HEADER METAL BINDING PROTEIN, UNKNOWN FUNCTION 12-AUG-14 4R2J TITLE CRYSTAL STRUCTURE OF YDAA (UNIVERSAL STRESS PROTEIN E) FROM SALMONELLA TITLE 2 TYPHIMURIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNIVERSAL STRESS PROTEIN E; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM STR. LT2; SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: STM1661, USPE, YDAA USPE STM1661; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PRSET C KEYWDS UNIVERSAL STRESS PROTEIN, HUP DOMAIN, INTERNAL SYMMETRY, STRESS KEYWDS 2 TOLERANCE, ATP BINDING, METAL BINDING PROTEIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.BANGERA,M.R.N.MURTHY REVDAT 4 08-NOV-23 4R2J 1 REMARK REVDAT 3 24-AUG-22 4R2J 1 JRNL HETSYN REVDAT 2 29-JUL-20 4R2J 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE REVDAT 1 04-FEB-15 4R2J 0 JRNL AUTH M.BANGERA,R.PANIGRAHI,S.R.SAGURTHI,H.S.SAVITHRI,M.R.MURTHY JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF TWO UNIVERSAL STRESS JRNL TITL 2 PROTEINS YDAA AND YNAF FROM SALMONELLA TYPHIMURIUM: POSSIBLE JRNL TITL 3 ROLES IN MICROBIAL STRESS TOLERANCE. JRNL REF J.STRUCT.BIOL. V. 189 238 2015 JRNL REFN ESSN 1095-8657 JRNL PMID 25600413 JRNL DOI 10.1016/J.JSB.2015.01.003 REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 667 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.36 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 913 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2115 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.15000 REMARK 3 B22 (A**2) : 1.15000 REMARK 3 B33 (A**2) : -3.72000 REMARK 3 B12 (A**2) : 0.57000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.370 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.259 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.235 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.386 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2192 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3001 ; 1.734 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 280 ; 6.673 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;38.784 ;24.588 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 311 ;17.712 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;18.201 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 364 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1628 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1135 ; 2.678 ; 3.962 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1410 ; 3.951 ; 5.923 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1057 ; 3.876 ; 4.238 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3270 ; 7.263 ;34.251 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 303 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4050 16.4740 6.1610 REMARK 3 T TENSOR REMARK 3 T11: 0.0991 T22: 0.0267 REMARK 3 T33: 0.0689 T12: 0.0238 REMARK 3 T13: -0.0514 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.4166 L22: 2.1973 REMARK 3 L33: 6.5914 L12: -0.4553 REMARK 3 L13: -0.6366 L23: 0.4860 REMARK 3 S TENSOR REMARK 3 S11: 0.0708 S12: -0.0436 S13: -0.0478 REMARK 3 S21: -0.0941 S22: -0.0055 S23: 0.0883 REMARK 3 S31: 0.3938 S32: 0.0236 S33: -0.0653 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4R2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086817. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : SI(111) MONOCHROMATOR REMARK 200 OPTICS : BENT COLLIMATING MIRROR AND REMARK 200 TOROID REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13536 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 42.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11900 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.64200 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ID 3OLQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM NITRATE HEXAHYDRATE, REMARK 280 20% PEG 3350, 10MM ADENOSINE 5'-(BETA,GAMMA-IMIDO)TRIPHOSPHATE, REMARK 280 0.2% N-DODECYL BETA-D-MALTOSIDE, PH 5.8, UNDER OIL, MICROBATCH, REMARK 280 TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.99700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.99400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.99400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.99700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 ARG A -12 REMARK 465 GLY A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 GLY A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 49 REMARK 465 SER A 164 REMARK 465 GLU A 165 REMARK 465 GLU A 166 REMARK 465 LEU A 209 REMARK 465 PRO A 210 REMARK 465 GLU A 211 REMARK 465 PHE A 212 REMARK 465 ASP A 213 REMARK 465 GLY A 272 REMARK 465 ARG A 273 REMARK 465 THR A 274 REMARK 465 GLY A 275 REMARK 465 LEU A 276 REMARK 465 SER A 277 REMARK 465 ALA A 278 REMARK 465 TYR A 304 REMARK 465 GLN A 305 REMARK 465 THR A 306 REMARK 465 PRO A 307 REMARK 465 VAL A 308 REMARK 465 GLU A 309 REMARK 465 LEU A 310 REMARK 465 ASP A 311 REMARK 465 ASP A 312 REMARK 465 GLU A 313 REMARK 465 ASP A 314 REMARK 465 ASP A 315 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 3 CG SD CE REMARK 470 GLN A 5 CG CD OE1 NE2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 PHE A 44 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 45 OG REMARK 470 MET A 48 CG SD CE REMARK 470 THR A 50 OG1 CG2 REMARK 470 LEU A 51 CG CD1 CD2 REMARK 470 LEU A 52 CG CD1 CD2 REMARK 470 SER A 53 OG REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 ARG A 57 CZ NH1 NH2 REMARK 470 SER A 66 OG REMARK 470 ARG A 68 CD NE CZ NH1 NH2 REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 LYS A 77 CD CE NZ REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 LYS A 89 CE NZ REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 137 CE NZ REMARK 470 GLU A 152 CG CD OE1 OE2 REMARK 470 LYS A 155 CE NZ REMARK 470 TYR A 168 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 169 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 170 CG OD1 ND2 REMARK 470 LEU A 172 CG CD1 CD2 REMARK 470 GLU A 174 CG CD OE1 OE2 REMARK 470 LYS A 178 CD CE NZ REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 GLN A 182 CG CD OE1 NE2 REMARK 470 ASN A 188 CG OD1 ND2 REMARK 470 VAL A 200 CG1 CG2 REMARK 470 THR A 201 OG1 CG2 REMARK 470 ASN A 204 CG OD1 ND2 REMARK 470 ILE A 205 CD1 REMARK 470 ILE A 207 CD1 REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 SER A 215 OG REMARK 470 VAL A 216 CG1 CG2 REMARK 470 TYR A 217 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 SER A 237 OG REMARK 470 GLU A 240 CG CD OE1 OE2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 LYS A 247 CE NZ REMARK 470 GLU A 259 CD OE1 OE2 REMARK 470 HIS A 260 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 284 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 6 74.67 -151.82 REMARK 500 SER A 45 -6.26 -55.07 REMARK 500 HIS A 93 139.11 -170.86 REMARK 500 SER A 108 69.07 26.09 REMARK 500 TYR A 168 -4.36 -146.49 REMARK 500 ALA A 206 -59.80 -28.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 117 NE2 REMARK 620 2 HIS A 119 ND1 133.1 REMARK 620 3 GLC A 404 O3 105.4 109.5 REMARK 620 4 GLC A 404 O4 85.2 73.8 76.5 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4R2K RELATED DB: PDB REMARK 900 RELATED ID: 4R2L RELATED DB: PDB REMARK 900 RELATED ID: 4R2M RELATED DB: PDB DBREF 4R2J A 1 315 UNP Q8ZP84 USPE_SALTY 1 315 SEQADV 4R2J MET A -13 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J ARG A -12 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J GLY A -11 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J SER A -10 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J HIS A -9 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J HIS A -8 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J HIS A -7 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J HIS A -6 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J HIS A -5 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J HIS A -4 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J GLY A -3 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J MET A -2 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J ALA A -1 UNP Q8ZP84 EXPRESSION TAG SEQADV 4R2J SER A 0 UNP Q8ZP84 EXPRESSION TAG SEQRES 1 A 329 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 329 SER MET ALA MET TYR GLN ASN MET LEU VAL VAL ILE ASP SEQRES 3 A 329 PRO ASN GLN ASP ASP GLN PRO ALA LEU ARG ARG ALA VAL SEQRES 4 A 329 TYR LEU HIS GLN ARG ILE GLY GLY LYS ILE LYS ALA PHE SEQRES 5 A 329 LEU PRO ILE TYR ASP PHE SER TYR GLU MET THR THR LEU SEQRES 6 A 329 LEU SER PRO ASP GLU ARG THR ALA MET ARG GLN GLY VAL SEQRES 7 A 329 ILE SER GLN ARG THR ALA TRP ILE ARG GLU GLN ALA LYS SEQRES 8 A 329 TYR TYR LEU GLU ALA GLY VAL PRO ILE GLU ILE LYS VAL SEQRES 9 A 329 VAL TRP HIS ASN ARG PRO PHE GLU ALA ILE ILE GLN GLU SEQRES 10 A 329 VAL ILE ALA GLY SER HIS ASP LEU VAL LEU LYS MET ALA SEQRES 11 A 329 HIS GLN HIS ASP ARG LEU GLU ALA VAL ILE PHE THR PRO SEQRES 12 A 329 THR ASP TRP HIS LEU LEU ARG LYS CYS PRO SER PRO VAL SEQRES 13 A 329 TRP MET VAL LYS ASP GLN PRO TRP PRO GLU GLY GLY LYS SEQRES 14 A 329 ALA LEU VAL ALA VAL ASN LEU ALA SER GLU GLU PRO TYR SEQRES 15 A 329 HIS ASN ALA LEU ASN GLU LYS LEU VAL LYS GLU THR LEU SEQRES 16 A 329 GLN LEU ALA GLU GLN VAL ASN HIS THR GLU VAL HIS LEU SEQRES 17 A 329 VAL GLY ALA TYR PRO VAL THR PRO ILE ASN ILE ALA ILE SEQRES 18 A 329 GLU LEU PRO GLU PHE ASP PRO SER VAL TYR ASN ASP ALA SEQRES 19 A 329 ILE ARG GLY GLN HIS LEU LEU ALA MET LYS ALA LEU ARG SEQRES 20 A 329 GLN LYS PHE SER ILE ASP GLU LYS VAL THR HIS VAL GLU SEQRES 21 A 329 LYS GLY LEU PRO GLU GLU VAL ILE PRO ASP LEU ALA GLU SEQRES 22 A 329 HIS LEU GLN ALA GLY ILE VAL VAL LEU GLY THR VAL GLY SEQRES 23 A 329 ARG THR GLY LEU SER ALA ALA PHE LEU GLY ASN THR ALA SEQRES 24 A 329 GLU GLN VAL ILE ASP HIS LEU ARG CYS ASP LEU LEU VAL SEQRES 25 A 329 ILE LYS PRO ASP GLU TYR GLN THR PRO VAL GLU LEU ASP SEQRES 26 A 329 ASP GLU ASP ASP HET ZN A 401 1 HET PO4 A 402 5 HET EDO A 403 4 HET GLC A 404 12 HET GLC A 405 12 HETNAM ZN ZINC ION HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETSYN EDO ETHYLENE GLYCOL HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 ZN ZN 2+ FORMUL 3 PO4 O4 P 3- FORMUL 4 EDO C2 H6 O2 FORMUL 5 GLC 2(C6 H12 O6) FORMUL 7 HOH *34(H2 O) HELIX 1 1 GLN A 18 GLY A 32 1 15 HELIX 2 2 ASP A 43 GLU A 47 5 5 HELIX 3 3 SER A 53 ALA A 82 1 30 HELIX 4 4 ARG A 95 GLY A 107 1 13 HELIX 5 5 THR A 128 CYS A 138 1 11 HELIX 6 6 TYR A 168 VAL A 187 1 20 HELIX 7 7 PRO A 202 ILE A 207 1 6 HELIX 8 8 SER A 215 PHE A 236 1 22 HELIX 9 9 ASP A 239 LYS A 241 5 3 HELIX 10 10 LEU A 249 GLN A 262 1 14 HELIX 11 11 GLY A 282 ASP A 290 1 9 SHEET 1 A10 ILE A 86 TRP A 92 0 SHEET 2 A10 LYS A 34 ILE A 41 1 N ILE A 41 O VAL A 91 SHEET 3 A10 ASN A 6 VAL A 10 1 N VAL A 9 O PHE A 38 SHEET 4 A10 LEU A 111 ALA A 116 1 O LEU A 111 N LEU A 8 SHEET 5 A10 VAL A 142 LYS A 146 1 O TRP A 143 N VAL A 112 SHEET 6 A10 ASP A 295 ILE A 299 -1 O LEU A 296 N MET A 144 SHEET 7 A10 ALA A 263 GLY A 269 1 N LEU A 268 O LEU A 297 SHEET 8 A10 LYS A 155 ALA A 159 1 N LEU A 157 O VAL A 267 SHEET 9 A10 VAL A 192 TYR A 198 1 O HIS A 193 N ALA A 156 SHEET 10 A10 THR A 243 LYS A 247 1 O GLU A 246 N TYR A 198 LINK NE2 HIS A 117 ZN ZN A 401 1555 1555 2.20 LINK ND1 HIS A 119 ZN ZN A 401 1555 1555 2.01 LINK ZN ZN A 401 O3 GLC A 404 1555 1555 2.42 LINK ZN ZN A 401 O4 GLC A 404 1555 1555 2.45 CRYST1 85.770 85.770 74.991 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011659 0.006731 0.000000 0.00000 SCALE2 0.000000 0.013463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013335 0.00000