data_4RDX # _entry.id 4RDX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RDX pdb_00004rdx 10.2210/pdb4rdx/pdb NDB NA3205 ? ? RCSB RCSB087225 ? ? WWPDB D_1000087225 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RDX _pdbx_database_status.recvd_initial_deposition_date 2014-09-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xie, W.' 1 ? 'Tian, Q.' 2 ? 'Wang, C.' 3 ? # _citation.id primary _citation.title 'Structural basis for recognition of G-1-containing tRNA by histidyl-tRNA synthetase' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 43 _citation.page_first 2980 _citation.page_last 2990 _citation.year 2015 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25722375 _citation.pdbx_database_id_DOI 10.1093/nar/gkv129 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tian, Q.' 1 ? primary 'Wang, C.' 2 ? primary 'Liu, Y.' 3 ? primary 'Xie, W.' 4 ? # _cell.entry_id 4RDX _cell.length_a 84.061 _cell.length_b 159.703 _cell.length_c 123.988 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RDX _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histidine--tRNA ligase' 47264.129 1 6.1.1.21 ? 'histidinyl-tRNA synthetase' ? 2 polymer syn 'tRNA(his)' 25327.889 1 ? ? ? ? 3 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 4 non-polymer syn HISTIDINE 156.162 1 ? ? ? ? 5 water nat water 18.015 76 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Histidyl-tRNA synthetase, HisRS' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPMTARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTL RPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR LKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLK EVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEA EGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKR LATGEQVRLSREEVPGYLLQALG ; ;GPMTARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTL RPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR LKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLK EVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEA EGFGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKR LATGEQVRLSREEVPGYLLQALG ; A ? 2 polyribonucleotide no yes ;(GTP)GUGAGCGUAGCUCAGCUGGUUAGAGCACCGGACUGUGGAUCCGGGGGUCGUGGGUUCAAGUCCCAUCGCUCACCC CA ; GGUGAGCGUAGCUCAGCUGGUUAGAGCACCGGACUGUGGAUCCGGGGGUCGUGGGUUCAAGUCCCAUCGCUCACCCCA C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 MET n 1 4 THR n 1 5 ALA n 1 6 ARG n 1 7 ALA n 1 8 VAL n 1 9 ARG n 1 10 GLY n 1 11 THR n 1 12 LYS n 1 13 ASP n 1 14 LEU n 1 15 PHE n 1 16 GLY n 1 17 LYS n 1 18 GLU n 1 19 LEU n 1 20 ARG n 1 21 MET n 1 22 HIS n 1 23 GLN n 1 24 ARG n 1 25 ILE n 1 26 VAL n 1 27 ALA n 1 28 THR n 1 29 ALA n 1 30 ARG n 1 31 LYS n 1 32 VAL n 1 33 LEU n 1 34 GLU n 1 35 ALA n 1 36 ALA n 1 37 GLY n 1 38 ALA n 1 39 LEU n 1 40 GLU n 1 41 LEU n 1 42 VAL n 1 43 THR n 1 44 PRO n 1 45 ILE n 1 46 PHE n 1 47 GLU n 1 48 GLU n 1 49 THR n 1 50 GLN n 1 51 VAL n 1 52 PHE n 1 53 GLU n 1 54 LYS n 1 55 GLY n 1 56 VAL n 1 57 GLY n 1 58 ALA n 1 59 ALA n 1 60 THR n 1 61 ASP n 1 62 ILE n 1 63 VAL n 1 64 ARG n 1 65 LYS n 1 66 GLU n 1 67 MET n 1 68 PHE n 1 69 THR n 1 70 PHE n 1 71 GLN n 1 72 ASP n 1 73 ARG n 1 74 GLY n 1 75 GLY n 1 76 ARG n 1 77 SER n 1 78 LEU n 1 79 THR n 1 80 LEU n 1 81 ARG n 1 82 PRO n 1 83 GLU n 1 84 GLY n 1 85 THR n 1 86 ALA n 1 87 ALA n 1 88 MET n 1 89 VAL n 1 90 ARG n 1 91 ALA n 1 92 TYR n 1 93 LEU n 1 94 GLU n 1 95 HIS n 1 96 GLY n 1 97 MET n 1 98 LYS n 1 99 VAL n 1 100 TRP n 1 101 PRO n 1 102 GLN n 1 103 PRO n 1 104 VAL n 1 105 ARG n 1 106 LEU n 1 107 TRP n 1 108 MET n 1 109 ALA n 1 110 GLY n 1 111 PRO n 1 112 MET n 1 113 PHE n 1 114 ARG n 1 115 ALA n 1 116 GLU n 1 117 ARG n 1 118 PRO n 1 119 GLN n 1 120 LYS n 1 121 GLY n 1 122 ARG n 1 123 TYR n 1 124 ARG n 1 125 GLN n 1 126 PHE n 1 127 HIS n 1 128 GLN n 1 129 VAL n 1 130 ASN n 1 131 TYR n 1 132 GLU n 1 133 ALA n 1 134 LEU n 1 135 GLY n 1 136 SER n 1 137 GLU n 1 138 ASN n 1 139 PRO n 1 140 ILE n 1 141 LEU n 1 142 ASP n 1 143 ALA n 1 144 GLU n 1 145 ALA n 1 146 VAL n 1 147 VAL n 1 148 LEU n 1 149 LEU n 1 150 TYR n 1 151 GLU n 1 152 CYS n 1 153 LEU n 1 154 LYS n 1 155 GLU n 1 156 LEU n 1 157 GLY n 1 158 LEU n 1 159 ARG n 1 160 ARG n 1 161 LEU n 1 162 LYS n 1 163 VAL n 1 164 LYS n 1 165 LEU n 1 166 SER n 1 167 SER n 1 168 VAL n 1 169 GLY n 1 170 ASP n 1 171 PRO n 1 172 GLU n 1 173 ASP n 1 174 ARG n 1 175 ALA n 1 176 ARG n 1 177 TYR n 1 178 ASN n 1 179 ALA n 1 180 TYR n 1 181 LEU n 1 182 ARG n 1 183 GLU n 1 184 VAL n 1 185 LEU n 1 186 SER n 1 187 PRO n 1 188 HIS n 1 189 ARG n 1 190 GLU n 1 191 ALA n 1 192 LEU n 1 193 SER n 1 194 GLU n 1 195 ASP n 1 196 SER n 1 197 LYS n 1 198 GLU n 1 199 ARG n 1 200 LEU n 1 201 GLU n 1 202 LEU n 1 203 ASN n 1 204 PRO n 1 205 MET n 1 206 ARG n 1 207 ILE n 1 208 LEU n 1 209 ASP n 1 210 SER n 1 211 LYS n 1 212 SER n 1 213 GLU n 1 214 ARG n 1 215 ASP n 1 216 GLN n 1 217 ALA n 1 218 LEU n 1 219 LEU n 1 220 LYS n 1 221 GLU n 1 222 LEU n 1 223 GLY n 1 224 VAL n 1 225 ARG n 1 226 PRO n 1 227 MET n 1 228 LEU n 1 229 ASP n 1 230 PHE n 1 231 LEU n 1 232 GLY n 1 233 GLU n 1 234 GLU n 1 235 ALA n 1 236 ARG n 1 237 ALA n 1 238 HIS n 1 239 LEU n 1 240 LYS n 1 241 GLU n 1 242 VAL n 1 243 GLU n 1 244 ARG n 1 245 HIS n 1 246 LEU n 1 247 GLU n 1 248 ARG n 1 249 LEU n 1 250 SER n 1 251 VAL n 1 252 PRO n 1 253 TYR n 1 254 GLU n 1 255 LEU n 1 256 GLU n 1 257 PRO n 1 258 ALA n 1 259 LEU n 1 260 VAL n 1 261 ARG n 1 262 GLY n 1 263 LEU n 1 264 ASP n 1 265 TYR n 1 266 TYR n 1 267 VAL n 1 268 ARG n 1 269 THR n 1 270 ALA n 1 271 PHE n 1 272 GLU n 1 273 VAL n 1 274 HIS n 1 275 HIS n 1 276 GLU n 1 277 GLU n 1 278 ILE n 1 279 GLY n 1 280 ALA n 1 281 GLN n 1 282 SER n 1 283 ALA n 1 284 LEU n 1 285 GLY n 1 286 GLY n 1 287 GLY n 1 288 GLY n 1 289 ARG n 1 290 TYR n 1 291 ASP n 1 292 GLY n 1 293 LEU n 1 294 SER n 1 295 GLU n 1 296 LEU n 1 297 LEU n 1 298 GLY n 1 299 GLY n 1 300 PRO n 1 301 ARG n 1 302 VAL n 1 303 PRO n 1 304 GLY n 1 305 VAL n 1 306 GLY n 1 307 PHE n 1 308 ALA n 1 309 PHE n 1 310 GLY n 1 311 VAL n 1 312 GLU n 1 313 ARG n 1 314 VAL n 1 315 ALA n 1 316 LEU n 1 317 ALA n 1 318 LEU n 1 319 GLU n 1 320 ALA n 1 321 GLU n 1 322 GLY n 1 323 PHE n 1 324 GLY n 1 325 LEU n 1 326 PRO n 1 327 GLU n 1 328 GLU n 1 329 LYS n 1 330 GLY n 1 331 PRO n 1 332 ASP n 1 333 LEU n 1 334 TYR n 1 335 LEU n 1 336 ILE n 1 337 PRO n 1 338 LEU n 1 339 THR n 1 340 GLU n 1 341 GLU n 1 342 ALA n 1 343 VAL n 1 344 ALA n 1 345 GLU n 1 346 ALA n 1 347 PHE n 1 348 TYR n 1 349 LEU n 1 350 ALA n 1 351 GLU n 1 352 ALA n 1 353 LEU n 1 354 ARG n 1 355 PRO n 1 356 ARG n 1 357 LEU n 1 358 ARG n 1 359 ALA n 1 360 GLU n 1 361 TYR n 1 362 ALA n 1 363 LEU n 1 364 ALA n 1 365 PRO n 1 366 ARG n 1 367 LYS n 1 368 PRO n 1 369 ALA n 1 370 LYS n 1 371 GLY n 1 372 LEU n 1 373 GLU n 1 374 GLU n 1 375 ALA n 1 376 LEU n 1 377 LYS n 1 378 ARG n 1 379 GLY n 1 380 ALA n 1 381 ALA n 1 382 PHE n 1 383 ALA n 1 384 GLY n 1 385 PHE n 1 386 LEU n 1 387 GLY n 1 388 GLU n 1 389 ASP n 1 390 GLU n 1 391 LEU n 1 392 ARG n 1 393 ALA n 1 394 GLY n 1 395 GLU n 1 396 VAL n 1 397 THR n 1 398 LEU n 1 399 LYS n 1 400 ARG n 1 401 LEU n 1 402 ALA n 1 403 THR n 1 404 GLY n 1 405 GLU n 1 406 GLN n 1 407 VAL n 1 408 ARG n 1 409 LEU n 1 410 SER n 1 411 ARG n 1 412 GLU n 1 413 GLU n 1 414 VAL n 1 415 PRO n 1 416 GLY n 1 417 TYR n 1 418 LEU n 1 419 LEU n 1 420 GLN n 1 421 ALA n 1 422 LEU n 1 423 GLY n 2 1 GTP n 2 2 G n 2 3 U n 2 4 G n 2 5 A n 2 6 G n 2 7 C n 2 8 G n 2 9 U n 2 10 A n 2 11 G n 2 12 C n 2 13 U n 2 14 C n 2 15 A n 2 16 G n 2 17 C n 2 18 U n 2 19 G n 2 20 G n 2 21 U n 2 22 U n 2 23 A n 2 24 G n 2 25 A n 2 26 G n 2 27 C n 2 28 A n 2 29 C n 2 30 C n 2 31 G n 2 32 G n 2 33 A n 2 34 C n 2 35 U n 2 36 G n 2 37 U n 2 38 G n 2 39 G n 2 40 A n 2 41 U n 2 42 C n 2 43 C n 2 44 G n 2 45 G n 2 46 G n 2 47 G n 2 48 G n 2 49 U n 2 50 C n 2 51 G n 2 52 U n 2 53 G n 2 54 G n 2 55 G n 2 56 U n 2 57 U n 2 58 C n 2 59 A n 2 60 A n 2 61 G n 2 62 U n 2 63 C n 2 64 C n 2 65 C n 2 66 A n 2 67 U n 2 68 C n 2 69 G n 2 70 C n 2 71 U n 2 72 C n 2 73 A n 2 74 C n 2 75 C n 2 76 C n 2 77 C n 2 78 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'hisS, TT_C0360' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'HB27 / ATCC BAA-163 / DSM 7039' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus HB27' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 262724 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET28a(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Thermus thermophilus HB27' _pdbx_entity_src_syn.organism_common_name 'Thermus thermophilus str. HB27' _pdbx_entity_src_syn.ncbi_taxonomy_id 262724 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SYH_THET2 P62374 1 ;MTARAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRP EGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRRLK VKLSSVGDPEDRARYNAYLREVLSPHREALSEDSKERLELNPMRILDSKSERDQALLKELGVRPMLDFLGEEARAHLKEV ERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVPGVGFAFGVERVALALEAEG FGLPEEKGPDLYLIPLTEEAVAEAFYLAEALRPRLRAEYALAPRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLA TGEQVRLSREEVPGYLLQALG ; 1 ? 2 GB AE017221 46197919 2 GGUGAGCGUAGCUCAGCUGGUUAGAGCACCGGACUGUGGAUCCGGGGGUCGUGGGUUCAAGUCCCAUCGCUCACCCC 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RDX A 3 ? 423 ? P62374 1 ? 421 ? 1 421 2 2 4RDX C 1 ? 77 ? 46197919 1 ? 77 ? -1 75 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RDX GLY A 1 ? UNP P62374 ? ? 'expression tag' -1 1 1 4RDX PRO A 2 ? UNP P62374 ? ? 'expression tag' 0 2 2 4RDX A C 78 ? GB 46197919 ? ? 'expression tag' 76 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4RDX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.88 _exptl_crystal.density_percent_sol 57.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '5% PEG4000, 0.1M NaOAc pH4.5, EVAPORATION, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2014-03-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.99 # _reflns.entry_id 4RDX _reflns.observed_criterion_sigma_I 2.6 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.55 _reflns.number_obs 27099 _reflns.number_all 27434 _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.148 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.B_iso_Wilson_estimate 48.73 _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.55 _reflns_shell.d_res_low 2.55 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs 0.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2692 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4RDX _refine.ls_number_reflns_obs 27018 _refine.ls_number_reflns_all 27018 _refine.pdbx_ls_sigma_I 2.6 _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.469 _refine.ls_d_res_high 2.55 _refine.ls_percent_reflns_obs 97.86 _refine.ls_R_factor_obs 0.2100 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2073 _refine.ls_R_factor_R_free 0.2617 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.04 _refine.ls_number_reflns_R_free 1362 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model '1H4V and 3WC1' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details '5.04% of the reflections' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.39 _refine.pdbx_overall_phase_error 33.87 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3217 _refine_hist.pdbx_number_atoms_nucleic_acid 1654 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 76 _refine_hist.number_atoms_total 4981 _refine_hist.d_res_high 2.55 _refine_hist.d_res_low 29.469 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.003 ? ? 5159 ? 'X-RAY DIFFRACTION' f_angle_d 0.800 ? ? 7349 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 17.615 ? ? 2220 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.048 ? ? 866 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 667 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 10 2.55 2.6402 2329 0.3450 89.00 0.4373 . . 114 . . . . 'X-RAY DIFFRACTION' 10 2.6402 2.7458 2559 0.3018 99.00 0.3369 . . 142 . . . . 'X-RAY DIFFRACTION' 10 2.7458 2.8707 2574 0.2698 100.00 0.3228 . . 144 . . . . 'X-RAY DIFFRACTION' 10 2.8707 3.0219 2612 0.2531 100.00 0.3167 . . 133 . . . . 'X-RAY DIFFRACTION' 10 3.0219 3.2110 2586 0.2216 99.00 0.2878 . . 127 . . . . 'X-RAY DIFFRACTION' 10 3.2110 3.4586 2584 0.1991 100.00 0.2489 . . 147 . . . . 'X-RAY DIFFRACTION' 10 3.4586 3.8060 2618 0.1738 100.00 0.2386 . . 124 . . . . 'X-RAY DIFFRACTION' 10 3.8060 4.3552 2585 0.1737 99.00 0.2258 . . 149 . . . . 'X-RAY DIFFRACTION' 10 4.3552 5.4813 2617 0.1788 98.00 0.2174 . . 136 . . . . 'X-RAY DIFFRACTION' 10 5.4813 29.4710 2592 0.2074 94.00 0.2583 . . 146 . . . . # _struct.entry_id 4RDX _struct.title 'Structure of histidinyl-tRNA synthetase in complex with tRNA(His)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RDX _struct_keywords.pdbx_keywords LIGASE/RNA _struct_keywords.text 'aminoacyl-tRNA synthetase, classII aaRS, aminoacylation, histidine, tRNA, LIGASE-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 16 ? ALA A 36 ? GLY A 14 ALA A 34 1 ? 21 HELX_P HELX_P2 2 GLN A 50 ? PHE A 52 ? GLN A 48 PHE A 50 5 ? 3 HELX_P HELX_P3 3 GLY A 84 ? HIS A 95 ? GLY A 82 HIS A 93 1 ? 12 HELX_P HELX_P4 4 GLY A 96 ? TRP A 100 ? GLY A 94 TRP A 98 5 ? 5 HELX_P HELX_P5 5 ASN A 138 ? GLY A 157 ? ASN A 136 GLY A 155 1 ? 20 HELX_P HELX_P6 6 ASP A 170 ? SER A 186 ? ASP A 168 SER A 184 1 ? 17 HELX_P HELX_P7 7 PRO A 187 ? LEU A 192 ? PRO A 185 LEU A 190 5 ? 6 HELX_P HELX_P8 8 SER A 193 ? ASN A 203 ? SER A 191 ASN A 201 1 ? 11 HELX_P HELX_P9 9 PRO A 204 ? SER A 210 ? PRO A 202 SER A 208 5 ? 7 HELX_P HELX_P10 10 SER A 212 ? LEU A 222 ? SER A 210 LEU A 220 1 ? 11 HELX_P HELX_P11 11 PRO A 226 ? LEU A 231 ? PRO A 224 LEU A 229 5 ? 6 HELX_P HELX_P12 12 GLY A 232 ? LEU A 249 ? GLY A 230 LEU A 247 1 ? 18 HELX_P HELX_P13 13 GLY A 292 ? LEU A 297 ? GLY A 290 LEU A 295 1 ? 6 HELX_P HELX_P14 14 VAL A 311 ? GLU A 321 ? VAL A 309 GLU A 319 1 ? 11 HELX_P HELX_P15 15 GLU A 341 ? ARG A 354 ? GLU A 339 ARG A 352 1 ? 14 HELX_P HELX_P16 16 LYS A 367 ? ARG A 378 ? LYS A 365 ARG A 376 1 ? 12 HELX_P HELX_P17 17 GLY A 387 ? GLY A 394 ? GLY A 385 GLY A 392 1 ? 8 HELX_P HELX_P18 18 GLU A 413 ? LEU A 422 ? GLU A 411 LEU A 420 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? C GTP -1 C G 1 1_555 ? ? ? ? ? ? ? 1.599 ? ? hydrog1 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B C 75 N3 ? ? C GTP -1 C C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B GTP 1 N2 ? ? ? 1_555 B C 75 O2 ? ? C GTP -1 C C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B C 75 N4 ? ? C GTP -1 C C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 74 N3 ? ? C G 1 C C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 74 O2 ? ? C G 1 C C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 74 N4 ? ? C G 1 C C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B U 3 N3 ? ? ? 1_555 B A 73 N1 ? ? C U 2 C A 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B U 3 O4 ? ? ? 1_555 B A 73 N6 ? ? C U 2 C A 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 72 N3 ? ? C G 3 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 72 O2 ? ? C G 3 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 72 N4 ? ? C G 3 C C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B A 5 N1 ? ? ? 1_555 B U 71 N3 ? ? C A 4 C U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B A 5 N6 ? ? ? 1_555 B U 71 O4 ? ? C A 4 C U 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 70 N3 ? ? C G 5 C C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 70 O2 ? ? C G 5 C C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 70 N4 ? ? C G 5 C C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B C 7 N3 ? ? ? 1_555 B G 69 N1 ? ? C C 6 C G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 69 O6 ? ? C C 6 C G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B C 7 O2 ? ? ? 1_555 B G 69 N2 ? ? C C 6 C G 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B G 8 N1 ? ? ? 1_555 B C 68 N3 ? ? C G 7 C C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B G 8 N2 ? ? ? 1_555 B C 68 O2 ? ? C G 7 C C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B G 8 O6 ? ? ? 1_555 B C 68 N4 ? ? C G 7 C C 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 15 N7 ? ? C U 8 C A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog24 hydrog ? ? B U 9 O2 ? ? ? 1_555 B A 15 N6 ? ? C U 8 C A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog25 hydrog ? ? B A 10 N6 ? ? ? 1_555 B A 25 N7 ? ? C A 9 C A 23 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog26 hydrog ? ? B A 10 N7 ? ? ? 1_555 B A 25 N6 ? ? C A 9 C A 23 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog27 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 27 N3 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 27 O2 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 27 N4 ? ? C G 10 C C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B G 11 O6 ? ? ? 1_555 B G 47 N2 ? ? C G 10 C G 45 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog31 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 26 N1 ? ? C C 11 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 26 O6 ? ? C C 11 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 26 N2 ? ? C C 11 C G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B U 13 N3 ? ? ? 1_555 B A 25 N1 ? ? C U 12 C A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B U 13 O4 ? ? ? 1_555 B A 25 N6 ? ? C U 12 C A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B C 14 N3 ? ? ? 1_555 B G 24 N1 ? ? C C 13 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B C 14 N4 ? ? ? 1_555 B G 24 O6 ? ? C C 13 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B C 14 O2 ? ? ? 1_555 B G 24 N2 ? ? C C 13 C G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 16 N1 ? ? ? 1_555 B C 50 O2 ? ? C G 15 C C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog40 hydrog ? ? B G 16 N2 ? ? ? 1_555 B C 50 N3 ? ? C G 15 C C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog41 hydrog ? ? B G 19 N1 ? ? ? 1_555 B U 57 O2 ? ? C G 18 C U 55 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog42 hydrog ? ? B G 20 N1 ? ? ? 1_555 B C 58 N3 ? ? C G 19 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 58 O2 ? ? C G 19 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B G 20 O6 ? ? ? 1_555 B C 58 N4 ? ? C G 19 C C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B G 24 N7 ? ? ? 1_555 B G 48 N1 ? ? C G 22 C G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog46 hydrog ? ? B G 24 O6 ? ? ? 1_555 B G 48 N2 ? ? C G 22 C G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog47 hydrog ? ? B A 28 N6 ? ? ? 1_555 B G 45 O6 ? ? C A 26 C G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog48 hydrog ? ? B C 29 O2 ? ? ? 1_555 B G 45 N2 ? ? C C 27 C G 43 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog49 hydrog ? ? B C 30 N3 ? ? ? 1_555 B G 44 N1 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B C 30 N4 ? ? ? 1_555 B G 44 O6 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B C 30 O2 ? ? ? 1_555 B G 44 N2 ? ? C C 28 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B G 31 N1 ? ? ? 1_555 B C 43 N3 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B G 31 N2 ? ? ? 1_555 B C 43 O2 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B G 31 O6 ? ? ? 1_555 B C 43 N4 ? ? C G 29 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B G 32 N1 ? ? ? 1_555 B C 42 N3 ? ? C G 30 C C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B G 32 N2 ? ? ? 1_555 B C 42 O2 ? ? C G 30 C C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B G 32 O6 ? ? ? 1_555 B C 42 N4 ? ? C G 30 C C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B A 33 N7 ? ? ? 1_555 B U 41 N3 ? ? C A 31 C U 39 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog59 hydrog ? ? B G 51 N1 ? ? ? 1_555 B U 67 O2 ? ? C G 49 C U 65 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog60 hydrog ? ? B G 51 O6 ? ? ? 1_555 B U 67 N3 ? ? C G 49 C U 65 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog61 hydrog ? ? B U 52 N3 ? ? ? 1_555 B A 66 N1 ? ? C U 50 C A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B U 52 O4 ? ? ? 1_555 B A 66 N6 ? ? C U 50 C A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B G 53 N1 ? ? ? 1_555 B C 65 N3 ? ? C G 51 C C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B G 53 N2 ? ? ? 1_555 B C 65 O2 ? ? C G 51 C C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B G 53 O6 ? ? ? 1_555 B C 65 N4 ? ? C G 51 C C 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B G 54 N1 ? ? ? 1_555 B C 64 N3 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B G 54 N2 ? ? ? 1_555 B C 64 O2 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 54 O6 ? ? ? 1_555 B C 64 N4 ? ? C G 52 C C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B G 55 N1 ? ? ? 1_555 B C 63 N3 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B G 55 N2 ? ? ? 1_555 B C 63 O2 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B G 55 O6 ? ? ? 1_555 B C 63 N4 ? ? C G 53 C C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B U 56 N3 ? ? ? 1_555 B A 60 N7 ? ? C U 54 C A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog73 hydrog ? ? B U 56 O2 ? ? ? 1_555 B A 60 N6 ? ? C U 54 C A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLN 102 A . ? GLN 100 A PRO 103 A ? PRO 101 A 1 -3.24 2 ARG 354 A . ? ARG 352 A PRO 355 A ? PRO 353 A 1 -9.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 3 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 39 ? GLU A 40 ? LEU A 37 GLU A 38 A 2 VAL A 104 ? PHE A 113 ? VAL A 102 PHE A 111 A 3 GLN A 125 ? LEU A 134 ? GLN A 123 LEU A 132 A 4 GLY A 304 ? GLY A 310 ? GLY A 302 GLY A 308 A 5 ALA A 283 ? TYR A 290 ? ALA A 281 TYR A 288 A 6 TYR A 266 ? HIS A 275 ? TYR A 264 HIS A 273 A 7 LEU A 161 ? SER A 167 ? LEU A 159 SER A 165 A 8 GLU A 254 ? LEU A 255 ? GLU A 252 LEU A 253 B 1 PHE A 46 ? GLU A 48 ? PHE A 44 GLU A 46 B 2 SER A 77 ? LEU A 80 ? SER A 75 LEU A 78 B 3 THR A 69 ? GLN A 71 ? THR A 67 GLN A 69 C 1 ALA A 359 ? TYR A 361 ? ALA A 357 TYR A 359 C 2 LEU A 333 ? PRO A 337 ? LEU A 331 PRO A 335 C 3 PHE A 382 ? LEU A 386 ? PHE A 380 LEU A 384 C 4 GLU A 395 ? ARG A 400 ? GLU A 393 ARG A 398 C 5 GLN A 406 ? SER A 410 ? GLN A 404 SER A 408 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 39 ? N LEU A 37 O ARG A 105 ? O ARG A 103 A 2 3 N MET A 108 ? N MET A 106 O ASN A 130 ? O ASN A 128 A 3 4 N ALA A 133 ? N ALA A 131 O VAL A 305 ? O VAL A 303 A 4 5 O ALA A 308 ? O ALA A 306 N GLY A 286 ? N GLY A 284 A 5 6 O GLY A 285 ? O GLY A 283 N VAL A 273 ? N VAL A 271 A 6 7 O GLU A 272 ? O GLU A 270 N LYS A 164 ? N LYS A 162 A 7 8 N VAL A 163 ? N VAL A 161 O GLU A 254 ? O GLU A 252 B 1 2 N GLU A 47 ? N GLU A 45 O THR A 79 ? O THR A 77 B 2 3 O LEU A 78 ? O LEU A 76 N PHE A 70 ? N PHE A 68 C 1 2 O GLU A 360 ? O GLU A 358 N LEU A 335 ? N LEU A 333 C 2 3 N TYR A 334 ? N TYR A 332 O GLY A 384 ? O GLY A 382 C 3 4 N ALA A 383 ? N ALA A 381 O LYS A 399 ? O LYS A 397 C 4 5 N LEU A 398 ? N LEU A 396 O VAL A 407 ? O VAL A 405 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A AMP 501 ? 17 'BINDING SITE FOR RESIDUE AMP A 501' AC2 Software A HIS 502 ? 9 'BINDING SITE FOR RESIDUE HIS A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ARG A 114 ? ARG A 112 . ? 1_555 ? 2 AC1 17 GLY A 121 ? GLY A 119 . ? 1_555 ? 3 AC1 17 ARG A 122 ? ARG A 120 . ? 1_555 ? 4 AC1 17 TYR A 123 ? TYR A 121 . ? 1_555 ? 5 AC1 17 PHE A 126 ? PHE A 124 . ? 1_555 ? 6 AC1 17 GLN A 128 ? GLN A 126 . ? 1_555 ? 7 AC1 17 ALA A 283 ? ALA A 281 . ? 1_555 ? 8 AC1 17 LEU A 284 ? LEU A 282 . ? 1_555 ? 9 AC1 17 GLY A 285 ? GLY A 283 . ? 1_555 ? 10 AC1 17 ALA A 308 ? ALA A 306 . ? 1_555 ? 11 AC1 17 GLY A 310 ? GLY A 308 . ? 1_555 ? 12 AC1 17 ARG A 313 ? ARG A 311 . ? 1_555 ? 13 AC1 17 HIS D . ? HIS A 502 . ? 1_555 ? 14 AC1 17 HOH E . ? HOH A 602 . ? 1_555 ? 15 AC1 17 HOH E . ? HOH A 619 . ? 1_555 ? 16 AC1 17 C B 77 ? C C 75 . ? 1_555 ? 17 AC1 17 A B 78 ? A C 76 . ? 1_555 ? 18 AC2 9 THR A 85 ? THR A 83 . ? 1_555 ? 19 AC2 9 GLU A 132 ? GLU A 130 . ? 1_555 ? 20 AC2 9 TYR A 266 ? TYR A 264 . ? 1_555 ? 21 AC2 9 GLY A 286 ? GLY A 284 . ? 1_555 ? 22 AC2 9 GLY A 287 ? GLY A 285 . ? 1_555 ? 23 AC2 9 GLY A 306 ? GLY A 304 . ? 1_555 ? 24 AC2 9 PHE A 307 ? PHE A 305 . ? 1_555 ? 25 AC2 9 AMP C . ? AMP A 501 . ? 1_555 ? 26 AC2 9 A B 78 ? A C 76 . ? 1_555 ? # _database_PDB_matrix.entry_id 4RDX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4RDX _atom_sites.fract_transf_matrix[1][1] 0.011896 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006262 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008065 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 PRO 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 THR 4 2 2 THR THR A . n A 1 5 ALA 5 3 3 ALA ALA A . n A 1 6 ARG 6 4 4 ARG ARG A . n A 1 7 ALA 7 5 5 ALA ALA A . n A 1 8 VAL 8 6 6 VAL VAL A . n A 1 9 ARG 9 7 7 ARG ARG A . n A 1 10 GLY 10 8 8 GLY GLY A . n A 1 11 THR 11 9 9 THR THR A . n A 1 12 LYS 12 10 10 LYS LYS A . n A 1 13 ASP 13 11 11 ASP ASP A . n A 1 14 LEU 14 12 12 LEU LEU A . n A 1 15 PHE 15 13 13 PHE PHE A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 LYS 17 15 15 LYS LYS A . n A 1 18 GLU 18 16 16 GLU GLU A . n A 1 19 LEU 19 17 17 LEU LEU A . n A 1 20 ARG 20 18 18 ARG ARG A . n A 1 21 MET 21 19 19 MET MET A . n A 1 22 HIS 22 20 20 HIS HIS A . n A 1 23 GLN 23 21 21 GLN GLN A . n A 1 24 ARG 24 22 22 ARG ARG A . n A 1 25 ILE 25 23 23 ILE ILE A . n A 1 26 VAL 26 24 24 VAL VAL A . n A 1 27 ALA 27 25 25 ALA ALA A . n A 1 28 THR 28 26 26 THR THR A . n A 1 29 ALA 29 27 27 ALA ALA A . n A 1 30 ARG 30 28 28 ARG ARG A . n A 1 31 LYS 31 29 29 LYS LYS A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 LEU 33 31 31 LEU LEU A . n A 1 34 GLU 34 32 32 GLU GLU A . n A 1 35 ALA 35 33 33 ALA ALA A . n A 1 36 ALA 36 34 34 ALA ALA A . n A 1 37 GLY 37 35 35 GLY GLY A . n A 1 38 ALA 38 36 36 ALA ALA A . n A 1 39 LEU 39 37 37 LEU LEU A . n A 1 40 GLU 40 38 38 GLU GLU A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 VAL 42 40 40 VAL VAL A . n A 1 43 THR 43 41 41 THR THR A . n A 1 44 PRO 44 42 42 PRO PRO A . n A 1 45 ILE 45 43 43 ILE ILE A . n A 1 46 PHE 46 44 44 PHE PHE A . n A 1 47 GLU 47 45 45 GLU GLU A . n A 1 48 GLU 48 46 46 GLU GLU A . n A 1 49 THR 49 47 47 THR THR A . n A 1 50 GLN 50 48 48 GLN GLN A . n A 1 51 VAL 51 49 49 VAL VAL A . n A 1 52 PHE 52 50 50 PHE PHE A . n A 1 53 GLU 53 51 51 GLU GLU A . n A 1 54 LYS 54 52 52 LYS LYS A . n A 1 55 GLY 55 53 ? ? ? A . n A 1 56 VAL 56 54 ? ? ? A . n A 1 57 GLY 57 55 ? ? ? A . n A 1 58 ALA 58 56 ? ? ? A . n A 1 59 ALA 59 57 ? ? ? A . n A 1 60 THR 60 58 ? ? ? A . n A 1 61 ASP 61 59 ? ? ? A . n A 1 62 ILE 62 60 ? ? ? A . n A 1 63 VAL 63 61 ? ? ? A . n A 1 64 ARG 64 62 ? ? ? A . n A 1 65 LYS 65 63 ? ? ? A . n A 1 66 GLU 66 64 64 GLU GLU A . n A 1 67 MET 67 65 65 MET MET A . n A 1 68 PHE 68 66 66 PHE PHE A . n A 1 69 THR 69 67 67 THR THR A . n A 1 70 PHE 70 68 68 PHE PHE A . n A 1 71 GLN 71 69 69 GLN GLN A . n A 1 72 ASP 72 70 70 ASP ASP A . n A 1 73 ARG 73 71 71 ARG ARG A . n A 1 74 GLY 74 72 72 GLY GLY A . n A 1 75 GLY 75 73 73 GLY GLY A . n A 1 76 ARG 76 74 74 ARG ARG A . n A 1 77 SER 77 75 75 SER SER A . n A 1 78 LEU 78 76 76 LEU LEU A . n A 1 79 THR 79 77 77 THR THR A . n A 1 80 LEU 80 78 78 LEU LEU A . n A 1 81 ARG 81 79 79 ARG ARG A . n A 1 82 PRO 82 80 80 PRO PRO A . n A 1 83 GLU 83 81 81 GLU GLU A . n A 1 84 GLY 84 82 82 GLY GLY A . n A 1 85 THR 85 83 83 THR THR A . n A 1 86 ALA 86 84 84 ALA ALA A . n A 1 87 ALA 87 85 85 ALA ALA A . n A 1 88 MET 88 86 86 MET MET A . n A 1 89 VAL 89 87 87 VAL VAL A . n A 1 90 ARG 90 88 88 ARG ARG A . n A 1 91 ALA 91 89 89 ALA ALA A . n A 1 92 TYR 92 90 90 TYR TYR A . n A 1 93 LEU 93 91 91 LEU LEU A . n A 1 94 GLU 94 92 92 GLU GLU A . n A 1 95 HIS 95 93 93 HIS HIS A . n A 1 96 GLY 96 94 94 GLY GLY A . n A 1 97 MET 97 95 95 MET MET A . n A 1 98 LYS 98 96 96 LYS LYS A . n A 1 99 VAL 99 97 97 VAL VAL A . n A 1 100 TRP 100 98 98 TRP TRP A . n A 1 101 PRO 101 99 99 PRO PRO A . n A 1 102 GLN 102 100 100 GLN GLN A . n A 1 103 PRO 103 101 101 PRO PRO A . n A 1 104 VAL 104 102 102 VAL VAL A . n A 1 105 ARG 105 103 103 ARG ARG A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 TRP 107 105 105 TRP TRP A . n A 1 108 MET 108 106 106 MET MET A . n A 1 109 ALA 109 107 107 ALA ALA A . n A 1 110 GLY 110 108 108 GLY GLY A . n A 1 111 PRO 111 109 109 PRO PRO A . n A 1 112 MET 112 110 110 MET MET A . n A 1 113 PHE 113 111 111 PHE PHE A . n A 1 114 ARG 114 112 112 ARG ARG A . n A 1 115 ALA 115 113 113 ALA ALA A . n A 1 116 GLU 116 114 114 GLU GLU A . n A 1 117 ARG 117 115 115 ARG ARG A . n A 1 118 PRO 118 116 116 PRO PRO A . n A 1 119 GLN 119 117 117 GLN GLN A . n A 1 120 LYS 120 118 118 LYS LYS A . n A 1 121 GLY 121 119 119 GLY GLY A . n A 1 122 ARG 122 120 120 ARG ARG A . n A 1 123 TYR 123 121 121 TYR TYR A . n A 1 124 ARG 124 122 122 ARG ARG A . n A 1 125 GLN 125 123 123 GLN GLN A . n A 1 126 PHE 126 124 124 PHE PHE A . n A 1 127 HIS 127 125 125 HIS HIS A . n A 1 128 GLN 128 126 126 GLN GLN A . n A 1 129 VAL 129 127 127 VAL VAL A . n A 1 130 ASN 130 128 128 ASN ASN A . n A 1 131 TYR 131 129 129 TYR TYR A . n A 1 132 GLU 132 130 130 GLU GLU A . n A 1 133 ALA 133 131 131 ALA ALA A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 GLY 135 133 133 GLY GLY A . n A 1 136 SER 136 134 134 SER SER A . n A 1 137 GLU 137 135 135 GLU GLU A . n A 1 138 ASN 138 136 136 ASN ASN A . n A 1 139 PRO 139 137 137 PRO PRO A . n A 1 140 ILE 140 138 138 ILE ILE A . n A 1 141 LEU 141 139 139 LEU LEU A . n A 1 142 ASP 142 140 140 ASP ASP A . n A 1 143 ALA 143 141 141 ALA ALA A . n A 1 144 GLU 144 142 142 GLU GLU A . n A 1 145 ALA 145 143 143 ALA ALA A . n A 1 146 VAL 146 144 144 VAL VAL A . n A 1 147 VAL 147 145 145 VAL VAL A . n A 1 148 LEU 148 146 146 LEU LEU A . n A 1 149 LEU 149 147 147 LEU LEU A . n A 1 150 TYR 150 148 148 TYR TYR A . n A 1 151 GLU 151 149 149 GLU GLU A . n A 1 152 CYS 152 150 150 CYS CYS A . n A 1 153 LEU 153 151 151 LEU LEU A . n A 1 154 LYS 154 152 152 LYS LYS A . n A 1 155 GLU 155 153 153 GLU GLU A . n A 1 156 LEU 156 154 154 LEU LEU A . n A 1 157 GLY 157 155 155 GLY GLY A . n A 1 158 LEU 158 156 156 LEU LEU A . n A 1 159 ARG 159 157 157 ARG ARG A . n A 1 160 ARG 160 158 158 ARG ARG A . n A 1 161 LEU 161 159 159 LEU LEU A . n A 1 162 LYS 162 160 160 LYS LYS A . n A 1 163 VAL 163 161 161 VAL VAL A . n A 1 164 LYS 164 162 162 LYS LYS A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 SER 166 164 164 SER SER A . n A 1 167 SER 167 165 165 SER SER A . n A 1 168 VAL 168 166 166 VAL VAL A . n A 1 169 GLY 169 167 167 GLY GLY A . n A 1 170 ASP 170 168 168 ASP ASP A . n A 1 171 PRO 171 169 169 PRO PRO A . n A 1 172 GLU 172 170 170 GLU GLU A . n A 1 173 ASP 173 171 171 ASP ASP A . n A 1 174 ARG 174 172 172 ARG ARG A . n A 1 175 ALA 175 173 173 ALA ALA A . n A 1 176 ARG 176 174 174 ARG ARG A . n A 1 177 TYR 177 175 175 TYR TYR A . n A 1 178 ASN 178 176 176 ASN ASN A . n A 1 179 ALA 179 177 177 ALA ALA A . n A 1 180 TYR 180 178 178 TYR TYR A . n A 1 181 LEU 181 179 179 LEU LEU A . n A 1 182 ARG 182 180 180 ARG ARG A . n A 1 183 GLU 183 181 181 GLU GLU A . n A 1 184 VAL 184 182 182 VAL VAL A . n A 1 185 LEU 185 183 183 LEU LEU A . n A 1 186 SER 186 184 184 SER SER A . n A 1 187 PRO 187 185 185 PRO PRO A . n A 1 188 HIS 188 186 186 HIS HIS A . n A 1 189 ARG 189 187 187 ARG ARG A . n A 1 190 GLU 190 188 188 GLU GLU A . n A 1 191 ALA 191 189 189 ALA ALA A . n A 1 192 LEU 192 190 190 LEU LEU A . n A 1 193 SER 193 191 191 SER SER A . n A 1 194 GLU 194 192 192 GLU GLU A . n A 1 195 ASP 195 193 193 ASP ASP A . n A 1 196 SER 196 194 194 SER SER A . n A 1 197 LYS 197 195 195 LYS LYS A . n A 1 198 GLU 198 196 196 GLU GLU A . n A 1 199 ARG 199 197 197 ARG ARG A . n A 1 200 LEU 200 198 198 LEU LEU A . n A 1 201 GLU 201 199 199 GLU GLU A . n A 1 202 LEU 202 200 200 LEU LEU A . n A 1 203 ASN 203 201 201 ASN ASN A . n A 1 204 PRO 204 202 202 PRO PRO A . n A 1 205 MET 205 203 203 MET MET A . n A 1 206 ARG 206 204 204 ARG ARG A . n A 1 207 ILE 207 205 205 ILE ILE A . n A 1 208 LEU 208 206 206 LEU LEU A . n A 1 209 ASP 209 207 207 ASP ASP A . n A 1 210 SER 210 208 208 SER SER A . n A 1 211 LYS 211 209 209 LYS LYS A . n A 1 212 SER 212 210 210 SER SER A . n A 1 213 GLU 213 211 211 GLU GLU A . n A 1 214 ARG 214 212 212 ARG ARG A . n A 1 215 ASP 215 213 213 ASP ASP A . n A 1 216 GLN 216 214 214 GLN GLN A . n A 1 217 ALA 217 215 215 ALA ALA A . n A 1 218 LEU 218 216 216 LEU LEU A . n A 1 219 LEU 219 217 217 LEU LEU A . n A 1 220 LYS 220 218 218 LYS LYS A . n A 1 221 GLU 221 219 219 GLU GLU A . n A 1 222 LEU 222 220 220 LEU LEU A . n A 1 223 GLY 223 221 221 GLY GLY A . n A 1 224 VAL 224 222 222 VAL VAL A . n A 1 225 ARG 225 223 223 ARG ARG A . n A 1 226 PRO 226 224 224 PRO PRO A . n A 1 227 MET 227 225 225 MET MET A . n A 1 228 LEU 228 226 226 LEU LEU A . n A 1 229 ASP 229 227 227 ASP ASP A . n A 1 230 PHE 230 228 228 PHE PHE A . n A 1 231 LEU 231 229 229 LEU LEU A . n A 1 232 GLY 232 230 230 GLY GLY A . n A 1 233 GLU 233 231 231 GLU GLU A . n A 1 234 GLU 234 232 232 GLU GLU A . n A 1 235 ALA 235 233 233 ALA ALA A . n A 1 236 ARG 236 234 234 ARG ARG A . n A 1 237 ALA 237 235 235 ALA ALA A . n A 1 238 HIS 238 236 236 HIS HIS A . n A 1 239 LEU 239 237 237 LEU LEU A . n A 1 240 LYS 240 238 238 LYS LYS A . n A 1 241 GLU 241 239 239 GLU GLU A . n A 1 242 VAL 242 240 240 VAL VAL A . n A 1 243 GLU 243 241 241 GLU GLU A . n A 1 244 ARG 244 242 242 ARG ARG A . n A 1 245 HIS 245 243 243 HIS HIS A . n A 1 246 LEU 246 244 244 LEU LEU A . n A 1 247 GLU 247 245 245 GLU GLU A . n A 1 248 ARG 248 246 246 ARG ARG A . n A 1 249 LEU 249 247 247 LEU LEU A . n A 1 250 SER 250 248 248 SER SER A . n A 1 251 VAL 251 249 249 VAL VAL A . n A 1 252 PRO 252 250 250 PRO PRO A . n A 1 253 TYR 253 251 251 TYR TYR A . n A 1 254 GLU 254 252 252 GLU GLU A . n A 1 255 LEU 255 253 253 LEU LEU A . n A 1 256 GLU 256 254 254 GLU GLU A . n A 1 257 PRO 257 255 255 PRO PRO A . n A 1 258 ALA 258 256 256 ALA ALA A . n A 1 259 LEU 259 257 257 LEU LEU A . n A 1 260 VAL 260 258 258 VAL VAL A . n A 1 261 ARG 261 259 259 ARG ARG A . n A 1 262 GLY 262 260 260 GLY GLY A . n A 1 263 LEU 263 261 261 LEU LEU A . n A 1 264 ASP 264 262 262 ASP ASP A . n A 1 265 TYR 265 263 263 TYR TYR A . n A 1 266 TYR 266 264 264 TYR TYR A . n A 1 267 VAL 267 265 265 VAL VAL A . n A 1 268 ARG 268 266 266 ARG ARG A . n A 1 269 THR 269 267 267 THR THR A . n A 1 270 ALA 270 268 268 ALA ALA A . n A 1 271 PHE 271 269 269 PHE PHE A . n A 1 272 GLU 272 270 270 GLU GLU A . n A 1 273 VAL 273 271 271 VAL VAL A . n A 1 274 HIS 274 272 272 HIS HIS A . n A 1 275 HIS 275 273 273 HIS HIS A . n A 1 276 GLU 276 274 274 GLU GLU A . n A 1 277 GLU 277 275 275 GLU GLU A . n A 1 278 ILE 278 276 276 ILE ILE A . n A 1 279 GLY 279 277 277 GLY GLY A . n A 1 280 ALA 280 278 278 ALA ALA A . n A 1 281 GLN 281 279 279 GLN GLN A . n A 1 282 SER 282 280 280 SER SER A . n A 1 283 ALA 283 281 281 ALA ALA A . n A 1 284 LEU 284 282 282 LEU LEU A . n A 1 285 GLY 285 283 283 GLY GLY A . n A 1 286 GLY 286 284 284 GLY GLY A . n A 1 287 GLY 287 285 285 GLY GLY A . n A 1 288 GLY 288 286 286 GLY GLY A . n A 1 289 ARG 289 287 287 ARG ARG A . n A 1 290 TYR 290 288 288 TYR TYR A . n A 1 291 ASP 291 289 289 ASP ASP A . n A 1 292 GLY 292 290 290 GLY GLY A . n A 1 293 LEU 293 291 291 LEU LEU A . n A 1 294 SER 294 292 292 SER SER A . n A 1 295 GLU 295 293 293 GLU GLU A . n A 1 296 LEU 296 294 294 LEU LEU A . n A 1 297 LEU 297 295 295 LEU LEU A . n A 1 298 GLY 298 296 296 GLY GLY A . n A 1 299 GLY 299 297 297 GLY GLY A . n A 1 300 PRO 300 298 298 PRO PRO A . n A 1 301 ARG 301 299 299 ARG ARG A . n A 1 302 VAL 302 300 300 VAL VAL A . n A 1 303 PRO 303 301 301 PRO PRO A . n A 1 304 GLY 304 302 302 GLY GLY A . n A 1 305 VAL 305 303 303 VAL VAL A . n A 1 306 GLY 306 304 304 GLY GLY A . n A 1 307 PHE 307 305 305 PHE PHE A . n A 1 308 ALA 308 306 306 ALA ALA A . n A 1 309 PHE 309 307 307 PHE PHE A . n A 1 310 GLY 310 308 308 GLY GLY A . n A 1 311 VAL 311 309 309 VAL VAL A . n A 1 312 GLU 312 310 310 GLU GLU A . n A 1 313 ARG 313 311 311 ARG ARG A . n A 1 314 VAL 314 312 312 VAL VAL A . n A 1 315 ALA 315 313 313 ALA ALA A . n A 1 316 LEU 316 314 314 LEU LEU A . n A 1 317 ALA 317 315 315 ALA ALA A . n A 1 318 LEU 318 316 316 LEU LEU A . n A 1 319 GLU 319 317 317 GLU GLU A . n A 1 320 ALA 320 318 318 ALA ALA A . n A 1 321 GLU 321 319 319 GLU GLU A . n A 1 322 GLY 322 320 320 GLY GLY A . n A 1 323 PHE 323 321 321 PHE PHE A . n A 1 324 GLY 324 322 322 GLY GLY A . n A 1 325 LEU 325 323 323 LEU LEU A . n A 1 326 PRO 326 324 324 PRO PRO A . n A 1 327 GLU 327 325 325 GLU GLU A . n A 1 328 GLU 328 326 326 GLU GLU A . n A 1 329 LYS 329 327 327 LYS LYS A . n A 1 330 GLY 330 328 328 GLY GLY A . n A 1 331 PRO 331 329 329 PRO PRO A . n A 1 332 ASP 332 330 330 ASP ASP A . n A 1 333 LEU 333 331 331 LEU LEU A . n A 1 334 TYR 334 332 332 TYR TYR A . n A 1 335 LEU 335 333 333 LEU LEU A . n A 1 336 ILE 336 334 334 ILE ILE A . n A 1 337 PRO 337 335 335 PRO PRO A . n A 1 338 LEU 338 336 336 LEU LEU A . n A 1 339 THR 339 337 337 THR THR A . n A 1 340 GLU 340 338 338 GLU GLU A . n A 1 341 GLU 341 339 339 GLU GLU A . n A 1 342 ALA 342 340 340 ALA ALA A . n A 1 343 VAL 343 341 341 VAL VAL A . n A 1 344 ALA 344 342 342 ALA ALA A . n A 1 345 GLU 345 343 343 GLU GLU A . n A 1 346 ALA 346 344 344 ALA ALA A . n A 1 347 PHE 347 345 345 PHE PHE A . n A 1 348 TYR 348 346 346 TYR TYR A . n A 1 349 LEU 349 347 347 LEU LEU A . n A 1 350 ALA 350 348 348 ALA ALA A . n A 1 351 GLU 351 349 349 GLU GLU A . n A 1 352 ALA 352 350 350 ALA ALA A . n A 1 353 LEU 353 351 351 LEU LEU A . n A 1 354 ARG 354 352 352 ARG ARG A . n A 1 355 PRO 355 353 353 PRO PRO A . n A 1 356 ARG 356 354 354 ARG ARG A . n A 1 357 LEU 357 355 355 LEU LEU A . n A 1 358 ARG 358 356 356 ARG ARG A . n A 1 359 ALA 359 357 357 ALA ALA A . n A 1 360 GLU 360 358 358 GLU GLU A . n A 1 361 TYR 361 359 359 TYR TYR A . n A 1 362 ALA 362 360 360 ALA ALA A . n A 1 363 LEU 363 361 361 LEU LEU A . n A 1 364 ALA 364 362 362 ALA ALA A . n A 1 365 PRO 365 363 363 PRO PRO A . n A 1 366 ARG 366 364 364 ARG ARG A . n A 1 367 LYS 367 365 365 LYS LYS A . n A 1 368 PRO 368 366 366 PRO PRO A . n A 1 369 ALA 369 367 367 ALA ALA A . n A 1 370 LYS 370 368 368 LYS LYS A . n A 1 371 GLY 371 369 369 GLY GLY A . n A 1 372 LEU 372 370 370 LEU LEU A . n A 1 373 GLU 373 371 371 GLU GLU A . n A 1 374 GLU 374 372 372 GLU GLU A . n A 1 375 ALA 375 373 373 ALA ALA A . n A 1 376 LEU 376 374 374 LEU LEU A . n A 1 377 LYS 377 375 375 LYS LYS A . n A 1 378 ARG 378 376 376 ARG ARG A . n A 1 379 GLY 379 377 377 GLY GLY A . n A 1 380 ALA 380 378 378 ALA ALA A . n A 1 381 ALA 381 379 379 ALA ALA A . n A 1 382 PHE 382 380 380 PHE PHE A . n A 1 383 ALA 383 381 381 ALA ALA A . n A 1 384 GLY 384 382 382 GLY GLY A . n A 1 385 PHE 385 383 383 PHE PHE A . n A 1 386 LEU 386 384 384 LEU LEU A . n A 1 387 GLY 387 385 385 GLY GLY A . n A 1 388 GLU 388 386 386 GLU GLU A . n A 1 389 ASP 389 387 387 ASP ASP A . n A 1 390 GLU 390 388 388 GLU GLU A . n A 1 391 LEU 391 389 389 LEU LEU A . n A 1 392 ARG 392 390 390 ARG ARG A . n A 1 393 ALA 393 391 391 ALA ALA A . n A 1 394 GLY 394 392 392 GLY GLY A . n A 1 395 GLU 395 393 393 GLU GLU A . n A 1 396 VAL 396 394 394 VAL VAL A . n A 1 397 THR 397 395 395 THR THR A . n A 1 398 LEU 398 396 396 LEU LEU A . n A 1 399 LYS 399 397 397 LYS LYS A . n A 1 400 ARG 400 398 398 ARG ARG A . n A 1 401 LEU 401 399 399 LEU LEU A . n A 1 402 ALA 402 400 400 ALA ALA A . n A 1 403 THR 403 401 401 THR THR A . n A 1 404 GLY 404 402 402 GLY GLY A . n A 1 405 GLU 405 403 403 GLU GLU A . n A 1 406 GLN 406 404 404 GLN GLN A . n A 1 407 VAL 407 405 405 VAL VAL A . n A 1 408 ARG 408 406 406 ARG ARG A . n A 1 409 LEU 409 407 407 LEU LEU A . n A 1 410 SER 410 408 408 SER SER A . n A 1 411 ARG 411 409 409 ARG ARG A . n A 1 412 GLU 412 410 410 GLU GLU A . n A 1 413 GLU 413 411 411 GLU GLU A . n A 1 414 VAL 414 412 412 VAL VAL A . n A 1 415 PRO 415 413 413 PRO PRO A . n A 1 416 GLY 416 414 414 GLY GLY A . n A 1 417 TYR 417 415 415 TYR TYR A . n A 1 418 LEU 418 416 416 LEU LEU A . n A 1 419 LEU 419 417 417 LEU LEU A . n A 1 420 GLN 420 418 418 GLN GLN A . n A 1 421 ALA 421 419 419 ALA ALA A . n A 1 422 LEU 422 420 420 LEU LEU A . n A 1 423 GLY 423 421 421 GLY GLY A . n B 2 1 GTP 1 -1 -1 GTP GTP C . n B 2 2 G 2 1 1 G G C . n B 2 3 U 3 2 2 U U C . n B 2 4 G 4 3 3 G G C . n B 2 5 A 5 4 4 A A C . n B 2 6 G 6 5 5 G G C . n B 2 7 C 7 6 6 C C C . n B 2 8 G 8 7 7 G G C . n B 2 9 U 9 8 8 U U C . n B 2 10 A 10 9 9 A A C . n B 2 11 G 11 10 10 G G C . n B 2 12 C 12 11 11 C C C . n B 2 13 U 13 12 12 U U C . n B 2 14 C 14 13 13 C C C . n B 2 15 A 15 14 14 A A C . n B 2 16 G 16 15 15 G G C . n B 2 17 C 17 16 16 C C C . n B 2 18 U 18 17 17 U U C . n B 2 19 G 19 18 18 G G C . n B 2 20 G 20 19 19 G G C . n B 2 21 U 21 20 20 U U C . n B 2 22 U 22 20 20 U U C A n B 2 23 A 23 21 21 A A C . n B 2 24 G 24 22 22 G G C . n B 2 25 A 25 23 23 A A C . n B 2 26 G 26 24 24 G G C . n B 2 27 C 27 25 25 C C C . n B 2 28 A 28 26 26 A A C . n B 2 29 C 29 27 27 C C C . n B 2 30 C 30 28 28 C C C . n B 2 31 G 31 29 29 G G C . n B 2 32 G 32 30 30 G G C . n B 2 33 A 33 31 31 A A C . n B 2 34 C 34 32 32 C C C . n B 2 35 U 35 33 33 U U C . n B 2 36 G 36 34 34 G G C . n B 2 37 U 37 35 35 U U C . n B 2 38 G 38 36 36 G G C . n B 2 39 G 39 37 37 G G C . n B 2 40 A 40 38 ? ? ? C . n B 2 41 U 41 39 39 U U C . n B 2 42 C 42 40 40 C C C . n B 2 43 C 43 41 41 C C C . n B 2 44 G 44 42 42 G G C . n B 2 45 G 45 43 43 G G C . n B 2 46 G 46 44 44 G G C . n B 2 47 G 47 45 45 G G C . n B 2 48 G 48 46 46 G G C . n B 2 49 U 49 47 47 U U C . n B 2 50 C 50 48 48 C C C . n B 2 51 G 51 49 49 G G C . n B 2 52 U 52 50 50 U U C . n B 2 53 G 53 51 51 G G C . n B 2 54 G 54 52 52 G G C . n B 2 55 G 55 53 53 G G C . n B 2 56 U 56 54 54 U U C . n B 2 57 U 57 55 55 U U C . n B 2 58 C 58 56 56 C C C . n B 2 59 A 59 57 57 A A C . n B 2 60 A 60 58 58 A A C . n B 2 61 G 61 59 59 G G C . n B 2 62 U 62 60 60 U U C . n B 2 63 C 63 61 61 C C C . n B 2 64 C 64 62 62 C C C . n B 2 65 C 65 63 63 C C C . n B 2 66 A 66 64 64 A A C . n B 2 67 U 67 65 65 U U C . n B 2 68 C 68 66 66 C C C . n B 2 69 G 69 67 67 G G C . n B 2 70 C 70 68 68 C C C . n B 2 71 U 71 69 69 U U C . n B 2 72 C 72 70 70 C C C . n B 2 73 A 73 71 71 A A C . n B 2 74 C 74 72 72 C C C . n B 2 75 C 75 73 73 C C C . n B 2 76 C 76 74 74 C C C . n B 2 77 C 77 75 75 C C C . n B 2 78 A 78 76 76 A A C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 AMP 1 501 1 AMP AMP A . D 4 HIS 1 502 1 HIS HIS A . E 5 HOH 1 601 1 HOH HOH A . E 5 HOH 2 602 2 HOH HOH A . E 5 HOH 3 603 3 HOH HOH A . E 5 HOH 4 604 4 HOH HOH A . E 5 HOH 5 605 5 HOH HOH A . E 5 HOH 6 606 7 HOH HOH A . E 5 HOH 7 607 8 HOH HOH A . E 5 HOH 8 608 9 HOH HOH A . E 5 HOH 9 609 10 HOH HOH A . E 5 HOH 10 610 11 HOH HOH A . E 5 HOH 11 611 12 HOH HOH A . E 5 HOH 12 612 13 HOH HOH A . E 5 HOH 13 613 14 HOH HOH A . E 5 HOH 14 614 15 HOH HOH A . E 5 HOH 15 615 16 HOH HOH A . E 5 HOH 16 616 17 HOH HOH A . E 5 HOH 17 617 18 HOH HOH A . E 5 HOH 18 618 19 HOH HOH A . E 5 HOH 19 619 21 HOH HOH A . E 5 HOH 20 620 22 HOH HOH A . E 5 HOH 21 621 24 HOH HOH A . E 5 HOH 22 622 25 HOH HOH A . E 5 HOH 23 623 26 HOH HOH A . E 5 HOH 24 624 27 HOH HOH A . E 5 HOH 25 625 28 HOH HOH A . E 5 HOH 26 626 30 HOH HOH A . E 5 HOH 27 627 31 HOH HOH A . E 5 HOH 28 628 33 HOH HOH A . E 5 HOH 29 629 34 HOH HOH A . E 5 HOH 30 630 35 HOH HOH A . E 5 HOH 31 631 38 HOH HOH A . E 5 HOH 32 632 39 HOH HOH A . E 5 HOH 33 633 40 HOH HOH A . E 5 HOH 34 634 41 HOH HOH A . E 5 HOH 35 635 42 HOH HOH A . E 5 HOH 36 636 43 HOH HOH A . E 5 HOH 37 637 45 HOH HOH A . E 5 HOH 38 638 46 HOH HOH A . E 5 HOH 39 639 47 HOH HOH A . E 5 HOH 40 640 48 HOH HOH A . E 5 HOH 41 641 51 HOH HOH A . E 5 HOH 42 642 52 HOH HOH A . E 5 HOH 43 643 53 HOH HOH A . E 5 HOH 44 644 56 HOH HOH A . E 5 HOH 45 645 57 HOH HOH A . E 5 HOH 46 646 59 HOH HOH A . E 5 HOH 47 647 63 HOH HOH A . E 5 HOH 48 648 64 HOH HOH A . E 5 HOH 49 649 65 HOH HOH A . E 5 HOH 50 650 67 HOH HOH A . E 5 HOH 51 651 68 HOH HOH A . E 5 HOH 52 652 70 HOH HOH A . E 5 HOH 53 653 71 HOH HOH A . E 5 HOH 54 654 72 HOH HOH A . E 5 HOH 55 655 73 HOH HOH A . E 5 HOH 56 656 74 HOH HOH A . E 5 HOH 57 657 75 HOH HOH A . F 5 HOH 1 101 6 HOH HOH C . F 5 HOH 2 102 20 HOH HOH C . F 5 HOH 3 103 23 HOH HOH C . F 5 HOH 4 104 29 HOH HOH C . F 5 HOH 5 105 32 HOH HOH C . F 5 HOH 6 106 36 HOH HOH C . F 5 HOH 7 107 37 HOH HOH C . F 5 HOH 8 108 44 HOH HOH C . F 5 HOH 9 109 49 HOH HOH C . F 5 HOH 10 110 50 HOH HOH C . F 5 HOH 11 111 54 HOH HOH C . F 5 HOH 12 112 55 HOH HOH C . F 5 HOH 13 113 58 HOH HOH C . F 5 HOH 14 114 60 HOH HOH C . F 5 HOH 15 115 61 HOH HOH C . F 5 HOH 16 116 62 HOH HOH C . F 5 HOH 17 117 66 HOH HOH C . F 5 HOH 18 118 69 HOH HOH C . F 5 HOH 19 119 76 HOH HOH C . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id GTP _pdbx_struct_mod_residue.label_seq_id 1 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id GTP _pdbx_struct_mod_residue.auth_seq_id -1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id G _pdbx_struct_mod_residue.details "GUANOSINE-5'-TRIPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 18510 ? 1 MORE -91 ? 1 'SSA (A^2)' 53540 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_577 x,-y+2,-z+2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 319.4060000000 0.0000000000 0.0000000000 -1.0000000000 247.9760000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-03-25 2 'Structure model' 1 1 2017-05-17 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 37.2996 158.9661 129.3146 0.5690 0.4183 0.2700 -0.0023 -0.0257 -0.0240 2.4002 2.4031 1.6345 -0.4953 -0.3747 -0.8011 0.0261 -0.0542 0.0707 -0.0571 0.1646 0.0920 -0.1898 -0.2952 0.0328 'X-RAY DIFFRACTION' 2 ? refined 19.3135 152.4888 125.5182 0.5780 0.4228 0.4901 0.0373 -0.0142 -0.0208 5.4600 5.0296 4.9736 -1.1697 1.1697 -1.4224 0.0087 0.4409 -0.1995 0.1872 -0.5253 0.9537 -0.1250 0.0257 -0.5118 'X-RAY DIFFRACTION' 3 ? refined 34.9927 146.2112 131.3197 0.4471 0.3991 0.2677 -0.0011 -0.0059 -0.0136 1.7075 3.0984 1.5266 -0.7291 -0.0571 -0.2062 0.0450 -0.1266 0.1095 0.0906 -0.1073 0.1306 -0.2966 0.0862 0.0122 'X-RAY DIFFRACTION' 4 ? refined 42.6018 147.2224 145.3436 0.5829 0.5423 0.2730 -0.0170 -0.0101 0.0406 3.4985 4.7875 2.0618 2.6896 -1.4278 -1.6159 0.3375 -0.3192 0.0867 -0.6435 -0.1467 -0.2314 0.1510 -0.0572 0.4307 'X-RAY DIFFRACTION' 5 ? refined 16.8417 138.0021 155.8546 0.5902 0.5694 0.6134 -0.0330 0.1454 0.1178 0.6199 7.4752 2.2513 -0.4624 1.0188 0.6188 -0.2582 0.3447 -0.0185 -0.1139 -0.1347 1.5112 0.6671 0.0602 -0.4036 'X-RAY DIFFRACTION' 6 ? refined 13.5538 146.9892 152.9698 0.8631 0.7207 0.6697 0.1065 -0.0621 0.0811 7.0142 7.1543 7.8083 1.3307 -4.0757 1.3207 0.2778 0.1253 -0.1105 0.9740 0.6975 0.5215 -0.3932 -0.4634 -0.5573 'X-RAY DIFFRACTION' 7 ? refined 22.0578 147.0966 158.3262 0.7187 0.4828 0.5238 0.0635 0.0717 0.0634 3.8626 3.4044 3.8749 1.4663 -1.3935 -0.4577 0.0556 -0.2723 -0.1824 0.0999 0.6086 -0.1190 0.1050 -0.3034 -0.1301 'X-RAY DIFFRACTION' 8 ? refined 34.9748 136.0360 148.8448 0.6576 0.3734 0.3550 -0.0082 0.0036 0.0454 3.2620 0.6510 2.4036 0.6007 -2.6296 -0.1519 0.0727 -0.0442 0.1718 -0.1870 -0.1979 0.0703 0.3069 0.2681 0.0050 'X-RAY DIFFRACTION' 9 ? refined 40.1058 155.9702 149.6839 1.1768 0.5200 0.3132 0.0865 0.0121 0.0127 9.0024 2.0052 2.1543 6.4931 -2.7448 -1.1907 0.2570 -0.1217 -0.6172 -1.1613 0.8895 -0.1209 0.9255 -0.7852 0.4221 'X-RAY DIFFRACTION' 10 ? refined 37.0869 150.9620 137.7076 0.4841 0.3836 0.3104 0.0391 0.0604 0.0472 1.0715 1.0190 4.1599 -0.5462 -0.4985 -1.0002 0.0361 -0.1371 0.0382 -0.1415 -0.0229 -0.0686 0.4836 0.0380 0.1603 'X-RAY DIFFRACTION' 11 ? refined 53.9885 186.0871 116.8061 0.5483 0.4075 0.3183 -0.0979 -0.0230 -0.0174 6.4162 1.7237 7.2335 -0.2365 1.1013 -3.0476 0.1623 -0.1230 -0.0123 -0.2365 -0.1081 -0.0754 0.6411 -0.2694 0.0362 'X-RAY DIFFRACTION' 12 ? refined 63.5920 187.0863 118.7687 0.5963 0.5531 0.4946 -0.1024 -0.1679 -0.0367 6.7803 6.9103 9.6876 1.4996 -0.1802 -0.8764 0.3968 -0.1986 -0.0141 -0.5218 -0.0086 -0.8258 0.7283 -0.8470 0.4207 'X-RAY DIFFRACTION' 13 ? refined 18.641 170.617 149.904 0.4442 0.3368 0.1983 0.1116 0.3144 -0.0704 -0.1276 -0.0419 0.0086 0.0538 0.0534 0.0192 -0.2718 -0.2701 0.0000 -0.0026 0.7267 0.2157 0.8833 -0.9420 -0.1671 'X-RAY DIFFRACTION' 14 ? refined 29.7519 189.2896 147.5049 0.6506 0.8174 0.6228 0.1698 0.0876 -0.0653 0.0862 0.1942 0.0999 0.0381 0.2305 0.0511 0.0514 -0.0992 -0.0000 -0.6873 0.3133 0.0997 0.2511 0.2662 -0.5347 'X-RAY DIFFRACTION' 15 ? refined 24.4151 200.9197 149.5561 0.5112 0.1948 0.5496 -0.0827 0.0808 0.0182 -0.0240 0.0404 -0.0246 -0.0023 -0.0442 -0.0279 -0.2717 -0.1287 0.0000 -0.2801 -0.3273 -0.3854 0.1762 -0.4284 -0.4999 'X-RAY DIFFRACTION' 16 ? refined 42.8020 193.7463 134.5269 0.8824 0.6503 1.1021 -0.0061 0.2628 0.1731 -0.0194 0.0066 -0.0024 0.0023 -0.0153 0.0012 -0.2118 -0.0630 0.0000 0.0700 0.3095 -0.2551 0.0207 -0.1107 0.1844 'X-RAY DIFFRACTION' 17 ? refined 53.8650 206.9718 128.7582 2.2251 2.2082 1.5340 0.1448 -0.1891 -0.2621 0.0012 -0.0033 0.0029 -0.0007 0.0017 0.0031 -0.1267 -0.0094 -0.0000 0.0090 -0.0148 0.1892 0.0412 -0.0173 0.0324 'X-RAY DIFFRACTION' 18 ? refined 58.3723 197.1375 131.7570 1.0018 0.6234 0.6018 -0.2290 0.0221 -0.0674 -0.0019 -0.0166 0.0051 0.0245 -0.0338 0.0434 0.0285 -0.0214 0.0000 -0.4699 -0.0196 0.0631 -0.0620 0.2193 0.1910 'X-RAY DIFFRACTION' 19 ? refined 39.6156 202.6903 134.9231 1.2762 0.8496 1.2793 0.0863 0.0584 0.1281 -0.0081 -0.0028 0.0028 0.0165 0.0013 -0.0043 0.0779 -0.0306 0.0000 -0.0900 0.1496 -0.1623 0.1179 -0.1617 0.0182 'X-RAY DIFFRACTION' 20 ? refined 25.1690 193.8515 137.4113 0.6497 0.5422 0.6416 0.1357 0.2808 0.1593 0.0052 -0.0027 0.0085 -0.0038 -0.0228 0.0051 -0.0461 -0.3134 0.0000 0.1600 0.1556 0.1793 -0.3676 0.0375 0.0457 'X-RAY DIFFRACTION' 21 ? refined 11.5270 190.5592 148.4805 0.5603 0.2747 0.4858 0.1376 0.3794 -0.1685 -0.0806 -0.0030 -0.1548 -0.0543 -0.2230 0.1010 -0.0915 -0.8872 0.0000 0.1754 -0.0547 0.6727 0.3356 0.1486 0.2331 'X-RAY DIFFRACTION' 22 ? refined 22.5096 163.3578 145.0847 0.7102 0.3445 0.3946 0.0451 0.0568 -0.0060 -0.0158 0.0028 -0.0006 -0.0167 0.1124 -0.0533 0.1183 -0.1638 -0.0000 -0.0496 0.0073 0.1747 0.1852 -0.2797 -0.2585 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 2 A 48 '( CHAIN A AND RESID 2:48 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 49 A 81 '( CHAIN A AND RESID 49:81 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 82 A 147 '( CHAIN A AND RESID 82:147 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 148 A 169 '( CHAIN A AND RESID 148:169 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 170 A 192 '( CHAIN A AND RESID 170:192 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 193 A 200 '( CHAIN A AND RESID 193:200 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 201 A 218 '( CHAIN A AND RESID 201:218 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 219 A 270 '( CHAIN A AND RESID 219:270 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 A 271 A 275 '( CHAIN A AND RESID 271:275 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 A 276 A 326 '( CHAIN A AND RESID 276:326 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 A 327 A 369 '( CHAIN A AND RESID 327:369 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 12 12 A 370 A 421 '( CHAIN A AND RESID 370:421 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 13 13 C 1 C 7 '( CHAIN C AND RESID 1:7 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 14 14 C 8 C 17 '( CHAIN C AND RESID 8:17 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 15 15 C 18 C 23 '( CHAIN C AND RESID 18:23 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 16 16 C 24 C 29 '( CHAIN C AND RESID 24:29 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 17 17 C 30 C 33 '( CHAIN C AND RESID 30:33 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 18 18 C 34 C 40 '( CHAIN C AND RESID 34:40 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 19 19 C 41 C 44 '( CHAIN C AND RESID 41:44 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 20 20 C 45 C 48 '( CHAIN C AND RESID 45:48 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 21 21 C 49 C 65 '( CHAIN C AND RESID 49:65 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 22 22 C 66 C 76 '( CHAIN C AND RESID 66:76 )' ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NE2 A HIS 273 ? ? OE2 A GLU 319 ? ? 2.16 2 1 NH1 A ARG 122 ? ? O2B C GTP -1 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 117 ? ? -173.32 -172.43 2 1 SER A 164 ? ? -164.53 -169.21 3 1 LEU A 200 ? ? -143.48 -34.38 4 1 ARG A 266 ? ? 56.38 -126.52 5 1 GLU A 275 ? ? 57.99 -148.90 6 1 ILE A 276 ? ? 51.93 13.06 7 1 GLN A 279 ? ? -62.40 84.32 8 1 ASP A 289 ? ? -161.97 112.60 9 1 LEU A 420 ? ? -100.79 49.89 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 640 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.99 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 10 ? CG ? A LYS 12 CG 2 1 Y 1 A LYS 10 ? CD ? A LYS 12 CD 3 1 Y 1 A LYS 10 ? CE ? A LYS 12 CE 4 1 Y 1 A LYS 10 ? NZ ? A LYS 12 NZ 5 1 Y 1 A GLU 188 ? CG ? A GLU 190 CG 6 1 Y 1 A GLU 188 ? CD ? A GLU 190 CD 7 1 Y 1 A GLU 188 ? OE1 ? A GLU 190 OE1 8 1 Y 1 A GLU 188 ? OE2 ? A GLU 190 OE2 9 1 Y 1 A GLU 199 ? CG ? A GLU 201 CG 10 1 Y 1 A GLU 199 ? CD ? A GLU 201 CD 11 1 Y 1 A GLU 199 ? OE1 ? A GLU 201 OE1 12 1 Y 1 A GLU 199 ? OE2 ? A GLU 201 OE2 13 1 Y 1 A GLU 339 ? CG ? A GLU 341 CG 14 1 Y 1 A GLU 339 ? CD ? A GLU 341 CD 15 1 Y 1 A GLU 339 ? OE1 ? A GLU 341 OE1 16 1 Y 1 A GLU 339 ? OE2 ? A GLU 341 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A PRO 0 ? A PRO 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A GLY 53 ? A GLY 55 5 1 Y 1 A VAL 54 ? A VAL 56 6 1 Y 1 A GLY 55 ? A GLY 57 7 1 Y 1 A ALA 56 ? A ALA 58 8 1 Y 1 A ALA 57 ? A ALA 59 9 1 Y 1 A THR 58 ? A THR 60 10 1 Y 1 A ASP 59 ? A ASP 61 11 1 Y 1 A ILE 60 ? A ILE 62 12 1 Y 1 A VAL 61 ? A VAL 63 13 1 Y 1 A ARG 62 ? A ARG 64 14 1 Y 1 A LYS 63 ? A LYS 65 15 1 Y 1 C A 38 ? B A 40 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 AMP P P N N 51 AMP O1P O N N 52 AMP O2P O N N 53 AMP O3P O N N 54 AMP "O5'" O N N 55 AMP "C5'" C N N 56 AMP "C4'" C N R 57 AMP "O4'" O N N 58 AMP "C3'" C N S 59 AMP "O3'" O N N 60 AMP "C2'" C N R 61 AMP "O2'" O N N 62 AMP "C1'" C N R 63 AMP N9 N Y N 64 AMP C8 C Y N 65 AMP N7 N Y N 66 AMP C5 C Y N 67 AMP C6 C Y N 68 AMP N6 N N N 69 AMP N1 N Y N 70 AMP C2 C Y N 71 AMP N3 N Y N 72 AMP C4 C Y N 73 AMP HOP2 H N N 74 AMP HOP3 H N N 75 AMP "H5'1" H N N 76 AMP "H5'2" H N N 77 AMP "H4'" H N N 78 AMP "H3'" H N N 79 AMP "HO3'" H N N 80 AMP "H2'" H N N 81 AMP "HO2'" H N N 82 AMP "H1'" H N N 83 AMP H8 H N N 84 AMP HN61 H N N 85 AMP HN62 H N N 86 AMP H2 H N N 87 ARG N N N N 88 ARG CA C N S 89 ARG C C N N 90 ARG O O N N 91 ARG CB C N N 92 ARG CG C N N 93 ARG CD C N N 94 ARG NE N N N 95 ARG CZ C N N 96 ARG NH1 N N N 97 ARG NH2 N N N 98 ARG OXT O N N 99 ARG H H N N 100 ARG H2 H N N 101 ARG HA H N N 102 ARG HB2 H N N 103 ARG HB3 H N N 104 ARG HG2 H N N 105 ARG HG3 H N N 106 ARG HD2 H N N 107 ARG HD3 H N N 108 ARG HE H N N 109 ARG HH11 H N N 110 ARG HH12 H N N 111 ARG HH21 H N N 112 ARG HH22 H N N 113 ARG HXT H N N 114 ASN N N N N 115 ASN CA C N S 116 ASN C C N N 117 ASN O O N N 118 ASN CB C N N 119 ASN CG C N N 120 ASN OD1 O N N 121 ASN ND2 N N N 122 ASN OXT O N N 123 ASN H H N N 124 ASN H2 H N N 125 ASN HA H N N 126 ASN HB2 H N N 127 ASN HB3 H N N 128 ASN HD21 H N N 129 ASN HD22 H N N 130 ASN HXT H N N 131 ASP N N N N 132 ASP CA C N S 133 ASP C C N N 134 ASP O O N N 135 ASP CB C N N 136 ASP CG C N N 137 ASP OD1 O N N 138 ASP OD2 O N N 139 ASP OXT O N N 140 ASP H H N N 141 ASP H2 H N N 142 ASP HA H N N 143 ASP HB2 H N N 144 ASP HB3 H N N 145 ASP HD2 H N N 146 ASP HXT H N N 147 C OP3 O N N 148 C P P N N 149 C OP1 O N N 150 C OP2 O N N 151 C "O5'" O N N 152 C "C5'" C N N 153 C "C4'" C N R 154 C "O4'" O N N 155 C "C3'" C N S 156 C "O3'" O N N 157 C "C2'" C N R 158 C "O2'" O N N 159 C "C1'" C N R 160 C N1 N N N 161 C C2 C N N 162 C O2 O N N 163 C N3 N N N 164 C C4 C N N 165 C N4 N N N 166 C C5 C N N 167 C C6 C N N 168 C HOP3 H N N 169 C HOP2 H N N 170 C "H5'" H N N 171 C "H5''" H N N 172 C "H4'" H N N 173 C "H3'" H N N 174 C "HO3'" H N N 175 C "H2'" H N N 176 C "HO2'" H N N 177 C "H1'" H N N 178 C H41 H N N 179 C H42 H N N 180 C H5 H N N 181 C H6 H N N 182 CYS N N N N 183 CYS CA C N R 184 CYS C C N N 185 CYS O O N N 186 CYS CB C N N 187 CYS SG S N N 188 CYS OXT O N N 189 CYS H H N N 190 CYS H2 H N N 191 CYS HA H N N 192 CYS HB2 H N N 193 CYS HB3 H N N 194 CYS HG H N N 195 CYS HXT H N N 196 G OP3 O N N 197 G P P N N 198 G OP1 O N N 199 G OP2 O N N 200 G "O5'" O N N 201 G "C5'" C N N 202 G "C4'" C N R 203 G "O4'" O N N 204 G "C3'" C N S 205 G "O3'" O N N 206 G "C2'" C N R 207 G "O2'" O N N 208 G "C1'" C N R 209 G N9 N Y N 210 G C8 C Y N 211 G N7 N Y N 212 G C5 C Y N 213 G C6 C N N 214 G O6 O N N 215 G N1 N N N 216 G C2 C N N 217 G N2 N N N 218 G N3 N N N 219 G C4 C Y N 220 G HOP3 H N N 221 G HOP2 H N N 222 G "H5'" H N N 223 G "H5''" H N N 224 G "H4'" H N N 225 G "H3'" H N N 226 G "HO3'" H N N 227 G "H2'" H N N 228 G "HO2'" H N N 229 G "H1'" H N N 230 G H8 H N N 231 G H1 H N N 232 G H21 H N N 233 G H22 H N N 234 GLN N N N N 235 GLN CA C N S 236 GLN C C N N 237 GLN O O N N 238 GLN CB C N N 239 GLN CG C N N 240 GLN CD C N N 241 GLN OE1 O N N 242 GLN NE2 N N N 243 GLN OXT O N N 244 GLN H H N N 245 GLN H2 H N N 246 GLN HA H N N 247 GLN HB2 H N N 248 GLN HB3 H N N 249 GLN HG2 H N N 250 GLN HG3 H N N 251 GLN HE21 H N N 252 GLN HE22 H N N 253 GLN HXT H N N 254 GLU N N N N 255 GLU CA C N S 256 GLU C C N N 257 GLU O O N N 258 GLU CB C N N 259 GLU CG C N N 260 GLU CD C N N 261 GLU OE1 O N N 262 GLU OE2 O N N 263 GLU OXT O N N 264 GLU H H N N 265 GLU H2 H N N 266 GLU HA H N N 267 GLU HB2 H N N 268 GLU HB3 H N N 269 GLU HG2 H N N 270 GLU HG3 H N N 271 GLU HE2 H N N 272 GLU HXT H N N 273 GLY N N N N 274 GLY CA C N N 275 GLY C C N N 276 GLY O O N N 277 GLY OXT O N N 278 GLY H H N N 279 GLY H2 H N N 280 GLY HA2 H N N 281 GLY HA3 H N N 282 GLY HXT H N N 283 GTP PG P N N 284 GTP O1G O N N 285 GTP O2G O N N 286 GTP O3G O N N 287 GTP O3B O N N 288 GTP PB P N N 289 GTP O1B O N N 290 GTP O2B O N N 291 GTP O3A O N N 292 GTP PA P N N 293 GTP O1A O N N 294 GTP O2A O N N 295 GTP "O5'" O N N 296 GTP "C5'" C N N 297 GTP "C4'" C N R 298 GTP "O4'" O N N 299 GTP "C3'" C N S 300 GTP "O3'" O N N 301 GTP "C2'" C N R 302 GTP "O2'" O N N 303 GTP "C1'" C N R 304 GTP N9 N Y N 305 GTP C8 C Y N 306 GTP N7 N Y N 307 GTP C5 C Y N 308 GTP C6 C N N 309 GTP O6 O N N 310 GTP N1 N N N 311 GTP C2 C N N 312 GTP N2 N N N 313 GTP N3 N N N 314 GTP C4 C Y N 315 GTP HOG2 H N N 316 GTP HOG3 H N N 317 GTP HOB2 H N N 318 GTP HOA2 H N N 319 GTP "H5'" H N N 320 GTP "H5''" H N N 321 GTP "H4'" H N N 322 GTP "H3'" H N N 323 GTP "HO3'" H N N 324 GTP "H2'" H N N 325 GTP "HO2'" H N N 326 GTP "H1'" H N N 327 GTP H8 H N N 328 GTP HN1 H N N 329 GTP HN21 H N N 330 GTP HN22 H N N 331 HIS N N N N 332 HIS CA C N S 333 HIS C C N N 334 HIS O O N N 335 HIS CB C N N 336 HIS CG C Y N 337 HIS ND1 N Y N 338 HIS CD2 C Y N 339 HIS CE1 C Y N 340 HIS NE2 N Y N 341 HIS OXT O N N 342 HIS H H N N 343 HIS H2 H N N 344 HIS HA H N N 345 HIS HB2 H N N 346 HIS HB3 H N N 347 HIS HD1 H N N 348 HIS HD2 H N N 349 HIS HE1 H N N 350 HIS HE2 H N N 351 HIS HXT H N N 352 HOH O O N N 353 HOH H1 H N N 354 HOH H2 H N N 355 ILE N N N N 356 ILE CA C N S 357 ILE C C N N 358 ILE O O N N 359 ILE CB C N S 360 ILE CG1 C N N 361 ILE CG2 C N N 362 ILE CD1 C N N 363 ILE OXT O N N 364 ILE H H N N 365 ILE H2 H N N 366 ILE HA H N N 367 ILE HB H N N 368 ILE HG12 H N N 369 ILE HG13 H N N 370 ILE HG21 H N N 371 ILE HG22 H N N 372 ILE HG23 H N N 373 ILE HD11 H N N 374 ILE HD12 H N N 375 ILE HD13 H N N 376 ILE HXT H N N 377 LEU N N N N 378 LEU CA C N S 379 LEU C C N N 380 LEU O O N N 381 LEU CB C N N 382 LEU CG C N N 383 LEU CD1 C N N 384 LEU CD2 C N N 385 LEU OXT O N N 386 LEU H H N N 387 LEU H2 H N N 388 LEU HA H N N 389 LEU HB2 H N N 390 LEU HB3 H N N 391 LEU HG H N N 392 LEU HD11 H N N 393 LEU HD12 H N N 394 LEU HD13 H N N 395 LEU HD21 H N N 396 LEU HD22 H N N 397 LEU HD23 H N N 398 LEU HXT H N N 399 LYS N N N N 400 LYS CA C N S 401 LYS C C N N 402 LYS O O N N 403 LYS CB C N N 404 LYS CG C N N 405 LYS CD C N N 406 LYS CE C N N 407 LYS NZ N N N 408 LYS OXT O N N 409 LYS H H N N 410 LYS H2 H N N 411 LYS HA H N N 412 LYS HB2 H N N 413 LYS HB3 H N N 414 LYS HG2 H N N 415 LYS HG3 H N N 416 LYS HD2 H N N 417 LYS HD3 H N N 418 LYS HE2 H N N 419 LYS HE3 H N N 420 LYS HZ1 H N N 421 LYS HZ2 H N N 422 LYS HZ3 H N N 423 LYS HXT H N N 424 MET N N N N 425 MET CA C N S 426 MET C C N N 427 MET O O N N 428 MET CB C N N 429 MET CG C N N 430 MET SD S N N 431 MET CE C N N 432 MET OXT O N N 433 MET H H N N 434 MET H2 H N N 435 MET HA H N N 436 MET HB2 H N N 437 MET HB3 H N N 438 MET HG2 H N N 439 MET HG3 H N N 440 MET HE1 H N N 441 MET HE2 H N N 442 MET HE3 H N N 443 MET HXT H N N 444 PHE N N N N 445 PHE CA C N S 446 PHE C C N N 447 PHE O O N N 448 PHE CB C N N 449 PHE CG C Y N 450 PHE CD1 C Y N 451 PHE CD2 C Y N 452 PHE CE1 C Y N 453 PHE CE2 C Y N 454 PHE CZ C Y N 455 PHE OXT O N N 456 PHE H H N N 457 PHE H2 H N N 458 PHE HA H N N 459 PHE HB2 H N N 460 PHE HB3 H N N 461 PHE HD1 H N N 462 PHE HD2 H N N 463 PHE HE1 H N N 464 PHE HE2 H N N 465 PHE HZ H N N 466 PHE HXT H N N 467 PRO N N N N 468 PRO CA C N S 469 PRO C C N N 470 PRO O O N N 471 PRO CB C N N 472 PRO CG C N N 473 PRO CD C N N 474 PRO OXT O N N 475 PRO H H N N 476 PRO HA H N N 477 PRO HB2 H N N 478 PRO HB3 H N N 479 PRO HG2 H N N 480 PRO HG3 H N N 481 PRO HD2 H N N 482 PRO HD3 H N N 483 PRO HXT H N N 484 SER N N N N 485 SER CA C N S 486 SER C C N N 487 SER O O N N 488 SER CB C N N 489 SER OG O N N 490 SER OXT O N N 491 SER H H N N 492 SER H2 H N N 493 SER HA H N N 494 SER HB2 H N N 495 SER HB3 H N N 496 SER HG H N N 497 SER HXT H N N 498 THR N N N N 499 THR CA C N S 500 THR C C N N 501 THR O O N N 502 THR CB C N R 503 THR OG1 O N N 504 THR CG2 C N N 505 THR OXT O N N 506 THR H H N N 507 THR H2 H N N 508 THR HA H N N 509 THR HB H N N 510 THR HG1 H N N 511 THR HG21 H N N 512 THR HG22 H N N 513 THR HG23 H N N 514 THR HXT H N N 515 TRP N N N N 516 TRP CA C N S 517 TRP C C N N 518 TRP O O N N 519 TRP CB C N N 520 TRP CG C Y N 521 TRP CD1 C Y N 522 TRP CD2 C Y N 523 TRP NE1 N Y N 524 TRP CE2 C Y N 525 TRP CE3 C Y N 526 TRP CZ2 C Y N 527 TRP CZ3 C Y N 528 TRP CH2 C Y N 529 TRP OXT O N N 530 TRP H H N N 531 TRP H2 H N N 532 TRP HA H N N 533 TRP HB2 H N N 534 TRP HB3 H N N 535 TRP HD1 H N N 536 TRP HE1 H N N 537 TRP HE3 H N N 538 TRP HZ2 H N N 539 TRP HZ3 H N N 540 TRP HH2 H N N 541 TRP HXT H N N 542 TYR N N N N 543 TYR CA C N S 544 TYR C C N N 545 TYR O O N N 546 TYR CB C N N 547 TYR CG C Y N 548 TYR CD1 C Y N 549 TYR CD2 C Y N 550 TYR CE1 C Y N 551 TYR CE2 C Y N 552 TYR CZ C Y N 553 TYR OH O N N 554 TYR OXT O N N 555 TYR H H N N 556 TYR H2 H N N 557 TYR HA H N N 558 TYR HB2 H N N 559 TYR HB3 H N N 560 TYR HD1 H N N 561 TYR HD2 H N N 562 TYR HE1 H N N 563 TYR HE2 H N N 564 TYR HH H N N 565 TYR HXT H N N 566 U OP3 O N N 567 U P P N N 568 U OP1 O N N 569 U OP2 O N N 570 U "O5'" O N N 571 U "C5'" C N N 572 U "C4'" C N R 573 U "O4'" O N N 574 U "C3'" C N S 575 U "O3'" O N N 576 U "C2'" C N R 577 U "O2'" O N N 578 U "C1'" C N R 579 U N1 N N N 580 U C2 C N N 581 U O2 O N N 582 U N3 N N N 583 U C4 C N N 584 U O4 O N N 585 U C5 C N N 586 U C6 C N N 587 U HOP3 H N N 588 U HOP2 H N N 589 U "H5'" H N N 590 U "H5''" H N N 591 U "H4'" H N N 592 U "H3'" H N N 593 U "HO3'" H N N 594 U "H2'" H N N 595 U "HO2'" H N N 596 U "H1'" H N N 597 U H3 H N N 598 U H5 H N N 599 U H6 H N N 600 VAL N N N N 601 VAL CA C N S 602 VAL C C N N 603 VAL O O N N 604 VAL CB C N N 605 VAL CG1 C N N 606 VAL CG2 C N N 607 VAL OXT O N N 608 VAL H H N N 609 VAL H2 H N N 610 VAL HA H N N 611 VAL HB H N N 612 VAL HG11 H N N 613 VAL HG12 H N N 614 VAL HG13 H N N 615 VAL HG21 H N N 616 VAL HG22 H N N 617 VAL HG23 H N N 618 VAL HXT H N N 619 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 AMP P O1P doub N N 52 AMP P O2P sing N N 53 AMP P O3P sing N N 54 AMP P "O5'" sing N N 55 AMP O2P HOP2 sing N N 56 AMP O3P HOP3 sing N N 57 AMP "O5'" "C5'" sing N N 58 AMP "C5'" "C4'" sing N N 59 AMP "C5'" "H5'1" sing N N 60 AMP "C5'" "H5'2" sing N N 61 AMP "C4'" "O4'" sing N N 62 AMP "C4'" "C3'" sing N N 63 AMP "C4'" "H4'" sing N N 64 AMP "O4'" "C1'" sing N N 65 AMP "C3'" "O3'" sing N N 66 AMP "C3'" "C2'" sing N N 67 AMP "C3'" "H3'" sing N N 68 AMP "O3'" "HO3'" sing N N 69 AMP "C2'" "O2'" sing N N 70 AMP "C2'" "C1'" sing N N 71 AMP "C2'" "H2'" sing N N 72 AMP "O2'" "HO2'" sing N N 73 AMP "C1'" N9 sing N N 74 AMP "C1'" "H1'" sing N N 75 AMP N9 C8 sing Y N 76 AMP N9 C4 sing Y N 77 AMP C8 N7 doub Y N 78 AMP C8 H8 sing N N 79 AMP N7 C5 sing Y N 80 AMP C5 C6 sing Y N 81 AMP C5 C4 doub Y N 82 AMP C6 N6 sing N N 83 AMP C6 N1 doub Y N 84 AMP N6 HN61 sing N N 85 AMP N6 HN62 sing N N 86 AMP N1 C2 sing Y N 87 AMP C2 N3 doub Y N 88 AMP C2 H2 sing N N 89 AMP N3 C4 sing Y N 90 ARG N CA sing N N 91 ARG N H sing N N 92 ARG N H2 sing N N 93 ARG CA C sing N N 94 ARG CA CB sing N N 95 ARG CA HA sing N N 96 ARG C O doub N N 97 ARG C OXT sing N N 98 ARG CB CG sing N N 99 ARG CB HB2 sing N N 100 ARG CB HB3 sing N N 101 ARG CG CD sing N N 102 ARG CG HG2 sing N N 103 ARG CG HG3 sing N N 104 ARG CD NE sing N N 105 ARG CD HD2 sing N N 106 ARG CD HD3 sing N N 107 ARG NE CZ sing N N 108 ARG NE HE sing N N 109 ARG CZ NH1 sing N N 110 ARG CZ NH2 doub N N 111 ARG NH1 HH11 sing N N 112 ARG NH1 HH12 sing N N 113 ARG NH2 HH21 sing N N 114 ARG NH2 HH22 sing N N 115 ARG OXT HXT sing N N 116 ASN N CA sing N N 117 ASN N H sing N N 118 ASN N H2 sing N N 119 ASN CA C sing N N 120 ASN CA CB sing N N 121 ASN CA HA sing N N 122 ASN C O doub N N 123 ASN C OXT sing N N 124 ASN CB CG sing N N 125 ASN CB HB2 sing N N 126 ASN CB HB3 sing N N 127 ASN CG OD1 doub N N 128 ASN CG ND2 sing N N 129 ASN ND2 HD21 sing N N 130 ASN ND2 HD22 sing N N 131 ASN OXT HXT sing N N 132 ASP N CA sing N N 133 ASP N H sing N N 134 ASP N H2 sing N N 135 ASP CA C sing N N 136 ASP CA CB sing N N 137 ASP CA HA sing N N 138 ASP C O doub N N 139 ASP C OXT sing N N 140 ASP CB CG sing N N 141 ASP CB HB2 sing N N 142 ASP CB HB3 sing N N 143 ASP CG OD1 doub N N 144 ASP CG OD2 sing N N 145 ASP OD2 HD2 sing N N 146 ASP OXT HXT sing N N 147 C OP3 P sing N N 148 C OP3 HOP3 sing N N 149 C P OP1 doub N N 150 C P OP2 sing N N 151 C P "O5'" sing N N 152 C OP2 HOP2 sing N N 153 C "O5'" "C5'" sing N N 154 C "C5'" "C4'" sing N N 155 C "C5'" "H5'" sing N N 156 C "C5'" "H5''" sing N N 157 C "C4'" "O4'" sing N N 158 C "C4'" "C3'" sing N N 159 C "C4'" "H4'" sing N N 160 C "O4'" "C1'" sing N N 161 C "C3'" "O3'" sing N N 162 C "C3'" "C2'" sing N N 163 C "C3'" "H3'" sing N N 164 C "O3'" "HO3'" sing N N 165 C "C2'" "O2'" sing N N 166 C "C2'" "C1'" sing N N 167 C "C2'" "H2'" sing N N 168 C "O2'" "HO2'" sing N N 169 C "C1'" N1 sing N N 170 C "C1'" "H1'" sing N N 171 C N1 C2 sing N N 172 C N1 C6 sing N N 173 C C2 O2 doub N N 174 C C2 N3 sing N N 175 C N3 C4 doub N N 176 C C4 N4 sing N N 177 C C4 C5 sing N N 178 C N4 H41 sing N N 179 C N4 H42 sing N N 180 C C5 C6 doub N N 181 C C5 H5 sing N N 182 C C6 H6 sing N N 183 CYS N CA sing N N 184 CYS N H sing N N 185 CYS N H2 sing N N 186 CYS CA C sing N N 187 CYS CA CB sing N N 188 CYS CA HA sing N N 189 CYS C O doub N N 190 CYS C OXT sing N N 191 CYS CB SG sing N N 192 CYS CB HB2 sing N N 193 CYS CB HB3 sing N N 194 CYS SG HG sing N N 195 CYS OXT HXT sing N N 196 G OP3 P sing N N 197 G OP3 HOP3 sing N N 198 G P OP1 doub N N 199 G P OP2 sing N N 200 G P "O5'" sing N N 201 G OP2 HOP2 sing N N 202 G "O5'" "C5'" sing N N 203 G "C5'" "C4'" sing N N 204 G "C5'" "H5'" sing N N 205 G "C5'" "H5''" sing N N 206 G "C4'" "O4'" sing N N 207 G "C4'" "C3'" sing N N 208 G "C4'" "H4'" sing N N 209 G "O4'" "C1'" sing N N 210 G "C3'" "O3'" sing N N 211 G "C3'" "C2'" sing N N 212 G "C3'" "H3'" sing N N 213 G "O3'" "HO3'" sing N N 214 G "C2'" "O2'" sing N N 215 G "C2'" "C1'" sing N N 216 G "C2'" "H2'" sing N N 217 G "O2'" "HO2'" sing N N 218 G "C1'" N9 sing N N 219 G "C1'" "H1'" sing N N 220 G N9 C8 sing Y N 221 G N9 C4 sing Y N 222 G C8 N7 doub Y N 223 G C8 H8 sing N N 224 G N7 C5 sing Y N 225 G C5 C6 sing N N 226 G C5 C4 doub Y N 227 G C6 O6 doub N N 228 G C6 N1 sing N N 229 G N1 C2 sing N N 230 G N1 H1 sing N N 231 G C2 N2 sing N N 232 G C2 N3 doub N N 233 G N2 H21 sing N N 234 G N2 H22 sing N N 235 G N3 C4 sing N N 236 GLN N CA sing N N 237 GLN N H sing N N 238 GLN N H2 sing N N 239 GLN CA C sing N N 240 GLN CA CB sing N N 241 GLN CA HA sing N N 242 GLN C O doub N N 243 GLN C OXT sing N N 244 GLN CB CG sing N N 245 GLN CB HB2 sing N N 246 GLN CB HB3 sing N N 247 GLN CG CD sing N N 248 GLN CG HG2 sing N N 249 GLN CG HG3 sing N N 250 GLN CD OE1 doub N N 251 GLN CD NE2 sing N N 252 GLN NE2 HE21 sing N N 253 GLN NE2 HE22 sing N N 254 GLN OXT HXT sing N N 255 GLU N CA sing N N 256 GLU N H sing N N 257 GLU N H2 sing N N 258 GLU CA C sing N N 259 GLU CA CB sing N N 260 GLU CA HA sing N N 261 GLU C O doub N N 262 GLU C OXT sing N N 263 GLU CB CG sing N N 264 GLU CB HB2 sing N N 265 GLU CB HB3 sing N N 266 GLU CG CD sing N N 267 GLU CG HG2 sing N N 268 GLU CG HG3 sing N N 269 GLU CD OE1 doub N N 270 GLU CD OE2 sing N N 271 GLU OE2 HE2 sing N N 272 GLU OXT HXT sing N N 273 GLY N CA sing N N 274 GLY N H sing N N 275 GLY N H2 sing N N 276 GLY CA C sing N N 277 GLY CA HA2 sing N N 278 GLY CA HA3 sing N N 279 GLY C O doub N N 280 GLY C OXT sing N N 281 GLY OXT HXT sing N N 282 GTP PG O1G doub N N 283 GTP PG O2G sing N N 284 GTP PG O3G sing N N 285 GTP PG O3B sing N N 286 GTP O2G HOG2 sing N N 287 GTP O3G HOG3 sing N N 288 GTP O3B PB sing N N 289 GTP PB O1B doub N N 290 GTP PB O2B sing N N 291 GTP PB O3A sing N N 292 GTP O2B HOB2 sing N N 293 GTP O3A PA sing N N 294 GTP PA O1A doub N N 295 GTP PA O2A sing N N 296 GTP PA "O5'" sing N N 297 GTP O2A HOA2 sing N N 298 GTP "O5'" "C5'" sing N N 299 GTP "C5'" "C4'" sing N N 300 GTP "C5'" "H5'" sing N N 301 GTP "C5'" "H5''" sing N N 302 GTP "C4'" "O4'" sing N N 303 GTP "C4'" "C3'" sing N N 304 GTP "C4'" "H4'" sing N N 305 GTP "O4'" "C1'" sing N N 306 GTP "C3'" "O3'" sing N N 307 GTP "C3'" "C2'" sing N N 308 GTP "C3'" "H3'" sing N N 309 GTP "O3'" "HO3'" sing N N 310 GTP "C2'" "O2'" sing N N 311 GTP "C2'" "C1'" sing N N 312 GTP "C2'" "H2'" sing N N 313 GTP "O2'" "HO2'" sing N N 314 GTP "C1'" N9 sing N N 315 GTP "C1'" "H1'" sing N N 316 GTP N9 C8 sing Y N 317 GTP N9 C4 sing Y N 318 GTP C8 N7 doub Y N 319 GTP C8 H8 sing N N 320 GTP N7 C5 sing Y N 321 GTP C5 C6 sing N N 322 GTP C5 C4 doub Y N 323 GTP C6 O6 doub N N 324 GTP C6 N1 sing N N 325 GTP N1 C2 sing N N 326 GTP N1 HN1 sing N N 327 GTP C2 N2 sing N N 328 GTP C2 N3 doub N N 329 GTP N2 HN21 sing N N 330 GTP N2 HN22 sing N N 331 GTP N3 C4 sing N N 332 HIS N CA sing N N 333 HIS N H sing N N 334 HIS N H2 sing N N 335 HIS CA C sing N N 336 HIS CA CB sing N N 337 HIS CA HA sing N N 338 HIS C O doub N N 339 HIS C OXT sing N N 340 HIS CB CG sing N N 341 HIS CB HB2 sing N N 342 HIS CB HB3 sing N N 343 HIS CG ND1 sing Y N 344 HIS CG CD2 doub Y N 345 HIS ND1 CE1 doub Y N 346 HIS ND1 HD1 sing N N 347 HIS CD2 NE2 sing Y N 348 HIS CD2 HD2 sing N N 349 HIS CE1 NE2 sing Y N 350 HIS CE1 HE1 sing N N 351 HIS NE2 HE2 sing N N 352 HIS OXT HXT sing N N 353 HOH O H1 sing N N 354 HOH O H2 sing N N 355 ILE N CA sing N N 356 ILE N H sing N N 357 ILE N H2 sing N N 358 ILE CA C sing N N 359 ILE CA CB sing N N 360 ILE CA HA sing N N 361 ILE C O doub N N 362 ILE C OXT sing N N 363 ILE CB CG1 sing N N 364 ILE CB CG2 sing N N 365 ILE CB HB sing N N 366 ILE CG1 CD1 sing N N 367 ILE CG1 HG12 sing N N 368 ILE CG1 HG13 sing N N 369 ILE CG2 HG21 sing N N 370 ILE CG2 HG22 sing N N 371 ILE CG2 HG23 sing N N 372 ILE CD1 HD11 sing N N 373 ILE CD1 HD12 sing N N 374 ILE CD1 HD13 sing N N 375 ILE OXT HXT sing N N 376 LEU N CA sing N N 377 LEU N H sing N N 378 LEU N H2 sing N N 379 LEU CA C sing N N 380 LEU CA CB sing N N 381 LEU CA HA sing N N 382 LEU C O doub N N 383 LEU C OXT sing N N 384 LEU CB CG sing N N 385 LEU CB HB2 sing N N 386 LEU CB HB3 sing N N 387 LEU CG CD1 sing N N 388 LEU CG CD2 sing N N 389 LEU CG HG sing N N 390 LEU CD1 HD11 sing N N 391 LEU CD1 HD12 sing N N 392 LEU CD1 HD13 sing N N 393 LEU CD2 HD21 sing N N 394 LEU CD2 HD22 sing N N 395 LEU CD2 HD23 sing N N 396 LEU OXT HXT sing N N 397 LYS N CA sing N N 398 LYS N H sing N N 399 LYS N H2 sing N N 400 LYS CA C sing N N 401 LYS CA CB sing N N 402 LYS CA HA sing N N 403 LYS C O doub N N 404 LYS C OXT sing N N 405 LYS CB CG sing N N 406 LYS CB HB2 sing N N 407 LYS CB HB3 sing N N 408 LYS CG CD sing N N 409 LYS CG HG2 sing N N 410 LYS CG HG3 sing N N 411 LYS CD CE sing N N 412 LYS CD HD2 sing N N 413 LYS CD HD3 sing N N 414 LYS CE NZ sing N N 415 LYS CE HE2 sing N N 416 LYS CE HE3 sing N N 417 LYS NZ HZ1 sing N N 418 LYS NZ HZ2 sing N N 419 LYS NZ HZ3 sing N N 420 LYS OXT HXT sing N N 421 MET N CA sing N N 422 MET N H sing N N 423 MET N H2 sing N N 424 MET CA C sing N N 425 MET CA CB sing N N 426 MET CA HA sing N N 427 MET C O doub N N 428 MET C OXT sing N N 429 MET CB CG sing N N 430 MET CB HB2 sing N N 431 MET CB HB3 sing N N 432 MET CG SD sing N N 433 MET CG HG2 sing N N 434 MET CG HG3 sing N N 435 MET SD CE sing N N 436 MET CE HE1 sing N N 437 MET CE HE2 sing N N 438 MET CE HE3 sing N N 439 MET OXT HXT sing N N 440 PHE N CA sing N N 441 PHE N H sing N N 442 PHE N H2 sing N N 443 PHE CA C sing N N 444 PHE CA CB sing N N 445 PHE CA HA sing N N 446 PHE C O doub N N 447 PHE C OXT sing N N 448 PHE CB CG sing N N 449 PHE CB HB2 sing N N 450 PHE CB HB3 sing N N 451 PHE CG CD1 doub Y N 452 PHE CG CD2 sing Y N 453 PHE CD1 CE1 sing Y N 454 PHE CD1 HD1 sing N N 455 PHE CD2 CE2 doub Y N 456 PHE CD2 HD2 sing N N 457 PHE CE1 CZ doub Y N 458 PHE CE1 HE1 sing N N 459 PHE CE2 CZ sing Y N 460 PHE CE2 HE2 sing N N 461 PHE CZ HZ sing N N 462 PHE OXT HXT sing N N 463 PRO N CA sing N N 464 PRO N CD sing N N 465 PRO N H sing N N 466 PRO CA C sing N N 467 PRO CA CB sing N N 468 PRO CA HA sing N N 469 PRO C O doub N N 470 PRO C OXT sing N N 471 PRO CB CG sing N N 472 PRO CB HB2 sing N N 473 PRO CB HB3 sing N N 474 PRO CG CD sing N N 475 PRO CG HG2 sing N N 476 PRO CG HG3 sing N N 477 PRO CD HD2 sing N N 478 PRO CD HD3 sing N N 479 PRO OXT HXT sing N N 480 SER N CA sing N N 481 SER N H sing N N 482 SER N H2 sing N N 483 SER CA C sing N N 484 SER CA CB sing N N 485 SER CA HA sing N N 486 SER C O doub N N 487 SER C OXT sing N N 488 SER CB OG sing N N 489 SER CB HB2 sing N N 490 SER CB HB3 sing N N 491 SER OG HG sing N N 492 SER OXT HXT sing N N 493 THR N CA sing N N 494 THR N H sing N N 495 THR N H2 sing N N 496 THR CA C sing N N 497 THR CA CB sing N N 498 THR CA HA sing N N 499 THR C O doub N N 500 THR C OXT sing N N 501 THR CB OG1 sing N N 502 THR CB CG2 sing N N 503 THR CB HB sing N N 504 THR OG1 HG1 sing N N 505 THR CG2 HG21 sing N N 506 THR CG2 HG22 sing N N 507 THR CG2 HG23 sing N N 508 THR OXT HXT sing N N 509 TRP N CA sing N N 510 TRP N H sing N N 511 TRP N H2 sing N N 512 TRP CA C sing N N 513 TRP CA CB sing N N 514 TRP CA HA sing N N 515 TRP C O doub N N 516 TRP C OXT sing N N 517 TRP CB CG sing N N 518 TRP CB HB2 sing N N 519 TRP CB HB3 sing N N 520 TRP CG CD1 doub Y N 521 TRP CG CD2 sing Y N 522 TRP CD1 NE1 sing Y N 523 TRP CD1 HD1 sing N N 524 TRP CD2 CE2 doub Y N 525 TRP CD2 CE3 sing Y N 526 TRP NE1 CE2 sing Y N 527 TRP NE1 HE1 sing N N 528 TRP CE2 CZ2 sing Y N 529 TRP CE3 CZ3 doub Y N 530 TRP CE3 HE3 sing N N 531 TRP CZ2 CH2 doub Y N 532 TRP CZ2 HZ2 sing N N 533 TRP CZ3 CH2 sing Y N 534 TRP CZ3 HZ3 sing N N 535 TRP CH2 HH2 sing N N 536 TRP OXT HXT sing N N 537 TYR N CA sing N N 538 TYR N H sing N N 539 TYR N H2 sing N N 540 TYR CA C sing N N 541 TYR CA CB sing N N 542 TYR CA HA sing N N 543 TYR C O doub N N 544 TYR C OXT sing N N 545 TYR CB CG sing N N 546 TYR CB HB2 sing N N 547 TYR CB HB3 sing N N 548 TYR CG CD1 doub Y N 549 TYR CG CD2 sing Y N 550 TYR CD1 CE1 sing Y N 551 TYR CD1 HD1 sing N N 552 TYR CD2 CE2 doub Y N 553 TYR CD2 HD2 sing N N 554 TYR CE1 CZ doub Y N 555 TYR CE1 HE1 sing N N 556 TYR CE2 CZ sing Y N 557 TYR CE2 HE2 sing N N 558 TYR CZ OH sing N N 559 TYR OH HH sing N N 560 TYR OXT HXT sing N N 561 U OP3 P sing N N 562 U OP3 HOP3 sing N N 563 U P OP1 doub N N 564 U P OP2 sing N N 565 U P "O5'" sing N N 566 U OP2 HOP2 sing N N 567 U "O5'" "C5'" sing N N 568 U "C5'" "C4'" sing N N 569 U "C5'" "H5'" sing N N 570 U "C5'" "H5''" sing N N 571 U "C4'" "O4'" sing N N 572 U "C4'" "C3'" sing N N 573 U "C4'" "H4'" sing N N 574 U "O4'" "C1'" sing N N 575 U "C3'" "O3'" sing N N 576 U "C3'" "C2'" sing N N 577 U "C3'" "H3'" sing N N 578 U "O3'" "HO3'" sing N N 579 U "C2'" "O2'" sing N N 580 U "C2'" "C1'" sing N N 581 U "C2'" "H2'" sing N N 582 U "O2'" "HO2'" sing N N 583 U "C1'" N1 sing N N 584 U "C1'" "H1'" sing N N 585 U N1 C2 sing N N 586 U N1 C6 sing N N 587 U C2 O2 doub N N 588 U C2 N3 sing N N 589 U N3 C4 sing N N 590 U N3 H3 sing N N 591 U C4 O4 doub N N 592 U C4 C5 sing N N 593 U C5 C6 doub N N 594 U C5 H5 sing N N 595 U C6 H6 sing N N 596 VAL N CA sing N N 597 VAL N H sing N N 598 VAL N H2 sing N N 599 VAL CA C sing N N 600 VAL CA CB sing N N 601 VAL CA HA sing N N 602 VAL C O doub N N 603 VAL C OXT sing N N 604 VAL CB CG1 sing N N 605 VAL CB CG2 sing N N 606 VAL CB HB sing N N 607 VAL CG1 HG11 sing N N 608 VAL CG1 HG12 sing N N 609 VAL CG1 HG13 sing N N 610 VAL CG2 HG21 sing N N 611 VAL CG2 HG22 sing N N 612 VAL CG2 HG23 sing N N 613 VAL OXT HXT sing N N 614 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4RDX 'double helix' 4RDX 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B GTP 1 1_555 B C 75 1_555 -0.529 -0.202 0.339 7.893 3.145 -1.372 1 C_GTP-1:C73_C C -1 ? C 73 ? 19 1 1 B G 2 1_555 B C 74 1_555 -0.309 -0.240 -0.339 -0.683 -16.726 2.801 2 C_G1:C72_C C 1 ? C 72 ? 19 1 1 B U 3 1_555 B A 73 1_555 -0.497 -0.122 0.183 -9.219 -8.947 0.077 3 C_U2:A71_C C 2 ? C 71 ? 20 1 1 B G 4 1_555 B C 72 1_555 0.098 -0.119 0.179 -5.598 -12.639 3.435 4 C_G3:C70_C C 3 ? C 70 ? 19 1 1 B A 5 1_555 B U 71 1_555 0.148 -0.076 0.280 6.884 -13.797 5.374 5 C_A4:U69_C C 4 ? C 69 ? 20 1 1 B G 6 1_555 B C 70 1_555 0.074 -0.078 0.067 2.932 -16.015 -1.969 6 C_G5:C68_C C 5 ? C 68 ? 19 1 1 B C 7 1_555 B G 69 1_555 -0.112 -0.315 0.220 -3.483 -17.848 -4.004 7 C_C6:G67_C C 6 ? C 67 ? 19 1 1 B G 8 1_555 B C 68 1_555 -0.155 -0.250 -0.146 -3.342 -4.754 -0.571 8 C_G7:C66_C C 7 ? C 66 ? 19 1 1 B G 51 1_555 B U 67 1_555 -1.707 -0.390 0.100 -7.324 -15.161 1.122 9 C_G49:U65_C C 49 ? C 65 ? 28 1 1 B U 52 1_555 B A 66 1_555 -0.153 -0.180 0.545 -12.815 -15.374 4.885 10 C_U50:A64_C C 50 ? C 64 ? 20 1 1 B G 53 1_555 B C 65 1_555 -0.635 -0.204 0.240 -2.616 -9.112 3.431 11 C_G51:C63_C C 51 ? C 63 ? 19 1 1 B G 54 1_555 B C 64 1_555 -0.010 -0.267 -0.041 -1.058 -10.351 -1.996 12 C_G52:C62_C C 52 ? C 62 ? 19 1 1 B G 55 1_555 B C 63 1_555 0.039 -0.097 -0.156 -14.933 -10.628 1.368 13 C_G53:C61_C C 53 ? C 61 ? 19 1 1 B U 56 1_555 B A 60 1_555 4.233 -2.356 -0.039 -6.651 10.210 -95.871 14 C_U54:A58_C C 54 ? C 58 ? 24 4 1 B U 57 1_555 B G 19 1_555 0.654 -5.855 -0.187 25.728 4.737 -100.200 15 C_U55:G18_C C 55 ? C 18 ? ? 2 1 B G 11 1_555 B C 27 1_555 -0.517 -0.216 -0.984 -7.050 -13.955 0.236 16 C_G10:C25_C C 10 ? C 25 ? 19 1 1 B C 12 1_555 B G 26 1_555 0.821 -0.451 -0.183 -6.666 -11.563 3.123 17 C_C11:G24_C C 11 ? C 24 ? 19 1 1 B U 13 1_555 B A 25 1_555 -0.725 -0.085 0.320 -10.251 5.860 3.963 18 C_U12:A23_C C 12 ? C 23 ? 20 1 1 B C 14 1_555 B G 24 1_555 0.505 -0.041 0.135 11.098 -8.650 4.046 19 C_C13:G22_C C 13 ? C 22 ? 19 1 1 B A 15 1_555 B U 9 1_555 -4.291 -1.799 0.837 7.167 25.792 -101.616 20 C_A14:U8_C C 14 ? C 8 ? 24 4 1 B G 16 1_555 B C 50 1_555 -0.193 3.702 0.260 -1.575 8.574 159.247 21 C_G15:C48_C C 15 ? C 48 ? 22 2 1 B G 20 1_555 B C 58 1_555 0.494 -0.108 0.282 -22.442 -18.516 -0.015 22 C_G19:C56_C C 19 ? C 56 ? 19 1 1 B C 29 1_555 B G 45 1_555 -0.481 0.809 0.079 22.512 -34.878 10.920 23 C_C27:G43_C C 27 ? C 43 ? ? 1 1 B C 30 1_555 B G 44 1_555 1.445 -0.049 0.029 3.373 -25.354 4.275 24 C_C28:G42_C C 28 ? C 42 ? 19 1 1 B G 31 1_555 B C 43 1_555 0.307 -0.164 0.583 -3.532 -19.641 -4.381 25 C_G29:C41_C C 29 ? C 41 ? 19 1 1 B G 32 1_555 B C 42 1_555 -0.225 -0.330 -0.207 -3.627 -26.156 -12.351 26 C_G30:C40_C C 30 ? C 40 ? 19 1 1 B A 33 1_555 B U 41 1_555 -4.607 -0.843 0.507 -19.275 19.573 -106.427 27 C_A31:U39_C C 31 ? C 39 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B GTP 1 1_555 B C 75 1_555 B G 2 1_555 B C 74 1_555 -0.473 -1.775 3.533 2.273 5.171 35.414 -3.654 1.107 3.215 8.435 -3.707 35.847 1 CC_GTP-1G1:C72C73_CC C -1 ? C 73 ? C 1 ? C 72 ? 1 B G 2 1_555 B C 74 1_555 B U 3 1_555 B A 73 1_555 -0.059 -1.878 3.537 -3.478 9.511 30.177 -5.166 -0.529 2.819 17.655 6.456 31.793 2 CC_G1U2:A71C72_CC C 1 ? C 72 ? C 2 ? C 71 ? 1 B U 3 1_555 B A 73 1_555 B G 4 1_555 B C 72 1_555 0.489 -1.819 2.964 1.900 11.293 31.449 -4.692 -0.592 2.222 20.022 -3.369 33.420 3 CC_U2G3:C70A71_CC C 2 ? C 71 ? C 3 ? C 70 ? 1 B G 4 1_555 B C 72 1_555 B A 5 1_555 B U 71 1_555 -0.003 -1.048 2.871 -0.925 6.133 30.706 -2.923 -0.142 2.616 11.436 1.726 31.312 4 CC_G3A4:U69C70_CC C 3 ? C 70 ? C 4 ? C 69 ? 1 B A 5 1_555 B U 71 1_555 B G 6 1_555 B C 70 1_555 -0.466 -1.587 3.340 1.275 7.267 30.815 -4.201 1.081 2.879 13.436 -2.358 31.665 5 CC_A4G5:C68U69_CC C 4 ? C 69 ? C 5 ? C 68 ? 1 B G 6 1_555 B C 70 1_555 B C 7 1_555 B G 69 1_555 0.349 -1.735 3.380 1.052 2.251 33.464 -3.381 -0.429 3.268 3.902 -1.824 33.554 6 CC_G5C6:G67C68_CC C 5 ? C 68 ? C 6 ? C 67 ? 1 B C 7 1_555 B G 69 1_555 B G 8 1_555 B C 68 1_555 0.105 -1.835 3.114 4.137 13.806 31.948 -4.814 0.354 2.158 23.638 -7.084 34.971 7 CC_C6G7:C66G67_CC C 6 ? C 67 ? C 7 ? C 66 ? 1 B G 8 1_555 B C 68 1_555 B G 51 1_555 B U 67 1_555 -0.272 -1.636 3.189 -3.212 5.131 30.935 -3.912 -0.062 2.899 9.506 5.949 31.507 8 CC_G7G49:U65C66_CC C 7 ? C 66 ? C 49 ? C 65 ? 1 B G 51 1_555 B U 67 1_555 B U 52 1_555 B A 66 1_555 -0.103 -1.450 3.347 -2.487 2.333 41.169 -2.309 -0.124 3.265 3.310 3.529 41.303 9 CC_G49U50:A64U65_CC C 49 ? C 65 ? C 50 ? C 64 ? 1 B U 52 1_555 B A 66 1_555 B G 53 1_555 B C 65 1_555 -0.252 -1.459 2.873 0.070 4.304 29.260 -3.631 0.507 2.635 8.462 -0.139 29.568 10 CC_U50G51:C63A64_CC C 50 ? C 64 ? C 51 ? C 63 ? 1 B G 53 1_555 B C 65 1_555 B G 54 1_555 B C 64 1_555 0.139 -1.728 3.214 1.988 4.571 30.542 -4.077 0.102 2.934 8.605 -3.743 30.937 11 CC_G51G52:C62C63_CC C 51 ? C 63 ? C 52 ? C 62 ? 1 B G 54 1_555 B C 64 1_555 B G 55 1_555 B C 63 1_555 0.708 -1.957 3.519 3.708 3.132 36.701 -3.530 -0.586 3.399 4.948 -5.857 37.009 12 CC_G52G53:C61C62_CC C 52 ? C 62 ? C 53 ? C 61 ? 1 B G 55 1_555 B C 63 1_555 B U 56 1_555 B A 60 1_555 -2.018 -2.214 3.170 6.197 1.313 83.739 -1.685 1.648 3.014 0.982 -4.636 83.934 13 CC_G53U54:A58C61_CC C 53 ? C 61 ? C 54 ? C 58 ? 1 B U 56 1_555 B A 60 1_555 B U 57 1_555 B G 19 1_555 1.956 -1.738 3.044 13.103 1.427 41.153 -2.507 -1.353 3.424 1.970 -18.090 43.125 14 CC_U54U55:G18A58_CC C 54 ? C 58 ? C 55 ? C 18 ? 1 B G 11 1_555 B C 27 1_555 B C 12 1_555 B G 26 1_555 -0.807 -1.450 3.225 -6.868 6.407 39.606 -2.779 0.419 3.056 9.298 9.967 40.661 15 CC_G10C11:G24C25_CC C 10 ? C 25 ? C 11 ? C 24 ? 1 B C 12 1_555 B G 26 1_555 B U 13 1_555 B A 25 1_555 -0.204 -1.733 3.564 -5.868 6.038 26.853 -5.041 -1.013 3.083 12.615 12.258 28.119 16 CC_C11U12:A23G24_CC C 11 ? C 24 ? C 12 ? C 23 ? 1 B U 13 1_555 B A 25 1_555 B C 14 1_555 B G 24 1_555 1.571 -2.105 2.815 6.393 5.775 30.147 -4.826 -1.884 2.646 10.828 -11.986 31.326 17 CC_U12C13:G22A23_CC C 12 ? C 23 ? C 13 ? C 22 ? 1 B C 14 1_555 B G 24 1_555 B A 15 1_555 B U 9 1_555 -2.338 -0.044 3.433 1.419 -0.839 57.166 0.002 2.523 3.379 -0.876 -1.482 57.188 18 CC_C13A14:U8G22_CC C 13 ? C 22 ? C 14 ? C 8 ? 1 B A 15 1_555 B U 9 1_555 B G 16 1_555 B C 50 1_555 2.303 -3.379 3.211 -0.027 8.127 -65.849 2.752 2.105 3.560 -7.446 -0.025 -66.293 19 CC_A14G15:C48U8_CC C 14 ? C 8 ? C 15 ? C 48 ? 1 B C 29 1_555 B G 45 1_555 B C 30 1_555 B G 44 1_555 -0.209 -1.144 3.858 1.201 6.275 41.026 -2.385 0.443 3.645 8.888 -1.701 41.499 20 CC_C27C28:G42G43_CC C 27 ? C 43 ? C 28 ? C 42 ? 1 B C 30 1_555 B G 44 1_555 B G 31 1_555 B C 43 1_555 -1.006 -1.522 3.210 -6.104 15.396 25.442 -5.694 0.823 2.145 31.107 12.333 30.283 21 CC_C28G29:C41G42_CC C 28 ? C 42 ? C 29 ? C 41 ? 1 B G 31 1_555 B C 43 1_555 B G 32 1_555 B C 42 1_555 -1.039 -2.152 3.254 -5.486 14.559 29.743 -5.844 1.010 2.151 26.225 9.882 33.485 22 CC_G29G30:C40C41_CC C 29 ? C 41 ? C 30 ? C 40 ? 1 B G 32 1_555 B C 42 1_555 B A 33 1_555 B U 41 1_555 -4.886 -3.763 3.494 -28.396 28.820 1.848 -9.762 2.796 0.911 62.325 61.407 40.499 23 CC_G30A31:U39C40_CC C 30 ? C 40 ? C 31 ? C 39 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ADENOSINE MONOPHOSPHATE' AMP 4 HISTIDINE HIS 5 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1H4V '1H4V and 3WC1' 2 ? 'experimental model' PDB 3WC1 '1H4V and 3WC1' #