HEADER TRANSCRIPTION 25-AUG-14 4R6I TITLE ATXA PROTEIN, A VIRULENCE REGULATOR FROM BACILLUS ANTHRACIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTHRAX TOXIN EXPRESSION TRANS-ACTING POSITIVE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_COMMON: ANTHRAX,ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 261594; SOURCE 5 STRAIN: AMES ANCESTOR; SOURCE 6 GENE: ATXA, BXA0146, GBAA_PXO1_0146, PXO1-119; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, IDP01169, ATXA, TRANSCRIPTIONAL ACTIVATOR, KEYWDS 2 VIRULENCE REGULATOR, DNA BINDING, NIAID, NATIONAL INSTITUTE OF KEYWDS 3 ALLERGY AND INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 4 INFECTIOUS DISEASES, CSGID, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,L.B.HORTON,T.M.KOEHLER,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 22-NOV-17 4R6I 1 REMARK REVDAT 3 11-FEB-15 4R6I 1 JRNL REVDAT 2 03-DEC-14 4R6I 1 JRNL REVDAT 1 22-OCT-14 4R6I 0 JRNL AUTH T.G.HAMMERSTROM,L.B.HORTON,M.C.SWICK,A.JOACHIMIAK,J.OSIPIUK, JRNL AUTH 2 T.M.KOEHLER JRNL TITL CRYSTAL STRUCTURE OF BACILLUS ANTHRACIS VIRULENCE REGULATOR JRNL TITL 2 ATXA AND EFFECTS OF PHOSPHORYLATED HISTIDINES ON JRNL TITL 3 MULTIMERIZATION AND ACTIVITY. JRNL REF MOL.MICROBIOL. V. 95 426 2015 JRNL REFN ISSN 0950-382X JRNL PMID 25402841 JRNL DOI 10.1111/MMI.12867 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 43986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2344 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3155 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 177 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7598 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 70 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 78.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.30000 REMARK 3 B22 (A**2) : -39.35000 REMARK 3 B33 (A**2) : 31.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.087 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.061 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.178 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.288 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7875 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7865 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10632 ; 1.434 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 18134 ; 0.779 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 919 ; 6.082 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 355 ;40.122 ;24.986 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1475 ;16.974 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;19.734 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1245 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8529 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1765 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3682 ; 4.552 ; 6.817 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3681 ; 4.533 ; 6.816 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4593 ; 6.621 ;10.220 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): 52.6645 49.6613 25.0290 REMARK 3 T TENSOR REMARK 3 T11: 0.0862 T22: 0.1344 REMARK 3 T33: 0.0243 T12: -0.0114 REMARK 3 T13: 0.0284 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.1501 L22: 0.2520 REMARK 3 L33: 0.5554 L12: -0.0646 REMARK 3 L13: 0.1346 L23: -0.3604 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: -0.0136 S13: -0.0281 REMARK 3 S21: -0.0653 S22: -0.0347 S23: -0.0527 REMARK 3 S31: 0.0650 S32: -0.0004 S33: 0.0588 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 601 REMARK 3 ORIGIN FOR THE GROUP (A): 33.0476 18.2134 28.2087 REMARK 3 T TENSOR REMARK 3 T11: 0.1508 T22: 0.1287 REMARK 3 T33: 0.0564 T12: -0.0861 REMARK 3 T13: -0.0520 T23: 0.0842 REMARK 3 L TENSOR REMARK 3 L11: 0.1845 L22: 0.3211 REMARK 3 L33: 0.6197 L12: -0.0365 REMARK 3 L13: -0.2300 L23: 0.2431 REMARK 3 S TENSOR REMARK 3 S11: 0.0120 S12: -0.0312 S13: -0.0325 REMARK 3 S21: -0.1854 S22: 0.0371 S23: 0.0210 REMARK 3 S31: -0.0369 S32: -0.1007 S33: -0.0491 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4R6I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000086960. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46330 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 46.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.89400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.170 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3 M NACL, 0.1 M BIS-TRIS BUFFER, 0.2% REMARK 280 N-DODECYL-BETA-D-MALTOSIDE, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 65.23000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.58350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 90.45400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 65.23000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.58350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 90.45400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 65.23000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.58350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 90.45400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 65.23000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 67.58350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.45400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 THR A 273 REMARK 465 THR A 274 REMARK 465 ASP A 275 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 THR B 274 REMARK 465 ASP B 275 REMARK 465 SER B 276 REMARK 465 ILE B 428 REMARK 465 ASN B 429 REMARK 465 LEU B 430 REMARK 465 THR B 431 REMARK 465 ASN B 432 REMARK 465 GLU B 433 REMARK 465 SER B 434 REMARK 465 LEU B 435 REMARK 465 GLN B 436 REMARK 465 VAL B 447 REMARK 465 ASN B 448 REMARK 465 LEU B 449 REMARK 465 PRO B 450 REMARK 465 ILE B 451 REMARK 465 LYS B 452 REMARK 465 ASN B 453 REMARK 465 ILE B 454 REMARK 465 PRO B 455 REMARK 465 ILE B 456 REMARK 465 VAL B 457 REMARK 465 GLN B 458 REMARK 465 ILE B 459 REMARK 465 SER B 460 REMARK 465 ILE B 474 REMARK 465 ILE B 475 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 25 67.65 -104.18 REMARK 500 ILE A 55 133.80 -36.76 REMARK 500 ASN A 220 117.16 -167.95 REMARK 500 ASN A 417 -122.17 47.46 REMARK 500 LYS A 452 -76.72 -104.41 REMARK 500 ASN A 453 51.82 -93.95 REMARK 500 GLN B 64 101.04 -59.47 REMARK 500 ASN B 190 71.93 40.53 REMARK 500 LYS B 229 -8.16 -58.79 REMARK 500 HIS B 346 54.28 -153.59 REMARK 500 LEU B 386 -72.43 -62.84 REMARK 500 PHE B 387 -47.38 -29.19 REMARK 500 SER B 399 31.49 -90.43 REMARK 500 ASN B 417 -120.19 68.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP01169 RELATED DB: TARGETTRACK DBREF 4R6I A 1 475 UNP Q44636 ATXA_BACAN 1 475 DBREF 4R6I B 1 475 UNP Q44636 ATXA_BACAN 1 475 SEQADV 4R6I SER A -2 UNP Q44636 EXPRESSION TAG SEQADV 4R6I ASN A -1 UNP Q44636 EXPRESSION TAG SEQADV 4R6I ALA A 0 UNP Q44636 EXPRESSION TAG SEQADV 4R6I SER B -2 UNP Q44636 EXPRESSION TAG SEQADV 4R6I ASN B -1 UNP Q44636 EXPRESSION TAG SEQADV 4R6I ALA B 0 UNP Q44636 EXPRESSION TAG SEQRES 1 A 478 SER ASN ALA MSE LEU THR PRO ILE SER ILE GLU LYS GLU SEQRES 2 A 478 HIS ILE ARG LEU ILE ASN LEU LEU HIS PHE ILE ASN GLU SEQRES 3 A 478 GLN ASN ARG TRP PHE THR ILE LYS GLU LEU SER ASP TYR SEQRES 4 A 478 LEU GLN VAL ALA ASP LYS THR VAL ARG LYS TYR LEU LYS SEQRES 5 A 478 LEU LEU GLU ASP GLU ILE PRO PRO SER TRP ASN LEU LEU SEQRES 6 A 478 VAL GLN LYS GLY LYS GLY ILE TYR LEU LYS LYS PRO LEU SEQRES 7 A 478 ASN GLU SER LEU SER PHE VAL GLU SER LYS ILE LEU ARG SEQRES 8 A 478 LYS SER LEU ASN LEU GLN ILE CYS GLU GLU LEU VAL PHE SEQRES 9 A 478 LYS LYS ASN SER MSE GLN SER LEU ALA GLN LYS LEU HIS SEQRES 10 A 478 LEU GLN VAL GLY ALA LEU TYR PRO ILE ILE ASN GLN ILE SEQRES 11 A 478 ASN TYR ASP ILE GLN SER SER HIS LEU ASN ILE LYS LYS SEQRES 12 A 478 LYS PRO LEU GLU ILE SER GLY ARG GLU GLN ASP VAL ARG SEQRES 13 A 478 VAL PHE MSE LEU ARG LEU TYR CYS ASN ILE PRO ASN ASP SEQRES 14 A 478 TYR TRP PRO PHE PRO TYR ILE ASN LYS GLN ASN ILE THR SEQRES 15 A 478 ASP LEU ILE ASN LYS MSE GLU LYS ILE LEU ASN VAL GLN SEQRES 16 A 478 MSE TYR THR TYR SER LYS HIS LYS LEU CYS VAL LEU PHE SEQRES 17 A 478 ALA ILE THR ILE SER ARG LEU LEU SER GLY ASN THR ILE SEQRES 18 A 478 ASP ASN VAL SER GLY LEU ILE LEU VAL ASN LYS ASN ASP SEQRES 19 A 478 ASP HIS TYR LYS THR VAL ALA SER ILE THR SER GLU LEU SEQRES 20 A 478 GLN ASN SER PHE GLY VAL THR LEU HIS GLU THR GLU ILE SEQRES 21 A 478 SER PHE LEU ALA LEU ALA LEU LEU LEU SER LEU GLY ASN SEQRES 22 A 478 SER ILE THR THR ASP SER ASN LYS THR LEU THR SER TYR SEQRES 23 A 478 LYS LYS THR ILE MSE PRO LEU ALA LYS GLU ILE THR LYS SEQRES 24 A 478 GLY ILE GLU HIS LYS LEU GLN LEU GLY ILE ASN TYR ASP SEQRES 25 A 478 GLU SER PHE LEU THR TYR VAL VAL LEU ILE ILE LYS LYS SEQRES 26 A 478 ALA LEU ASP LYS ASN PHE ILE GLN TYR TYR ASN TYR ASN SEQRES 27 A 478 ILE LYS PHE ILE ARG HIS ILE LYS GLN ARG HIS PRO ASN SEQRES 28 A 478 THR PHE ASN THR ILE GLN GLU CYS ILE SER ASN LEU ASN SEQRES 29 A 478 TYR THR VAL TYR SER HIS PHE ASP CYS TYR GLU ILE SER SEQRES 30 A 478 LEU LEU THR MSE HIS PHE GLU THR GLN ARG MSE LEU PHE SEQRES 31 A 478 LYS ASN ASN PRO LYS LYS ILE TYR VAL TYR THR SER GLN SEQRES 32 A 478 GLY CYS ILE HIS ARG GLU TYR ILE SER ALA LEU LEU GLU SEQRES 33 A 478 LYS ARG TYR ASN GLY LEU ILE LYS ILE VAL ARG ASN THR SEQRES 34 A 478 ILE ILE ASN LEU THR ASN GLU SER LEU GLN ASP MSE GLU SEQRES 35 A 478 ILE ASP ILE ILE ILE SER ASN VAL ASN LEU PRO ILE LYS SEQRES 36 A 478 ASN ILE PRO ILE VAL GLN ILE SER GLU PHE PRO THR GLU SEQRES 37 A 478 ARG ASP PHE HIS GLU ILE LYS LYS ILE ILE SEQRES 1 B 478 SER ASN ALA MSE LEU THR PRO ILE SER ILE GLU LYS GLU SEQRES 2 B 478 HIS ILE ARG LEU ILE ASN LEU LEU HIS PHE ILE ASN GLU SEQRES 3 B 478 GLN ASN ARG TRP PHE THR ILE LYS GLU LEU SER ASP TYR SEQRES 4 B 478 LEU GLN VAL ALA ASP LYS THR VAL ARG LYS TYR LEU LYS SEQRES 5 B 478 LEU LEU GLU ASP GLU ILE PRO PRO SER TRP ASN LEU LEU SEQRES 6 B 478 VAL GLN LYS GLY LYS GLY ILE TYR LEU LYS LYS PRO LEU SEQRES 7 B 478 ASN GLU SER LEU SER PHE VAL GLU SER LYS ILE LEU ARG SEQRES 8 B 478 LYS SER LEU ASN LEU GLN ILE CYS GLU GLU LEU VAL PHE SEQRES 9 B 478 LYS LYS ASN SER MSE GLN SER LEU ALA GLN LYS LEU HIS SEQRES 10 B 478 LEU GLN VAL GLY ALA LEU TYR PRO ILE ILE ASN GLN ILE SEQRES 11 B 478 ASN TYR ASP ILE GLN SER SER HIS LEU ASN ILE LYS LYS SEQRES 12 B 478 LYS PRO LEU GLU ILE SER GLY ARG GLU GLN ASP VAL ARG SEQRES 13 B 478 VAL PHE MSE LEU ARG LEU TYR CYS ASN ILE PRO ASN ASP SEQRES 14 B 478 TYR TRP PRO PHE PRO TYR ILE ASN LYS GLN ASN ILE THR SEQRES 15 B 478 ASP LEU ILE ASN LYS MSE GLU LYS ILE LEU ASN VAL GLN SEQRES 16 B 478 MSE TYR THR TYR SER LYS HIS LYS LEU CYS VAL LEU PHE SEQRES 17 B 478 ALA ILE THR ILE SER ARG LEU LEU SER GLY ASN THR ILE SEQRES 18 B 478 ASP ASN VAL SER GLY LEU ILE LEU VAL ASN LYS ASN ASP SEQRES 19 B 478 ASP HIS TYR LYS THR VAL ALA SER ILE THR SER GLU LEU SEQRES 20 B 478 GLN ASN SER PHE GLY VAL THR LEU HIS GLU THR GLU ILE SEQRES 21 B 478 SER PHE LEU ALA LEU ALA LEU LEU LEU SER LEU GLY ASN SEQRES 22 B 478 SER ILE THR THR ASP SER ASN LYS THR LEU THR SER TYR SEQRES 23 B 478 LYS LYS THR ILE MSE PRO LEU ALA LYS GLU ILE THR LYS SEQRES 24 B 478 GLY ILE GLU HIS LYS LEU GLN LEU GLY ILE ASN TYR ASP SEQRES 25 B 478 GLU SER PHE LEU THR TYR VAL VAL LEU ILE ILE LYS LYS SEQRES 26 B 478 ALA LEU ASP LYS ASN PHE ILE GLN TYR TYR ASN TYR ASN SEQRES 27 B 478 ILE LYS PHE ILE ARG HIS ILE LYS GLN ARG HIS PRO ASN SEQRES 28 B 478 THR PHE ASN THR ILE GLN GLU CYS ILE SER ASN LEU ASN SEQRES 29 B 478 TYR THR VAL TYR SER HIS PHE ASP CYS TYR GLU ILE SER SEQRES 30 B 478 LEU LEU THR MSE HIS PHE GLU THR GLN ARG MSE LEU PHE SEQRES 31 B 478 LYS ASN ASN PRO LYS LYS ILE TYR VAL TYR THR SER GLN SEQRES 32 B 478 GLY CYS ILE HIS ARG GLU TYR ILE SER ALA LEU LEU GLU SEQRES 33 B 478 LYS ARG TYR ASN GLY LEU ILE LYS ILE VAL ARG ASN THR SEQRES 34 B 478 ILE ILE ASN LEU THR ASN GLU SER LEU GLN ASP MSE GLU SEQRES 35 B 478 ILE ASP ILE ILE ILE SER ASN VAL ASN LEU PRO ILE LYS SEQRES 36 B 478 ASN ILE PRO ILE VAL GLN ILE SER GLU PHE PRO THR GLU SEQRES 37 B 478 ARG ASP PHE HIS GLU ILE LYS LYS ILE ILE MODRES 4R6I MSE A 1 MET SELENOMETHIONINE MODRES 4R6I MSE A 106 MET SELENOMETHIONINE MODRES 4R6I MSE A 156 MET SELENOMETHIONINE MODRES 4R6I MSE A 185 MET SELENOMETHIONINE MODRES 4R6I MSE A 193 MET SELENOMETHIONINE MODRES 4R6I MSE A 288 MET SELENOMETHIONINE MODRES 4R6I MSE A 378 MET SELENOMETHIONINE MODRES 4R6I MSE A 385 MET SELENOMETHIONINE MODRES 4R6I MSE A 438 MET SELENOMETHIONINE MODRES 4R6I MSE B 1 MET SELENOMETHIONINE MODRES 4R6I MSE B 106 MET SELENOMETHIONINE MODRES 4R6I MSE B 156 MET SELENOMETHIONINE MODRES 4R6I MSE B 185 MET SELENOMETHIONINE MODRES 4R6I MSE B 193 MET SELENOMETHIONINE MODRES 4R6I MSE B 288 MET SELENOMETHIONINE MODRES 4R6I MSE B 378 MET SELENOMETHIONINE MODRES 4R6I MSE B 385 MET SELENOMETHIONINE MODRES 4R6I MSE B 438 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 106 8 HET MSE A 156 8 HET MSE A 185 8 HET MSE A 193 8 HET MSE A 288 8 HET MSE A 378 8 HET MSE A 385 8 HET MSE A 438 8 HET MSE B 1 8 HET MSE B 106 8 HET MSE B 156 8 HET MSE B 185 8 HET MSE B 193 8 HET MSE B 288 8 HET MSE B 378 8 HET MSE B 385 8 HET MSE B 438 8 HET LMT A 601 70 HET LMT B 601 35 HETNAM MSE SELENOMETHIONINE HETNAM LMT DODECYL-BETA-D-MALTOSIDE FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 LMT 2(C24 H46 O11) FORMUL 5 HOH *72(H2 O) HELIX 1 1 SER A 6 GLU A 8 5 3 HELIX 2 2 LYS A 9 GLN A 24 1 16 HELIX 3 3 THR A 29 GLN A 38 1 10 HELIX 4 4 ALA A 40 ILE A 55 1 16 HELIX 5 5 LEU A 79 SER A 90 1 12 HELIX 6 6 SER A 90 LYS A 102 1 13 HELIX 7 7 SER A 105 LEU A 113 1 9 HELIX 8 8 GLN A 116 ILE A 131 1 16 HELIX 9 9 GLN A 132 HIS A 135 5 4 HELIX 10 10 ARG A 148 TYR A 160 1 13 HELIX 11 11 ASN A 174 ASN A 190 1 17 HELIX 12 12 TYR A 194 SER A 214 1 21 HELIX 13 13 ASP A 231 GLY A 249 1 19 HELIX 14 14 HIS A 253 LEU A 268 1 16 HELIX 15 15 ASN A 277 GLN A 303 1 27 HELIX 16 16 ASP A 309 LYS A 326 1 18 HELIX 17 17 ASN A 335 HIS A 346 1 12 HELIX 18 18 HIS A 346 ASN A 359 1 14 HELIX 19 19 ASN A 361 SER A 366 1 6 HELIX 20 20 ASP A 369 ASN A 390 1 22 HELIX 21 21 GLY A 401 ASN A 417 1 17 HELIX 22 22 THR A 431 ASP A 437 1 7 HELIX 23 23 THR A 464 ILE A 475 1 12 HELIX 24 24 SER B 6 GLU B 8 5 3 HELIX 25 25 LYS B 9 GLN B 24 1 16 HELIX 26 26 THR B 29 GLN B 38 1 10 HELIX 27 27 ALA B 40 ILE B 55 1 16 HELIX 28 28 LEU B 79 SER B 90 1 12 HELIX 29 29 SER B 90 LYS B 102 1 13 HELIX 30 30 SER B 105 LEU B 113 1 9 HELIX 31 31 GLN B 116 ILE B 131 1 16 HELIX 32 32 GLN B 132 HIS B 135 5 4 HELIX 33 33 ARG B 148 TYR B 160 1 13 HELIX 34 34 ASN B 174 LEU B 189 1 16 HELIX 35 35 TYR B 194 SER B 214 1 21 HELIX 36 36 ASP B 231 GLY B 249 1 19 HELIX 37 37 HIS B 253 GLY B 269 1 17 HELIX 38 38 LYS B 278 GLN B 303 1 26 HELIX 39 39 ASP B 309 ASP B 325 1 17 HELIX 40 40 LYS B 326 PHE B 328 5 3 HELIX 41 41 ASN B 335 HIS B 346 1 12 HELIX 42 42 HIS B 346 SER B 358 1 13 HELIX 43 43 ASN B 361 SER B 366 1 6 HELIX 44 44 ASP B 369 ASN B 390 1 22 HELIX 45 45 GLY B 401 ASN B 417 1 17 HELIX 46 46 THR B 464 LYS B 473 1 10 SHEET 1 A 2 ASN A 60 LEU A 62 0 SHEET 2 A 2 TYR A 70 LYS A 72 -1 O TYR A 70 N LEU A 62 SHEET 1 B 2 ASN A 137 LYS A 139 0 SHEET 2 B 2 GLU A 144 SER A 146 -1 O SER A 146 N ASN A 137 SHEET 1 C 4 ILE A 420 ILE A 422 0 SHEET 2 C 4 LYS A 392 TYR A 397 1 N ILE A 394 O LYS A 421 SHEET 3 C 4 ILE A 442 SER A 445 1 O ILE A 444 N TYR A 395 SHEET 4 C 4 ILE A 456 GLN A 458 1 O VAL A 457 N ILE A 443 SHEET 1 D 2 ASN B 60 LEU B 62 0 SHEET 2 D 2 TYR B 70 LYS B 72 -1 O TYR B 70 N LEU B 62 SHEET 1 E 2 ASN B 137 LYS B 139 0 SHEET 2 E 2 GLU B 144 SER B 146 -1 O SER B 146 N ASN B 137 SHEET 1 F 3 ILE B 420 ILE B 422 0 SHEET 2 F 3 LYS B 392 VAL B 396 1 N ILE B 394 O LYS B 421 SHEET 3 F 3 ILE B 442 ILE B 444 1 O ILE B 442 N TYR B 395 LINK C MSE A 1 N LEU A 2 1555 1555 1.33 LINK C SER A 105 N MSE A 106 1555 1555 1.33 LINK C MSE A 106 N GLN A 107 1555 1555 1.33 LINK C PHE A 155 N MSE A 156 1555 1555 1.32 LINK C MSE A 156 N LEU A 157 1555 1555 1.33 LINK C LYS A 184 N MSE A 185 1555 1555 1.33 LINK C MSE A 185 N GLU A 186 1555 1555 1.33 LINK C GLN A 192 N MSE A 193 1555 1555 1.33 LINK C MSE A 193 N TYR A 194 1555 1555 1.32 LINK C ILE A 287 N MSE A 288 1555 1555 1.34 LINK C MSE A 288 N PRO A 289 1555 1555 1.32 LINK C THR A 377 N MSE A 378 1555 1555 1.33 LINK C MSE A 378 N HIS A 379 1555 1555 1.33 LINK C ARG A 384 N MSE A 385 1555 1555 1.32 LINK C MSE A 385 N LEU A 386 1555 1555 1.34 LINK C ASP A 437 N MSE A 438 1555 1555 1.33 LINK C MSE A 438 N GLU A 439 1555 1555 1.33 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N LEU B 2 1555 1555 1.34 LINK C SER B 105 N MSE B 106 1555 1555 1.33 LINK C MSE B 106 N GLN B 107 1555 1555 1.33 LINK C PHE B 155 N MSE B 156 1555 1555 1.33 LINK C MSE B 156 N LEU B 157 1555 1555 1.33 LINK C LYS B 184 N MSE B 185 1555 1555 1.33 LINK C MSE B 185 N GLU B 186 1555 1555 1.32 LINK C GLN B 192 N MSE B 193 1555 1555 1.33 LINK C MSE B 193 N TYR B 194 1555 1555 1.32 LINK C ILE B 287 N MSE B 288 1555 1555 1.34 LINK C MSE B 288 N PRO B 289 1555 1555 1.35 LINK C THR B 377 N MSE B 378 1555 1555 1.33 LINK C MSE B 378 N HIS B 379 1555 1555 1.32 LINK C ARG B 384 N MSE B 385 1555 1555 1.33 LINK C MSE B 385 N LEU B 386 1555 1555 1.33 LINK C ASP B 437 N MSE B 438 1555 1555 1.33 LINK C MSE B 438 N GLU B 439 1555 1555 1.34 CISPEP 1 LYS A 141 PRO A 142 0 -7.42 CISPEP 2 LYS B 141 PRO B 142 0 -7.45 SITE 1 AC1 5 LEU A 50 GLU A 54 LYS A 85 ILE A 86 SITE 2 AC1 5 LYS A 89 SITE 1 AC2 4 LEU B 50 GLU B 54 LYS B 85 LYS B 89 CRYST1 130.460 135.167 180.908 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007665 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007398 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005528 0.00000 HETATM 1 N MSE A 1 31.054 47.397 38.039 1.00 75.82 N ANISOU 1 N MSE A 1 9136 11025 8644 -138 121 527 N HETATM 2 CA MSE A 1 32.091 46.362 37.611 1.00 80.14 C ANISOU 2 CA MSE A 1 9721 11500 9227 -191 113 505 C HETATM 3 C MSE A 1 33.372 46.485 38.420 1.00 75.11 C ANISOU 3 C MSE A 1 9111 10823 8605 -163 126 470 C HETATM 4 O MSE A 1 34.223 47.340 38.148 1.00 72.60 O ANISOU 4 O MSE A 1 8826 10465 8293 -135 134 428 O HETATM 5 CB MSE A 1 32.484 46.453 36.124 1.00 83.01 C ANISOU 5 CB MSE A 1 10126 11807 9607 -222 105 475 C HETATM 6 CG MSE A 1 31.655 45.738 35.040 1.00 88.74 C ANISOU 6 CG MSE A 1 10848 12536 10332 -282 84 502 C HETATM 7 SE MSE A 1 30.219 44.590 35.742 0.65107.65 SE ANISOU 7 SE MSE A 1 13181 15008 12711 -323 65 581 SE HETATM 8 CE MSE A 1 28.727 44.881 34.485 1.00100.05 C ANISOU 8 CE MSE A 1 12193 14091 11728 -356 42 620 C