HEADER HYDROLASE/DNA 22-SEP-14 4REC TITLE A NUCLEASE-DNA COMPLEX FORM 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FANCONI-ASSOCIATED NUCLEASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 373-1017; COMPND 5 SYNONYM: FANCD2/FANCI-ASSOCIATED NUCLEASE 1, MYOTUBULARIN-RELATED COMPND 6 PROTEIN 15; COMPND 7 EC: 3.1.21.-, 3.1.4.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: DNA (40-MER); COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FAN1, KIAA1018, MTMR15; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMAT9S; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS HJC, TPR, SAP, STRUCTURE SPECIFIC NUCLEASE, FANCID2, NUCLEUS, KEYWDS 2 HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Q.ZHAO,X.XUE,S.LONGERICH,P.SUNG,Y.XIONG REVDAT 4 03-APR-24 4REC 1 REMARK REVDAT 3 28-FEB-24 4REC 1 REMARK SEQADV REVDAT 2 14-JAN-15 4REC 1 JRNL REVDAT 1 24-DEC-14 4REC 0 JRNL AUTH Q.ZHAO,X.XUE,S.LONGERICH,P.SUNG,Y.XIONG JRNL TITL STRUCTURAL INSIGHTS INTO 5' FLAP DNA UNWINDING AND INCISION JRNL TITL 2 BY THE HUMAN FAN1 DIMER. JRNL REF NAT COMMUN V. 5 5726 2014 JRNL REFN ESSN 2041-1723 JRNL PMID 25500724 JRNL DOI 10.1038/NCOMMS6726 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 89740 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.320 REMARK 3 FREE R VALUE TEST SET COUNT : 2983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 79.6722 - 6.0688 1.00 4135 142 0.1774 0.1898 REMARK 3 2 6.0688 - 4.8172 1.00 4135 140 0.1900 0.2106 REMARK 3 3 4.8172 - 4.2083 1.00 4130 137 0.1606 0.1943 REMARK 3 4 4.2083 - 3.8235 1.00 4149 142 0.1789 0.1958 REMARK 3 5 3.8235 - 3.5495 1.00 4115 145 0.1837 0.2520 REMARK 3 6 3.5495 - 3.3402 1.00 4152 147 0.2087 0.2879 REMARK 3 7 3.3402 - 3.1729 1.00 4139 131 0.2250 0.3430 REMARK 3 8 3.1729 - 3.0348 1.00 4129 147 0.2300 0.2585 REMARK 3 9 3.0348 - 2.9179 1.00 4102 147 0.2295 0.2705 REMARK 3 10 2.9179 - 2.8173 1.00 4162 124 0.2381 0.2895 REMARK 3 11 2.8173 - 2.7292 1.00 4125 154 0.2691 0.3240 REMARK 3 12 2.7292 - 2.6511 1.00 4140 130 0.2886 0.3567 REMARK 3 13 2.6511 - 2.5813 1.00 4112 147 0.2946 0.3727 REMARK 3 14 2.5813 - 2.5184 1.00 4155 144 0.3047 0.3451 REMARK 3 15 2.5184 - 2.4611 1.00 4137 131 0.3161 0.3547 REMARK 3 16 2.4611 - 2.4087 1.00 4122 148 0.3325 0.3647 REMARK 3 17 2.4087 - 2.3605 1.00 4140 144 0.3628 0.4120 REMARK 3 18 2.3605 - 2.3160 1.00 4068 158 0.3754 0.3985 REMARK 3 19 2.3160 - 2.2746 1.00 4139 141 0.3923 0.4438 REMARK 3 20 2.2746 - 2.2361 1.00 4113 143 0.4245 0.4335 REMARK 3 21 2.2361 - 2.2000 1.00 4158 141 0.4475 0.4445 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5801 REMARK 3 ANGLE : 1.152 8009 REMARK 3 CHIRALITY : 0.048 895 REMARK 3 PLANARITY : 0.006 884 REMARK 3 DIHEDRAL : 21.552 2211 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4REC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000087240. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89740 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 79.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: AN INITIAL MODEL PHASED BY A LOW-RESOLUTION IODINE REMARK 200 -ANOMALOUS DATASET REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M POTASSIUM IODIDE, 0.1MM REMARK 280 SPERMIDINE, 18% PEG3350, 0.1M BISTRIS PROPANE, MICRO-BATCH UNDER REMARK 280 OIL, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.95500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.93000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.80000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.93000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.95500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.80000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 -1.000000 0.000000 0.000000 143.82000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 -54.80000 REMARK 350 BIOMT3 1 0.000000 0.000000 -1.000000 -57.93000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 507 REMARK 465 SER A 508 REMARK 465 VAL A 509 REMARK 465 CYS A 510 REMARK 465 THR A 511 REMARK 465 TRP A 512 REMARK 465 GLY A 513 REMARK 465 LYS A 514 REMARK 465 ASN A 515 REMARK 465 ASP A 562 REMARK 465 ALA A 563 REMARK 465 ALA A 564 REMARK 465 CYS A 565 REMARK 465 GLY A 566 REMARK 465 GLY A 567 REMARK 465 GLN A 568 REMARK 465 GLN A 570 REMARK 465 LEU A 571 REMARK 465 SER A 572 REMARK 465 THR A 573 REMARK 465 VAL A 574 REMARK 465 CYS A 787 REMARK 465 PRO A 788 REMARK 465 GLN A 789 REMARK 465 ARG A 790 REMARK 465 GLY A 791 REMARK 465 MET A 792 REMARK 465 CYS A 793 REMARK 465 LYS A 794 REMARK 465 SER A 795 REMARK 465 VAL A 796 REMARK 465 PHE A 797 REMARK 465 VAL A 798 REMARK 465 MET A 799 REMARK 465 GLU A 800 REMARK 465 ALA A 801 REMARK 465 GLY A 802 REMARK 465 GLU A 803 REMARK 465 ALA A 804 REMARK 465 ALA A 805 REMARK 465 ASP A 806 REMARK 465 PRO A 807 REMARK 465 THR A 808 REMARK 465 THR A 809 REMARK 465 VAL A 810 REMARK 465 LEU A 811 REMARK 465 GLY A 1010 REMARK 465 ALA A 1011 REMARK 465 LYS A 1012 REMARK 465 SER A 1013 REMARK 465 GLN A 1014 REMARK 465 SER A 1015 REMARK 465 LEU A 1016 REMARK 465 SER A 1017 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 575 CG CD1 CD2 REMARK 470 ARG A 739 CG CD NE CZ NH1 NH2 REMARK 470 VAL A1009 CG1 CG2 REMARK 470 DC B 101 P OP1 OP2 REMARK 470 DC B 313 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 886 O HOH A 1367 1.69 REMARK 500 O HOH A 1201 O HOH A 1228 1.75 REMARK 500 O HOH A 1202 O HOH A 1347 1.82 REMARK 500 O GLN A 888 O HOH A 1313 1.83 REMARK 500 O LYS A 635 O HOH A 1368 1.87 REMARK 500 O GLU A 884 O HOH A 1364 1.87 REMARK 500 O MET A 988 O HOH A 1406 1.88 REMARK 500 O HOH A 1202 O HOH A 1278 1.90 REMARK 500 O LEU A 469 O HOH A 1390 1.91 REMARK 500 O GLU A 684 O HOH A 1395 1.93 REMARK 500 N ALA A 992 O HOH A 1406 1.95 REMARK 500 N ASP A 892 O HOH A 1313 1.95 REMARK 500 N GLN A 888 O HOH A 1364 1.97 REMARK 500 O HOH A 1227 O HOH A 1347 1.98 REMARK 500 O HOH A 1270 O HOH A 1374 2.01 REMARK 500 N ASN A 639 O HOH A 1368 2.03 REMARK 500 N ASN A 639 O HOH A 1368 2.03 REMARK 500 O HOH A 1303 O HOH A 1353 2.06 REMARK 500 O HOH A 1227 O HOH A 1278 2.07 REMARK 500 N ARG A 688 O HOH A 1395 2.07 REMARK 500 OP1 DG B 109 O HOH B 414 2.07 REMARK 500 O HOH A 1242 O HOH A 1356 2.09 REMARK 500 N GLY A 957 O HOH A 1409 2.09 REMARK 500 OD1 ASP A 702 O HOH A 1215 2.12 REMARK 500 O HOH A 1278 O HOH A 1347 2.12 REMARK 500 O GLU A 834 O HOH A 1342 2.12 REMARK 500 O LEU A 753 O HOH A 1359 2.13 REMARK 500 O HOH A 1234 O HOH A 1371 2.14 REMARK 500 NE ARG A 945 O HOH A 1265 2.15 REMARK 500 OD1 ASP A 853 O HOH A 1236 2.16 REMARK 500 O HOH A 1372 O HOH A 1407 2.17 REMARK 500 O LEU A 575 O HOH A 1337 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OP1 DG B 317 O HOH A 1248 1655 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT B 14 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG B 314 O3' - P - OP2 ANGL. DEV. = 7.2 DEGREES REMARK 500 DC B 318 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DT B 325 O4' - C1' - N1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 411 171.02 -54.77 REMARK 500 SER A 473 -175.80 -66.73 REMARK 500 ASN A 488 54.13 35.08 REMARK 500 PHE A 660 41.90 -105.44 REMARK 500 GLU A 771 52.79 -94.98 REMARK 500 GLU A 834 -135.02 55.54 REMARK 500 CYS A 871 34.86 -94.38 REMARK 500 ASP A 950 68.20 -157.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 1103 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4REA RELATED DB: PDB REMARK 900 RELATED ID: 4REB RELATED DB: PDB DBREF 4REC A 373 1017 UNP Q9Y2M0 FAN1_HUMAN 373 1017 DBREF 4REC B 11 332 PDB 4REC 4REC 11 332 SEQADV 4REC GLU A 371 UNP Q9Y2M0 EXPRESSION TAG SEQADV 4REC PHE A 372 UNP Q9Y2M0 EXPRESSION TAG SEQADV 4REC ALA A 960 UNP Q9Y2M0 ASP 960 ENGINEERED MUTATION SEQRES 1 A 647 GLU PHE PRO TYR TYR LEU ARG SER PHE LEU VAL VAL LEU SEQRES 2 A 647 LYS THR VAL LEU GLU ASN GLU ASP ASP MET LEU LEU PHE SEQRES 3 A 647 ASP GLU GLN GLU LYS GLY ILE VAL THR LYS PHE TYR GLN SEQRES 4 A 647 LEU SER ALA THR GLY GLN LYS LEU TYR VAL ARG LEU PHE SEQRES 5 A 647 GLN ARG LYS LEU SER TRP ILE LYS MET THR LYS LEU GLU SEQRES 6 A 647 TYR GLU GLU ILE ALA LEU ASP LEU THR PRO VAL ILE GLU SEQRES 7 A 647 GLU LEU THR ASN ALA GLY PHE LEU GLN THR GLU SER GLU SEQRES 8 A 647 LEU GLN GLU LEU SER GLU VAL LEU GLU LEU LEU SER ALA SEQRES 9 A 647 PRO GLU LEU LYS SER LEU ALA LYS THR PHE HIS LEU VAL SEQRES 10 A 647 ASN PRO ASN GLY GLN LYS GLN GLN LEU VAL ASP ALA PHE SEQRES 11 A 647 LEU LYS LEU ALA LYS GLN ARG SER VAL CYS THR TRP GLY SEQRES 12 A 647 LYS ASN LYS PRO GLY ILE GLY ALA VAL ILE LEU LYS ARG SEQRES 13 A 647 ALA LYS ALA LEU ALA GLY GLN SER VAL ARG ILE CYS LYS SEQRES 14 A 647 GLY PRO ARG ALA VAL PHE SER ARG ILE LEU LEU LEU PHE SEQRES 15 A 647 SER LEU THR ASP SER MET GLU ASP GLU ASP ALA ALA CYS SEQRES 16 A 647 GLY GLY GLN GLY GLN LEU SER THR VAL LEU LEU VAL ASN SEQRES 17 A 647 LEU GLY ARG MET GLU PHE PRO SER TYR THR ILE ASN ARG SEQRES 18 A 647 LYS THR HIS ILE PHE GLN ASP ARG ASP ASP LEU ILE ARG SEQRES 19 A 647 TYR ALA ALA ALA THR HIS MET LEU SER ASP ILE SER SER SEQRES 20 A 647 ALA MET ALA ASN GLY ASN TRP GLU GLU ALA LYS GLU LEU SEQRES 21 A 647 ALA GLN CYS ALA LYS ARG ASP TRP ASN ARG LEU LYS ASN SEQRES 22 A 647 HIS PRO SER LEU ARG CYS HIS GLU ASP LEU PRO LEU PHE SEQRES 23 A 647 LEU ARG CYS PHE THR VAL GLY TRP ILE TYR THR ARG ILE SEQRES 24 A 647 LEU SER ARG PHE VAL GLU ILE LEU GLN ARG LEU HIS MET SEQRES 25 A 647 TYR GLU GLU ALA VAL ARG GLU LEU GLU SER LEU LEU SER SEQRES 26 A 647 GLN ARG ILE TYR CYS PRO ASP SER ARG GLY ARG TRP TRP SEQRES 27 A 647 ASP ARG LEU ALA LEU ASN LEU HIS GLN HIS LEU LYS ARG SEQRES 28 A 647 LEU GLU PRO THR ILE LYS CYS ILE THR GLU GLY LEU ALA SEQRES 29 A 647 ASP PRO GLU VAL ARG THR GLY HIS ARG LEU SER LEU TYR SEQRES 30 A 647 GLN ARG ALA VAL ARG LEU ARG GLU SER PRO SER CYS LYS SEQRES 31 A 647 LYS PHE LYS HIS LEU PHE GLN GLN LEU PRO GLU MET ALA SEQRES 32 A 647 VAL GLN ASP VAL LYS HIS VAL THR ILE THR GLY ARG LEU SEQRES 33 A 647 CYS PRO GLN ARG GLY MET CYS LYS SER VAL PHE VAL MET SEQRES 34 A 647 GLU ALA GLY GLU ALA ALA ASP PRO THR THR VAL LEU CYS SEQRES 35 A 647 SER VAL GLU GLU LEU ALA LEU ALA HIS TYR ARG ARG SER SEQRES 36 A 647 GLY PHE ASP GLN GLY ILE HIS GLY GLU GLY SER THR PHE SEQRES 37 A 647 SER THR LEU TYR GLY LEU LEU LEU TRP ASP ILE ILE PHE SEQRES 38 A 647 MET ASP GLY ILE PRO ASP VAL PHE ARG ASN ALA CYS GLN SEQRES 39 A 647 ALA PHE PRO LEU ASP LEU CYS THR ASP SER PHE PHE THR SEQRES 40 A 647 SER ARG ARG PRO ALA LEU GLU ALA ARG LEU GLN LEU ILE SEQRES 41 A 647 HIS ASP ALA PRO GLU GLU SER LEU ARG ALA TRP VAL ALA SEQRES 42 A 647 ALA THR TRP HIS GLU GLN GLU GLY ARG VAL ALA SER LEU SEQRES 43 A 647 VAL SER TRP ASP ARG PHE THR SER LEU GLN GLN ALA GLN SEQRES 44 A 647 ASP LEU VAL SER CYS LEU GLY GLY PRO VAL LEU SER GLY SEQRES 45 A 647 VAL CYS ARG HIS LEU ALA ALA ASP PHE ARG HIS CYS ARG SEQRES 46 A 647 GLY GLY LEU PRO ALA LEU VAL VAL TRP ASN SER GLN SER SEQRES 47 A 647 ARG HIS PHE LYS LEU VAL GLU VAL LYS GLY PRO ASN ASP SEQRES 48 A 647 ARG LEU SER HIS LYS GLN MET ILE TRP LEU ALA GLU LEU SEQRES 49 A 647 GLN LYS LEU GLY ALA GLU VAL GLU VAL CYS HIS VAL VAL SEQRES 50 A 647 ALA VAL GLY ALA LYS SER GLN SER LEU SER SEQRES 1 B 40 DC DG DT DT DG DC DT DA DC DG DC DG DT SEQRES 2 B 40 DG DG DC DG DA DG DC DC DG DT DA DG DC SEQRES 3 B 40 DA DA DC DG DG DC DT DC DG DC DC DA DC SEQRES 4 B 40 DG HET IOD A1101 1 HET IOD A1102 1 HET IOD A1103 1 HETNAM IOD IODIDE ION FORMUL 3 IOD 3(I 1-) FORMUL 6 HOH *245(H2 O) HELIX 1 1 PRO A 373 ASN A 389 1 17 HELIX 2 2 ASN A 389 LEU A 394 1 6 HELIX 3 3 ASP A 397 GLN A 409 1 13 HELIX 4 4 SER A 411 GLN A 423 1 13 HELIX 5 5 THR A 432 LEU A 434 5 3 HELIX 6 6 LEU A 443 ALA A 453 1 11 HELIX 7 7 SER A 460 LEU A 462 5 3 HELIX 8 8 GLU A 464 LEU A 472 1 9 HELIX 9 9 SER A 473 PHE A 484 1 12 HELIX 10 10 GLN A 492 ALA A 504 1 13 HELIX 11 11 ILE A 519 GLY A 532 1 14 HELIX 12 12 CYS A 538 SER A 553 1 16 HELIX 13 13 LEU A 554 SER A 557 5 4 HELIX 14 14 LEU A 576 ARG A 581 5 6 HELIX 15 15 ASP A 598 ASN A 621 1 24 HELIX 16 16 ASN A 623 ARG A 640 1 18 HELIX 17 17 HIS A 644 ASP A 652 1 9 HELIX 18 18 PRO A 654 CYS A 659 1 6 HELIX 19 19 THR A 661 LEU A 680 1 20 HELIX 20 20 MET A 682 GLN A 696 1 15 HELIX 21 21 CYS A 700 ASP A 702 5 3 HELIX 22 22 SER A 703 GLN A 717 1 15 HELIX 23 23 ARG A 721 ASP A 735 1 15 HELIX 24 24 ARG A 739 GLU A 755 1 17 HELIX 25 25 SER A 756 PHE A 766 5 11 HELIX 26 26 SER A 813 SER A 825 1 13 HELIX 27 27 GLU A 834 PHE A 851 1 18 HELIX 28 28 ASP A 873 SER A 878 1 6 HELIX 29 29 ARG A 879 ASP A 892 1 14 HELIX 30 30 PRO A 894 GLU A 910 1 17 HELIX 31 31 SER A 924 ASP A 950 1 27 HELIX 32 32 ASP A 950 GLY A 956 1 7 HELIX 33 33 SER A 984 LEU A 997 1 14 SHEET 1 A 3 ILE A 429 LYS A 430 0 SHEET 2 A 3 SER A 534 ILE A 537 -1 O VAL A 535 N ILE A 429 SHEET 3 A 3 LEU A 456 THR A 458 -1 N GLN A 457 O ARG A 536 SHEET 1 B 5 LYS A 778 THR A 783 0 SHEET 2 B 5 VAL A1001 VAL A1007 1 O HIS A1005 N VAL A 780 SHEET 3 B 5 PHE A 971 LYS A 977 1 N GLU A 975 O CYS A1004 SHEET 4 B 5 LEU A 961 TRP A 964 -1 N LEU A 961 O VAL A 974 SHEET 5 B 5 GLN A 829 HIS A 832 -1 N GLN A 829 O TRP A 964 CISPEP 1 LYS A 516 PRO A 517 0 -11.44 SITE 1 AC1 2 ARG A 982 HOH A1401 SITE 1 AC2 2 GLY A 741 TRP A 990 CRYST1 71.910 109.600 115.860 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013906 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008631 0.00000