HEADER TRANSCRIPTION 02-SEP-14 4R8H TITLE THE ROLE OF PROTEIN-LIGAND CONTACTS IN ALLOSTERIC REGULATION OF THE TITLE 2 ESCHERICHIA COLI CATABOLITE ACTIVATOR PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-ACTIVATED GLOBAL TRANSCRIPTIONAL REGULATOR CRP; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CATABOLITE ACTIVATOR PROTEIN, CAP, CATABOLITE GENE COMPND 5 ACTIVATOR, CAMP RECEPTOR PROTEIN, CRP, CAMP REGULATORY PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: CRP, CAP, CSM, B3357, JW5702; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS TRANSCRIPTION FACTOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR P.D.TOWNSEND,E.POHL,T.C.B.MCLEISH,T.L.RODGERS,L.C.GLOVER, AUTHOR 2 H.J.KORHONEN,M.R.WILSON,D.R.W.HODGSON,M.J.CANN REVDAT 5 28-FEB-24 4R8H 1 REMARK SEQADV REVDAT 4 23-SEP-15 4R8H 1 JRNL REVDAT 3 05-AUG-15 4R8H 1 JRNL REVDAT 2 29-JUL-15 4R8H 1 JRNL REMARK REVDAT 1 22-JUL-15 4R8H 0 JRNL AUTH P.D.TOWNSEND,T.L.RODGERS,L.C.GLOVER,H.J.KORHONEN, JRNL AUTH 2 S.A.RICHARDS,L.J.COLWELL,E.POHL,M.R.WILSON,D.R.HODGSON, JRNL AUTH 3 T.C.MCLEISH,M.J.CANN JRNL TITL THE ROLE OF PROTEIN-LIGAND CONTACTS IN ALLOSTERIC REGULATION JRNL TITL 2 OF THE ESCHERICHIA COLI CATABOLITE ACTIVATOR PROTEIN. JRNL REF J.BIOL.CHEM. V. 290 22225 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 26187469 JRNL DOI 10.1074/JBC.M115.669267 REMARK 2 REMARK 2 RESOLUTION. 1.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 75955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4052 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.46 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.50 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5571 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 268 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3090 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 255 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.98000 REMARK 3 B22 (A**2) : 1.11000 REMARK 3 B33 (A**2) : 0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.73000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.066 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.242 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3317 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4502 ; 1.806 ; 2.007 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 415 ; 7.361 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;39.761 ;24.242 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 584 ;15.397 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;15.208 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 527 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2382 ; 0.021 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1618 ; 4.077 ; 2.690 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2023 ; 5.288 ; 4.007 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1699 ; 6.577 ; 3.133 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5176 ; 6.812 ;25.916 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 9 207 B 9 207 230 0.13 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4R8H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087031. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9687 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 80040 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.460 REMARK 200 RESOLUTION RANGE LOW (A) : 51.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MPD, MES, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.13000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 GLN A 7 REMARK 465 THR A 8 REMARK 465 THR A 209 REMARK 465 ARG A 210 REMARK 465 MET B -11 REMARK 465 ARG B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 LEU B 3 REMARK 465 GLY B 4 REMARK 465 LYS B 5 REMARK 465 PRO B 6 REMARK 465 GLN B 7 REMARK 465 THR B 8 REMARK 465 ARG B 210 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLU A 79 CG CD OE1 OE2 REMARK 470 GLU A 94 CG CD OE1 OE2 REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 LYS A 153 CG CD CE NZ REMARK 470 MET A 158 CG SD CE REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 GLU A 182 CG CD OE1 OE2 REMARK 470 HIS A 200 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 ASP B 9 CG OD1 OD2 REMARK 470 GLU B 79 CG CD OE1 OE2 REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 LYS B 167 CG CD CE NZ REMARK 470 ALA B 199 CB REMARK 470 HIS B 200 CB CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 202 CB CG CD CE NZ REMARK 470 THR B 209 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 GOL B 304 O HOH B 473 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 121 CG - SD - CE ANGL. DEV. = -19.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 27 -2.88 81.48 REMARK 500 LYS B 27 -7.37 80.85 REMARK 500 GLU B 38 -0.49 -140.25 REMARK 500 ALA B 199 -127.60 -64.99 REMARK 500 HIS B 200 -134.39 100.89 REMARK 500 LYS B 202 22.38 -72.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 202 THR B 203 -138.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SP1 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SP1 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SP1 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SP1 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 304 DBREF 4R8H A 1 210 UNP P0ACJ8 CRP_ECOLI 1 210 DBREF 4R8H B 1 210 UNP P0ACJ8 CRP_ECOLI 1 210 SEQADV 4R8H MET A -11 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H ARG A -10 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H GLY A -9 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H SER A -8 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS A -7 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS A -6 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS A -5 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS A -4 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS A -3 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS A -2 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H GLY A -1 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H SER A 0 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H MET B -11 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H ARG B -10 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H GLY B -9 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H SER B -8 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS B -7 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS B -6 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS B -5 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS B -4 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS B -3 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H HIS B -2 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H GLY B -1 UNP P0ACJ8 EXPRESSION TAG SEQADV 4R8H SER B 0 UNP P0ACJ8 EXPRESSION TAG SEQRES 1 A 222 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 A 222 VAL LEU GLY LYS PRO GLN THR ASP PRO THR LEU GLU TRP SEQRES 3 A 222 PHE LEU SER HIS CYS HIS ILE HIS LYS TYR PRO SER LYS SEQRES 4 A 222 SER THR LEU ILE HIS GLN GLY GLU LYS ALA GLU THR LEU SEQRES 5 A 222 TYR TYR ILE VAL LYS GLY SER VAL ALA VAL LEU ILE LYS SEQRES 6 A 222 ASP GLU GLU GLY LYS GLU MET ILE LEU SER TYR LEU ASN SEQRES 7 A 222 GLN GLY ASP PHE ILE GLY GLU LEU GLY LEU PHE GLU GLU SEQRES 8 A 222 GLY GLN GLU ARG SER ALA TRP VAL ARG ALA LYS THR ALA SEQRES 9 A 222 CYS GLU VAL ALA GLU ILE SER TYR LYS LYS PHE ARG GLN SEQRES 10 A 222 LEU ILE GLN VAL ASN PRO ASP ILE LEU MET ARG LEU SER SEQRES 11 A 222 ALA GLN MET ALA ARG ARG LEU GLN VAL THR SER GLU LYS SEQRES 12 A 222 VAL GLY ASN LEU ALA PHE LEU ASP VAL THR GLY ARG ILE SEQRES 13 A 222 ALA GLN THR LEU LEU ASN LEU ALA LYS GLN PRO ASP ALA SEQRES 14 A 222 MET THR HIS PRO ASP GLY MET GLN ILE LYS ILE THR ARG SEQRES 15 A 222 GLN GLU ILE GLY GLN ILE VAL GLY CYS SER ARG GLU THR SEQRES 16 A 222 VAL GLY ARG ILE LEU LYS MET LEU GLU ASP GLN ASN LEU SEQRES 17 A 222 ILE SER ALA HIS GLY LYS THR ILE VAL VAL TYR GLY THR SEQRES 18 A 222 ARG SEQRES 1 B 222 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER MET SEQRES 2 B 222 VAL LEU GLY LYS PRO GLN THR ASP PRO THR LEU GLU TRP SEQRES 3 B 222 PHE LEU SER HIS CYS HIS ILE HIS LYS TYR PRO SER LYS SEQRES 4 B 222 SER THR LEU ILE HIS GLN GLY GLU LYS ALA GLU THR LEU SEQRES 5 B 222 TYR TYR ILE VAL LYS GLY SER VAL ALA VAL LEU ILE LYS SEQRES 6 B 222 ASP GLU GLU GLY LYS GLU MET ILE LEU SER TYR LEU ASN SEQRES 7 B 222 GLN GLY ASP PHE ILE GLY GLU LEU GLY LEU PHE GLU GLU SEQRES 8 B 222 GLY GLN GLU ARG SER ALA TRP VAL ARG ALA LYS THR ALA SEQRES 9 B 222 CYS GLU VAL ALA GLU ILE SER TYR LYS LYS PHE ARG GLN SEQRES 10 B 222 LEU ILE GLN VAL ASN PRO ASP ILE LEU MET ARG LEU SER SEQRES 11 B 222 ALA GLN MET ALA ARG ARG LEU GLN VAL THR SER GLU LYS SEQRES 12 B 222 VAL GLY ASN LEU ALA PHE LEU ASP VAL THR GLY ARG ILE SEQRES 13 B 222 ALA GLN THR LEU LEU ASN LEU ALA LYS GLN PRO ASP ALA SEQRES 14 B 222 MET THR HIS PRO ASP GLY MET GLN ILE LYS ILE THR ARG SEQRES 15 B 222 GLN GLU ILE GLY GLN ILE VAL GLY CYS SER ARG GLU THR SEQRES 16 B 222 VAL GLY ARG ILE LEU LYS MET LEU GLU ASP GLN ASN LEU SEQRES 17 B 222 ILE SER ALA HIS GLY LYS THR ILE VAL VAL TYR GLY THR SEQRES 18 B 222 ARG HET SP1 A 301 22 HET SP1 A 302 22 HET GOL A 303 6 HET GOL A 304 6 HET GOL A 305 6 HET GOL A 306 6 HET GOL A 307 6 HET SP1 B 301 22 HET SP1 B 302 22 HET GOL B 303 6 HET GOL B 304 6 HETNAM SP1 6-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2- HETNAM 2 SP1 D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL HETNAM GOL GLYCEROL HETSYN SP1 SP-ADENOSINE-3',5'-CYCLIC-MONOPHOSPHOROTHIOATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SP1 4(C10 H12 N5 O5 P S) FORMUL 5 GOL 7(C3 H8 O3) FORMUL 14 HOH *255(H2 O) HELIX 1 1 ASP A 9 SER A 17 1 9 HELIX 2 2 GLU A 73 GLU A 78 5 6 HELIX 3 3 TYR A 100 ASN A 110 1 11 HELIX 4 4 PRO A 111 LEU A 138 1 28 HELIX 5 5 ASP A 139 LYS A 153 1 15 HELIX 6 6 THR A 169 GLY A 178 1 10 HELIX 7 7 SER A 180 GLN A 194 1 15 HELIX 8 8 PRO B 10 HIS B 18 1 9 HELIX 9 9 GLU B 73 GLU B 78 5 6 HELIX 10 10 TYR B 100 ASN B 110 1 11 HELIX 11 11 PRO B 111 LEU B 138 1 28 HELIX 12 12 ASP B 139 LYS B 153 1 15 HELIX 13 13 THR B 169 GLY B 178 1 10 HELIX 14 14 SER B 180 GLN B 194 1 15 SHEET 1 A 4 HIS A 20 TYR A 24 0 SHEET 2 A 4 CYS A 93 SER A 99 -1 O VAL A 95 N HIS A 22 SHEET 3 A 4 THR A 39 LYS A 45 -1 N TYR A 42 O ALA A 96 SHEET 4 A 4 PHE A 70 ILE A 71 -1 O ILE A 71 N TYR A 41 SHEET 1 B 4 THR A 29 ILE A 31 0 SHEET 2 B 4 TRP A 86 ALA A 89 -1 O VAL A 87 N LEU A 30 SHEET 3 B 4 SER A 47 LYS A 53 -1 N LEU A 51 O TRP A 86 SHEET 4 B 4 GLU A 59 ASN A 66 -1 O SER A 63 N VAL A 50 SHEET 1 C 4 MET A 158 HIS A 160 0 SHEET 2 C 4 GLY A 163 LYS A 167 -1 O GLN A 165 N MET A 158 SHEET 3 C 4 THR A 203 TYR A 207 -1 O VAL A 206 N MET A 164 SHEET 4 C 4 ILE A 197 HIS A 200 -1 N HIS A 200 O THR A 203 SHEET 1 D 4 HIS B 20 TYR B 24 0 SHEET 2 D 4 CYS B 93 SER B 99 -1 O CYS B 93 N TYR B 24 SHEET 3 D 4 THR B 39 LYS B 45 -1 N TYR B 42 O ALA B 96 SHEET 4 D 4 PHE B 70 ILE B 71 -1 O ILE B 71 N TYR B 41 SHEET 1 E 4 THR B 29 ILE B 31 0 SHEET 2 E 4 TRP B 86 ALA B 89 -1 O VAL B 87 N LEU B 30 SHEET 3 E 4 SER B 47 LYS B 53 -1 N ALA B 49 O ARG B 88 SHEET 4 E 4 GLU B 59 ASN B 66 -1 O SER B 63 N VAL B 50 SHEET 1 F 4 MET B 158 THR B 159 0 SHEET 2 F 4 GLY B 163 LYS B 167 -1 O GLN B 165 N MET B 158 SHEET 3 F 4 THR B 203 TYR B 207 -1 O VAL B 206 N MET B 164 SHEET 4 F 4 ILE B 197 SER B 198 -1 N SER B 198 O VAL B 205 SITE 1 AC1 16 VAL A 50 SER A 63 ILE A 71 GLY A 72 SITE 2 AC1 16 GLU A 73 LEU A 74 GLY A 75 ARG A 83 SITE 3 AC1 16 SER A 84 ALA A 85 ARG A 124 THR A 128 SITE 4 AC1 16 HOH A 402 HOH A 405 LEU B 125 SER B 129 SITE 1 AC2 12 LYS A 58 GLU A 59 GLN A 171 GLY A 174 SITE 2 AC2 12 GLN A 175 GLY A 178 CYS A 179 SER A 180 SITE 3 AC2 12 ARG A 181 HOH A 491 HOH A 510 ALA B 136 SITE 1 AC3 4 TYR A 64 LYS A 131 ASN A 150 GLN A 154 SITE 1 AC4 5 GLN A 108 HOH A 424 LYS B 189 MET B 190 SITE 2 AC4 5 ASP B 193 SITE 1 AC5 1 GLN A 105 SITE 1 AC6 7 ASP A 69 GLN A 120 ARG A 123 ARG A 124 SITE 2 AC6 7 HOH A 411 HOH A 493 HOH A 531 SITE 1 AC7 4 LYS A 131 ASN A 134 ILE A 176 HOH A 416 SITE 1 AC8 16 LEU A 125 SER A 129 VAL B 50 SER B 63 SITE 2 AC8 16 ILE B 71 GLY B 72 GLU B 73 LEU B 74 SITE 3 AC8 16 GLY B 75 ARG B 83 SER B 84 ALA B 85 SITE 4 AC8 16 ARG B 124 THR B 128 HOH B 403 HOH B 406 SITE 1 AC9 10 LYS B 58 GLU B 59 GLN B 171 GLY B 174 SITE 2 AC9 10 GLN B 175 GLY B 178 CYS B 179 SER B 180 SITE 3 AC9 10 ARG B 181 HOH B 466 SITE 1 BC1 4 LYS B 131 LEU B 151 HOH B 429 HOH B 473 SITE 1 BC2 7 LYS B 131 ASN B 134 ARG B 143 THR B 147 SITE 2 BC2 7 ILE B 176 HOH B 404 HOH B 473 CRYST1 45.730 102.260 54.300 90.00 111.55 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021867 0.000000 0.008636 0.00000 SCALE2 0.000000 0.009779 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019800 0.00000