data_4RCJ # _entry.id 4RCJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RCJ pdb_00004rcj 10.2210/pdb4rcj/pdb NDB NA3171 ? ? RCSB RCSB087176 ? ? WWPDB D_1000087176 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4RCI . unspecified PDB 4RCM . unspecified # _pdbx_database_status.entry_id 4RCJ _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-09-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tempel, W.' 1 'Xu, C.' 2 'Bountra, C.' 3 'Arrowsmith, C.H.' 4 'Edwards, A.M.' 5 'Min, J.' 6 'Structural Genomics Consortium (SGC)' 7 # _citation.id primary _citation.title ;Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 290 _citation.page_first 24902 _citation.page_last 24913 _citation.year 2015 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26318451 _citation.pdbx_database_id_DOI 10.1074/jbc.M115.680389 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, C.' 1 ? primary 'Liu, K.' 2 ? primary 'Ahmed, H.' 3 ? primary 'Loppnau, P.' 4 ? primary 'Schapira, M.' 5 ? primary 'Min, J.' 6 ? # _cell.entry_id 4RCJ _cell.length_a 37.648 _cell.length_b 40.029 _cell.length_c 59.308 _cell.angle_alpha 90.00 _cell.angle_beta 93.41 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RCJ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'YTH domain-containing family protein 1' 22248.084 1 ? ? 'UNP residues 365-554' ? 2 polymer syn ;RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3') ; 1600.035 1 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 7 ? ? ? ? 4 water nat water 18.015 177 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dermatomyositis associated with cancer putative autoantigen 1, DACA-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GHPVLEKLKAAHSYNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGS GHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKII SSYKHTTSIFDDFAHYEKRQEEEEVVRKERQ ; ;GHPVLEKLKAAHSYNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGS GHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKII SSYKHTTSIFDDFAHYEKRQEEEEVVRKERQ ; A ? 2 polyribonucleotide no yes 'GG(6MZ)CU' GGACU B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 PRO n 1 4 VAL n 1 5 LEU n 1 6 GLU n 1 7 LYS n 1 8 LEU n 1 9 LYS n 1 10 ALA n 1 11 ALA n 1 12 HIS n 1 13 SER n 1 14 TYR n 1 15 ASN n 1 16 PRO n 1 17 LYS n 1 18 GLU n 1 19 PHE n 1 20 GLU n 1 21 TRP n 1 22 ASN n 1 23 LEU n 1 24 LYS n 1 25 SER n 1 26 GLY n 1 27 ARG n 1 28 VAL n 1 29 PHE n 1 30 ILE n 1 31 ILE n 1 32 LYS n 1 33 SER n 1 34 TYR n 1 35 SER n 1 36 GLU n 1 37 ASP n 1 38 ASP n 1 39 ILE n 1 40 HIS n 1 41 ARG n 1 42 SER n 1 43 ILE n 1 44 LYS n 1 45 TYR n 1 46 SER n 1 47 ILE n 1 48 TRP n 1 49 CYS n 1 50 SER n 1 51 THR n 1 52 GLU n 1 53 HIS n 1 54 GLY n 1 55 ASN n 1 56 LYS n 1 57 ARG n 1 58 LEU n 1 59 ASP n 1 60 SER n 1 61 ALA n 1 62 PHE n 1 63 ARG n 1 64 CYS n 1 65 MET n 1 66 SER n 1 67 SER n 1 68 LYS n 1 69 GLY n 1 70 PRO n 1 71 VAL n 1 72 TYR n 1 73 LEU n 1 74 LEU n 1 75 PHE n 1 76 SER n 1 77 VAL n 1 78 ASN n 1 79 GLY n 1 80 SER n 1 81 GLY n 1 82 HIS n 1 83 PHE n 1 84 CYS n 1 85 GLY n 1 86 VAL n 1 87 ALA n 1 88 GLU n 1 89 MET n 1 90 LYS n 1 91 SER n 1 92 PRO n 1 93 VAL n 1 94 ASP n 1 95 TYR n 1 96 GLY n 1 97 THR n 1 98 SER n 1 99 ALA n 1 100 GLY n 1 101 VAL n 1 102 TRP n 1 103 SER n 1 104 GLN n 1 105 ASP n 1 106 LYS n 1 107 TRP n 1 108 LYS n 1 109 GLY n 1 110 LYS n 1 111 PHE n 1 112 ASP n 1 113 VAL n 1 114 GLN n 1 115 TRP n 1 116 ILE n 1 117 PHE n 1 118 VAL n 1 119 LYS n 1 120 ASP n 1 121 VAL n 1 122 PRO n 1 123 ASN n 1 124 ASN n 1 125 GLN n 1 126 LEU n 1 127 ARG n 1 128 HIS n 1 129 ILE n 1 130 ARG n 1 131 LEU n 1 132 GLU n 1 133 ASN n 1 134 ASN n 1 135 ASP n 1 136 ASN n 1 137 LYS n 1 138 PRO n 1 139 VAL n 1 140 THR n 1 141 ASN n 1 142 SER n 1 143 ARG n 1 144 ASP n 1 145 THR n 1 146 GLN n 1 147 GLU n 1 148 VAL n 1 149 PRO n 1 150 LEU n 1 151 GLU n 1 152 LYS n 1 153 ALA n 1 154 LYS n 1 155 GLN n 1 156 VAL n 1 157 LEU n 1 158 LYS n 1 159 ILE n 1 160 ILE n 1 161 SER n 1 162 SER n 1 163 TYR n 1 164 LYS n 1 165 HIS n 1 166 THR n 1 167 THR n 1 168 SER n 1 169 ILE n 1 170 PHE n 1 171 ASP n 1 172 ASP n 1 173 PHE n 1 174 ALA n 1 175 HIS n 1 176 TYR n 1 177 GLU n 1 178 LYS n 1 179 ARG n 1 180 GLN n 1 181 GLU n 1 182 GLU n 1 183 GLU n 1 184 GLU n 1 185 VAL n 1 186 VAL n 1 187 ARG n 1 188 LYS n 1 189 GLU n 1 190 ARG n 1 191 GLN n 2 1 G n 2 2 G n 2 3 6MZ n 2 4 C n 2 5 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YTHDF1, C20orf21' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-V2R-pRARE2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP YTHD1_HUMAN Q9BYJ9 1 ;HPVLEKLKAAHSYNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSG HFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIS SYKHTTSIFDDFAHYEKRQEEEEVVRKERQ ; 365 ? 2 PDB 4RCJ 4RCJ 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RCJ A 2 ? 191 ? Q9BYJ9 365 ? 554 ? 365 554 2 2 4RCJ B 1 ? 5 ? 4RCJ 1 ? 5 ? 1 5 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4RCJ _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9BYJ9 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 364 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6MZ 'RNA linking' n "N6-METHYLADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O7 P' 361.248 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4RCJ _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 34.8 _exptl_crystal.density_Matthews 1.9 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '25% PEG-3350, 0.2 M sodium chloride, 0.1 M bis-tris, pH 6.5, vapor diffusion, sitting drop, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2014-07-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791829 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.9791829 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 4RCJ _reflns.d_resolution_high 1.600 _reflns.d_resolution_low 40.030 _reflns.number_obs 23138 _reflns.pdbx_Rmerge_I_obs 0.102 _reflns.pdbx_netI_over_sigmaI 9.400 _reflns.pdbx_redundancy 3.600 _reflns.percent_possible_obs 99.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.600 1.630 ? 3203 ? 0.609 1.800 ? ? 3.000 ? 1073 93.500 1 1 8.790 40.030 ? 505 ? 0.035 21.000 ? ? 3.200 ? 158 97.500 2 1 # _refine.entry_id 4RCJ _refine.ls_d_res_high 1.6000 _refine.ls_d_res_low 40.030 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.3500 _refine.ls_number_reflns_obs 23124 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;ARP/WARP WAS USED IN DENSITY IMPROVEMENT MODE AFTER MOLECULAR REPLACEMENT. JLIGAND WAS USED FOR PREPARATION OF NUCLEOTIDE LINK RESTRAINT TARGETS. COOT WAS USED FOR INTERACTIVE MODEL BUILDING. MODEL GEOMETRY WAS EVALUATED WITH MOLPROBITY. WEAK ELECTRON DENSITY NEAR THE 3'-END OF THE MODELED OLIGONUCLEOTIDE SUGGESTS THE PRESENCE OF AN ADDITIONAL NUCLEOTIDE. ; _refine.ls_R_factor_obs 0.1732 _refine.ls_R_factor_R_work 0.1711 _refine.ls_wR_factor_R_work 0.1607 _refine.ls_R_factor_R_free 0.2096 _refine.ls_wR_factor_R_free 0.1990 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1164 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 14.3510 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.3400 _refine.aniso_B[2][2] 0.3800 _refine.aniso_B[3][3] -0.0200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.1600 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9580 _refine.correlation_coeff_Fo_to_Fc_free 0.9400 _refine.overall_SU_R_Cruickshank_DPI 0.0988 _refine.overall_SU_R_free 0.0988 _refine.pdbx_overall_ESU_R 0.0990 _refine.pdbx_overall_ESU_R_Free 0.0990 _refine.overall_SU_ML 0.0710 _refine.overall_SU_B 2.0420 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 4RCI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8468 _refine.B_iso_max 58.760 _refine.B_iso_min 4.000 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.ls_R_factor_all ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1519 _refine_hist.pdbx_number_atoms_nucleic_acid 91 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 177 _refine_hist.number_atoms_total 1794 _refine_hist.d_res_high 1.6000 _refine_hist.d_res_low 40.030 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1694 0.019 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1513 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2315 1.944 1.909 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3491 1.387 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 195 6.276 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 82 30.885 24.024 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 279 11.637 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 10 6.668 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 241 0.128 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1864 0.011 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 410 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 759 1.803 1.190 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 758 1.770 1.184 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 949 2.576 1.777 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.60 _refine_ls_shell.d_res_low 1.6470 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 95.6600 _refine_ls_shell.number_reflns_R_work 1565 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2940 _refine_ls_shell.R_factor_R_free 0.3350 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1633 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4RCJ _struct.title 'Crystal structure of YTHDF1 YTH domain in complex with 5mer m6A RNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RCJ _struct_keywords.text 'Structural Genomics, Structural Genomics Consortium, SGC, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 2 ? HIS A 12 ? HIS A 365 HIS A 375 1 ? 11 HELX_P HELX_P2 2 SER A 35 ? SER A 46 ? SER A 398 SER A 409 1 ? 12 HELX_P HELX_P3 3 THR A 51 ? SER A 66 ? THR A 414 SER A 429 1 ? 16 HELX_P HELX_P4 4 ASN A 124 ? LEU A 126 ? ASN A 487 LEU A 489 5 ? 3 HELX_P HELX_P5 5 LEU A 131 ? ASP A 135 ? LEU A 494 ASP A 498 5 ? 5 HELX_P HELX_P6 6 PRO A 138 ? SER A 142 ? PRO A 501 SER A 505 5 ? 5 HELX_P HELX_P7 7 PRO A 149 ? TYR A 163 ? PRO A 512 TYR A 526 1 ? 15 HELX_P HELX_P8 8 SER A 168 ? ASP A 171 ? SER A 531 ASP A 534 5 ? 4 HELX_P HELX_P9 9 ASP A 172 ? LYS A 188 ? ASP A 535 LYS A 551 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B G 2 "O3'" ? ? ? 1_555 B 6MZ 3 P ? ? B G 2 B 6MZ 3 1_555 ? ? ? ? ? ? ? 1.569 ? ? covale2 covale both ? B 6MZ 3 "O3'" ? ? ? 1_555 B C 4 P ? ? B 6MZ 3 B C 4 1_555 ? ? ? ? ? ? ? 1.660 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 47 ? TRP A 48 ? ILE A 410 TRP A 411 A 2 PHE A 111 ? PRO A 122 ? PHE A 474 PRO A 485 A 3 HIS A 82 ? MET A 89 ? HIS A 445 MET A 452 A 4 VAL A 71 ? VAL A 77 ? VAL A 434 VAL A 440 A 5 ARG A 27 ? SER A 33 ? ARG A 390 SER A 396 A 6 GLU A 147 ? VAL A 148 ? GLU A 510 VAL A 511 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 48 ? N TRP A 411 O PHE A 111 ? O PHE A 474 A 2 3 O ILE A 116 ? O ILE A 479 N VAL A 86 ? N VAL A 449 A 3 4 O ALA A 87 ? O ALA A 450 N LEU A 73 ? N LEU A 436 A 4 5 O LEU A 74 ? O LEU A 437 N ILE A 31 ? N ILE A 394 A 5 6 N VAL A 28 ? N VAL A 391 O VAL A 148 ? O VAL A 511 # _atom_sites.entry_id 4RCJ _atom_sites.fract_transf_matrix[1][1] 0.026562 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001583 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024982 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016891 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 364 ? ? ? A . n A 1 2 HIS 2 365 365 HIS HIS A . n A 1 3 PRO 3 366 366 PRO PRO A . n A 1 4 VAL 4 367 367 VAL VAL A . n A 1 5 LEU 5 368 368 LEU LEU A . n A 1 6 GLU 6 369 369 GLU GLU A . n A 1 7 LYS 7 370 370 LYS LYS A . n A 1 8 LEU 8 371 371 LEU LEU A . n A 1 9 LYS 9 372 372 LYS LYS A . n A 1 10 ALA 10 373 373 ALA ALA A . n A 1 11 ALA 11 374 374 ALA ALA A . n A 1 12 HIS 12 375 375 HIS HIS A . n A 1 13 SER 13 376 376 SER SER A . n A 1 14 TYR 14 377 377 TYR TYR A . n A 1 15 ASN 15 378 378 ASN ASN A . n A 1 16 PRO 16 379 379 PRO PRO A . n A 1 17 LYS 17 380 380 LYS LYS A . n A 1 18 GLU 18 381 381 GLU GLU A . n A 1 19 PHE 19 382 382 PHE PHE A . n A 1 20 GLU 20 383 383 GLU GLU A . n A 1 21 TRP 21 384 384 TRP TRP A . n A 1 22 ASN 22 385 385 ASN ASN A . n A 1 23 LEU 23 386 386 LEU LEU A . n A 1 24 LYS 24 387 387 LYS LYS A . n A 1 25 SER 25 388 388 SER SER A . n A 1 26 GLY 26 389 389 GLY GLY A . n A 1 27 ARG 27 390 390 ARG ARG A . n A 1 28 VAL 28 391 391 VAL VAL A . n A 1 29 PHE 29 392 392 PHE PHE A . n A 1 30 ILE 30 393 393 ILE ILE A . n A 1 31 ILE 31 394 394 ILE ILE A . n A 1 32 LYS 32 395 395 LYS LYS A . n A 1 33 SER 33 396 396 SER SER A . n A 1 34 TYR 34 397 397 TYR TYR A . n A 1 35 SER 35 398 398 SER SER A . n A 1 36 GLU 36 399 399 GLU GLU A . n A 1 37 ASP 37 400 400 ASP ASP A . n A 1 38 ASP 38 401 401 ASP ASP A . n A 1 39 ILE 39 402 402 ILE ILE A . n A 1 40 HIS 40 403 403 HIS HIS A . n A 1 41 ARG 41 404 404 ARG ARG A . n A 1 42 SER 42 405 405 SER SER A . n A 1 43 ILE 43 406 406 ILE ILE A . n A 1 44 LYS 44 407 407 LYS LYS A . n A 1 45 TYR 45 408 408 TYR TYR A . n A 1 46 SER 46 409 409 SER SER A . n A 1 47 ILE 47 410 410 ILE ILE A . n A 1 48 TRP 48 411 411 TRP TRP A . n A 1 49 CYS 49 412 412 CYS CYS A . n A 1 50 SER 50 413 413 SER SER A . n A 1 51 THR 51 414 414 THR THR A . n A 1 52 GLU 52 415 415 GLU GLU A . n A 1 53 HIS 53 416 416 HIS HIS A . n A 1 54 GLY 54 417 417 GLY GLY A . n A 1 55 ASN 55 418 418 ASN ASN A . n A 1 56 LYS 56 419 419 LYS LYS A . n A 1 57 ARG 57 420 420 ARG ARG A . n A 1 58 LEU 58 421 421 LEU LEU A . n A 1 59 ASP 59 422 422 ASP ASP A . n A 1 60 SER 60 423 423 SER SER A . n A 1 61 ALA 61 424 424 ALA ALA A . n A 1 62 PHE 62 425 425 PHE PHE A . n A 1 63 ARG 63 426 426 ARG ARG A . n A 1 64 CYS 64 427 427 CYS CYS A . n A 1 65 MET 65 428 428 MET MET A . n A 1 66 SER 66 429 429 SER SER A . n A 1 67 SER 67 430 430 SER SER A . n A 1 68 LYS 68 431 431 LYS LYS A . n A 1 69 GLY 69 432 432 GLY GLY A . n A 1 70 PRO 70 433 433 PRO PRO A . n A 1 71 VAL 71 434 434 VAL VAL A . n A 1 72 TYR 72 435 435 TYR TYR A . n A 1 73 LEU 73 436 436 LEU LEU A . n A 1 74 LEU 74 437 437 LEU LEU A . n A 1 75 PHE 75 438 438 PHE PHE A . n A 1 76 SER 76 439 439 SER SER A . n A 1 77 VAL 77 440 440 VAL VAL A . n A 1 78 ASN 78 441 441 ASN ASN A . n A 1 79 GLY 79 442 442 GLY GLY A . n A 1 80 SER 80 443 443 SER SER A . n A 1 81 GLY 81 444 444 GLY GLY A . n A 1 82 HIS 82 445 445 HIS HIS A . n A 1 83 PHE 83 446 446 PHE PHE A . n A 1 84 CYS 84 447 447 CYS CYS A . n A 1 85 GLY 85 448 448 GLY GLY A . n A 1 86 VAL 86 449 449 VAL VAL A . n A 1 87 ALA 87 450 450 ALA ALA A . n A 1 88 GLU 88 451 451 GLU GLU A . n A 1 89 MET 89 452 452 MET MET A . n A 1 90 LYS 90 453 453 LYS LYS A . n A 1 91 SER 91 454 454 SER SER A . n A 1 92 PRO 92 455 455 PRO PRO A . n A 1 93 VAL 93 456 456 VAL VAL A . n A 1 94 ASP 94 457 457 ASP ASP A . n A 1 95 TYR 95 458 458 TYR TYR A . n A 1 96 GLY 96 459 459 GLY GLY A . n A 1 97 THR 97 460 460 THR THR A . n A 1 98 SER 98 461 461 SER SER A . n A 1 99 ALA 99 462 462 ALA ALA A . n A 1 100 GLY 100 463 463 GLY GLY A . n A 1 101 VAL 101 464 464 VAL VAL A . n A 1 102 TRP 102 465 465 TRP TRP A . n A 1 103 SER 103 466 466 SER SER A . n A 1 104 GLN 104 467 467 GLN GLN A . n A 1 105 ASP 105 468 468 ASP ASP A . n A 1 106 LYS 106 469 469 LYS LYS A . n A 1 107 TRP 107 470 470 TRP TRP A . n A 1 108 LYS 108 471 471 LYS LYS A . n A 1 109 GLY 109 472 472 GLY GLY A . n A 1 110 LYS 110 473 473 LYS LYS A . n A 1 111 PHE 111 474 474 PHE PHE A . n A 1 112 ASP 112 475 475 ASP ASP A . n A 1 113 VAL 113 476 476 VAL VAL A . n A 1 114 GLN 114 477 477 GLN GLN A . n A 1 115 TRP 115 478 478 TRP TRP A . n A 1 116 ILE 116 479 479 ILE ILE A . n A 1 117 PHE 117 480 480 PHE PHE A . n A 1 118 VAL 118 481 481 VAL VAL A . n A 1 119 LYS 119 482 482 LYS LYS A . n A 1 120 ASP 120 483 483 ASP ASP A . n A 1 121 VAL 121 484 484 VAL VAL A . n A 1 122 PRO 122 485 485 PRO PRO A . n A 1 123 ASN 123 486 486 ASN ASN A . n A 1 124 ASN 124 487 487 ASN ASN A . n A 1 125 GLN 125 488 488 GLN GLN A . n A 1 126 LEU 126 489 489 LEU LEU A . n A 1 127 ARG 127 490 490 ARG ARG A . n A 1 128 HIS 128 491 491 HIS HIS A . n A 1 129 ILE 129 492 492 ILE ILE A . n A 1 130 ARG 130 493 493 ARG ARG A . n A 1 131 LEU 131 494 494 LEU LEU A . n A 1 132 GLU 132 495 495 GLU GLU A . n A 1 133 ASN 133 496 496 ASN ASN A . n A 1 134 ASN 134 497 497 ASN ASN A . n A 1 135 ASP 135 498 498 ASP ASP A . n A 1 136 ASN 136 499 499 ASN ASN A . n A 1 137 LYS 137 500 500 LYS LYS A . n A 1 138 PRO 138 501 501 PRO PRO A . n A 1 139 VAL 139 502 502 VAL VAL A . n A 1 140 THR 140 503 503 THR THR A . n A 1 141 ASN 141 504 504 ASN ASN A . n A 1 142 SER 142 505 505 SER SER A . n A 1 143 ARG 143 506 506 ARG ARG A . n A 1 144 ASP 144 507 507 ASP ASP A . n A 1 145 THR 145 508 508 THR THR A . n A 1 146 GLN 146 509 509 GLN GLN A . n A 1 147 GLU 147 510 510 GLU GLU A . n A 1 148 VAL 148 511 511 VAL VAL A . n A 1 149 PRO 149 512 512 PRO PRO A . n A 1 150 LEU 150 513 513 LEU LEU A . n A 1 151 GLU 151 514 514 GLU GLU A . n A 1 152 LYS 152 515 515 LYS LYS A . n A 1 153 ALA 153 516 516 ALA ALA A . n A 1 154 LYS 154 517 517 LYS LYS A . n A 1 155 GLN 155 518 518 GLN GLN A . n A 1 156 VAL 156 519 519 VAL VAL A . n A 1 157 LEU 157 520 520 LEU LEU A . n A 1 158 LYS 158 521 521 LYS LYS A . n A 1 159 ILE 159 522 522 ILE ILE A . n A 1 160 ILE 160 523 523 ILE ILE A . n A 1 161 SER 161 524 524 SER SER A . n A 1 162 SER 162 525 525 SER SER A . n A 1 163 TYR 163 526 526 TYR TYR A . n A 1 164 LYS 164 527 527 LYS LYS A . n A 1 165 HIS 165 528 528 HIS HIS A . n A 1 166 THR 166 529 529 THR THR A . n A 1 167 THR 167 530 530 THR THR A . n A 1 168 SER 168 531 531 SER SER A . n A 1 169 ILE 169 532 532 ILE ILE A . n A 1 170 PHE 170 533 533 PHE PHE A . n A 1 171 ASP 171 534 534 ASP ASP A . n A 1 172 ASP 172 535 535 ASP ASP A . n A 1 173 PHE 173 536 536 PHE PHE A . n A 1 174 ALA 174 537 537 ALA ALA A . n A 1 175 HIS 175 538 538 HIS HIS A . n A 1 176 TYR 176 539 539 TYR TYR A . n A 1 177 GLU 177 540 540 GLU GLU A . n A 1 178 LYS 178 541 541 LYS LYS A . n A 1 179 ARG 179 542 542 ARG ARG A . n A 1 180 GLN 180 543 543 GLN GLN A . n A 1 181 GLU 181 544 544 GLU GLU A . n A 1 182 GLU 182 545 545 GLU GLU A . n A 1 183 GLU 183 546 546 GLU GLU A . n A 1 184 GLU 184 547 547 GLU GLU A . n A 1 185 VAL 185 548 548 VAL VAL A . n A 1 186 VAL 186 549 549 VAL VAL A . n A 1 187 ARG 187 550 550 ARG ARG A . n A 1 188 LYS 188 551 551 LYS LYS A . n A 1 189 GLU 189 552 552 GLU GLU A . n A 1 190 ARG 190 553 ? ? ? A . n A 1 191 GLN 191 554 ? ? ? A . n B 2 1 G 1 1 1 G G B . n B 2 2 G 2 2 2 G G B . n B 2 3 6MZ 3 3 3 6MZ 6MZ B . n B 2 4 C 4 4 4 C C B . n B 2 5 U 5 5 5 U U B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UNX 1 601 601 UNX UNX A . D 3 UNX 1 602 602 UNX UNX A . E 3 UNX 1 603 603 UNX UNX A . F 3 UNX 1 604 604 UNX UNX A . G 3 UNX 1 605 605 UNX UNX A . H 3 UNX 1 606 606 UNX UNX A . I 3 UNX 1 607 607 UNX UNX A . J 4 HOH 1 701 701 HOH HOH A . J 4 HOH 2 702 702 HOH HOH A . J 4 HOH 3 703 703 HOH HOH A . J 4 HOH 4 704 704 HOH HOH A . J 4 HOH 5 705 705 HOH HOH A . J 4 HOH 6 706 706 HOH HOH A . J 4 HOH 7 707 707 HOH HOH A . J 4 HOH 8 708 708 HOH HOH A . J 4 HOH 9 709 709 HOH HOH A . J 4 HOH 10 710 710 HOH HOH A . J 4 HOH 11 711 711 HOH HOH A . J 4 HOH 12 712 712 HOH HOH A . J 4 HOH 13 713 713 HOH HOH A . J 4 HOH 14 714 714 HOH HOH A . J 4 HOH 15 715 715 HOH HOH A . J 4 HOH 16 716 716 HOH HOH A . J 4 HOH 17 717 717 HOH HOH A . J 4 HOH 18 718 718 HOH HOH A . J 4 HOH 19 719 719 HOH HOH A . J 4 HOH 20 720 720 HOH HOH A . J 4 HOH 21 721 721 HOH HOH A . J 4 HOH 22 722 722 HOH HOH A . J 4 HOH 23 723 723 HOH HOH A . J 4 HOH 24 724 724 HOH HOH A . J 4 HOH 25 725 725 HOH HOH A . J 4 HOH 26 726 726 HOH HOH A . J 4 HOH 27 727 727 HOH HOH A . J 4 HOH 28 728 728 HOH HOH A . J 4 HOH 29 729 729 HOH HOH A . J 4 HOH 30 730 730 HOH HOH A . J 4 HOH 31 731 731 HOH HOH A . J 4 HOH 32 732 732 HOH HOH A . J 4 HOH 33 733 733 HOH HOH A . J 4 HOH 34 734 734 HOH HOH A . J 4 HOH 35 735 735 HOH HOH A . J 4 HOH 36 736 736 HOH HOH A . J 4 HOH 37 737 737 HOH HOH A . J 4 HOH 38 738 738 HOH HOH A . J 4 HOH 39 739 739 HOH HOH A . J 4 HOH 40 740 740 HOH HOH A . J 4 HOH 41 741 741 HOH HOH A . J 4 HOH 42 742 742 HOH HOH A . J 4 HOH 43 743 743 HOH HOH A . J 4 HOH 44 744 744 HOH HOH A . J 4 HOH 45 745 745 HOH HOH A . J 4 HOH 46 746 746 HOH HOH A . J 4 HOH 47 747 747 HOH HOH A . J 4 HOH 48 748 748 HOH HOH A . J 4 HOH 49 749 749 HOH HOH A . J 4 HOH 50 750 750 HOH HOH A . J 4 HOH 51 751 751 HOH HOH A . J 4 HOH 52 752 752 HOH HOH A . J 4 HOH 53 753 753 HOH HOH A . J 4 HOH 54 754 754 HOH HOH A . J 4 HOH 55 755 755 HOH HOH A . J 4 HOH 56 756 756 HOH HOH A . J 4 HOH 57 757 757 HOH HOH A . J 4 HOH 58 758 758 HOH HOH A . J 4 HOH 59 759 759 HOH HOH A . J 4 HOH 60 760 760 HOH HOH A . J 4 HOH 61 761 761 HOH HOH A . J 4 HOH 62 762 762 HOH HOH A . J 4 HOH 63 763 763 HOH HOH A . J 4 HOH 64 764 764 HOH HOH A . J 4 HOH 65 765 765 HOH HOH A . J 4 HOH 66 766 766 HOH HOH A . J 4 HOH 67 767 767 HOH HOH A . J 4 HOH 68 768 768 HOH HOH A . J 4 HOH 69 769 769 HOH HOH A . J 4 HOH 70 770 770 HOH HOH A . J 4 HOH 71 771 771 HOH HOH A . J 4 HOH 72 772 772 HOH HOH A . J 4 HOH 73 773 773 HOH HOH A . J 4 HOH 74 774 774 HOH HOH A . J 4 HOH 75 775 775 HOH HOH A . J 4 HOH 76 776 776 HOH HOH A . J 4 HOH 77 777 777 HOH HOH A . J 4 HOH 78 778 778 HOH HOH A . J 4 HOH 79 779 779 HOH HOH A . J 4 HOH 80 780 780 HOH HOH A . J 4 HOH 81 781 781 HOH HOH A . J 4 HOH 82 782 782 HOH HOH A . J 4 HOH 83 783 783 HOH HOH A . J 4 HOH 84 784 784 HOH HOH A . J 4 HOH 85 785 785 HOH HOH A . J 4 HOH 86 786 786 HOH HOH A . J 4 HOH 87 787 787 HOH HOH A . J 4 HOH 88 788 788 HOH HOH A . J 4 HOH 89 789 789 HOH HOH A . J 4 HOH 90 790 790 HOH HOH A . J 4 HOH 91 791 791 HOH HOH A . J 4 HOH 92 792 792 HOH HOH A . J 4 HOH 93 793 793 HOH HOH A . J 4 HOH 94 794 794 HOH HOH A . J 4 HOH 95 795 795 HOH HOH A . J 4 HOH 96 796 796 HOH HOH A . J 4 HOH 97 797 797 HOH HOH A . J 4 HOH 98 798 798 HOH HOH A . J 4 HOH 99 799 799 HOH HOH A . J 4 HOH 100 800 800 HOH HOH A . J 4 HOH 101 801 801 HOH HOH A . J 4 HOH 102 802 802 HOH HOH A . J 4 HOH 103 803 803 HOH HOH A . J 4 HOH 104 804 804 HOH HOH A . J 4 HOH 105 805 805 HOH HOH A . J 4 HOH 106 806 806 HOH HOH A . J 4 HOH 107 807 807 HOH HOH A . J 4 HOH 108 808 808 HOH HOH A . J 4 HOH 109 809 809 HOH HOH A . J 4 HOH 110 810 810 HOH HOH A . J 4 HOH 111 811 811 HOH HOH A . J 4 HOH 112 812 812 HOH HOH A . J 4 HOH 113 813 813 HOH HOH A . J 4 HOH 114 814 814 HOH HOH A . J 4 HOH 115 815 815 HOH HOH A . J 4 HOH 116 816 816 HOH HOH A . J 4 HOH 117 817 817 HOH HOH A . J 4 HOH 118 818 818 HOH HOH A . J 4 HOH 119 819 819 HOH HOH A . J 4 HOH 120 820 820 HOH HOH A . J 4 HOH 121 821 821 HOH HOH A . J 4 HOH 122 822 822 HOH HOH A . J 4 HOH 123 823 823 HOH HOH A . J 4 HOH 124 824 824 HOH HOH A . J 4 HOH 125 825 825 HOH HOH A . J 4 HOH 126 826 826 HOH HOH A . J 4 HOH 127 827 827 HOH HOH A . J 4 HOH 128 828 828 HOH HOH A . J 4 HOH 129 829 829 HOH HOH A . J 4 HOH 130 830 830 HOH HOH A . J 4 HOH 131 831 831 HOH HOH A . J 4 HOH 132 832 832 HOH HOH A . J 4 HOH 133 833 833 HOH HOH A . J 4 HOH 134 834 834 HOH HOH A . J 4 HOH 135 835 835 HOH HOH A . J 4 HOH 136 836 836 HOH HOH A . J 4 HOH 137 837 837 HOH HOH A . J 4 HOH 138 838 838 HOH HOH A . J 4 HOH 139 839 839 HOH HOH A . J 4 HOH 140 840 840 HOH HOH A . J 4 HOH 141 841 841 HOH HOH A . J 4 HOH 142 842 842 HOH HOH A . J 4 HOH 143 843 843 HOH HOH A . J 4 HOH 144 844 844 HOH HOH A . J 4 HOH 145 845 845 HOH HOH A . J 4 HOH 146 846 846 HOH HOH A . J 4 HOH 147 847 847 HOH HOH A . J 4 HOH 148 848 848 HOH HOH A . J 4 HOH 149 849 849 HOH HOH A . J 4 HOH 150 850 850 HOH HOH A . J 4 HOH 151 851 851 HOH HOH A . J 4 HOH 152 852 852 HOH HOH A . J 4 HOH 153 853 853 HOH HOH A . J 4 HOH 154 854 854 HOH HOH A . J 4 HOH 155 855 855 HOH HOH A . J 4 HOH 156 856 856 HOH HOH A . J 4 HOH 157 857 857 HOH HOH A . J 4 HOH 158 858 858 HOH HOH A . J 4 HOH 159 859 859 HOH HOH A . J 4 HOH 160 860 860 HOH HOH A . J 4 HOH 161 861 861 HOH HOH A . J 4 HOH 162 862 862 HOH HOH A . J 4 HOH 163 863 863 HOH HOH A . K 4 HOH 1 101 101 HOH HOH B . K 4 HOH 2 102 102 HOH HOH B . K 4 HOH 3 103 103 HOH HOH B . K 4 HOH 4 104 104 HOH HOH B . K 4 HOH 5 105 105 HOH HOH B . K 4 HOH 6 106 106 HOH HOH B . K 4 HOH 7 107 107 HOH HOH B . K 4 HOH 8 108 108 HOH HOH B . K 4 HOH 9 109 109 HOH HOH B . K 4 HOH 10 110 110 HOH HOH B . K 4 HOH 11 111 111 HOH HOH B . K 4 HOH 12 112 112 HOH HOH B . K 4 HOH 13 113 113 HOH HOH B . K 4 HOH 14 114 114 HOH HOH B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id 6MZ _pdbx_struct_mod_residue.label_seq_id 3 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id 6MZ _pdbx_struct_mod_residue.auth_seq_id 3 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id A _pdbx_struct_mod_residue.details "N6-METHYLADENOSINE-5'-MONOPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-12 2 'Structure model' 1 1 2015-09-09 3 'Structure model' 1 2 2015-10-21 4 'Structure model' 2 0 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Polymer sequence' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' entity_poly 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 Aimless 0.3.6 21/05/14 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 G _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C4'" _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.61 _pdbx_validate_rmsd_angle.angle_target_value 109.80 _pdbx_validate_rmsd_angle.angle_deviation 6.81 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 376 ? ? -109.16 69.77 2 1 SER A 413 ? ? -112.45 -163.17 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 381 ? CG ? A GLU 18 CG 2 1 Y 1 A GLU 381 ? CD ? A GLU 18 CD 3 1 Y 1 A GLU 381 ? OE1 ? A GLU 18 OE1 4 1 Y 1 A GLU 381 ? OE2 ? A GLU 18 OE2 5 1 Y 1 A LYS 387 ? CD ? A LYS 24 CD 6 1 Y 1 A LYS 387 ? CE ? A LYS 24 CE 7 1 Y 1 A LYS 387 ? NZ ? A LYS 24 NZ 8 1 Y 1 A SER 430 ? OG ? A SER 67 OG 9 1 Y 1 A LYS 431 ? CG ? A LYS 68 CG 10 1 Y 1 A LYS 431 ? CD ? A LYS 68 CD 11 1 Y 1 A LYS 431 ? CE ? A LYS 68 CE 12 1 Y 1 A LYS 431 ? NZ ? A LYS 68 NZ 13 1 Y 1 A LYS 527 ? CD ? A LYS 164 CD 14 1 Y 1 A LYS 527 ? CE ? A LYS 164 CE 15 1 Y 1 A LYS 527 ? NZ ? A LYS 164 NZ 16 1 Y 1 A GLU 547 ? CD ? A GLU 184 CD 17 1 Y 1 A GLU 547 ? OE1 ? A GLU 184 OE1 18 1 Y 1 A GLU 547 ? OE2 ? A GLU 184 OE2 19 1 Y 1 A LYS 551 ? CD ? A LYS 188 CD 20 1 Y 1 A LYS 551 ? CE ? A LYS 188 CE 21 1 Y 1 A LYS 551 ? NZ ? A LYS 188 NZ 22 1 Y 1 A GLU 552 ? CG ? A GLU 189 CG 23 1 Y 1 A GLU 552 ? CD ? A GLU 189 CD 24 1 Y 1 A GLU 552 ? OE1 ? A GLU 189 OE1 25 1 Y 1 A GLU 552 ? OE2 ? A GLU 189 OE2 26 1 Y 1 B U 5 ? "C4'" ? B U 5 "C4'" 27 1 Y 1 B U 5 ? "O4'" ? B U 5 "O4'" 28 1 Y 1 B U 5 ? "C3'" ? B U 5 "C3'" 29 1 Y 1 B U 5 ? "O3'" ? B U 5 "O3'" 30 1 Y 1 B U 5 ? "C2'" ? B U 5 "C2'" 31 1 Y 1 B U 5 ? "O2'" ? B U 5 "O2'" 32 1 Y 1 B U 5 ? "C1'" ? B U 5 "C1'" 33 1 Y 1 B U 5 ? N1 ? B U 5 N1 34 1 Y 1 B U 5 ? C2 ? B U 5 C2 35 1 Y 1 B U 5 ? O2 ? B U 5 O2 36 1 Y 1 B U 5 ? N3 ? B U 5 N3 37 1 Y 1 B U 5 ? C4 ? B U 5 C4 38 1 Y 1 B U 5 ? O4 ? B U 5 O4 39 1 Y 1 B U 5 ? C5 ? B U 5 C5 40 1 Y 1 B U 5 ? C6 ? B U 5 C6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 364 ? A GLY 1 2 1 Y 1 A ARG 553 ? A ARG 190 3 1 Y 1 A GLN 554 ? A GLN 191 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6MZ C2 C Y N 1 6MZ C4 C Y N 2 6MZ C5 C Y N 3 6MZ O1P O N N 4 6MZ O2P O N N 5 6MZ N9 N Y N 6 6MZ N3 N Y N 7 6MZ N1 N Y N 8 6MZ C6 C Y N 9 6MZ N6 N N N 10 6MZ C9 C N N 11 6MZ N7 N Y N 12 6MZ C8 C Y N 13 6MZ "O5'" O N N 14 6MZ "C5'" C N N 15 6MZ "C4'" C N R 16 6MZ "O4'" O N N 17 6MZ "C1'" C N R 18 6MZ "C2'" C N R 19 6MZ "O2'" O N N 20 6MZ "C3'" C N S 21 6MZ "O3'" O N N 22 6MZ P P N N 23 6MZ O3P O N N 24 6MZ H2 H N N 25 6MZ H1P H N N 26 6MZ H8 H N N 27 6MZ "H1'" H N N 28 6MZ H9C1 H N N 29 6MZ H9C2 H N N 30 6MZ "H5'1" H N N 31 6MZ "H5'2" H N N 32 6MZ "H4'" H N N 33 6MZ "H3'" H N N 34 6MZ "H2'" H N N 35 6MZ HA H N N 36 6MZ HB H N N 37 6MZ H3P H N N 38 6MZ H6 H N N 39 6MZ H9 H N N 40 ALA N N N N 41 ALA CA C N S 42 ALA C C N N 43 ALA O O N N 44 ALA CB C N N 45 ALA OXT O N N 46 ALA H H N N 47 ALA H2 H N N 48 ALA HA H N N 49 ALA HB1 H N N 50 ALA HB2 H N N 51 ALA HB3 H N N 52 ALA HXT H N N 53 ARG N N N N 54 ARG CA C N S 55 ARG C C N N 56 ARG O O N N 57 ARG CB C N N 58 ARG CG C N N 59 ARG CD C N N 60 ARG NE N N N 61 ARG CZ C N N 62 ARG NH1 N N N 63 ARG NH2 N N N 64 ARG OXT O N N 65 ARG H H N N 66 ARG H2 H N N 67 ARG HA H N N 68 ARG HB2 H N N 69 ARG HB3 H N N 70 ARG HG2 H N N 71 ARG HG3 H N N 72 ARG HD2 H N N 73 ARG HD3 H N N 74 ARG HE H N N 75 ARG HH11 H N N 76 ARG HH12 H N N 77 ARG HH21 H N N 78 ARG HH22 H N N 79 ARG HXT H N N 80 ASN N N N N 81 ASN CA C N S 82 ASN C C N N 83 ASN O O N N 84 ASN CB C N N 85 ASN CG C N N 86 ASN OD1 O N N 87 ASN ND2 N N N 88 ASN OXT O N N 89 ASN H H N N 90 ASN H2 H N N 91 ASN HA H N N 92 ASN HB2 H N N 93 ASN HB3 H N N 94 ASN HD21 H N N 95 ASN HD22 H N N 96 ASN HXT H N N 97 ASP N N N N 98 ASP CA C N S 99 ASP C C N N 100 ASP O O N N 101 ASP CB C N N 102 ASP CG C N N 103 ASP OD1 O N N 104 ASP OD2 O N N 105 ASP OXT O N N 106 ASP H H N N 107 ASP H2 H N N 108 ASP HA H N N 109 ASP HB2 H N N 110 ASP HB3 H N N 111 ASP HD2 H N N 112 ASP HXT H N N 113 C OP3 O N N 114 C P P N N 115 C OP1 O N N 116 C OP2 O N N 117 C "O5'" O N N 118 C "C5'" C N N 119 C "C4'" C N R 120 C "O4'" O N N 121 C "C3'" C N S 122 C "O3'" O N N 123 C "C2'" C N R 124 C "O2'" O N N 125 C "C1'" C N R 126 C N1 N N N 127 C C2 C N N 128 C O2 O N N 129 C N3 N N N 130 C C4 C N N 131 C N4 N N N 132 C C5 C N N 133 C C6 C N N 134 C HOP3 H N N 135 C HOP2 H N N 136 C "H5'" H N N 137 C "H5''" H N N 138 C "H4'" H N N 139 C "H3'" H N N 140 C "HO3'" H N N 141 C "H2'" H N N 142 C "HO2'" H N N 143 C "H1'" H N N 144 C H41 H N N 145 C H42 H N N 146 C H5 H N N 147 C H6 H N N 148 CYS N N N N 149 CYS CA C N R 150 CYS C C N N 151 CYS O O N N 152 CYS CB C N N 153 CYS SG S N N 154 CYS OXT O N N 155 CYS H H N N 156 CYS H2 H N N 157 CYS HA H N N 158 CYS HB2 H N N 159 CYS HB3 H N N 160 CYS HG H N N 161 CYS HXT H N N 162 G OP3 O N N 163 G P P N N 164 G OP1 O N N 165 G OP2 O N N 166 G "O5'" O N N 167 G "C5'" C N N 168 G "C4'" C N R 169 G "O4'" O N N 170 G "C3'" C N S 171 G "O3'" O N N 172 G "C2'" C N R 173 G "O2'" O N N 174 G "C1'" C N R 175 G N9 N Y N 176 G C8 C Y N 177 G N7 N Y N 178 G C5 C Y N 179 G C6 C N N 180 G O6 O N N 181 G N1 N N N 182 G C2 C N N 183 G N2 N N N 184 G N3 N N N 185 G C4 C Y N 186 G HOP3 H N N 187 G HOP2 H N N 188 G "H5'" H N N 189 G "H5''" H N N 190 G "H4'" H N N 191 G "H3'" H N N 192 G "HO3'" H N N 193 G "H2'" H N N 194 G "HO2'" H N N 195 G "H1'" H N N 196 G H8 H N N 197 G H1 H N N 198 G H21 H N N 199 G H22 H N N 200 GLN N N N N 201 GLN CA C N S 202 GLN C C N N 203 GLN O O N N 204 GLN CB C N N 205 GLN CG C N N 206 GLN CD C N N 207 GLN OE1 O N N 208 GLN NE2 N N N 209 GLN OXT O N N 210 GLN H H N N 211 GLN H2 H N N 212 GLN HA H N N 213 GLN HB2 H N N 214 GLN HB3 H N N 215 GLN HG2 H N N 216 GLN HG3 H N N 217 GLN HE21 H N N 218 GLN HE22 H N N 219 GLN HXT H N N 220 GLU N N N N 221 GLU CA C N S 222 GLU C C N N 223 GLU O O N N 224 GLU CB C N N 225 GLU CG C N N 226 GLU CD C N N 227 GLU OE1 O N N 228 GLU OE2 O N N 229 GLU OXT O N N 230 GLU H H N N 231 GLU H2 H N N 232 GLU HA H N N 233 GLU HB2 H N N 234 GLU HB3 H N N 235 GLU HG2 H N N 236 GLU HG3 H N N 237 GLU HE2 H N N 238 GLU HXT H N N 239 GLY N N N N 240 GLY CA C N N 241 GLY C C N N 242 GLY O O N N 243 GLY OXT O N N 244 GLY H H N N 245 GLY H2 H N N 246 GLY HA2 H N N 247 GLY HA3 H N N 248 GLY HXT H N N 249 HIS N N N N 250 HIS CA C N S 251 HIS C C N N 252 HIS O O N N 253 HIS CB C N N 254 HIS CG C Y N 255 HIS ND1 N Y N 256 HIS CD2 C Y N 257 HIS CE1 C Y N 258 HIS NE2 N Y N 259 HIS OXT O N N 260 HIS H H N N 261 HIS H2 H N N 262 HIS HA H N N 263 HIS HB2 H N N 264 HIS HB3 H N N 265 HIS HD1 H N N 266 HIS HD2 H N N 267 HIS HE1 H N N 268 HIS HE2 H N N 269 HIS HXT H N N 270 HOH O O N N 271 HOH H1 H N N 272 HOH H2 H N N 273 ILE N N N N 274 ILE CA C N S 275 ILE C C N N 276 ILE O O N N 277 ILE CB C N S 278 ILE CG1 C N N 279 ILE CG2 C N N 280 ILE CD1 C N N 281 ILE OXT O N N 282 ILE H H N N 283 ILE H2 H N N 284 ILE HA H N N 285 ILE HB H N N 286 ILE HG12 H N N 287 ILE HG13 H N N 288 ILE HG21 H N N 289 ILE HG22 H N N 290 ILE HG23 H N N 291 ILE HD11 H N N 292 ILE HD12 H N N 293 ILE HD13 H N N 294 ILE HXT H N N 295 LEU N N N N 296 LEU CA C N S 297 LEU C C N N 298 LEU O O N N 299 LEU CB C N N 300 LEU CG C N N 301 LEU CD1 C N N 302 LEU CD2 C N N 303 LEU OXT O N N 304 LEU H H N N 305 LEU H2 H N N 306 LEU HA H N N 307 LEU HB2 H N N 308 LEU HB3 H N N 309 LEU HG H N N 310 LEU HD11 H N N 311 LEU HD12 H N N 312 LEU HD13 H N N 313 LEU HD21 H N N 314 LEU HD22 H N N 315 LEU HD23 H N N 316 LEU HXT H N N 317 LYS N N N N 318 LYS CA C N S 319 LYS C C N N 320 LYS O O N N 321 LYS CB C N N 322 LYS CG C N N 323 LYS CD C N N 324 LYS CE C N N 325 LYS NZ N N N 326 LYS OXT O N N 327 LYS H H N N 328 LYS H2 H N N 329 LYS HA H N N 330 LYS HB2 H N N 331 LYS HB3 H N N 332 LYS HG2 H N N 333 LYS HG3 H N N 334 LYS HD2 H N N 335 LYS HD3 H N N 336 LYS HE2 H N N 337 LYS HE3 H N N 338 LYS HZ1 H N N 339 LYS HZ2 H N N 340 LYS HZ3 H N N 341 LYS HXT H N N 342 MET N N N N 343 MET CA C N S 344 MET C C N N 345 MET O O N N 346 MET CB C N N 347 MET CG C N N 348 MET SD S N N 349 MET CE C N N 350 MET OXT O N N 351 MET H H N N 352 MET H2 H N N 353 MET HA H N N 354 MET HB2 H N N 355 MET HB3 H N N 356 MET HG2 H N N 357 MET HG3 H N N 358 MET HE1 H N N 359 MET HE2 H N N 360 MET HE3 H N N 361 MET HXT H N N 362 PHE N N N N 363 PHE CA C N S 364 PHE C C N N 365 PHE O O N N 366 PHE CB C N N 367 PHE CG C Y N 368 PHE CD1 C Y N 369 PHE CD2 C Y N 370 PHE CE1 C Y N 371 PHE CE2 C Y N 372 PHE CZ C Y N 373 PHE OXT O N N 374 PHE H H N N 375 PHE H2 H N N 376 PHE HA H N N 377 PHE HB2 H N N 378 PHE HB3 H N N 379 PHE HD1 H N N 380 PHE HD2 H N N 381 PHE HE1 H N N 382 PHE HE2 H N N 383 PHE HZ H N N 384 PHE HXT H N N 385 PRO N N N N 386 PRO CA C N S 387 PRO C C N N 388 PRO O O N N 389 PRO CB C N N 390 PRO CG C N N 391 PRO CD C N N 392 PRO OXT O N N 393 PRO H H N N 394 PRO HA H N N 395 PRO HB2 H N N 396 PRO HB3 H N N 397 PRO HG2 H N N 398 PRO HG3 H N N 399 PRO HD2 H N N 400 PRO HD3 H N N 401 PRO HXT H N N 402 SER N N N N 403 SER CA C N S 404 SER C C N N 405 SER O O N N 406 SER CB C N N 407 SER OG O N N 408 SER OXT O N N 409 SER H H N N 410 SER H2 H N N 411 SER HA H N N 412 SER HB2 H N N 413 SER HB3 H N N 414 SER HG H N N 415 SER HXT H N N 416 THR N N N N 417 THR CA C N S 418 THR C C N N 419 THR O O N N 420 THR CB C N R 421 THR OG1 O N N 422 THR CG2 C N N 423 THR OXT O N N 424 THR H H N N 425 THR H2 H N N 426 THR HA H N N 427 THR HB H N N 428 THR HG1 H N N 429 THR HG21 H N N 430 THR HG22 H N N 431 THR HG23 H N N 432 THR HXT H N N 433 TRP N N N N 434 TRP CA C N S 435 TRP C C N N 436 TRP O O N N 437 TRP CB C N N 438 TRP CG C Y N 439 TRP CD1 C Y N 440 TRP CD2 C Y N 441 TRP NE1 N Y N 442 TRP CE2 C Y N 443 TRP CE3 C Y N 444 TRP CZ2 C Y N 445 TRP CZ3 C Y N 446 TRP CH2 C Y N 447 TRP OXT O N N 448 TRP H H N N 449 TRP H2 H N N 450 TRP HA H N N 451 TRP HB2 H N N 452 TRP HB3 H N N 453 TRP HD1 H N N 454 TRP HE1 H N N 455 TRP HE3 H N N 456 TRP HZ2 H N N 457 TRP HZ3 H N N 458 TRP HH2 H N N 459 TRP HXT H N N 460 TYR N N N N 461 TYR CA C N S 462 TYR C C N N 463 TYR O O N N 464 TYR CB C N N 465 TYR CG C Y N 466 TYR CD1 C Y N 467 TYR CD2 C Y N 468 TYR CE1 C Y N 469 TYR CE2 C Y N 470 TYR CZ C Y N 471 TYR OH O N N 472 TYR OXT O N N 473 TYR H H N N 474 TYR H2 H N N 475 TYR HA H N N 476 TYR HB2 H N N 477 TYR HB3 H N N 478 TYR HD1 H N N 479 TYR HD2 H N N 480 TYR HE1 H N N 481 TYR HE2 H N N 482 TYR HH H N N 483 TYR HXT H N N 484 U OP3 O N N 485 U P P N N 486 U OP1 O N N 487 U OP2 O N N 488 U "O5'" O N N 489 U "C5'" C N N 490 U "C4'" C N R 491 U "O4'" O N N 492 U "C3'" C N S 493 U "O3'" O N N 494 U "C2'" C N R 495 U "O2'" O N N 496 U "C1'" C N R 497 U N1 N N N 498 U C2 C N N 499 U O2 O N N 500 U N3 N N N 501 U C4 C N N 502 U O4 O N N 503 U C5 C N N 504 U C6 C N N 505 U HOP3 H N N 506 U HOP2 H N N 507 U "H5'" H N N 508 U "H5''" H N N 509 U "H4'" H N N 510 U "H3'" H N N 511 U "HO3'" H N N 512 U "H2'" H N N 513 U "HO2'" H N N 514 U "H1'" H N N 515 U H3 H N N 516 U H5 H N N 517 U H6 H N N 518 VAL N N N N 519 VAL CA C N S 520 VAL C C N N 521 VAL O O N N 522 VAL CB C N N 523 VAL CG1 C N N 524 VAL CG2 C N N 525 VAL OXT O N N 526 VAL H H N N 527 VAL H2 H N N 528 VAL HA H N N 529 VAL HB H N N 530 VAL HG11 H N N 531 VAL HG12 H N N 532 VAL HG13 H N N 533 VAL HG21 H N N 534 VAL HG22 H N N 535 VAL HG23 H N N 536 VAL HXT H N N 537 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MZ C4 C5 sing Y N 1 6MZ C4 N9 sing Y N 2 6MZ C2 N3 sing Y N 3 6MZ C4 N3 doub Y N 4 6MZ C2 N1 doub Y N 5 6MZ C5 C6 doub Y N 6 6MZ N1 C6 sing Y N 7 6MZ C6 N6 sing N N 8 6MZ N6 C9 sing N N 9 6MZ C5 N7 sing Y N 10 6MZ N9 C8 sing Y N 11 6MZ N7 C8 doub Y N 12 6MZ "O5'" "C5'" sing N N 13 6MZ "C1'" "H1'" sing N N 14 6MZ C9 H9C1 sing N N 15 6MZ C9 H9C2 sing N N 16 6MZ "C5'" "H5'1" sing N N 17 6MZ "C5'" "H5'2" sing N N 18 6MZ "C4'" "H4'" sing N N 19 6MZ "C3'" "H3'" sing N N 20 6MZ "C2'" "H2'" sing N N 21 6MZ "O2'" HA sing N N 22 6MZ "O3'" HB sing N N 23 6MZ O3P H3P sing N N 24 6MZ "C5'" "C4'" sing N N 25 6MZ "C4'" "O4'" sing N N 26 6MZ N9 "C1'" sing N N 27 6MZ "O4'" "C1'" sing N N 28 6MZ "C1'" "C2'" sing N N 29 6MZ "C2'" "O2'" sing N N 30 6MZ "C4'" "C3'" sing N N 31 6MZ "C2'" "C3'" sing N N 32 6MZ "C3'" "O3'" sing N N 33 6MZ O1P P sing N N 34 6MZ O2P P doub N N 35 6MZ "O5'" P sing N N 36 6MZ P O3P sing N N 37 6MZ C2 H2 sing N N 38 6MZ O1P H1P sing N N 39 6MZ C8 H8 sing N N 40 6MZ N6 H6 sing N N 41 6MZ C9 H9 sing N N 42 ALA N CA sing N N 43 ALA N H sing N N 44 ALA N H2 sing N N 45 ALA CA C sing N N 46 ALA CA CB sing N N 47 ALA CA HA sing N N 48 ALA C O doub N N 49 ALA C OXT sing N N 50 ALA CB HB1 sing N N 51 ALA CB HB2 sing N N 52 ALA CB HB3 sing N N 53 ALA OXT HXT sing N N 54 ARG N CA sing N N 55 ARG N H sing N N 56 ARG N H2 sing N N 57 ARG CA C sing N N 58 ARG CA CB sing N N 59 ARG CA HA sing N N 60 ARG C O doub N N 61 ARG C OXT sing N N 62 ARG CB CG sing N N 63 ARG CB HB2 sing N N 64 ARG CB HB3 sing N N 65 ARG CG CD sing N N 66 ARG CG HG2 sing N N 67 ARG CG HG3 sing N N 68 ARG CD NE sing N N 69 ARG CD HD2 sing N N 70 ARG CD HD3 sing N N 71 ARG NE CZ sing N N 72 ARG NE HE sing N N 73 ARG CZ NH1 sing N N 74 ARG CZ NH2 doub N N 75 ARG NH1 HH11 sing N N 76 ARG NH1 HH12 sing N N 77 ARG NH2 HH21 sing N N 78 ARG NH2 HH22 sing N N 79 ARG OXT HXT sing N N 80 ASN N CA sing N N 81 ASN N H sing N N 82 ASN N H2 sing N N 83 ASN CA C sing N N 84 ASN CA CB sing N N 85 ASN CA HA sing N N 86 ASN C O doub N N 87 ASN C OXT sing N N 88 ASN CB CG sing N N 89 ASN CB HB2 sing N N 90 ASN CB HB3 sing N N 91 ASN CG OD1 doub N N 92 ASN CG ND2 sing N N 93 ASN ND2 HD21 sing N N 94 ASN ND2 HD22 sing N N 95 ASN OXT HXT sing N N 96 ASP N CA sing N N 97 ASP N H sing N N 98 ASP N H2 sing N N 99 ASP CA C sing N N 100 ASP CA CB sing N N 101 ASP CA HA sing N N 102 ASP C O doub N N 103 ASP C OXT sing N N 104 ASP CB CG sing N N 105 ASP CB HB2 sing N N 106 ASP CB HB3 sing N N 107 ASP CG OD1 doub N N 108 ASP CG OD2 sing N N 109 ASP OD2 HD2 sing N N 110 ASP OXT HXT sing N N 111 C OP3 P sing N N 112 C OP3 HOP3 sing N N 113 C P OP1 doub N N 114 C P OP2 sing N N 115 C P "O5'" sing N N 116 C OP2 HOP2 sing N N 117 C "O5'" "C5'" sing N N 118 C "C5'" "C4'" sing N N 119 C "C5'" "H5'" sing N N 120 C "C5'" "H5''" sing N N 121 C "C4'" "O4'" sing N N 122 C "C4'" "C3'" sing N N 123 C "C4'" "H4'" sing N N 124 C "O4'" "C1'" sing N N 125 C "C3'" "O3'" sing N N 126 C "C3'" "C2'" sing N N 127 C "C3'" "H3'" sing N N 128 C "O3'" "HO3'" sing N N 129 C "C2'" "O2'" sing N N 130 C "C2'" "C1'" sing N N 131 C "C2'" "H2'" sing N N 132 C "O2'" "HO2'" sing N N 133 C "C1'" N1 sing N N 134 C "C1'" "H1'" sing N N 135 C N1 C2 sing N N 136 C N1 C6 sing N N 137 C C2 O2 doub N N 138 C C2 N3 sing N N 139 C N3 C4 doub N N 140 C C4 N4 sing N N 141 C C4 C5 sing N N 142 C N4 H41 sing N N 143 C N4 H42 sing N N 144 C C5 C6 doub N N 145 C C5 H5 sing N N 146 C C6 H6 sing N N 147 CYS N CA sing N N 148 CYS N H sing N N 149 CYS N H2 sing N N 150 CYS CA C sing N N 151 CYS CA CB sing N N 152 CYS CA HA sing N N 153 CYS C O doub N N 154 CYS C OXT sing N N 155 CYS CB SG sing N N 156 CYS CB HB2 sing N N 157 CYS CB HB3 sing N N 158 CYS SG HG sing N N 159 CYS OXT HXT sing N N 160 G OP3 P sing N N 161 G OP3 HOP3 sing N N 162 G P OP1 doub N N 163 G P OP2 sing N N 164 G P "O5'" sing N N 165 G OP2 HOP2 sing N N 166 G "O5'" "C5'" sing N N 167 G "C5'" "C4'" sing N N 168 G "C5'" "H5'" sing N N 169 G "C5'" "H5''" sing N N 170 G "C4'" "O4'" sing N N 171 G "C4'" "C3'" sing N N 172 G "C4'" "H4'" sing N N 173 G "O4'" "C1'" sing N N 174 G "C3'" "O3'" sing N N 175 G "C3'" "C2'" sing N N 176 G "C3'" "H3'" sing N N 177 G "O3'" "HO3'" sing N N 178 G "C2'" "O2'" sing N N 179 G "C2'" "C1'" sing N N 180 G "C2'" "H2'" sing N N 181 G "O2'" "HO2'" sing N N 182 G "C1'" N9 sing N N 183 G "C1'" "H1'" sing N N 184 G N9 C8 sing Y N 185 G N9 C4 sing Y N 186 G C8 N7 doub Y N 187 G C8 H8 sing N N 188 G N7 C5 sing Y N 189 G C5 C6 sing N N 190 G C5 C4 doub Y N 191 G C6 O6 doub N N 192 G C6 N1 sing N N 193 G N1 C2 sing N N 194 G N1 H1 sing N N 195 G C2 N2 sing N N 196 G C2 N3 doub N N 197 G N2 H21 sing N N 198 G N2 H22 sing N N 199 G N3 C4 sing N N 200 GLN N CA sing N N 201 GLN N H sing N N 202 GLN N H2 sing N N 203 GLN CA C sing N N 204 GLN CA CB sing N N 205 GLN CA HA sing N N 206 GLN C O doub N N 207 GLN C OXT sing N N 208 GLN CB CG sing N N 209 GLN CB HB2 sing N N 210 GLN CB HB3 sing N N 211 GLN CG CD sing N N 212 GLN CG HG2 sing N N 213 GLN CG HG3 sing N N 214 GLN CD OE1 doub N N 215 GLN CD NE2 sing N N 216 GLN NE2 HE21 sing N N 217 GLN NE2 HE22 sing N N 218 GLN OXT HXT sing N N 219 GLU N CA sing N N 220 GLU N H sing N N 221 GLU N H2 sing N N 222 GLU CA C sing N N 223 GLU CA CB sing N N 224 GLU CA HA sing N N 225 GLU C O doub N N 226 GLU C OXT sing N N 227 GLU CB CG sing N N 228 GLU CB HB2 sing N N 229 GLU CB HB3 sing N N 230 GLU CG CD sing N N 231 GLU CG HG2 sing N N 232 GLU CG HG3 sing N N 233 GLU CD OE1 doub N N 234 GLU CD OE2 sing N N 235 GLU OE2 HE2 sing N N 236 GLU OXT HXT sing N N 237 GLY N CA sing N N 238 GLY N H sing N N 239 GLY N H2 sing N N 240 GLY CA C sing N N 241 GLY CA HA2 sing N N 242 GLY CA HA3 sing N N 243 GLY C O doub N N 244 GLY C OXT sing N N 245 GLY OXT HXT sing N N 246 HIS N CA sing N N 247 HIS N H sing N N 248 HIS N H2 sing N N 249 HIS CA C sing N N 250 HIS CA CB sing N N 251 HIS CA HA sing N N 252 HIS C O doub N N 253 HIS C OXT sing N N 254 HIS CB CG sing N N 255 HIS CB HB2 sing N N 256 HIS CB HB3 sing N N 257 HIS CG ND1 sing Y N 258 HIS CG CD2 doub Y N 259 HIS ND1 CE1 doub Y N 260 HIS ND1 HD1 sing N N 261 HIS CD2 NE2 sing Y N 262 HIS CD2 HD2 sing N N 263 HIS CE1 NE2 sing Y N 264 HIS CE1 HE1 sing N N 265 HIS NE2 HE2 sing N N 266 HIS OXT HXT sing N N 267 HOH O H1 sing N N 268 HOH O H2 sing N N 269 ILE N CA sing N N 270 ILE N H sing N N 271 ILE N H2 sing N N 272 ILE CA C sing N N 273 ILE CA CB sing N N 274 ILE CA HA sing N N 275 ILE C O doub N N 276 ILE C OXT sing N N 277 ILE CB CG1 sing N N 278 ILE CB CG2 sing N N 279 ILE CB HB sing N N 280 ILE CG1 CD1 sing N N 281 ILE CG1 HG12 sing N N 282 ILE CG1 HG13 sing N N 283 ILE CG2 HG21 sing N N 284 ILE CG2 HG22 sing N N 285 ILE CG2 HG23 sing N N 286 ILE CD1 HD11 sing N N 287 ILE CD1 HD12 sing N N 288 ILE CD1 HD13 sing N N 289 ILE OXT HXT sing N N 290 LEU N CA sing N N 291 LEU N H sing N N 292 LEU N H2 sing N N 293 LEU CA C sing N N 294 LEU CA CB sing N N 295 LEU CA HA sing N N 296 LEU C O doub N N 297 LEU C OXT sing N N 298 LEU CB CG sing N N 299 LEU CB HB2 sing N N 300 LEU CB HB3 sing N N 301 LEU CG CD1 sing N N 302 LEU CG CD2 sing N N 303 LEU CG HG sing N N 304 LEU CD1 HD11 sing N N 305 LEU CD1 HD12 sing N N 306 LEU CD1 HD13 sing N N 307 LEU CD2 HD21 sing N N 308 LEU CD2 HD22 sing N N 309 LEU CD2 HD23 sing N N 310 LEU OXT HXT sing N N 311 LYS N CA sing N N 312 LYS N H sing N N 313 LYS N H2 sing N N 314 LYS CA C sing N N 315 LYS CA CB sing N N 316 LYS CA HA sing N N 317 LYS C O doub N N 318 LYS C OXT sing N N 319 LYS CB CG sing N N 320 LYS CB HB2 sing N N 321 LYS CB HB3 sing N N 322 LYS CG CD sing N N 323 LYS CG HG2 sing N N 324 LYS CG HG3 sing N N 325 LYS CD CE sing N N 326 LYS CD HD2 sing N N 327 LYS CD HD3 sing N N 328 LYS CE NZ sing N N 329 LYS CE HE2 sing N N 330 LYS CE HE3 sing N N 331 LYS NZ HZ1 sing N N 332 LYS NZ HZ2 sing N N 333 LYS NZ HZ3 sing N N 334 LYS OXT HXT sing N N 335 MET N CA sing N N 336 MET N H sing N N 337 MET N H2 sing N N 338 MET CA C sing N N 339 MET CA CB sing N N 340 MET CA HA sing N N 341 MET C O doub N N 342 MET C OXT sing N N 343 MET CB CG sing N N 344 MET CB HB2 sing N N 345 MET CB HB3 sing N N 346 MET CG SD sing N N 347 MET CG HG2 sing N N 348 MET CG HG3 sing N N 349 MET SD CE sing N N 350 MET CE HE1 sing N N 351 MET CE HE2 sing N N 352 MET CE HE3 sing N N 353 MET OXT HXT sing N N 354 PHE N CA sing N N 355 PHE N H sing N N 356 PHE N H2 sing N N 357 PHE CA C sing N N 358 PHE CA CB sing N N 359 PHE CA HA sing N N 360 PHE C O doub N N 361 PHE C OXT sing N N 362 PHE CB CG sing N N 363 PHE CB HB2 sing N N 364 PHE CB HB3 sing N N 365 PHE CG CD1 doub Y N 366 PHE CG CD2 sing Y N 367 PHE CD1 CE1 sing Y N 368 PHE CD1 HD1 sing N N 369 PHE CD2 CE2 doub Y N 370 PHE CD2 HD2 sing N N 371 PHE CE1 CZ doub Y N 372 PHE CE1 HE1 sing N N 373 PHE CE2 CZ sing Y N 374 PHE CE2 HE2 sing N N 375 PHE CZ HZ sing N N 376 PHE OXT HXT sing N N 377 PRO N CA sing N N 378 PRO N CD sing N N 379 PRO N H sing N N 380 PRO CA C sing N N 381 PRO CA CB sing N N 382 PRO CA HA sing N N 383 PRO C O doub N N 384 PRO C OXT sing N N 385 PRO CB CG sing N N 386 PRO CB HB2 sing N N 387 PRO CB HB3 sing N N 388 PRO CG CD sing N N 389 PRO CG HG2 sing N N 390 PRO CG HG3 sing N N 391 PRO CD HD2 sing N N 392 PRO CD HD3 sing N N 393 PRO OXT HXT sing N N 394 SER N CA sing N N 395 SER N H sing N N 396 SER N H2 sing N N 397 SER CA C sing N N 398 SER CA CB sing N N 399 SER CA HA sing N N 400 SER C O doub N N 401 SER C OXT sing N N 402 SER CB OG sing N N 403 SER CB HB2 sing N N 404 SER CB HB3 sing N N 405 SER OG HG sing N N 406 SER OXT HXT sing N N 407 THR N CA sing N N 408 THR N H sing N N 409 THR N H2 sing N N 410 THR CA C sing N N 411 THR CA CB sing N N 412 THR CA HA sing N N 413 THR C O doub N N 414 THR C OXT sing N N 415 THR CB OG1 sing N N 416 THR CB CG2 sing N N 417 THR CB HB sing N N 418 THR OG1 HG1 sing N N 419 THR CG2 HG21 sing N N 420 THR CG2 HG22 sing N N 421 THR CG2 HG23 sing N N 422 THR OXT HXT sing N N 423 TRP N CA sing N N 424 TRP N H sing N N 425 TRP N H2 sing N N 426 TRP CA C sing N N 427 TRP CA CB sing N N 428 TRP CA HA sing N N 429 TRP C O doub N N 430 TRP C OXT sing N N 431 TRP CB CG sing N N 432 TRP CB HB2 sing N N 433 TRP CB HB3 sing N N 434 TRP CG CD1 doub Y N 435 TRP CG CD2 sing Y N 436 TRP CD1 NE1 sing Y N 437 TRP CD1 HD1 sing N N 438 TRP CD2 CE2 doub Y N 439 TRP CD2 CE3 sing Y N 440 TRP NE1 CE2 sing Y N 441 TRP NE1 HE1 sing N N 442 TRP CE2 CZ2 sing Y N 443 TRP CE3 CZ3 doub Y N 444 TRP CE3 HE3 sing N N 445 TRP CZ2 CH2 doub Y N 446 TRP CZ2 HZ2 sing N N 447 TRP CZ3 CH2 sing Y N 448 TRP CZ3 HZ3 sing N N 449 TRP CH2 HH2 sing N N 450 TRP OXT HXT sing N N 451 TYR N CA sing N N 452 TYR N H sing N N 453 TYR N H2 sing N N 454 TYR CA C sing N N 455 TYR CA CB sing N N 456 TYR CA HA sing N N 457 TYR C O doub N N 458 TYR C OXT sing N N 459 TYR CB CG sing N N 460 TYR CB HB2 sing N N 461 TYR CB HB3 sing N N 462 TYR CG CD1 doub Y N 463 TYR CG CD2 sing Y N 464 TYR CD1 CE1 sing Y N 465 TYR CD1 HD1 sing N N 466 TYR CD2 CE2 doub Y N 467 TYR CD2 HD2 sing N N 468 TYR CE1 CZ doub Y N 469 TYR CE1 HE1 sing N N 470 TYR CE2 CZ sing Y N 471 TYR CE2 HE2 sing N N 472 TYR CZ OH sing N N 473 TYR OH HH sing N N 474 TYR OXT HXT sing N N 475 U OP3 P sing N N 476 U OP3 HOP3 sing N N 477 U P OP1 doub N N 478 U P OP2 sing N N 479 U P "O5'" sing N N 480 U OP2 HOP2 sing N N 481 U "O5'" "C5'" sing N N 482 U "C5'" "C4'" sing N N 483 U "C5'" "H5'" sing N N 484 U "C5'" "H5''" sing N N 485 U "C4'" "O4'" sing N N 486 U "C4'" "C3'" sing N N 487 U "C4'" "H4'" sing N N 488 U "O4'" "C1'" sing N N 489 U "C3'" "O3'" sing N N 490 U "C3'" "C2'" sing N N 491 U "C3'" "H3'" sing N N 492 U "O3'" "HO3'" sing N N 493 U "C2'" "O2'" sing N N 494 U "C2'" "C1'" sing N N 495 U "C2'" "H2'" sing N N 496 U "O2'" "HO2'" sing N N 497 U "C1'" N1 sing N N 498 U "C1'" "H1'" sing N N 499 U N1 C2 sing N N 500 U N1 C6 sing N N 501 U C2 O2 doub N N 502 U C2 N3 sing N N 503 U N3 C4 sing N N 504 U N3 H3 sing N N 505 U C4 O4 doub N N 506 U C4 C5 sing N N 507 U C5 C6 doub N N 508 U C5 H5 sing N N 509 U C6 H6 sing N N 510 VAL N CA sing N N 511 VAL N H sing N N 512 VAL N H2 sing N N 513 VAL CA C sing N N 514 VAL CA CB sing N N 515 VAL CA HA sing N N 516 VAL C O doub N N 517 VAL C OXT sing N N 518 VAL CB CG1 sing N N 519 VAL CB CG2 sing N N 520 VAL CB HB sing N N 521 VAL CG1 HG11 sing N N 522 VAL CG1 HG12 sing N N 523 VAL CG1 HG13 sing N N 524 VAL CG2 HG21 sing N N 525 VAL CG2 HG22 sing N N 526 VAL CG2 HG23 sing N N 527 VAL OXT HXT sing N N 528 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4RCI _pdbx_initial_refinement_model.details 'PDB entry 4RCI' #