 2 ASP A 112 ALA A 117 1 O PHE A 114 N ILE A 85 SHEET 1 C 3 GLY C 3 GLY C 8 0 SHEET 2 C 3 GLU C 30 LEU C 36 1 O LEU C 36 N GLY C 8 SHEET 3 C 3 LEU C 64 GLY C 69 1 O GLY C 69 N ILE C 35 SHEET 1 D 2 ALA C 84 LEU C 89 0 SHEET 2 D 2 ASP C 112 ALA C 117 1 O PHE C 114 N ILE C 85 SHEET 1 E 3 GLY E 3 GLY E 8 0 SHEET 2 E 3 GLU E 30 LEU E 36 1 O VAL E 32 N CYS E 6 SHEET 3 E 3 LEU E 64 GLY E 69 1 O GLN E 67 N VAL E 33 SHEET 1 F 2 ALA E 84 LEU E 89 0 SHEET 2 F 2 ASP E 112 ALA E 117 1 O PHE E 114 N ILE E 85 SHEET 1 G 3 GLY G 3 GLY G 8 0 SHEET 2 G 3 GLU G 30 ILE G 35 1 O VAL G 32 N CYS G 6 SHEET 3 G 3 LEU G 64 VAL G 68 1 O GLN G 67 N VAL G 33 SHEET 1 H 2 ALA G 84 LEU G 89 0 SHEET 2 H 2 ASP G 112 ALA G 117 1 O PHE G 114 N ILE G 85 SHEET 1 I 3 GLY I 3 GLY I 8 0 SHEET 2 I 3 GLU I 30 LEU I 36 1 O LEU I 36 N GLY I 8 SHEET 3 I 3 LEU I 64 GLY I 69 1 O GLY I 69 N ILE I 35 SHEET 1 J 2 ALA I 84 LEU I 89 0 SHEET 2 J 2 ASP I 112 ALA I 117 1 O PHE I 114 N ILE I 85 SHEET 1 K 3 GLY K 3 GLY K 8 0 SHEET 2 K 3 GLU K 30 ILE K 35 1 O VAL K 32 N CYS K 6 SHEET 3 K 3 LEU K 64 VAL K 68 1 O ARG K 65 N VAL K 33 SHEET 1 L 2 ALA K 84 LEU K 89 0 SHEET 2 L 2 ASP K 112 ALA K 117 1 O PHE K 114 N ILE K 85 CISPEP 1 ASP A 11 PRO A 12 0 4.40 CISPEP 2 PRO A 39 ALA A 40 0 -0.04 CISPEP 3 ASP C 11 PRO C 12 0 2.06 CISPEP 4 THR C 91 GLY C 92 0 -25.21 CISPEP 5 ASP E 11 PRO E 12 0 1.48 CISPEP 6 ASP G 11 PRO G 12 0 -0.03 CISPEP 7 THR G 42 GLY G 43 0 0.05 CISPEP 8 ASP I 11 PRO I 12 0 2.95 CISPEP 9 THR I 42 GLY I 43 0 0.03 CISPEP 10 ASP K 11 PRO K 12 0 1.40 CISPEP 11 THR K 42 GLY K 43 0 -0.04 SITE 1 AC1 7 HIS A 17 ARG A 90 SER A 126 SER A 127 SITE 2 AC1 7 HOH A 306 HOH A 315 HOH A 327 SITE 1 AC2 7 HIS C 17 ARG C 90 SER C 126 SER C 127 SITE 2 AC2 7 HOH C 310 HOH C 326 HOH C 339 SITE 1 AC3 5 PRO C 120 ARG C 121 ARG G 121 SO4 G 202 SITE 2 AC3 5 HOH I 336 SITE 1 AC4 7 HIS E 17 ARG E 90 SER E 126 SER E 127 SITE 2 AC4 7 HOH E 314 HOH E 317 HOH E 332 SITE 1 AC5 6 HIS G 17 ARG G 90 SER G 126 SER G 127 SITE 2 AC5 6 HOH G 313 HOH G 326 SITE 1 AC6 6 ARG C 121 SO4 C 202 PRO G 120 ARG G 121 SITE 2 AC6 6 HOH G 322 HOH G 335 SITE 1 AC7 5 HIS I 17 ARG I 90 SER I 126 SER I 127 SITE 2 AC7 5 HOH I 319 SITE 1 AC8 6 HIS K 17 ARG K 90 SER K 126 SER K 127 SITE 2 AC8 6 HOH K 304 HOH K 333 CRYST1 106.472 106.472 71.323 90.00 90.00 120.00 P 32 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009392 0.005423 0.000000 0.00000 SCALE2 0.000000 0.010845 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014021 0.00000