HEADER OXIDOREDUCTASE 04-AUG-14 4R16 TITLE STRUCTURE OF UDP-D-MANNAC DEHDROGEANSE FROM PYROCOCCUS HORIKOSHII COMPND MOL_ID: 1; COMPND 2 MOLECULE: 418AA LONG HYPOTHETICAL UDP-N-ACETYL-D-MANNOSAMINURONIC COMPND 3 ACID DEHYDROGENASE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: UDP-D-MANNAC DEHDROGEANSE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS HORIKOSHII OT3; SOURCE 3 ORGANISM_TAXID: 70601; SOURCE 4 GENE: PH1618; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROSSMANN FOLD, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.J.PAMPA,N.K.LOKANATH,R.V.RAI,N.KUNISHIMA REVDAT 1 14-OCT-15 4R16 0 JRNL AUTH K.J.PAMPA,N.K.LOKANATH,R.V.RAI,N.KUNISHIMA JRNL TITL STRUCTURE OF UDP-D-MANNAC DEHDROGEANSE FROM PYROCOCCUS JRNL TITL 2 HORIKOSHII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 135911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 6902 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6498 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 1012 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.25900 REMARK 3 B22 (A**2) : -0.55900 REMARK 3 B33 (A**2) : 4.81800 REMARK 3 B12 (A**2) : -1.01800 REMARK 3 B13 (A**2) : 1.54800 REMARK 3 B23 (A**2) : 1.52800 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.173 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.685 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.126 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.840 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 39.29 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : SAG.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4R16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-AUG-14. REMARK 100 THE RCSB ID CODE IS RCSB086769. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9311, 0.9721, 0.9521 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 135913 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, 0.1M HEPES, PH 7.1, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 54.40 -102.87 REMARK 500 GLU A 50 -3.50 69.73 REMARK 500 VAL A 142 -53.33 -131.19 REMARK 500 ARG A 152 -0.84 -140.73 REMARK 500 ARG A 157 24.76 -141.18 REMARK 500 PHE A 187 -19.28 -144.09 REMARK 500 LYS A 402 -88.90 -101.97 REMARK 500 LEU B 8 60.32 -101.38 REMARK 500 SER B 41 90.62 100.60 REMARK 500 VAL B 43 115.98 14.01 REMARK 500 ALA B 44 119.82 54.16 REMARK 500 GLU B 50 -9.43 77.74 REMARK 500 VAL B 142 -57.47 -132.54 REMARK 500 ARG B 157 35.78 -150.98 REMARK 500 PHE B 187 -10.34 -140.74 REMARK 500 CYS B 258 -62.02 -122.30 REMARK 500 ARG B 398 19.74 -141.50 REMARK 500 LYS B 402 -86.22 -97.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 886 DISTANCE = 5.25 ANGSTROMS REMARK 525 HOH A 946 DISTANCE = 5.45 ANGSTROMS REMARK 525 HOH A 963 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH A 994 DISTANCE = 5.52 ANGSTROMS REMARK 525 HOH A1074 DISTANCE = 5.33 ANGSTROMS REMARK 525 HOH B 960 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH B1045 DISTANCE = 7.46 ANGSTROMS REMARK 525 HOH B1071 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH B1077 DISTANCE = 5.55 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAJ A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAJ B 501 DBREF 4R16 A 1 418 UNP O59284 O59284_PYRHO 1 418 DBREF 4R16 B 1 418 UNP O59284 O59284_PYRHO 1 418 SEQRES 1 A 418 MSE ARG ILE ALA VAL LEU GLY LEU GLY TYR ILE GLY LEU SEQRES 2 A 418 PRO THR ALA ILE MSE PHE ALA SER SER GLY TYR ASP VAL SEQRES 3 A 418 VAL GLY TYR ASP ILE ARG SER GLU VAL ILE LYS LYS ILE SEQRES 4 A 418 ASN SER GLY VAL ALA HIS ILE ILE GLU PRO GLU ILE ASP SEQRES 5 A 418 ARG ARG LEU LYS GLU VAL LEU SER LEU GLY LYS LEU LYS SEQRES 6 A 418 VAL THR ASP ARG VAL GLU ASP LEU LYS GLY SER ASN VAL SEQRES 7 A 418 PHE ILE ILE CYS VAL GLN THR PRO LEU SER GLY ASP ASP SEQRES 8 A 418 PRO ASP LEU SER TYR LEU GLU ARG ALA ILE ARG THR VAL SEQRES 9 A 418 ALA GLU VAL MSE ASP ARG GLY ALA LEU VAL ILE ILE GLU SEQRES 10 A 418 SER THR ILE PRO PRO GLY THR THR GLU LYS MSE ALA ARG SEQRES 11 A 418 LEU LEU GLU ASN LEU THR GLY LEU ARG GLU GLY VAL ASP SEQRES 12 A 418 PHE TYR VAL ALA HIS ALA PRO GLU ARG VAL MSE PRO GLY SEQRES 13 A 418 ARG ILE PHE LYS GLU LEU VAL TYR ASN SER ARG ILE ILE SEQRES 14 A 418 GLY GLY VAL SER GLU LYS ALA ALA ASN LEU ALA GLU LYS SEQRES 15 A 418 LEU TYR ARG SER PHE VAL LYS GLY ARG ILE PHE LEU THR SEQRES 16 A 418 ASN ALA THR THR ALA GLU MSE VAL LYS LEU MSE GLU ASN SEQRES 17 A 418 THR PHE ARG ASP VAL ASN ILE ALA LEU ALA ASN GLU PHE SEQRES 18 A 418 ALA LEU LEU ALA HIS GLN TYR GLY VAL ASN VAL TYR GLU SEQRES 19 A 418 ALA ILE GLU LEU ALA ASN THR HIS PRO ARG VAL LYS ILE SEQRES 20 A 418 HIS THR PRO GLY ILE GLY VAL GLY GLY HIS CYS LEU PRO SEQRES 21 A 418 LYS ASP PRO TYR LEU LEU LEU SER ASN ALA LYS GLU ASP SEQRES 22 A 418 PHE GLY LEU ILE ARG ILE ALA ARG ARG ILE ASN GLU ARG SEQRES 23 A 418 MSE PRO ALA PHE ALA ALA GLY LEU LEU PHE GLU ALA LEU SEQRES 24 A 418 GLU LYS ALA ASN ILE LYS PRO SER GLU ALA ILE ILE ALA SEQRES 25 A 418 VAL LEU GLY LEU ALA TYR LYS GLY GLY THR ASP ASP THR SEQRES 26 A 418 ARG ASN SER PRO ALA LEU LYS PHE VAL GLU ILE ILE ARG SEQRES 27 A 418 ASN SER VAL LYS GLU VAL ARG THR TYR ASP PRO TYR VAL SEQRES 28 A 418 ARG GLY THR HIS ASP SER LEU GLU LYS VAL VAL GLU GLY SEQRES 29 A 418 ALA ASP ALA ILE VAL ILE ALA THR ASP HIS PRO GLU PHE SEQRES 30 A 418 LYS SER VAL ASN TRP GLU SER ILE GLY LYS SER MSE ARG SEQRES 31 A 418 HIS LYS ILE ILE ILE ASP GLY ARG ASN ILE ILE LYS GLU SEQRES 32 A 418 PRO PRO VAL GLY PHE ILE PHE ARG GLY ILE GLY ARG GLY SEQRES 33 A 418 ASP VAL SEQRES 1 B 418 MSE ARG ILE ALA VAL LEU GLY LEU GLY TYR ILE GLY LEU SEQRES 2 B 418 PRO THR ALA ILE MSE PHE ALA SER SER GLY TYR ASP VAL SEQRES 3 B 418 VAL GLY TYR ASP ILE ARG SER GLU VAL ILE LYS LYS ILE SEQRES 4 B 418 ASN SER GLY VAL ALA HIS ILE ILE GLU PRO GLU ILE ASP SEQRES 5 B 418 ARG ARG LEU LYS GLU VAL LEU SER LEU GLY LYS LEU LYS SEQRES 6 B 418 VAL THR ASP ARG VAL GLU ASP LEU LYS GLY SER ASN VAL SEQRES 7 B 418 PHE ILE ILE CYS VAL GLN THR PRO LEU SER GLY ASP ASP SEQRES 8 B 418 PRO ASP LEU SER TYR LEU GLU ARG ALA ILE ARG THR VAL SEQRES 9 B 418 ALA GLU VAL MSE ASP ARG GLY ALA LEU VAL ILE ILE GLU SEQRES 10 B 418 SER THR ILE PRO PRO GLY THR THR GLU LYS MSE ALA ARG SEQRES 11 B 418 LEU LEU GLU ASN LEU THR GLY LEU ARG GLU GLY VAL ASP SEQRES 12 B 418 PHE TYR VAL ALA HIS ALA PRO GLU ARG VAL MSE PRO GLY SEQRES 13 B 418 ARG ILE PHE LYS GLU LEU VAL TYR ASN SER ARG ILE ILE SEQRES 14 B 418 GLY GLY VAL SER GLU LYS ALA ALA ASN LEU ALA GLU LYS SEQRES 15 B 418 LEU TYR ARG SER PHE VAL LYS GLY ARG ILE PHE LEU THR SEQRES 16 B 418 ASN ALA THR THR ALA GLU MSE VAL LYS LEU MSE GLU ASN SEQRES 17 B 418 THR PHE ARG ASP VAL ASN ILE ALA LEU ALA ASN GLU PHE SEQRES 18 B 418 ALA LEU LEU ALA HIS GLN TYR GLY VAL ASN VAL TYR GLU SEQRES 19 B 418 ALA ILE GLU LEU ALA ASN THR HIS PRO ARG VAL LYS ILE SEQRES 20 B 418 HIS THR PRO GLY ILE GLY VAL GLY GLY HIS CYS LEU PRO SEQRES 21 B 418 LYS ASP PRO TYR LEU LEU LEU SER ASN ALA LYS GLU ASP SEQRES 22 B 418 PHE GLY LEU ILE ARG ILE ALA ARG ARG ILE ASN GLU ARG SEQRES 23 B 418 MSE PRO ALA PHE ALA ALA GLY LEU LEU PHE GLU ALA LEU SEQRES 24 B 418 GLU LYS ALA ASN ILE LYS PRO SER GLU ALA ILE ILE ALA SEQRES 25 B 418 VAL LEU GLY LEU ALA TYR LYS GLY GLY THR ASP ASP THR SEQRES 26 B 418 ARG ASN SER PRO ALA LEU LYS PHE VAL GLU ILE ILE ARG SEQRES 27 B 418 ASN SER VAL LYS GLU VAL ARG THR TYR ASP PRO TYR VAL SEQRES 28 B 418 ARG GLY THR HIS ASP SER LEU GLU LYS VAL VAL GLU GLY SEQRES 29 B 418 ALA ASP ALA ILE VAL ILE ALA THR ASP HIS PRO GLU PHE SEQRES 30 B 418 LYS SER VAL ASN TRP GLU SER ILE GLY LYS SER MSE ARG SEQRES 31 B 418 HIS LYS ILE ILE ILE ASP GLY ARG ASN ILE ILE LYS GLU SEQRES 32 B 418 PRO PRO VAL GLY PHE ILE PHE ARG GLY ILE GLY ARG GLY SEQRES 33 B 418 ASP VAL MODRES 4R16 MSE A 1 MET SELENOMETHIONINE MODRES 4R16 MSE A 18 MET SELENOMETHIONINE MODRES 4R16 MSE A 108 MET SELENOMETHIONINE MODRES 4R16 MSE A 128 MET SELENOMETHIONINE MODRES 4R16 MSE A 154 MET SELENOMETHIONINE MODRES 4R16 MSE A 202 MET SELENOMETHIONINE MODRES 4R16 MSE A 206 MET SELENOMETHIONINE MODRES 4R16 MSE A 287 MET SELENOMETHIONINE MODRES 4R16 MSE A 389 MET SELENOMETHIONINE MODRES 4R16 MSE B 1 MET SELENOMETHIONINE MODRES 4R16 MSE B 18 MET SELENOMETHIONINE MODRES 4R16 MSE B 108 MET SELENOMETHIONINE MODRES 4R16 MSE B 128 MET SELENOMETHIONINE MODRES 4R16 MSE B 154 MET SELENOMETHIONINE MODRES 4R16 MSE B 202 MET SELENOMETHIONINE MODRES 4R16 MSE B 206 MET SELENOMETHIONINE MODRES 4R16 MSE B 287 MET SELENOMETHIONINE MODRES 4R16 MSE B 389 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 18 8 HET MSE A 108 8 HET MSE A 128 8 HET MSE A 154 8 HET MSE A 202 8 HET MSE A 206 8 HET MSE A 287 8 HET MSE A 389 8 HET MSE B 1 8 HET MSE B 18 8 HET MSE B 108 8 HET MSE B 128 8 HET MSE B 154 8 HET MSE B 202 8 HET MSE B 206 8 HET MSE B 287 8 HET MSE B 389 8 HET SAJ A 501 40 HET SAJ B 501 40 HETNAM MSE SELENOMETHIONINE HETNAM SAJ (2S,3S,4R,5S,6R)-5-ACETAMIDO-6-[[[(2R,3S,4R,5R)-5-[2,4- HETNAM 2 SAJ BIS(OXIDANYLIDENE)PYRIMIDIN-1-YL]-3,4-BIS(OXIDANYL) HETNAM 3 SAJ OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL]OXY-OXIDANYL- HETNAM 4 SAJ PHOSPHORYL]OXY-3,4-BIS(OXIDANYL)OXANE-2-CARBOXYLIC HETNAM 5 SAJ ACID FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 SAJ 2(C17 H25 N3 O18 P2) FORMUL 5 HOH *1012(H2 O) HELIX 1 1 ILE A 11 SER A 21 1 11 HELIX 2 2 ARG A 32 SER A 41 1 10 HELIX 3 3 GLU A 50 LEU A 61 1 12 HELIX 4 4 ARG A 69 LYS A 74 5 6 HELIX 5 5 LEU A 94 MSE A 108 1 15 HELIX 6 6 GLY A 123 GLY A 137 1 15 HELIX 7 7 ARG A 157 ASN A 165 1 9 HELIX 8 8 SER A 173 ARG A 185 1 13 HELIX 9 9 ALA A 197 GLY A 229 1 33 HELIX 10 10 ASN A 231 ASN A 240 1 10 HELIX 11 11 LYS A 261 SER A 268 1 8 HELIX 12 12 GLY A 275 ARG A 286 1 12 HELIX 13 13 ARG A 286 ALA A 302 1 17 HELIX 14 14 LYS A 305 GLU A 308 5 4 HELIX 15 15 SER A 328 ARG A 338 1 11 HELIX 16 16 SER A 357 GLU A 363 1 7 HELIX 17 17 HIS A 374 VAL A 380 5 7 HELIX 18 18 ASN A 381 SER A 388 1 8 HELIX 19 19 ILE B 11 SER B 21 1 11 HELIX 20 20 ARG B 32 ASN B 40 1 9 HELIX 21 21 GLU B 50 LEU B 61 1 12 HELIX 22 22 ARG B 69 LYS B 74 5 6 HELIX 23 23 LEU B 94 MSE B 108 1 15 HELIX 24 24 GLY B 123 GLY B 137 1 15 HELIX 25 25 ARG B 157 ASN B 165 1 9 HELIX 26 26 SER B 173 ARG B 185 1 13 HELIX 27 27 ALA B 197 GLY B 229 1 33 HELIX 28 28 ASN B 231 ASN B 240 1 10 HELIX 29 29 LYS B 261 SER B 268 1 8 HELIX 30 30 GLY B 275 ARG B 286 1 12 HELIX 31 31 ARG B 286 ALA B 302 1 17 HELIX 32 32 LYS B 305 GLU B 308 5 4 HELIX 33 33 SER B 328 ARG B 338 1 11 HELIX 34 34 ASN B 339 VAL B 341 5 3 HELIX 35 35 SER B 357 GLU B 363 1 7 HELIX 36 36 HIS B 374 VAL B 380 5 7 HELIX 37 37 ASN B 381 GLY B 386 1 6 HELIX 38 38 LYS B 387 MSE B 389 5 3 SHEET 1 A 8 LEU A 64 THR A 67 0 SHEET 2 A 8 ASP A 25 TYR A 29 1 N GLY A 28 O LYS A 65 SHEET 3 A 8 ARG A 2 LEU A 6 1 N VAL A 5 O TYR A 29 SHEET 4 A 8 VAL A 78 ILE A 81 1 O ILE A 80 N ALA A 4 SHEET 5 A 8 LEU A 113 ILE A 116 1 O ILE A 115 N PHE A 79 SHEET 6 A 8 TYR A 145 HIS A 148 1 O TYR A 145 N VAL A 114 SHEET 7 A 8 ARG A 167 GLY A 171 -1 O GLY A 170 N HIS A 148 SHEET 8 A 8 ILE A 192 ASN A 196 1 O PHE A 193 N ILE A 169 SHEET 1 B 2 LEU A 87 SER A 88 0 SHEET 2 B 2 ASP A 91 PRO A 92 -1 O ASP A 91 N SER A 88 SHEET 1 C 5 GLU A 343 TYR A 347 0 SHEET 2 C 5 ILE A 310 LEU A 314 1 N ILE A 311 O ARG A 345 SHEET 3 C 5 ALA A 367 ILE A 370 1 O VAL A 369 N LEU A 314 SHEET 4 C 5 ILE A 393 ASP A 396 1 O ILE A 395 N ILE A 370 SHEET 5 C 5 ILE A 409 GLY A 412 1 O ARG A 411 N ASP A 396 SHEET 1 D 8 LEU B 64 THR B 67 0 SHEET 2 D 8 ASP B 25 TYR B 29 1 N GLY B 28 O LYS B 65 SHEET 3 D 8 ARG B 2 LEU B 6 1 N VAL B 5 O TYR B 29 SHEET 4 D 8 VAL B 78 ILE B 81 1 O ILE B 80 N ALA B 4 SHEET 5 D 8 LEU B 113 ILE B 116 1 O ILE B 115 N PHE B 79 SHEET 6 D 8 TYR B 145 HIS B 148 1 O TYR B 145 N VAL B 114 SHEET 7 D 8 ARG B 167 GLY B 171 -1 O GLY B 170 N HIS B 148 SHEET 8 D 8 ILE B 192 ASN B 196 1 O PHE B 193 N ARG B 167 SHEET 1 E 2 LEU B 87 SER B 88 0 SHEET 2 E 2 ASP B 91 PRO B 92 -1 O ASP B 91 N SER B 88 SHEET 1 F 5 GLU B 343 TYR B 347 0 SHEET 2 F 5 ILE B 310 LEU B 314 1 N ILE B 311 O ARG B 345 SHEET 3 F 5 ALA B 367 ILE B 370 1 O ALA B 367 N ALA B 312 SHEET 4 F 5 ILE B 393 ASP B 396 1 O ILE B 395 N ILE B 368 SHEET 5 F 5 ILE B 409 GLY B 412 1 O ARG B 411 N ASP B 396 LINK C MSE A 1 N ARG A 2 1555 1555 1.33 LINK C ILE A 17 N MSE A 18 1555 1555 1.33 LINK C MSE A 18 N PHE A 19 1555 1555 1.33 LINK C VAL A 107 N MSE A 108 1555 1555 1.33 LINK C MSE A 108 N ASP A 109 1555 1555 1.33 LINK C LYS A 127 N MSE A 128 1555 1555 1.33 LINK C MSE A 128 N ALA A 129 1555 1555 1.33 LINK C VAL A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N PRO A 155 1555 1555 1.34 LINK C GLU A 201 N MSE A 202 1555 1555 1.33 LINK C MSE A 202 N VAL A 203 1555 1555 1.33 LINK C LEU A 205 N MSE A 206 1555 1555 1.33 LINK C MSE A 206 N GLU A 207 1555 1555 1.33 LINK C ARG A 286 N MSE A 287 1555 1555 1.33 LINK C MSE A 287 N PRO A 288 1555 1555 1.35 LINK C SER A 388 N MSE A 389 1555 1555 1.33 LINK C MSE A 389 N ARG A 390 1555 1555 1.33 LINK C MSE B 1 N ARG B 2 1555 1555 1.33 LINK C ILE B 17 N MSE B 18 1555 1555 1.33 LINK C MSE B 18 N PHE B 19 1555 1555 1.33 LINK C VAL B 107 N MSE B 108 1555 1555 1.33 LINK C MSE B 108 N ASP B 109 1555 1555 1.33 LINK C LYS B 127 N MSE B 128 1555 1555 1.33 LINK C MSE B 128 N ALA B 129 1555 1555 1.33 LINK C VAL B 153 N MSE B 154 1555 1555 1.33 LINK C MSE B 154 N PRO B 155 1555 1555 1.35 LINK C GLU B 201 N MSE B 202 1555 1555 1.33 LINK C MSE B 202 N VAL B 203 1555 1555 1.33 LINK C LEU B 205 N MSE B 206 1555 1555 1.33 LINK C MSE B 206 N GLU B 207 1555 1555 1.33 LINK C ARG B 286 N MSE B 287 1555 1555 1.33 LINK C MSE B 287 N PRO B 288 1555 1555 1.35 LINK C SER B 388 N MSE B 389 1555 1555 1.33 LINK C MSE B 389 N ARG B 390 1555 1555 1.33 SITE 1 AC1 33 ILE A 11 ARG A 152 VAL A 153 MSE A 154 SITE 2 AC1 33 PRO A 155 LYS A 204 GLU A 207 ASN A 208 SITE 3 AC1 33 ARG A 211 ILE A 215 HIS A 248 THR A 249 SITE 4 AC1 33 GLY A 253 VAL A 254 GLY A 255 CYS A 258 SITE 5 AC1 33 LEU A 259 TYR A 318 LYS A 319 ARG A 398 SITE 6 AC1 33 HOH A 604 HOH A 607 HOH A 617 HOH A 683 SITE 7 AC1 33 HOH A 816 HOH A 901 HOH A 968 HOH A 969 SITE 8 AC1 33 HOH A 970 HOH A 978 HIS B 242 ARG B 244 SITE 9 AC1 33 VAL B 245 SITE 1 AC2 31 HIS A 242 ARG A 244 ARG B 152 VAL B 153 SITE 2 AC2 31 MSE B 154 PRO B 155 LYS B 204 GLU B 207 SITE 3 AC2 31 ASN B 208 ARG B 211 ILE B 215 HIS B 248 SITE 4 AC2 31 THR B 249 GLY B 253 VAL B 254 GLY B 255 SITE 5 AC2 31 CYS B 258 LEU B 259 TYR B 318 LYS B 319 SITE 6 AC2 31 ARG B 398 HOH B 601 HOH B 631 HOH B 647 SITE 7 AC2 31 HOH B 671 HOH B 698 HOH B 716 HOH B 903 SITE 8 AC2 31 HOH B 914 HOH B 977 HOH B 978 CRYST1 54.030 74.650 73.560 66.20 70.40 75.20 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018508 -0.004890 -0.005212 0.00000 SCALE2 0.000000 0.013856 -0.005160 0.00000 SCALE3 0.000000 0.000000 0.015399 0.00000 HETATM 1 N MSE A 1 -48.922 -12.482 2.815 1.00 27.62 N HETATM 2 CA MSE A 1 -47.668 -13.182 2.415 1.00 27.65 C HETATM 3 C MSE A 1 -47.228 -14.108 3.544 1.00 26.96 C HETATM 4 O MSE A 1 -47.404 -13.795 4.722 1.00 24.97 O HETATM 5 CB MSE A 1 -46.566 -12.162 2.122 1.00 30.08 C HETATM 6 CG MSE A 1 -45.299 -12.763 1.537 1.00 33.22 C HETATM 7 SE MSE A 1 -43.901 -11.454 1.296 1.00 38.02 SE HETATM 8 CE MSE A 1 -44.700 -10.430 -0.130 1.00 34.85 C