data_4RCM # _entry.id 4RCM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RCM pdb_00004rcm 10.2210/pdb4rcm/pdb NDB NA3295 ? ? RCSB RCSB087179 ? ? WWPDB D_1000087179 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4RCI . unspecified PDB 4RCJ . unspecified # _pdbx_database_status.entry_id 4RCM _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-09-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tempel, W.' 1 'Xu, C.' 2 'Bountra, C.' 3 'Arrowsmith, C.H.' 4 'Edwards, A.M.' 5 'Min, J.' 6 'Structural Genomics Consortium (SGC)' 7 # _citation.id primary _citation.title ;Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 290 _citation.page_first 24902 _citation.page_last 24913 _citation.year 2015 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26318451 _citation.pdbx_database_id_DOI 10.1074/jbc.M115.680389 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, C.' 1 ? primary 'Liu, K.' 2 ? primary 'Ahmed, H.' 3 ? primary 'Loppnau, P.' 4 ? primary 'Schapira, M.' 5 ? primary 'Min, J.' 6 ? # _cell.entry_id 4RCM _cell.length_a 41.430 _cell.length_b 57.171 _cell.length_c 66.725 _cell.angle_alpha 90.00 _cell.angle_beta 103.08 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RCM _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Methylated RNA-binding protein 1' 19313.057 2 ? ? 'UNP residues 141-306' ? 2 polymer syn ;RNA (5'-R(*UP*G)-D(*(6MZ)P*CP*U)-3') ; 1560.995 2 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 19 ? ? ? ? 4 water nat water 18.015 98 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PHOsphate metabolism protein 92, YTH domain-containing protein PHO92' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSAAIIPPWLNIPENSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCGVAEMV SDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFS FLDETYE ; ;GSAAIIPPWLNIPENSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCGVAEMV SDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFS FLDETYE ; A,B ? 2 polyribonucleotide no yes 'UG(6MZ)CU' UGACU D,E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 ALA n 1 5 ILE n 1 6 ILE n 1 7 PRO n 1 8 PRO n 1 9 TRP n 1 10 LEU n 1 11 ASN n 1 12 ILE n 1 13 PRO n 1 14 GLU n 1 15 ASN n 1 16 SER n 1 17 ARG n 1 18 PHE n 1 19 PHE n 1 20 VAL n 1 21 ILE n 1 22 LYS n 1 23 SER n 1 24 SER n 1 25 SER n 1 26 LEU n 1 27 LYS n 1 28 HIS n 1 29 VAL n 1 30 LYS n 1 31 ARG n 1 32 SER n 1 33 PHE n 1 34 TYR n 1 35 ASN n 1 36 GLY n 1 37 ILE n 1 38 TRP n 1 39 SER n 1 40 SER n 1 41 THR n 1 42 HIS n 1 43 PHE n 1 44 GLY n 1 45 ASN n 1 46 LYS n 1 47 ARG n 1 48 LEU n 1 49 SER n 1 50 GLU n 1 51 ALA n 1 52 TYR n 1 53 LYS n 1 54 LYS n 1 55 LEU n 1 56 ASN n 1 57 SER n 1 58 GLY n 1 59 ALA n 1 60 LYS n 1 61 VAL n 1 62 PHE n 1 63 LEU n 1 64 PHE n 1 65 PHE n 1 66 SER n 1 67 ILE n 1 68 ASN n 1 69 THR n 1 70 SER n 1 71 GLY n 1 72 ARG n 1 73 PHE n 1 74 CYS n 1 75 GLY n 1 76 VAL n 1 77 ALA n 1 78 GLU n 1 79 MET n 1 80 VAL n 1 81 SER n 1 82 ASP n 1 83 LEU n 1 84 LYS n 1 85 MET n 1 86 ASP n 1 87 LEU n 1 88 ASP n 1 89 THR n 1 90 SER n 1 91 ILE n 1 92 TRP n 1 93 GLU n 1 94 ASP n 1 95 GLU n 1 96 GLN n 1 97 LYS n 1 98 TYR n 1 99 GLY n 1 100 LYS n 1 101 ALA n 1 102 PHE n 1 103 LYS n 1 104 VAL n 1 105 ARG n 1 106 TRP n 1 107 VAL n 1 108 ILE n 1 109 VAL n 1 110 ARG n 1 111 ASP n 1 112 ILE n 1 113 ASN n 1 114 ASN n 1 115 ARG n 1 116 SER n 1 117 LEU n 1 118 LYS n 1 119 ARG n 1 120 PHE n 1 121 LEU n 1 122 ILE n 1 123 PRO n 1 124 SER n 1 125 ASN n 1 126 GLU n 1 127 MET n 1 128 LYS n 1 129 PRO n 1 130 ILE n 1 131 THR n 1 132 HIS n 1 133 SER n 1 134 ARG n 1 135 ASP n 1 136 THR n 1 137 GLN n 1 138 GLU n 1 139 ILE n 1 140 PRO n 1 141 TYR n 1 142 SER n 1 143 ILE n 1 144 GLY n 1 145 ILE n 1 146 SER n 1 147 ILE n 1 148 ILE n 1 149 ASN n 1 150 LEU n 1 151 PHE n 1 152 LYS n 1 153 THR n 1 154 GLN n 1 155 ASP n 1 156 SER n 1 157 ASP n 1 158 ILE n 1 159 PHE n 1 160 SER n 1 161 PHE n 1 162 LEU n 1 163 ASP n 1 164 GLU n 1 165 THR n 1 166 TYR n 1 167 GLU n 2 1 U n 2 2 G n 2 3 6MZ n 2 4 C n 2 5 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PHO92, MRB1, YDR374C' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae S288c' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-V2R-pRARE2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MRB1_YEAST Q06390 1 ;SAAIIPPWLNIPENSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCGVAEMVS DLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDSDIFSF LDETYE ; 141 ? 2 PDB 4RCM 4RCM 2 UGNCU ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RCM A 2 ? 167 ? Q06390 141 ? 306 ? 141 306 2 1 4RCM B 2 ? 167 ? Q06390 141 ? 306 ? 141 306 3 2 4RCM D 1 ? 5 ? 4RCM 1 ? 5 ? 1 5 4 2 4RCM E 1 ? 5 ? 4RCM 1 ? 5 ? 1 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RCM GLY A 1 ? UNP Q06390 ? ? 'expression tag' 140 1 2 4RCM GLY B 1 ? UNP Q06390 ? ? 'expression tag' 140 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6MZ 'RNA linking' n "N6-METHYLADENOSINE-5'-MONOPHOSPHATE" ? 'C11 H16 N5 O7 P' 361.248 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4RCM _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 33.29 _exptl_crystal.density_Matthews 1.84 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '20% PEG-3350, 0.2 M potassium isocyanate, vapor diffusion, sitting drop, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS' _diffrn_detector.pdbx_collection_date 2014-04-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E DW' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4RCM _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 38.400 _reflns.number_obs 27985 _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.pdbx_netI_over_sigmaI 10.900 _reflns.pdbx_redundancy 3.600 _reflns.percent_possible_obs 99.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.800 1.840 ? 4918 ? 0.391 4.100 ? ? 3.300 ? 1511 92.900 1 1 9.010 38.400 ? 791 ? 0.029 35.300 ? ? 3.300 ? 243 97.500 2 1 # _refine.entry_id 4RCM _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 32.97 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.3500 _refine.ls_number_reflns_obs 27964 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details 'THIN SHELLS (SFTOOLS)' _refine.details ;AN ENSEMBLE OF CRYSTALLOGRAPHIC MODELS OF HUMAN YTHDC1 AND YTHDF1 WAS USED AS SEARCH MODEL FOR MOLECULAR REPLACEMENT. PARROT WAS USED FOR DENSITY MODIFICATION. ARP/WARP WAS USED FOR PHASE IMPROVEMENT AND AUTOMATED MODEL BUILDING. COOT WAS USED FOR INTERACTIVE MODEL BUILDING. MODEL GEOMETRY WAS EVALUATED WITH MOLPROBITY. ; _refine.ls_R_factor_obs 0.2200 _refine.ls_R_factor_R_work 0.2180 _refine.ls_wR_factor_R_work 0.1999 _refine.ls_R_factor_R_free 0.2681 _refine.ls_wR_factor_R_free 0.2485 _refine.ls_percent_reflns_R_free 4.1000 _refine.ls_number_reflns_R_free 1149 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 19.2124 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.9400 _refine.aniso_B[2][2] -1.5900 _refine.aniso_B[3][3] -0.3800 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.1300 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9370 _refine.correlation_coeff_Fo_to_Fc_free 0.8950 _refine.overall_SU_R_Cruickshank_DPI 0.1674 _refine.overall_SU_R_free 0.1578 _refine.pdbx_overall_ESU_R 0.1670 _refine.pdbx_overall_ESU_R_Free 0.1580 _refine.overall_SU_ML 0.1430 _refine.overall_SU_B 4.9120 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRIES 4R3H AND 4RCI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7470 _refine.B_iso_max 66.600 _refine.B_iso_min 2.000 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.ls_R_factor_all ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2544 _refine_hist.pdbx_number_atoms_nucleic_acid 40 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 2701 _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 32.97 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2732 0.016 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 2534 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3723 1.595 1.949 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 5828 0.838 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 345 6.505 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 118 35.560 23.305 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 453 14.296 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15 14.850 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 413 0.101 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 3081 0.007 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 676 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1314 2.136 1.842 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 1313 2.135 1.840 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1645 3.230 2.743 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.8500 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.1700 _refine_ls_shell.number_reflns_R_work 1921 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.4230 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4RCM _struct.title 'Crystal structure of the Pho92 YTH domain in complex with m6A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RCM _struct_keywords.text 'Structural Genomics, Structural Genomics Consortium, SGC, RNA BINDING PROTEIN-RNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 3 ? V N N 3 ? W N N 3 ? X N N 4 ? Y N N 4 ? # _struct_biol.id 1 _struct_biol.details 'AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 25 ? GLY A 36 ? SER A 164 GLY A 175 1 ? 12 HELX_P HELX_P2 2 THR A 41 ? LYS A 54 ? THR A 180 LYS A 193 1 ? 14 HELX_P HELX_P3 3 ASP A 88 ? TRP A 92 ? ASP A 227 TRP A 231 5 ? 5 HELX_P HELX_P4 4 ASP A 94 ? TYR A 98 ? ASP A 233 TYR A 237 5 ? 5 HELX_P HELX_P5 5 ASN A 113 ? LYS A 118 ? ASN A 252 LYS A 257 1 ? 6 HELX_P HELX_P6 6 PRO A 129 ? SER A 133 ? PRO A 268 SER A 272 5 ? 5 HELX_P HELX_P7 7 PRO A 140 ? LYS A 152 ? PRO A 279 LYS A 291 1 ? 13 HELX_P HELX_P8 8 SER B 25 ? GLY B 36 ? SER B 164 GLY B 175 1 ? 12 HELX_P HELX_P9 9 THR B 41 ? LYS B 54 ? THR B 180 LYS B 193 1 ? 14 HELX_P HELX_P10 10 ASP B 88 ? TRP B 92 ? ASP B 227 TRP B 231 5 ? 5 HELX_P HELX_P11 11 ASP B 94 ? TYR B 98 ? ASP B 233 TYR B 237 5 ? 5 HELX_P HELX_P12 12 ASN B 113 ? LYS B 118 ? ASN B 252 LYS B 257 1 ? 6 HELX_P HELX_P13 13 ILE B 122 ? GLU B 126 ? ILE B 261 GLU B 265 5 ? 5 HELX_P HELX_P14 14 PRO B 129 ? SER B 133 ? PRO B 268 SER B 272 5 ? 5 HELX_P HELX_P15 15 PRO B 140 ? LYS B 152 ? PRO B 279 LYS B 291 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 37 ? TRP A 38 ? ILE A 176 TRP A 177 A 2 PHE A 102 ? ILE A 112 ? PHE A 241 ILE A 251 A 3 ARG A 72 ? MET A 79 ? ARG A 211 MET A 218 A 4 VAL A 61 ? ILE A 67 ? VAL A 200 ILE A 206 A 5 ARG A 17 ? SER A 23 ? ARG A 156 SER A 162 A 6 GLU A 138 ? ILE A 139 ? GLU A 277 ILE A 278 B 1 ILE B 37 ? TRP B 38 ? ILE B 176 TRP B 177 B 2 PHE B 102 ? ILE B 112 ? PHE B 241 ILE B 251 B 3 ARG B 72 ? MET B 79 ? ARG B 211 MET B 218 B 4 VAL B 61 ? ILE B 67 ? VAL B 200 ILE B 206 B 5 ARG B 17 ? SER B 23 ? ARG B 156 SER B 162 B 6 GLU B 138 ? ILE B 139 ? GLU B 277 ILE B 278 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 38 ? N TRP A 177 O PHE A 102 ? O PHE A 241 A 2 3 O ARG A 105 ? O ARG A 244 N GLU A 78 ? N GLU A 217 A 3 4 O ALA A 77 ? O ALA A 216 N LEU A 63 ? N LEU A 202 A 4 5 O SER A 66 ? O SER A 205 N ILE A 21 ? N ILE A 160 A 5 6 N PHE A 18 ? N PHE A 157 O ILE A 139 ? O ILE A 278 B 1 2 N TRP B 38 ? N TRP B 177 O PHE B 102 ? O PHE B 241 B 2 3 O ARG B 105 ? O ARG B 244 N GLU B 78 ? N GLU B 217 B 3 4 O MET B 79 ? O MET B 218 N VAL B 61 ? N VAL B 200 B 4 5 O PHE B 64 ? O PHE B 203 N ILE B 21 ? N ILE B 160 B 5 6 N PHE B 18 ? N PHE B 157 O ILE B 139 ? O ILE B 278 # _atom_sites.entry_id 4RCM _atom_sites.fract_transf_matrix[1][1] 0.024137 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005608 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017491 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015386 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 140 140 GLY GLY A . n A 1 2 SER 2 141 141 SER SER A . n A 1 3 ALA 3 142 142 ALA ALA A . n A 1 4 ALA 4 143 143 ALA ALA A . n A 1 5 ILE 5 144 144 ILE ILE A . n A 1 6 ILE 6 145 145 ILE ILE A . n A 1 7 PRO 7 146 146 PRO PRO A . n A 1 8 PRO 8 147 147 PRO PRO A . n A 1 9 TRP 9 148 148 TRP TRP A . n A 1 10 LEU 10 149 149 LEU LEU A . n A 1 11 ASN 11 150 150 ASN ASN A . n A 1 12 ILE 12 151 151 ILE ILE A . n A 1 13 PRO 13 152 152 PRO PRO A . n A 1 14 GLU 14 153 153 GLU GLU A . n A 1 15 ASN 15 154 154 ASN ASN A . n A 1 16 SER 16 155 155 SER SER A . n A 1 17 ARG 17 156 156 ARG ARG A . n A 1 18 PHE 18 157 157 PHE PHE A . n A 1 19 PHE 19 158 158 PHE PHE A . n A 1 20 VAL 20 159 159 VAL VAL A . n A 1 21 ILE 21 160 160 ILE ILE A . n A 1 22 LYS 22 161 161 LYS LYS A . n A 1 23 SER 23 162 162 SER SER A . n A 1 24 SER 24 163 163 SER SER A . n A 1 25 SER 25 164 164 SER SER A . n A 1 26 LEU 26 165 165 LEU LEU A . n A 1 27 LYS 27 166 166 LYS LYS A . n A 1 28 HIS 28 167 167 HIS HIS A . n A 1 29 VAL 29 168 168 VAL VAL A . n A 1 30 LYS 30 169 169 LYS LYS A . n A 1 31 ARG 31 170 170 ARG ARG A . n A 1 32 SER 32 171 171 SER SER A . n A 1 33 PHE 33 172 172 PHE PHE A . n A 1 34 TYR 34 173 173 TYR TYR A . n A 1 35 ASN 35 174 174 ASN ASN A . n A 1 36 GLY 36 175 175 GLY GLY A . n A 1 37 ILE 37 176 176 ILE ILE A . n A 1 38 TRP 38 177 177 TRP TRP A . n A 1 39 SER 39 178 178 SER SER A . n A 1 40 SER 40 179 179 SER SER A . n A 1 41 THR 41 180 180 THR THR A . n A 1 42 HIS 42 181 181 HIS HIS A . n A 1 43 PHE 43 182 182 PHE PHE A . n A 1 44 GLY 44 183 183 GLY GLY A . n A 1 45 ASN 45 184 184 ASN ASN A . n A 1 46 LYS 46 185 185 LYS LYS A . n A 1 47 ARG 47 186 186 ARG ARG A . n A 1 48 LEU 48 187 187 LEU LEU A . n A 1 49 SER 49 188 188 SER SER A . n A 1 50 GLU 50 189 189 GLU GLU A . n A 1 51 ALA 51 190 190 ALA ALA A . n A 1 52 TYR 52 191 191 TYR TYR A . n A 1 53 LYS 53 192 192 LYS LYS A . n A 1 54 LYS 54 193 193 LYS LYS A . n A 1 55 LEU 55 194 194 LEU LEU A . n A 1 56 ASN 56 195 195 ASN ASN A . n A 1 57 SER 57 196 196 SER SER A . n A 1 58 GLY 58 197 197 GLY GLY A . n A 1 59 ALA 59 198 198 ALA ALA A . n A 1 60 LYS 60 199 199 LYS LYS A . n A 1 61 VAL 61 200 200 VAL VAL A . n A 1 62 PHE 62 201 201 PHE PHE A . n A 1 63 LEU 63 202 202 LEU LEU A . n A 1 64 PHE 64 203 203 PHE PHE A . n A 1 65 PHE 65 204 204 PHE PHE A . n A 1 66 SER 66 205 205 SER SER A . n A 1 67 ILE 67 206 206 ILE ILE A . n A 1 68 ASN 68 207 207 ASN ASN A . n A 1 69 THR 69 208 208 THR THR A . n A 1 70 SER 70 209 209 SER SER A . n A 1 71 GLY 71 210 210 GLY GLY A . n A 1 72 ARG 72 211 211 ARG ARG A . n A 1 73 PHE 73 212 212 PHE PHE A . n A 1 74 CYS 74 213 213 CYS CYS A . n A 1 75 GLY 75 214 214 GLY GLY A . n A 1 76 VAL 76 215 215 VAL VAL A . n A 1 77 ALA 77 216 216 ALA ALA A . n A 1 78 GLU 78 217 217 GLU GLU A . n A 1 79 MET 79 218 218 MET MET A . n A 1 80 VAL 80 219 219 VAL VAL A . n A 1 81 SER 81 220 220 SER SER A . n A 1 82 ASP 82 221 221 ASP ASP A . n A 1 83 LEU 83 222 222 LEU LEU A . n A 1 84 LYS 84 223 223 LYS LYS A . n A 1 85 MET 85 224 224 MET MET A . n A 1 86 ASP 86 225 225 ASP ASP A . n A 1 87 LEU 87 226 226 LEU LEU A . n A 1 88 ASP 88 227 227 ASP ASP A . n A 1 89 THR 89 228 228 THR THR A . n A 1 90 SER 90 229 229 SER SER A . n A 1 91 ILE 91 230 230 ILE ILE A . n A 1 92 TRP 92 231 231 TRP TRP A . n A 1 93 GLU 93 232 232 GLU GLU A . n A 1 94 ASP 94 233 233 ASP ASP A . n A 1 95 GLU 95 234 234 GLU GLU A . n A 1 96 GLN 96 235 235 GLN GLN A . n A 1 97 LYS 97 236 236 LYS LYS A . n A 1 98 TYR 98 237 237 TYR TYR A . n A 1 99 GLY 99 238 238 GLY GLY A . n A 1 100 LYS 100 239 239 LYS LYS A . n A 1 101 ALA 101 240 240 ALA ALA A . n A 1 102 PHE 102 241 241 PHE PHE A . n A 1 103 LYS 103 242 242 LYS LYS A . n A 1 104 VAL 104 243 243 VAL VAL A . n A 1 105 ARG 105 244 244 ARG ARG A . n A 1 106 TRP 106 245 245 TRP TRP A . n A 1 107 VAL 107 246 246 VAL VAL A . n A 1 108 ILE 108 247 247 ILE ILE A . n A 1 109 VAL 109 248 248 VAL VAL A . n A 1 110 ARG 110 249 249 ARG ARG A . n A 1 111 ASP 111 250 250 ASP ASP A . n A 1 112 ILE 112 251 251 ILE ILE A . n A 1 113 ASN 113 252 252 ASN ASN A . n A 1 114 ASN 114 253 253 ASN ASN A . n A 1 115 ARG 115 254 254 ARG ARG A . n A 1 116 SER 116 255 255 SER SER A . n A 1 117 LEU 117 256 256 LEU LEU A . n A 1 118 LYS 118 257 257 LYS LYS A . n A 1 119 ARG 119 258 258 ARG ARG A . n A 1 120 PHE 120 259 259 PHE PHE A . n A 1 121 LEU 121 260 260 LEU LEU A . n A 1 122 ILE 122 261 261 ILE ILE A . n A 1 123 PRO 123 262 262 PRO PRO A . n A 1 124 SER 124 263 263 SER SER A . n A 1 125 ASN 125 264 264 ASN ASN A . n A 1 126 GLU 126 265 265 GLU GLU A . n A 1 127 MET 127 266 266 MET MET A . n A 1 128 LYS 128 267 267 LYS LYS A . n A 1 129 PRO 129 268 268 PRO PRO A . n A 1 130 ILE 130 269 269 ILE ILE A . n A 1 131 THR 131 270 270 THR THR A . n A 1 132 HIS 132 271 271 HIS HIS A . n A 1 133 SER 133 272 272 SER SER A . n A 1 134 ARG 134 273 273 ARG ARG A . n A 1 135 ASP 135 274 274 ASP ASP A . n A 1 136 THR 136 275 275 THR THR A . n A 1 137 GLN 137 276 276 GLN GLN A . n A 1 138 GLU 138 277 277 GLU GLU A . n A 1 139 ILE 139 278 278 ILE ILE A . n A 1 140 PRO 140 279 279 PRO PRO A . n A 1 141 TYR 141 280 280 TYR TYR A . n A 1 142 SER 142 281 281 SER SER A . n A 1 143 ILE 143 282 282 ILE ILE A . n A 1 144 GLY 144 283 283 GLY GLY A . n A 1 145 ILE 145 284 284 ILE ILE A . n A 1 146 SER 146 285 285 SER SER A . n A 1 147 ILE 147 286 286 ILE ILE A . n A 1 148 ILE 148 287 287 ILE ILE A . n A 1 149 ASN 149 288 288 ASN ASN A . n A 1 150 LEU 150 289 289 LEU LEU A . n A 1 151 PHE 151 290 290 PHE PHE A . n A 1 152 LYS 152 291 291 LYS LYS A . n A 1 153 THR 153 292 292 THR THR A . n A 1 154 GLN 154 293 293 GLN GLN A . n A 1 155 ASP 155 294 294 ASP ASP A . n A 1 156 SER 156 295 295 SER SER A . n A 1 157 ASP 157 296 296 ASP ASP A . n A 1 158 ILE 158 297 297 ILE ILE A . n A 1 159 PHE 159 298 298 PHE PHE A . n A 1 160 SER 160 299 299 SER SER A . n A 1 161 PHE 161 300 300 PHE PHE A . n A 1 162 LEU 162 301 301 LEU LEU A . n A 1 163 ASP 163 302 302 ASP ASP A . n A 1 164 GLU 164 303 303 GLU GLU A . n A 1 165 THR 165 304 ? ? ? A . n A 1 166 TYR 166 305 ? ? ? A . n A 1 167 GLU 167 306 ? ? ? A . n B 1 1 GLY 1 140 ? ? ? B . n B 1 2 SER 2 141 ? ? ? B . n B 1 3 ALA 3 142 142 ALA ALA B . n B 1 4 ALA 4 143 143 ALA ALA B . n B 1 5 ILE 5 144 144 ILE ILE B . n B 1 6 ILE 6 145 145 ILE ILE B . n B 1 7 PRO 7 146 146 PRO PRO B . n B 1 8 PRO 8 147 147 PRO PRO B . n B 1 9 TRP 9 148 148 TRP TRP B . n B 1 10 LEU 10 149 149 LEU LEU B . n B 1 11 ASN 11 150 150 ASN ASN B . n B 1 12 ILE 12 151 151 ILE ILE B . n B 1 13 PRO 13 152 152 PRO PRO B . n B 1 14 GLU 14 153 153 GLU GLU B . n B 1 15 ASN 15 154 154 ASN ASN B . n B 1 16 SER 16 155 155 SER SER B . n B 1 17 ARG 17 156 156 ARG ARG B . n B 1 18 PHE 18 157 157 PHE PHE B . n B 1 19 PHE 19 158 158 PHE PHE B . n B 1 20 VAL 20 159 159 VAL VAL B . n B 1 21 ILE 21 160 160 ILE ILE B . n B 1 22 LYS 22 161 161 LYS LYS B . n B 1 23 SER 23 162 162 SER SER B . n B 1 24 SER 24 163 163 SER SER B . n B 1 25 SER 25 164 164 SER SER B . n B 1 26 LEU 26 165 165 LEU LEU B . n B 1 27 LYS 27 166 166 LYS LYS B . n B 1 28 HIS 28 167 167 HIS HIS B . n B 1 29 VAL 29 168 168 VAL VAL B . n B 1 30 LYS 30 169 169 LYS LYS B . n B 1 31 ARG 31 170 170 ARG ARG B . n B 1 32 SER 32 171 171 SER SER B . n B 1 33 PHE 33 172 172 PHE PHE B . n B 1 34 TYR 34 173 173 TYR TYR B . n B 1 35 ASN 35 174 174 ASN ASN B . n B 1 36 GLY 36 175 175 GLY GLY B . n B 1 37 ILE 37 176 176 ILE ILE B . n B 1 38 TRP 38 177 177 TRP TRP B . n B 1 39 SER 39 178 178 SER SER B . n B 1 40 SER 40 179 179 SER SER B . n B 1 41 THR 41 180 180 THR THR B . n B 1 42 HIS 42 181 181 HIS HIS B . n B 1 43 PHE 43 182 182 PHE PHE B . n B 1 44 GLY 44 183 183 GLY GLY B . n B 1 45 ASN 45 184 184 ASN ASN B . n B 1 46 LYS 46 185 185 LYS LYS B . n B 1 47 ARG 47 186 186 ARG ARG B . n B 1 48 LEU 48 187 187 LEU LEU B . n B 1 49 SER 49 188 188 SER SER B . n B 1 50 GLU 50 189 189 GLU GLU B . n B 1 51 ALA 51 190 190 ALA ALA B . n B 1 52 TYR 52 191 191 TYR TYR B . n B 1 53 LYS 53 192 192 LYS LYS B . n B 1 54 LYS 54 193 193 LYS LYS B . n B 1 55 LEU 55 194 194 LEU LEU B . n B 1 56 ASN 56 195 195 ASN ASN B . n B 1 57 SER 57 196 196 SER SER B . n B 1 58 GLY 58 197 197 GLY GLY B . n B 1 59 ALA 59 198 198 ALA ALA B . n B 1 60 LYS 60 199 199 LYS LYS B . n B 1 61 VAL 61 200 200 VAL VAL B . n B 1 62 PHE 62 201 201 PHE PHE B . n B 1 63 LEU 63 202 202 LEU LEU B . n B 1 64 PHE 64 203 203 PHE PHE B . n B 1 65 PHE 65 204 204 PHE PHE B . n B 1 66 SER 66 205 205 SER SER B . n B 1 67 ILE 67 206 206 ILE ILE B . n B 1 68 ASN 68 207 207 ASN ASN B . n B 1 69 THR 69 208 208 THR THR B . n B 1 70 SER 70 209 209 SER SER B . n B 1 71 GLY 71 210 210 GLY GLY B . n B 1 72 ARG 72 211 211 ARG ARG B . n B 1 73 PHE 73 212 212 PHE PHE B . n B 1 74 CYS 74 213 213 CYS CYS B . n B 1 75 GLY 75 214 214 GLY GLY B . n B 1 76 VAL 76 215 215 VAL VAL B . n B 1 77 ALA 77 216 216 ALA ALA B . n B 1 78 GLU 78 217 217 GLU GLU B . n B 1 79 MET 79 218 218 MET MET B . n B 1 80 VAL 80 219 219 VAL VAL B . n B 1 81 SER 81 220 220 SER SER B . n B 1 82 ASP 82 221 221 ASP ASP B . n B 1 83 LEU 83 222 222 LEU LEU B . n B 1 84 LYS 84 223 223 LYS LYS B . n B 1 85 MET 85 224 224 MET MET B . n B 1 86 ASP 86 225 225 ASP ASP B . n B 1 87 LEU 87 226 226 LEU LEU B . n B 1 88 ASP 88 227 227 ASP ASP B . n B 1 89 THR 89 228 228 THR THR B . n B 1 90 SER 90 229 229 SER SER B . n B 1 91 ILE 91 230 230 ILE ILE B . n B 1 92 TRP 92 231 231 TRP TRP B . n B 1 93 GLU 93 232 232 GLU GLU B . n B 1 94 ASP 94 233 233 ASP ASP B . n B 1 95 GLU 95 234 234 GLU GLU B . n B 1 96 GLN 96 235 235 GLN GLN B . n B 1 97 LYS 97 236 236 LYS LYS B . n B 1 98 TYR 98 237 237 TYR TYR B . n B 1 99 GLY 99 238 238 GLY GLY B . n B 1 100 LYS 100 239 239 LYS LYS B . n B 1 101 ALA 101 240 240 ALA ALA B . n B 1 102 PHE 102 241 241 PHE PHE B . n B 1 103 LYS 103 242 242 LYS LYS B . n B 1 104 VAL 104 243 243 VAL VAL B . n B 1 105 ARG 105 244 244 ARG ARG B . n B 1 106 TRP 106 245 245 TRP TRP B . n B 1 107 VAL 107 246 246 VAL VAL B . n B 1 108 ILE 108 247 247 ILE ILE B . n B 1 109 VAL 109 248 248 VAL VAL B . n B 1 110 ARG 110 249 249 ARG ARG B . n B 1 111 ASP 111 250 250 ASP ASP B . n B 1 112 ILE 112 251 251 ILE ILE B . n B 1 113 ASN 113 252 252 ASN ASN B . n B 1 114 ASN 114 253 253 ASN ASN B . n B 1 115 ARG 115 254 254 ARG ARG B . n B 1 116 SER 116 255 255 SER SER B . n B 1 117 LEU 117 256 256 LEU LEU B . n B 1 118 LYS 118 257 257 LYS LYS B . n B 1 119 ARG 119 258 258 ARG ARG B . n B 1 120 PHE 120 259 259 PHE PHE B . n B 1 121 LEU 121 260 260 LEU LEU B . n B 1 122 ILE 122 261 261 ILE ILE B . n B 1 123 PRO 123 262 262 PRO PRO B . n B 1 124 SER 124 263 263 SER SER B . n B 1 125 ASN 125 264 264 ASN ASN B . n B 1 126 GLU 126 265 265 GLU GLU B . n B 1 127 MET 127 266 266 MET MET B . n B 1 128 LYS 128 267 267 LYS LYS B . n B 1 129 PRO 129 268 268 PRO PRO B . n B 1 130 ILE 130 269 269 ILE ILE B . n B 1 131 THR 131 270 270 THR THR B . n B 1 132 HIS 132 271 271 HIS HIS B . n B 1 133 SER 133 272 272 SER SER B . n B 1 134 ARG 134 273 273 ARG ARG B . n B 1 135 ASP 135 274 274 ASP ASP B . n B 1 136 THR 136 275 275 THR THR B . n B 1 137 GLN 137 276 276 GLN GLN B . n B 1 138 GLU 138 277 277 GLU GLU B . n B 1 139 ILE 139 278 278 ILE ILE B . n B 1 140 PRO 140 279 279 PRO PRO B . n B 1 141 TYR 141 280 280 TYR TYR B . n B 1 142 SER 142 281 281 SER SER B . n B 1 143 ILE 143 282 282 ILE ILE B . n B 1 144 GLY 144 283 283 GLY GLY B . n B 1 145 ILE 145 284 284 ILE ILE B . n B 1 146 SER 146 285 285 SER SER B . n B 1 147 ILE 147 286 286 ILE ILE B . n B 1 148 ILE 148 287 287 ILE ILE B . n B 1 149 ASN 149 288 288 ASN ASN B . n B 1 150 LEU 150 289 289 LEU LEU B . n B 1 151 PHE 151 290 290 PHE PHE B . n B 1 152 LYS 152 291 291 LYS LYS B . n B 1 153 THR 153 292 292 THR THR B . n B 1 154 GLN 154 293 293 GLN GLN B . n B 1 155 ASP 155 294 294 ASP ASP B . n B 1 156 SER 156 295 295 SER SER B . n B 1 157 ASP 157 296 ? ? ? B . n B 1 158 ILE 158 297 297 ILE ILE B . n B 1 159 PHE 159 298 298 PHE PHE B . n B 1 160 SER 160 299 299 SER SER B . n B 1 161 PHE 161 300 300 PHE PHE B . n B 1 162 LEU 162 301 301 LEU LEU B . n B 1 163 ASP 163 302 302 ASP ASP B . n B 1 164 GLU 164 303 ? ? ? B . n B 1 165 THR 165 304 ? ? ? B . n B 1 166 TYR 166 305 ? ? ? B . n B 1 167 GLU 167 306 ? ? ? B . n C 2 1 U 1 1 ? ? ? D . n C 2 2 G 2 2 ? ? ? D . n C 2 3 6MZ 3 3 3 6MZ 6MZ D . n C 2 4 C 4 4 ? ? ? D . n C 2 5 U 5 5 ? ? ? D . n D 2 1 U 1 1 ? ? ? E . n D 2 2 G 2 2 ? ? ? E . n D 2 3 6MZ 3 3 3 6MZ 6MZ E . n D 2 4 C 4 4 ? ? ? E . n D 2 5 U 5 5 ? ? ? E . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 UNX 1 401 402 UNX UNX A . F 3 UNX 1 402 403 UNX UNX A . G 3 UNX 1 403 404 UNX UNX A . H 3 UNX 1 404 405 UNX UNX A . I 3 UNX 1 405 406 UNX UNX A . J 3 UNX 1 406 407 UNX UNX A . K 3 UNX 1 407 408 UNX UNX A . L 3 UNX 1 408 409 UNX UNX A . M 3 UNX 1 409 410 UNX UNX A . N 3 UNX 1 401 402 UNX UNX B . O 3 UNX 1 402 403 UNX UNX B . P 3 UNX 1 403 404 UNX UNX B . Q 3 UNX 1 404 405 UNX UNX B . R 3 UNX 1 405 406 UNX UNX B . S 3 UNX 1 406 407 UNX UNX B . T 3 UNX 1 407 408 UNX UNX B . U 3 UNX 1 408 409 UNX UNX B . V 3 UNX 1 409 410 UNX UNX B . W 3 UNX 1 410 411 UNX UNX B . X 4 HOH 1 501 501 HOH HOH A . X 4 HOH 2 502 502 HOH HOH A . X 4 HOH 3 503 503 HOH HOH A . X 4 HOH 4 504 504 HOH HOH A . X 4 HOH 5 505 505 HOH HOH A . X 4 HOH 6 506 506 HOH HOH A . X 4 HOH 7 507 507 HOH HOH A . X 4 HOH 8 508 508 HOH HOH A . X 4 HOH 9 509 509 HOH HOH A . X 4 HOH 10 510 510 HOH HOH A . X 4 HOH 11 511 511 HOH HOH A . X 4 HOH 12 512 512 HOH HOH A . X 4 HOH 13 513 513 HOH HOH A . X 4 HOH 14 514 514 HOH HOH A . X 4 HOH 15 515 515 HOH HOH A . X 4 HOH 16 516 516 HOH HOH A . X 4 HOH 17 517 517 HOH HOH A . X 4 HOH 18 518 518 HOH HOH A . X 4 HOH 19 519 519 HOH HOH A . X 4 HOH 20 520 520 HOH HOH A . X 4 HOH 21 521 521 HOH HOH A . X 4 HOH 22 522 522 HOH HOH A . X 4 HOH 23 523 523 HOH HOH A . X 4 HOH 24 524 524 HOH HOH A . X 4 HOH 25 525 525 HOH HOH A . X 4 HOH 26 526 526 HOH HOH A . X 4 HOH 27 527 527 HOH HOH A . X 4 HOH 28 528 528 HOH HOH A . X 4 HOH 29 529 529 HOH HOH A . X 4 HOH 30 530 530 HOH HOH A . X 4 HOH 31 531 531 HOH HOH A . X 4 HOH 32 532 532 HOH HOH A . X 4 HOH 33 533 533 HOH HOH A . X 4 HOH 34 534 534 HOH HOH A . X 4 HOH 35 535 535 HOH HOH A . X 4 HOH 36 536 536 HOH HOH A . X 4 HOH 37 537 537 HOH HOH A . X 4 HOH 38 538 538 HOH HOH A . X 4 HOH 39 539 539 HOH HOH A . X 4 HOH 40 540 540 HOH HOH A . X 4 HOH 41 541 541 HOH HOH A . X 4 HOH 42 542 542 HOH HOH A . X 4 HOH 43 543 543 HOH HOH A . X 4 HOH 44 544 544 HOH HOH A . X 4 HOH 45 545 545 HOH HOH A . X 4 HOH 46 546 546 HOH HOH A . X 4 HOH 47 547 547 HOH HOH A . X 4 HOH 48 548 548 HOH HOH A . X 4 HOH 49 549 549 HOH HOH A . X 4 HOH 50 550 550 HOH HOH A . X 4 HOH 51 551 551 HOH HOH A . X 4 HOH 52 552 552 HOH HOH A . Y 4 HOH 1 501 501 HOH HOH B . Y 4 HOH 2 502 502 HOH HOH B . Y 4 HOH 3 503 503 HOH HOH B . Y 4 HOH 4 504 504 HOH HOH B . Y 4 HOH 5 505 505 HOH HOH B . Y 4 HOH 6 506 506 HOH HOH B . Y 4 HOH 7 507 507 HOH HOH B . Y 4 HOH 8 508 508 HOH HOH B . Y 4 HOH 9 509 509 HOH HOH B . Y 4 HOH 10 510 510 HOH HOH B . Y 4 HOH 11 511 511 HOH HOH B . Y 4 HOH 12 512 512 HOH HOH B . Y 4 HOH 13 513 513 HOH HOH B . Y 4 HOH 14 514 514 HOH HOH B . Y 4 HOH 15 515 515 HOH HOH B . Y 4 HOH 16 516 516 HOH HOH B . Y 4 HOH 17 517 517 HOH HOH B . Y 4 HOH 18 518 518 HOH HOH B . Y 4 HOH 19 519 519 HOH HOH B . Y 4 HOH 20 520 520 HOH HOH B . Y 4 HOH 21 521 521 HOH HOH B . Y 4 HOH 22 522 522 HOH HOH B . Y 4 HOH 23 523 523 HOH HOH B . Y 4 HOH 24 524 524 HOH HOH B . Y 4 HOH 25 525 525 HOH HOH B . Y 4 HOH 26 526 526 HOH HOH B . Y 4 HOH 27 527 527 HOH HOH B . Y 4 HOH 28 528 528 HOH HOH B . Y 4 HOH 29 529 529 HOH HOH B . Y 4 HOH 30 530 530 HOH HOH B . Y 4 HOH 31 531 531 HOH HOH B . Y 4 HOH 32 532 532 HOH HOH B . Y 4 HOH 33 533 533 HOH HOH B . Y 4 HOH 34 534 534 HOH HOH B . Y 4 HOH 35 535 535 HOH HOH B . Y 4 HOH 36 536 536 HOH HOH B . Y 4 HOH 37 537 537 HOH HOH B . Y 4 HOH 38 538 538 HOH HOH B . Y 4 HOH 39 539 539 HOH HOH B . Y 4 HOH 40 540 540 HOH HOH B . Y 4 HOH 41 541 541 HOH HOH B . Y 4 HOH 42 542 542 HOH HOH B . Y 4 HOH 43 543 543 HOH HOH B . Y 4 HOH 44 544 544 HOH HOH B . Y 4 HOH 45 545 545 HOH HOH B . Y 4 HOH 46 546 546 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 C 6MZ 3 D 6MZ 3 ? A "N6-METHYLADENOSINE-5'-MONOPHOSPHATE" 2 D 6MZ 3 E 6MZ 3 ? A "N6-METHYLADENOSINE-5'-MONOPHOSPHATE" # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,H,I,J,K,L,M,X 2 1 B,D,N,O,P,Q,R,S,T,U,V,W,Y # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-19 2 'Structure model' 1 1 2015-09-09 3 'Structure model' 1 2 2015-10-21 4 'Structure model' 2 0 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Polymer sequence' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' entity_poly 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 Aimless 0.2.17 07/01/14 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 196 ? ? 65.79 -125.72 2 1 THR A 208 ? ? 71.49 -53.16 3 1 ASN A 264 ? ? -118.60 66.37 4 1 GLU A 265 ? ? 37.78 41.26 5 1 ASP A 302 ? ? -86.27 35.46 6 1 SER B 179 ? ? -104.65 -168.58 7 1 SER B 196 ? ? 53.89 -133.11 8 1 THR B 208 ? ? 72.36 -48.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 166 ? CG ? A LYS 27 CG 2 1 Y 1 A LYS 166 ? CD ? A LYS 27 CD 3 1 Y 1 A LYS 166 ? CE ? A LYS 27 CE 4 1 Y 1 A LYS 166 ? NZ ? A LYS 27 NZ 5 1 Y 1 A LYS 185 ? CG ? A LYS 46 CG 6 1 Y 1 A LYS 185 ? CD ? A LYS 46 CD 7 1 Y 1 A LYS 185 ? CE ? A LYS 46 CE 8 1 Y 1 A LYS 185 ? NZ ? A LYS 46 NZ 9 1 Y 1 A GLU 189 ? CD ? A GLU 50 CD 10 1 Y 1 A GLU 189 ? OE1 ? A GLU 50 OE1 11 1 Y 1 A GLU 189 ? OE2 ? A GLU 50 OE2 12 1 Y 1 A LYS 192 ? CE ? A LYS 53 CE 13 1 Y 1 A LYS 192 ? NZ ? A LYS 53 NZ 14 1 Y 1 A LYS 193 ? CE ? A LYS 54 CE 15 1 Y 1 A LYS 193 ? NZ ? A LYS 54 NZ 16 1 Y 1 A MET 224 ? CG ? A MET 85 CG 17 1 Y 1 A MET 224 ? SD ? A MET 85 SD 18 1 Y 1 A MET 224 ? CE ? A MET 85 CE 19 1 Y 1 A ASP 233 ? CG ? A ASP 94 CG 20 1 Y 1 A ASP 233 ? OD1 ? A ASP 94 OD1 21 1 Y 1 A ASP 233 ? OD2 ? A ASP 94 OD2 22 1 Y 1 A GLN 235 ? CG ? A GLN 96 CG 23 1 Y 1 A GLN 235 ? CD ? A GLN 96 CD 24 1 Y 1 A GLN 235 ? OE1 ? A GLN 96 OE1 25 1 Y 1 A GLN 235 ? NE2 ? A GLN 96 NE2 26 1 Y 1 A LYS 236 ? CE ? A LYS 97 CE 27 1 Y 1 A LYS 236 ? NZ ? A LYS 97 NZ 28 1 Y 1 A LYS 239 ? CE ? A LYS 100 CE 29 1 Y 1 A LYS 239 ? NZ ? A LYS 100 NZ 30 1 Y 1 A ARG 254 ? CG ? A ARG 115 CG 31 1 Y 1 A ARG 254 ? CD ? A ARG 115 CD 32 1 Y 1 A ARG 254 ? NE ? A ARG 115 NE 33 1 Y 1 A ARG 254 ? CZ ? A ARG 115 CZ 34 1 Y 1 A ARG 254 ? NH1 ? A ARG 115 NH1 35 1 Y 1 A ARG 254 ? NH2 ? A ARG 115 NH2 36 1 Y 1 A ARG 258 ? CG ? A ARG 119 CG 37 1 Y 1 A ARG 258 ? CD ? A ARG 119 CD 38 1 Y 1 A ARG 258 ? NE ? A ARG 119 NE 39 1 Y 1 A ARG 258 ? CZ ? A ARG 119 CZ 40 1 Y 1 A ARG 258 ? NH1 ? A ARG 119 NH1 41 1 Y 1 A ARG 258 ? NH2 ? A ARG 119 NH2 42 1 Y 1 A GLU 265 ? CG ? A GLU 126 CG 43 1 Y 1 A GLU 265 ? CD ? A GLU 126 CD 44 1 Y 1 A GLU 265 ? OE1 ? A GLU 126 OE1 45 1 Y 1 A GLU 265 ? OE2 ? A GLU 126 OE2 46 1 Y 1 A GLN 293 ? CD ? A GLN 154 CD 47 1 Y 1 A GLN 293 ? OE1 ? A GLN 154 OE1 48 1 Y 1 A GLN 293 ? NE2 ? A GLN 154 NE2 49 1 Y 1 A GLU 303 ? C ? A GLU 164 C 50 1 Y 1 A GLU 303 ? O ? A GLU 164 O 51 1 Y 1 A GLU 303 ? CB ? A GLU 164 CB 52 1 Y 1 A GLU 303 ? CG ? A GLU 164 CG 53 1 Y 1 A GLU 303 ? CD ? A GLU 164 CD 54 1 Y 1 A GLU 303 ? OE1 ? A GLU 164 OE1 55 1 Y 1 A GLU 303 ? OE2 ? A GLU 164 OE2 56 1 Y 1 B LYS 166 ? CG ? B LYS 27 CG 57 1 Y 1 B LYS 166 ? CD ? B LYS 27 CD 58 1 Y 1 B LYS 166 ? CE ? B LYS 27 CE 59 1 Y 1 B LYS 166 ? NZ ? B LYS 27 NZ 60 1 Y 1 B LYS 185 ? CE ? B LYS 46 CE 61 1 Y 1 B LYS 185 ? NZ ? B LYS 46 NZ 62 1 Y 1 B LYS 193 ? CD ? B LYS 54 CD 63 1 Y 1 B LYS 193 ? CE ? B LYS 54 CE 64 1 Y 1 B LYS 193 ? NZ ? B LYS 54 NZ 65 1 Y 1 B LYS 223 ? CE ? B LYS 84 CE 66 1 Y 1 B LYS 223 ? NZ ? B LYS 84 NZ 67 1 Y 1 B MET 224 ? CG ? B MET 85 CG 68 1 Y 1 B MET 224 ? SD ? B MET 85 SD 69 1 Y 1 B MET 224 ? CE ? B MET 85 CE 70 1 Y 1 B GLN 235 ? CG ? B GLN 96 CG 71 1 Y 1 B GLN 235 ? CD ? B GLN 96 CD 72 1 Y 1 B GLN 235 ? OE1 ? B GLN 96 OE1 73 1 Y 1 B GLN 235 ? NE2 ? B GLN 96 NE2 74 1 Y 1 B LYS 236 ? CE ? B LYS 97 CE 75 1 Y 1 B LYS 236 ? NZ ? B LYS 97 NZ 76 1 Y 1 B ARG 254 ? CD ? B ARG 115 CD 77 1 Y 1 B ARG 254 ? NE ? B ARG 115 NE 78 1 Y 1 B ARG 254 ? CZ ? B ARG 115 CZ 79 1 Y 1 B ARG 254 ? NH1 ? B ARG 115 NH1 80 1 Y 1 B ARG 254 ? NH2 ? B ARG 115 NH2 81 1 Y 1 B LYS 257 ? NZ ? B LYS 118 NZ 82 1 Y 1 B ARG 273 ? CG ? B ARG 134 CG 83 1 Y 1 B ARG 273 ? CD ? B ARG 134 CD 84 1 Y 1 B ARG 273 ? NE ? B ARG 134 NE 85 1 Y 1 B ARG 273 ? CZ ? B ARG 134 CZ 86 1 Y 1 B ARG 273 ? NH1 ? B ARG 134 NH1 87 1 Y 1 B ARG 273 ? NH2 ? B ARG 134 NH2 88 1 Y 1 B GLN 293 ? CG ? B GLN 154 CG 89 1 Y 1 B GLN 293 ? CD ? B GLN 154 CD 90 1 Y 1 B GLN 293 ? OE1 ? B GLN 154 OE1 91 1 Y 1 B GLN 293 ? NE2 ? B GLN 154 NE2 92 1 Y 1 B SER 295 ? CA ? B SER 156 CA 93 1 Y 1 B SER 295 ? C ? B SER 156 C 94 1 Y 1 B SER 295 ? O ? B SER 156 O 95 1 Y 1 B SER 295 ? CB ? B SER 156 CB 96 1 Y 1 B SER 295 ? OG ? B SER 156 OG 97 1 Y 1 B ILE 297 ? CG1 ? B ILE 158 CG1 98 1 Y 1 B ILE 297 ? CG2 ? B ILE 158 CG2 99 1 Y 1 B ILE 297 ? CD1 ? B ILE 158 CD1 100 1 Y 1 D 6MZ 3 ? O1P ? C 6MZ 3 O1P 101 1 Y 1 D 6MZ 3 ? O2P ? C 6MZ 3 O2P 102 1 Y 1 D 6MZ 3 ? P ? C 6MZ 3 P 103 1 Y 1 E 6MZ 3 ? O1P ? D 6MZ 3 O1P 104 1 Y 1 E 6MZ 3 ? O2P ? D 6MZ 3 O2P 105 1 Y 1 E 6MZ 3 ? P ? D 6MZ 3 P # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 304 ? A THR 165 2 1 Y 1 A TYR 305 ? A TYR 166 3 1 Y 1 A GLU 306 ? A GLU 167 4 1 Y 1 B GLY 140 ? B GLY 1 5 1 Y 1 B SER 141 ? B SER 2 6 1 Y 1 B ASP 296 ? B ASP 157 7 1 Y 1 B GLU 303 ? B GLU 164 8 1 Y 1 B THR 304 ? B THR 165 9 1 Y 1 B TYR 305 ? B TYR 166 10 1 Y 1 B GLU 306 ? B GLU 167 11 1 Y 1 D U 1 ? C U 1 12 1 Y 1 D G 2 ? C G 2 13 1 Y 1 D C 4 ? C C 4 14 1 Y 1 D U 5 ? C U 5 15 1 Y 1 E U 1 ? D U 1 16 1 Y 1 E G 2 ? D G 2 17 1 Y 1 E C 4 ? D C 4 18 1 Y 1 E U 5 ? D U 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6MZ C2 C Y N 1 6MZ C4 C Y N 2 6MZ C5 C Y N 3 6MZ O1P O N N 4 6MZ O2P O N N 5 6MZ N9 N Y N 6 6MZ N3 N Y N 7 6MZ N1 N Y N 8 6MZ C6 C Y N 9 6MZ N6 N N N 10 6MZ C9 C N N 11 6MZ N7 N Y N 12 6MZ C8 C Y N 13 6MZ "O5'" O N N 14 6MZ "C5'" C N N 15 6MZ "C4'" C N R 16 6MZ "O4'" O N N 17 6MZ "C1'" C N R 18 6MZ "C2'" C N R 19 6MZ "O2'" O N N 20 6MZ "C3'" C N S 21 6MZ "O3'" O N N 22 6MZ P P N N 23 6MZ O3P O N N 24 6MZ H2 H N N 25 6MZ H1P H N N 26 6MZ H8 H N N 27 6MZ "H1'" H N N 28 6MZ H9C1 H N N 29 6MZ H9C2 H N N 30 6MZ "H5'1" H N N 31 6MZ "H5'2" H N N 32 6MZ "H4'" H N N 33 6MZ "H3'" H N N 34 6MZ "H2'" H N N 35 6MZ HA H N N 36 6MZ HB H N N 37 6MZ H3P H N N 38 6MZ H6 H N N 39 6MZ H9 H N N 40 ALA N N N N 41 ALA CA C N S 42 ALA C C N N 43 ALA O O N N 44 ALA CB C N N 45 ALA OXT O N N 46 ALA H H N N 47 ALA H2 H N N 48 ALA HA H N N 49 ALA HB1 H N N 50 ALA HB2 H N N 51 ALA HB3 H N N 52 ALA HXT H N N 53 ARG N N N N 54 ARG CA C N S 55 ARG C C N N 56 ARG O O N N 57 ARG CB C N N 58 ARG CG C N N 59 ARG CD C N N 60 ARG NE N N N 61 ARG CZ C N N 62 ARG NH1 N N N 63 ARG NH2 N N N 64 ARG OXT O N N 65 ARG H H N N 66 ARG H2 H N N 67 ARG HA H N N 68 ARG HB2 H N N 69 ARG HB3 H N N 70 ARG HG2 H N N 71 ARG HG3 H N N 72 ARG HD2 H N N 73 ARG HD3 H N N 74 ARG HE H N N 75 ARG HH11 H N N 76 ARG HH12 H N N 77 ARG HH21 H N N 78 ARG HH22 H N N 79 ARG HXT H N N 80 ASN N N N N 81 ASN CA C N S 82 ASN C C N N 83 ASN O O N N 84 ASN CB C N N 85 ASN CG C N N 86 ASN OD1 O N N 87 ASN ND2 N N N 88 ASN OXT O N N 89 ASN H H N N 90 ASN H2 H N N 91 ASN HA H N N 92 ASN HB2 H N N 93 ASN HB3 H N N 94 ASN HD21 H N N 95 ASN HD22 H N N 96 ASN HXT H N N 97 ASP N N N N 98 ASP CA C N S 99 ASP C C N N 100 ASP O O N N 101 ASP CB C N N 102 ASP CG C N N 103 ASP OD1 O N N 104 ASP OD2 O N N 105 ASP OXT O N N 106 ASP H H N N 107 ASP H2 H N N 108 ASP HA H N N 109 ASP HB2 H N N 110 ASP HB3 H N N 111 ASP HD2 H N N 112 ASP HXT H N N 113 C OP3 O N N 114 C P P N N 115 C OP1 O N N 116 C OP2 O N N 117 C "O5'" O N N 118 C "C5'" C N N 119 C "C4'" C N R 120 C "O4'" O N N 121 C "C3'" C N S 122 C "O3'" O N N 123 C "C2'" C N R 124 C "O2'" O N N 125 C "C1'" C N R 126 C N1 N N N 127 C C2 C N N 128 C O2 O N N 129 C N3 N N N 130 C C4 C N N 131 C N4 N N N 132 C C5 C N N 133 C C6 C N N 134 C HOP3 H N N 135 C HOP2 H N N 136 C "H5'" H N N 137 C "H5''" H N N 138 C "H4'" H N N 139 C "H3'" H N N 140 C "HO3'" H N N 141 C "H2'" H N N 142 C "HO2'" H N N 143 C "H1'" H N N 144 C H41 H N N 145 C H42 H N N 146 C H5 H N N 147 C H6 H N N 148 CYS N N N N 149 CYS CA C N R 150 CYS C C N N 151 CYS O O N N 152 CYS CB C N N 153 CYS SG S N N 154 CYS OXT O N N 155 CYS H H N N 156 CYS H2 H N N 157 CYS HA H N N 158 CYS HB2 H N N 159 CYS HB3 H N N 160 CYS HG H N N 161 CYS HXT H N N 162 G OP3 O N N 163 G P P N N 164 G OP1 O N N 165 G OP2 O N N 166 G "O5'" O N N 167 G "C5'" C N N 168 G "C4'" C N R 169 G "O4'" O N N 170 G "C3'" C N S 171 G "O3'" O N N 172 G "C2'" C N R 173 G "O2'" O N N 174 G "C1'" C N R 175 G N9 N Y N 176 G C8 C Y N 177 G N7 N Y N 178 G C5 C Y N 179 G C6 C N N 180 G O6 O N N 181 G N1 N N N 182 G C2 C N N 183 G N2 N N N 184 G N3 N N N 185 G C4 C Y N 186 G HOP3 H N N 187 G HOP2 H N N 188 G "H5'" H N N 189 G "H5''" H N N 190 G "H4'" H N N 191 G "H3'" H N N 192 G "HO3'" H N N 193 G "H2'" H N N 194 G "HO2'" H N N 195 G "H1'" H N N 196 G H8 H N N 197 G H1 H N N 198 G H21 H N N 199 G H22 H N N 200 GLN N N N N 201 GLN CA C N S 202 GLN C C N N 203 GLN O O N N 204 GLN CB C N N 205 GLN CG C N N 206 GLN CD C N N 207 GLN OE1 O N N 208 GLN NE2 N N N 209 GLN OXT O N N 210 GLN H H N N 211 GLN H2 H N N 212 GLN HA H N N 213 GLN HB2 H N N 214 GLN HB3 H N N 215 GLN HG2 H N N 216 GLN HG3 H N N 217 GLN HE21 H N N 218 GLN HE22 H N N 219 GLN HXT H N N 220 GLU N N N N 221 GLU CA C N S 222 GLU C C N N 223 GLU O O N N 224 GLU CB C N N 225 GLU CG C N N 226 GLU CD C N N 227 GLU OE1 O N N 228 GLU OE2 O N N 229 GLU OXT O N N 230 GLU H H N N 231 GLU H2 H N N 232 GLU HA H N N 233 GLU HB2 H N N 234 GLU HB3 H N N 235 GLU HG2 H N N 236 GLU HG3 H N N 237 GLU HE2 H N N 238 GLU HXT H N N 239 GLY N N N N 240 GLY CA C N N 241 GLY C C N N 242 GLY O O N N 243 GLY OXT O N N 244 GLY H H N N 245 GLY H2 H N N 246 GLY HA2 H N N 247 GLY HA3 H N N 248 GLY HXT H N N 249 HIS N N N N 250 HIS CA C N S 251 HIS C C N N 252 HIS O O N N 253 HIS CB C N N 254 HIS CG C Y N 255 HIS ND1 N Y N 256 HIS CD2 C Y N 257 HIS CE1 C Y N 258 HIS NE2 N Y N 259 HIS OXT O N N 260 HIS H H N N 261 HIS H2 H N N 262 HIS HA H N N 263 HIS HB2 H N N 264 HIS HB3 H N N 265 HIS HD1 H N N 266 HIS HD2 H N N 267 HIS HE1 H N N 268 HIS HE2 H N N 269 HIS HXT H N N 270 HOH O O N N 271 HOH H1 H N N 272 HOH H2 H N N 273 ILE N N N N 274 ILE CA C N S 275 ILE C C N N 276 ILE O O N N 277 ILE CB C N S 278 ILE CG1 C N N 279 ILE CG2 C N N 280 ILE CD1 C N N 281 ILE OXT O N N 282 ILE H H N N 283 ILE H2 H N N 284 ILE HA H N N 285 ILE HB H N N 286 ILE HG12 H N N 287 ILE HG13 H N N 288 ILE HG21 H N N 289 ILE HG22 H N N 290 ILE HG23 H N N 291 ILE HD11 H N N 292 ILE HD12 H N N 293 ILE HD13 H N N 294 ILE HXT H N N 295 LEU N N N N 296 LEU CA C N S 297 LEU C C N N 298 LEU O O N N 299 LEU CB C N N 300 LEU CG C N N 301 LEU CD1 C N N 302 LEU CD2 C N N 303 LEU OXT O N N 304 LEU H H N N 305 LEU H2 H N N 306 LEU HA H N N 307 LEU HB2 H N N 308 LEU HB3 H N N 309 LEU HG H N N 310 LEU HD11 H N N 311 LEU HD12 H N N 312 LEU HD13 H N N 313 LEU HD21 H N N 314 LEU HD22 H N N 315 LEU HD23 H N N 316 LEU HXT H N N 317 LYS N N N N 318 LYS CA C N S 319 LYS C C N N 320 LYS O O N N 321 LYS CB C N N 322 LYS CG C N N 323 LYS CD C N N 324 LYS CE C N N 325 LYS NZ N N N 326 LYS OXT O N N 327 LYS H H N N 328 LYS H2 H N N 329 LYS HA H N N 330 LYS HB2 H N N 331 LYS HB3 H N N 332 LYS HG2 H N N 333 LYS HG3 H N N 334 LYS HD2 H N N 335 LYS HD3 H N N 336 LYS HE2 H N N 337 LYS HE3 H N N 338 LYS HZ1 H N N 339 LYS HZ2 H N N 340 LYS HZ3 H N N 341 LYS HXT H N N 342 MET N N N N 343 MET CA C N S 344 MET C C N N 345 MET O O N N 346 MET CB C N N 347 MET CG C N N 348 MET SD S N N 349 MET CE C N N 350 MET OXT O N N 351 MET H H N N 352 MET H2 H N N 353 MET HA H N N 354 MET HB2 H N N 355 MET HB3 H N N 356 MET HG2 H N N 357 MET HG3 H N N 358 MET HE1 H N N 359 MET HE2 H N N 360 MET HE3 H N N 361 MET HXT H N N 362 PHE N N N N 363 PHE CA C N S 364 PHE C C N N 365 PHE O O N N 366 PHE CB C N N 367 PHE CG C Y N 368 PHE CD1 C Y N 369 PHE CD2 C Y N 370 PHE CE1 C Y N 371 PHE CE2 C Y N 372 PHE CZ C Y N 373 PHE OXT O N N 374 PHE H H N N 375 PHE H2 H N N 376 PHE HA H N N 377 PHE HB2 H N N 378 PHE HB3 H N N 379 PHE HD1 H N N 380 PHE HD2 H N N 381 PHE HE1 H N N 382 PHE HE2 H N N 383 PHE HZ H N N 384 PHE HXT H N N 385 PRO N N N N 386 PRO CA C N S 387 PRO C C N N 388 PRO O O N N 389 PRO CB C N N 390 PRO CG C N N 391 PRO CD C N N 392 PRO OXT O N N 393 PRO H H N N 394 PRO HA H N N 395 PRO HB2 H N N 396 PRO HB3 H N N 397 PRO HG2 H N N 398 PRO HG3 H N N 399 PRO HD2 H N N 400 PRO HD3 H N N 401 PRO HXT H N N 402 SER N N N N 403 SER CA C N S 404 SER C C N N 405 SER O O N N 406 SER CB C N N 407 SER OG O N N 408 SER OXT O N N 409 SER H H N N 410 SER H2 H N N 411 SER HA H N N 412 SER HB2 H N N 413 SER HB3 H N N 414 SER HG H N N 415 SER HXT H N N 416 THR N N N N 417 THR CA C N S 418 THR C C N N 419 THR O O N N 420 THR CB C N R 421 THR OG1 O N N 422 THR CG2 C N N 423 THR OXT O N N 424 THR H H N N 425 THR H2 H N N 426 THR HA H N N 427 THR HB H N N 428 THR HG1 H N N 429 THR HG21 H N N 430 THR HG22 H N N 431 THR HG23 H N N 432 THR HXT H N N 433 TRP N N N N 434 TRP CA C N S 435 TRP C C N N 436 TRP O O N N 437 TRP CB C N N 438 TRP CG C Y N 439 TRP CD1 C Y N 440 TRP CD2 C Y N 441 TRP NE1 N Y N 442 TRP CE2 C Y N 443 TRP CE3 C Y N 444 TRP CZ2 C Y N 445 TRP CZ3 C Y N 446 TRP CH2 C Y N 447 TRP OXT O N N 448 TRP H H N N 449 TRP H2 H N N 450 TRP HA H N N 451 TRP HB2 H N N 452 TRP HB3 H N N 453 TRP HD1 H N N 454 TRP HE1 H N N 455 TRP HE3 H N N 456 TRP HZ2 H N N 457 TRP HZ3 H N N 458 TRP HH2 H N N 459 TRP HXT H N N 460 TYR N N N N 461 TYR CA C N S 462 TYR C C N N 463 TYR O O N N 464 TYR CB C N N 465 TYR CG C Y N 466 TYR CD1 C Y N 467 TYR CD2 C Y N 468 TYR CE1 C Y N 469 TYR CE2 C Y N 470 TYR CZ C Y N 471 TYR OH O N N 472 TYR OXT O N N 473 TYR H H N N 474 TYR H2 H N N 475 TYR HA H N N 476 TYR HB2 H N N 477 TYR HB3 H N N 478 TYR HD1 H N N 479 TYR HD2 H N N 480 TYR HE1 H N N 481 TYR HE2 H N N 482 TYR HH H N N 483 TYR HXT H N N 484 U OP3 O N N 485 U P P N N 486 U OP1 O N N 487 U OP2 O N N 488 U "O5'" O N N 489 U "C5'" C N N 490 U "C4'" C N R 491 U "O4'" O N N 492 U "C3'" C N S 493 U "O3'" O N N 494 U "C2'" C N R 495 U "O2'" O N N 496 U "C1'" C N R 497 U N1 N N N 498 U C2 C N N 499 U O2 O N N 500 U N3 N N N 501 U C4 C N N 502 U O4 O N N 503 U C5 C N N 504 U C6 C N N 505 U HOP3 H N N 506 U HOP2 H N N 507 U "H5'" H N N 508 U "H5''" H N N 509 U "H4'" H N N 510 U "H3'" H N N 511 U "HO3'" H N N 512 U "H2'" H N N 513 U "HO2'" H N N 514 U "H1'" H N N 515 U H3 H N N 516 U H5 H N N 517 U H6 H N N 518 VAL N N N N 519 VAL CA C N S 520 VAL C C N N 521 VAL O O N N 522 VAL CB C N N 523 VAL CG1 C N N 524 VAL CG2 C N N 525 VAL OXT O N N 526 VAL H H N N 527 VAL H2 H N N 528 VAL HA H N N 529 VAL HB H N N 530 VAL HG11 H N N 531 VAL HG12 H N N 532 VAL HG13 H N N 533 VAL HG21 H N N 534 VAL HG22 H N N 535 VAL HG23 H N N 536 VAL HXT H N N 537 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MZ C4 C5 sing Y N 1 6MZ C4 N9 sing Y N 2 6MZ C2 N3 sing Y N 3 6MZ C4 N3 doub Y N 4 6MZ C2 N1 doub Y N 5 6MZ C5 C6 doub Y N 6 6MZ N1 C6 sing Y N 7 6MZ C6 N6 sing N N 8 6MZ N6 C9 sing N N 9 6MZ C5 N7 sing Y N 10 6MZ N9 C8 sing Y N 11 6MZ N7 C8 doub Y N 12 6MZ "O5'" "C5'" sing N N 13 6MZ "C1'" "H1'" sing N N 14 6MZ C9 H9C1 sing N N 15 6MZ C9 H9C2 sing N N 16 6MZ "C5'" "H5'1" sing N N 17 6MZ "C5'" "H5'2" sing N N 18 6MZ "C4'" "H4'" sing N N 19 6MZ "C3'" "H3'" sing N N 20 6MZ "C2'" "H2'" sing N N 21 6MZ "O2'" HA sing N N 22 6MZ "O3'" HB sing N N 23 6MZ O3P H3P sing N N 24 6MZ "C5'" "C4'" sing N N 25 6MZ "C4'" "O4'" sing N N 26 6MZ N9 "C1'" sing N N 27 6MZ "O4'" "C1'" sing N N 28 6MZ "C1'" "C2'" sing N N 29 6MZ "C2'" "O2'" sing N N 30 6MZ "C4'" "C3'" sing N N 31 6MZ "C2'" "C3'" sing N N 32 6MZ "C3'" "O3'" sing N N 33 6MZ O1P P sing N N 34 6MZ O2P P doub N N 35 6MZ "O5'" P sing N N 36 6MZ P O3P sing N N 37 6MZ C2 H2 sing N N 38 6MZ O1P H1P sing N N 39 6MZ C8 H8 sing N N 40 6MZ N6 H6 sing N N 41 6MZ C9 H9 sing N N 42 ALA N CA sing N N 43 ALA N H sing N N 44 ALA N H2 sing N N 45 ALA CA C sing N N 46 ALA CA CB sing N N 47 ALA CA HA sing N N 48 ALA C O doub N N 49 ALA C OXT sing N N 50 ALA CB HB1 sing N N 51 ALA CB HB2 sing N N 52 ALA CB HB3 sing N N 53 ALA OXT HXT sing N N 54 ARG N CA sing N N 55 ARG N H sing N N 56 ARG N H2 sing N N 57 ARG CA C sing N N 58 ARG CA CB sing N N 59 ARG CA HA sing N N 60 ARG C O doub N N 61 ARG C OXT sing N N 62 ARG CB CG sing N N 63 ARG CB HB2 sing N N 64 ARG CB HB3 sing N N 65 ARG CG CD sing N N 66 ARG CG HG2 sing N N 67 ARG CG HG3 sing N N 68 ARG CD NE sing N N 69 ARG CD HD2 sing N N 70 ARG CD HD3 sing N N 71 ARG NE CZ sing N N 72 ARG NE HE sing N N 73 ARG CZ NH1 sing N N 74 ARG CZ NH2 doub N N 75 ARG NH1 HH11 sing N N 76 ARG NH1 HH12 sing N N 77 ARG NH2 HH21 sing N N 78 ARG NH2 HH22 sing N N 79 ARG OXT HXT sing N N 80 ASN N CA sing N N 81 ASN N H sing N N 82 ASN N H2 sing N N 83 ASN CA C sing N N 84 ASN CA CB sing N N 85 ASN CA HA sing N N 86 ASN C O doub N N 87 ASN C OXT sing N N 88 ASN CB CG sing N N 89 ASN CB HB2 sing N N 90 ASN CB HB3 sing N N 91 ASN CG OD1 doub N N 92 ASN CG ND2 sing N N 93 ASN ND2 HD21 sing N N 94 ASN ND2 HD22 sing N N 95 ASN OXT HXT sing N N 96 ASP N CA sing N N 97 ASP N H sing N N 98 ASP N H2 sing N N 99 ASP CA C sing N N 100 ASP CA CB sing N N 101 ASP CA HA sing N N 102 ASP C O doub N N 103 ASP C OXT sing N N 104 ASP CB CG sing N N 105 ASP CB HB2 sing N N 106 ASP CB HB3 sing N N 107 ASP CG OD1 doub N N 108 ASP CG OD2 sing N N 109 ASP OD2 HD2 sing N N 110 ASP OXT HXT sing N N 111 C OP3 P sing N N 112 C OP3 HOP3 sing N N 113 C P OP1 doub N N 114 C P OP2 sing N N 115 C P "O5'" sing N N 116 C OP2 HOP2 sing N N 117 C "O5'" "C5'" sing N N 118 C "C5'" "C4'" sing N N 119 C "C5'" "H5'" sing N N 120 C "C5'" "H5''" sing N N 121 C "C4'" "O4'" sing N N 122 C "C4'" "C3'" sing N N 123 C "C4'" "H4'" sing N N 124 C "O4'" "C1'" sing N N 125 C "C3'" "O3'" sing N N 126 C "C3'" "C2'" sing N N 127 C "C3'" "H3'" sing N N 128 C "O3'" "HO3'" sing N N 129 C "C2'" "O2'" sing N N 130 C "C2'" "C1'" sing N N 131 C "C2'" "H2'" sing N N 132 C "O2'" "HO2'" sing N N 133 C "C1'" N1 sing N N 134 C "C1'" "H1'" sing N N 135 C N1 C2 sing N N 136 C N1 C6 sing N N 137 C C2 O2 doub N N 138 C C2 N3 sing N N 139 C N3 C4 doub N N 140 C C4 N4 sing N N 141 C C4 C5 sing N N 142 C N4 H41 sing N N 143 C N4 H42 sing N N 144 C C5 C6 doub N N 145 C C5 H5 sing N N 146 C C6 H6 sing N N 147 CYS N CA sing N N 148 CYS N H sing N N 149 CYS N H2 sing N N 150 CYS CA C sing N N 151 CYS CA CB sing N N 152 CYS CA HA sing N N 153 CYS C O doub N N 154 CYS C OXT sing N N 155 CYS CB SG sing N N 156 CYS CB HB2 sing N N 157 CYS CB HB3 sing N N 158 CYS SG HG sing N N 159 CYS OXT HXT sing N N 160 G OP3 P sing N N 161 G OP3 HOP3 sing N N 162 G P OP1 doub N N 163 G P OP2 sing N N 164 G P "O5'" sing N N 165 G OP2 HOP2 sing N N 166 G "O5'" "C5'" sing N N 167 G "C5'" "C4'" sing N N 168 G "C5'" "H5'" sing N N 169 G "C5'" "H5''" sing N N 170 G "C4'" "O4'" sing N N 171 G "C4'" "C3'" sing N N 172 G "C4'" "H4'" sing N N 173 G "O4'" "C1'" sing N N 174 G "C3'" "O3'" sing N N 175 G "C3'" "C2'" sing N N 176 G "C3'" "H3'" sing N N 177 G "O3'" "HO3'" sing N N 178 G "C2'" "O2'" sing N N 179 G "C2'" "C1'" sing N N 180 G "C2'" "H2'" sing N N 181 G "O2'" "HO2'" sing N N 182 G "C1'" N9 sing N N 183 G "C1'" "H1'" sing N N 184 G N9 C8 sing Y N 185 G N9 C4 sing Y N 186 G C8 N7 doub Y N 187 G C8 H8 sing N N 188 G N7 C5 sing Y N 189 G C5 C6 sing N N 190 G C5 C4 doub Y N 191 G C6 O6 doub N N 192 G C6 N1 sing N N 193 G N1 C2 sing N N 194 G N1 H1 sing N N 195 G C2 N2 sing N N 196 G C2 N3 doub N N 197 G N2 H21 sing N N 198 G N2 H22 sing N N 199 G N3 C4 sing N N 200 GLN N CA sing N N 201 GLN N H sing N N 202 GLN N H2 sing N N 203 GLN CA C sing N N 204 GLN CA CB sing N N 205 GLN CA HA sing N N 206 GLN C O doub N N 207 GLN C OXT sing N N 208 GLN CB CG sing N N 209 GLN CB HB2 sing N N 210 GLN CB HB3 sing N N 211 GLN CG CD sing N N 212 GLN CG HG2 sing N N 213 GLN CG HG3 sing N N 214 GLN CD OE1 doub N N 215 GLN CD NE2 sing N N 216 GLN NE2 HE21 sing N N 217 GLN NE2 HE22 sing N N 218 GLN OXT HXT sing N N 219 GLU N CA sing N N 220 GLU N H sing N N 221 GLU N H2 sing N N 222 GLU CA C sing N N 223 GLU CA CB sing N N 224 GLU CA HA sing N N 225 GLU C O doub N N 226 GLU C OXT sing N N 227 GLU CB CG sing N N 228 GLU CB HB2 sing N N 229 GLU CB HB3 sing N N 230 GLU CG CD sing N N 231 GLU CG HG2 sing N N 232 GLU CG HG3 sing N N 233 GLU CD OE1 doub N N 234 GLU CD OE2 sing N N 235 GLU OE2 HE2 sing N N 236 GLU OXT HXT sing N N 237 GLY N CA sing N N 238 GLY N H sing N N 239 GLY N H2 sing N N 240 GLY CA C sing N N 241 GLY CA HA2 sing N N 242 GLY CA HA3 sing N N 243 GLY C O doub N N 244 GLY C OXT sing N N 245 GLY OXT HXT sing N N 246 HIS N CA sing N N 247 HIS N H sing N N 248 HIS N H2 sing N N 249 HIS CA C sing N N 250 HIS CA CB sing N N 251 HIS CA HA sing N N 252 HIS C O doub N N 253 HIS C OXT sing N N 254 HIS CB CG sing N N 255 HIS CB HB2 sing N N 256 HIS CB HB3 sing N N 257 HIS CG ND1 sing Y N 258 HIS CG CD2 doub Y N 259 HIS ND1 CE1 doub Y N 260 HIS ND1 HD1 sing N N 261 HIS CD2 NE2 sing Y N 262 HIS CD2 HD2 sing N N 263 HIS CE1 NE2 sing Y N 264 HIS CE1 HE1 sing N N 265 HIS NE2 HE2 sing N N 266 HIS OXT HXT sing N N 267 HOH O H1 sing N N 268 HOH O H2 sing N N 269 ILE N CA sing N N 270 ILE N H sing N N 271 ILE N H2 sing N N 272 ILE CA C sing N N 273 ILE CA CB sing N N 274 ILE CA HA sing N N 275 ILE C O doub N N 276 ILE C OXT sing N N 277 ILE CB CG1 sing N N 278 ILE CB CG2 sing N N 279 ILE CB HB sing N N 280 ILE CG1 CD1 sing N N 281 ILE CG1 HG12 sing N N 282 ILE CG1 HG13 sing N N 283 ILE CG2 HG21 sing N N 284 ILE CG2 HG22 sing N N 285 ILE CG2 HG23 sing N N 286 ILE CD1 HD11 sing N N 287 ILE CD1 HD12 sing N N 288 ILE CD1 HD13 sing N N 289 ILE OXT HXT sing N N 290 LEU N CA sing N N 291 LEU N H sing N N 292 LEU N H2 sing N N 293 LEU CA C sing N N 294 LEU CA CB sing N N 295 LEU CA HA sing N N 296 LEU C O doub N N 297 LEU C OXT sing N N 298 LEU CB CG sing N N 299 LEU CB HB2 sing N N 300 LEU CB HB3 sing N N 301 LEU CG CD1 sing N N 302 LEU CG CD2 sing N N 303 LEU CG HG sing N N 304 LEU CD1 HD11 sing N N 305 LEU CD1 HD12 sing N N 306 LEU CD1 HD13 sing N N 307 LEU CD2 HD21 sing N N 308 LEU CD2 HD22 sing N N 309 LEU CD2 HD23 sing N N 310 LEU OXT HXT sing N N 311 LYS N CA sing N N 312 LYS N H sing N N 313 LYS N H2 sing N N 314 LYS CA C sing N N 315 LYS CA CB sing N N 316 LYS CA HA sing N N 317 LYS C O doub N N 318 LYS C OXT sing N N 319 LYS CB CG sing N N 320 LYS CB HB2 sing N N 321 LYS CB HB3 sing N N 322 LYS CG CD sing N N 323 LYS CG HG2 sing N N 324 LYS CG HG3 sing N N 325 LYS CD CE sing N N 326 LYS CD HD2 sing N N 327 LYS CD HD3 sing N N 328 LYS CE NZ sing N N 329 LYS CE HE2 sing N N 330 LYS CE HE3 sing N N 331 LYS NZ HZ1 sing N N 332 LYS NZ HZ2 sing N N 333 LYS NZ HZ3 sing N N 334 LYS OXT HXT sing N N 335 MET N CA sing N N 336 MET N H sing N N 337 MET N H2 sing N N 338 MET CA C sing N N 339 MET CA CB sing N N 340 MET CA HA sing N N 341 MET C O doub N N 342 MET C OXT sing N N 343 MET CB CG sing N N 344 MET CB HB2 sing N N 345 MET CB HB3 sing N N 346 MET CG SD sing N N 347 MET CG HG2 sing N N 348 MET CG HG3 sing N N 349 MET SD CE sing N N 350 MET CE HE1 sing N N 351 MET CE HE2 sing N N 352 MET CE HE3 sing N N 353 MET OXT HXT sing N N 354 PHE N CA sing N N 355 PHE N H sing N N 356 PHE N H2 sing N N 357 PHE CA C sing N N 358 PHE CA CB sing N N 359 PHE CA HA sing N N 360 PHE C O doub N N 361 PHE C OXT sing N N 362 PHE CB CG sing N N 363 PHE CB HB2 sing N N 364 PHE CB HB3 sing N N 365 PHE CG CD1 doub Y N 366 PHE CG CD2 sing Y N 367 PHE CD1 CE1 sing Y N 368 PHE CD1 HD1 sing N N 369 PHE CD2 CE2 doub Y N 370 PHE CD2 HD2 sing N N 371 PHE CE1 CZ doub Y N 372 PHE CE1 HE1 sing N N 373 PHE CE2 CZ sing Y N 374 PHE CE2 HE2 sing N N 375 PHE CZ HZ sing N N 376 PHE OXT HXT sing N N 377 PRO N CA sing N N 378 PRO N CD sing N N 379 PRO N H sing N N 380 PRO CA C sing N N 381 PRO CA CB sing N N 382 PRO CA HA sing N N 383 PRO C O doub N N 384 PRO C OXT sing N N 385 PRO CB CG sing N N 386 PRO CB HB2 sing N N 387 PRO CB HB3 sing N N 388 PRO CG CD sing N N 389 PRO CG HG2 sing N N 390 PRO CG HG3 sing N N 391 PRO CD HD2 sing N N 392 PRO CD HD3 sing N N 393 PRO OXT HXT sing N N 394 SER N CA sing N N 395 SER N H sing N N 396 SER N H2 sing N N 397 SER CA C sing N N 398 SER CA CB sing N N 399 SER CA HA sing N N 400 SER C O doub N N 401 SER C OXT sing N N 402 SER CB OG sing N N 403 SER CB HB2 sing N N 404 SER CB HB3 sing N N 405 SER OG HG sing N N 406 SER OXT HXT sing N N 407 THR N CA sing N N 408 THR N H sing N N 409 THR N H2 sing N N 410 THR CA C sing N N 411 THR CA CB sing N N 412 THR CA HA sing N N 413 THR C O doub N N 414 THR C OXT sing N N 415 THR CB OG1 sing N N 416 THR CB CG2 sing N N 417 THR CB HB sing N N 418 THR OG1 HG1 sing N N 419 THR CG2 HG21 sing N N 420 THR CG2 HG22 sing N N 421 THR CG2 HG23 sing N N 422 THR OXT HXT sing N N 423 TRP N CA sing N N 424 TRP N H sing N N 425 TRP N H2 sing N N 426 TRP CA C sing N N 427 TRP CA CB sing N N 428 TRP CA HA sing N N 429 TRP C O doub N N 430 TRP C OXT sing N N 431 TRP CB CG sing N N 432 TRP CB HB2 sing N N 433 TRP CB HB3 sing N N 434 TRP CG CD1 doub Y N 435 TRP CG CD2 sing Y N 436 TRP CD1 NE1 sing Y N 437 TRP CD1 HD1 sing N N 438 TRP CD2 CE2 doub Y N 439 TRP CD2 CE3 sing Y N 440 TRP NE1 CE2 sing Y N 441 TRP NE1 HE1 sing N N 442 TRP CE2 CZ2 sing Y N 443 TRP CE3 CZ3 doub Y N 444 TRP CE3 HE3 sing N N 445 TRP CZ2 CH2 doub Y N 446 TRP CZ2 HZ2 sing N N 447 TRP CZ3 CH2 sing Y N 448 TRP CZ3 HZ3 sing N N 449 TRP CH2 HH2 sing N N 450 TRP OXT HXT sing N N 451 TYR N CA sing N N 452 TYR N H sing N N 453 TYR N H2 sing N N 454 TYR CA C sing N N 455 TYR CA CB sing N N 456 TYR CA HA sing N N 457 TYR C O doub N N 458 TYR C OXT sing N N 459 TYR CB CG sing N N 460 TYR CB HB2 sing N N 461 TYR CB HB3 sing N N 462 TYR CG CD1 doub Y N 463 TYR CG CD2 sing Y N 464 TYR CD1 CE1 sing Y N 465 TYR CD1 HD1 sing N N 466 TYR CD2 CE2 doub Y N 467 TYR CD2 HD2 sing N N 468 TYR CE1 CZ doub Y N 469 TYR CE1 HE1 sing N N 470 TYR CE2 CZ sing Y N 471 TYR CE2 HE2 sing N N 472 TYR CZ OH sing N N 473 TYR OH HH sing N N 474 TYR OXT HXT sing N N 475 U OP3 P sing N N 476 U OP3 HOP3 sing N N 477 U P OP1 doub N N 478 U P OP2 sing N N 479 U P "O5'" sing N N 480 U OP2 HOP2 sing N N 481 U "O5'" "C5'" sing N N 482 U "C5'" "C4'" sing N N 483 U "C5'" "H5'" sing N N 484 U "C5'" "H5''" sing N N 485 U "C4'" "O4'" sing N N 486 U "C4'" "C3'" sing N N 487 U "C4'" "H4'" sing N N 488 U "O4'" "C1'" sing N N 489 U "C3'" "O3'" sing N N 490 U "C3'" "C2'" sing N N 491 U "C3'" "H3'" sing N N 492 U "O3'" "HO3'" sing N N 493 U "C2'" "O2'" sing N N 494 U "C2'" "C1'" sing N N 495 U "C2'" "H2'" sing N N 496 U "O2'" "HO2'" sing N N 497 U "C1'" N1 sing N N 498 U "C1'" "H1'" sing N N 499 U N1 C2 sing N N 500 U N1 C6 sing N N 501 U C2 O2 doub N N 502 U C2 N3 sing N N 503 U N3 C4 sing N N 504 U N3 H3 sing N N 505 U C4 O4 doub N N 506 U C4 C5 sing N N 507 U C5 C6 doub N N 508 U C5 H5 sing N N 509 U C6 H6 sing N N 510 VAL N CA sing N N 511 VAL N H sing N N 512 VAL N H2 sing N N 513 VAL CA C sing N N 514 VAL CA CB sing N N 515 VAL CA HA sing N N 516 VAL C O doub N N 517 VAL C OXT sing N N 518 VAL CB CG1 sing N N 519 VAL CB CG2 sing N N 520 VAL CB HB sing N N 521 VAL CG1 HG11 sing N N 522 VAL CG1 HG12 sing N N 523 VAL CG1 HG13 sing N N 524 VAL CG2 HG21 sing N N 525 VAL CG2 HG22 sing N N 526 VAL CG2 HG23 sing N N 527 VAL OXT HXT sing N N 528 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 4R3H 'PDB ENTRIES 4R3H AND 4RCI' 2 ? 'experimental model' PDB 4RCI 'PDB ENTRIES 4R3H AND 4RCI' #