HEADER HYDROLASE, TRANSPORT PROTEIN 27-SEP-14 4RFS TITLE STRUCTURE OF A PANTOTHENATE ENERGY COUPLING FACTOR TRANSPORTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENERGY-COUPLING FACTOR TRANSPORTER ATP-BINDING PROTEIN COMPND 3 ECFA2; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: ECF TRANSPORTER A COMPONENT ECFA2; COMPND 6 EC: 3.6.3.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: ENERGY-COUPLING FACTOR TRANSPORTER ATP-BINDING PROTEIN COMPND 10 ECFA1; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: ECF TRANSPORTER A COMPONENT ECFA1; COMPND 13 EC: 3.6.3.-; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: SUBSTRATE BINDING PRITEIN S; COMPND 17 CHAIN: S; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: ENERGY-COUPLING FACTOR TRANSPORTER TRANSMEMBRANE PROTEIN COMPND 21 ECFT; COMPND 22 CHAIN: T; COMPND 23 SYNONYM: ECF TRANSPORTER T COMPONENT ECFT; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS BREVIS; SOURCE 3 ORGANISM_TAXID: 1580; SOURCE 4 GENE: ECFA2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: LACTOBACILLUS BREVIS; SOURCE 9 ORGANISM_TAXID: 1580; SOURCE 10 GENE: ECFA1; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: LACTOBACILLUS BREVIS; SOURCE 15 ORGANISM_TAXID: 1580; SOURCE 16 GENE: LVIS_0658; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: LACTOBACILLUS BREVIS; SOURCE 21 ORGANISM_TAXID: 1580; SOURCE 22 GENE: ECFT; SOURCE 23 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSPORTER, ECF, HYDROLASE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.ZHANG,Z.BAO,Q.ZHAO,H.GUO,K.XU,P.ZHANG REVDAT 3 28-FEB-24 4RFS 1 SEQADV REVDAT 2 28-JAN-15 4RFS 1 JRNL REVDAT 1 24-DEC-14 4RFS 0 JRNL AUTH M.ZHANG,Z.BAO,Q.ZHAO,H.GUO,K.XU,C.WANG,P.ZHANG JRNL TITL STRUCTURE OF A PANTOTHENATE TRANSPORTER AND IMPLICATIONS FOR JRNL TITL 2 ECF MODULE SHARING AND ENERGY COUPLING OF GROUP II ECF JRNL TITL 3 TRANSPORTERS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 18560 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 25512487 JRNL DOI 10.1073/PNAS.1412246112 REMARK 2 REMARK 2 RESOLUTION. 3.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.2_869) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 28312 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5448 - 6.9503 0.94 2757 170 0.2504 0.2836 REMARK 3 2 6.9503 - 5.5223 1.00 2800 145 0.2684 0.3219 REMARK 3 3 5.5223 - 4.8259 1.00 2776 150 0.2249 0.2780 REMARK 3 4 4.8259 - 4.3854 0.99 2728 148 0.1709 0.2285 REMARK 3 5 4.3854 - 4.0715 0.98 2679 143 0.1690 0.2771 REMARK 3 6 4.0715 - 3.8317 0.97 2692 130 0.1875 0.2524 REMARK 3 7 3.8317 - 3.6399 0.97 2679 130 0.2068 0.3314 REMARK 3 8 3.6399 - 3.4816 0.97 2649 144 0.2333 0.3397 REMARK 3 9 3.4816 - 3.3477 0.97 2634 140 0.2657 0.3633 REMARK 3 10 3.3477 - 3.2322 0.92 2500 118 0.2874 0.4013 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 40.77 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 30.88350 REMARK 3 B22 (A**2) : 51.37150 REMARK 3 B33 (A**2) : 34.27120 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7788 REMARK 3 ANGLE : 1.476 10588 REMARK 3 CHIRALITY : 0.089 1246 REMARK 3 PLANARITY : 0.007 1351 REMARK 3 DIHEDRAL : 19.188 2825 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 15.8380 170.9193 186.2089 REMARK 3 T TENSOR REMARK 3 T11: 0.3387 T22: 0.5111 REMARK 3 T33: 0.6183 T12: 0.0595 REMARK 3 T13: -0.0051 T23: 0.0552 REMARK 3 L TENSOR REMARK 3 L11: 1.2559 L22: 1.0551 REMARK 3 L33: 1.5439 L12: 0.3254 REMARK 3 L13: -0.5405 L23: -0.7975 REMARK 3 S TENSOR REMARK 3 S11: 0.1445 S12: -0.4246 S13: -0.0342 REMARK 3 S21: 0.1325 S22: -0.1034 S23: -0.0519 REMARK 3 S31: 0.0139 S32: 0.4001 S33: -0.0481 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RFS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087291. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97913 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28312 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.250 REMARK 200 RESOLUTION RANGE LOW (A) : 37.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.88400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, 20% PEG2000, 15% GLYCEROL, REMARK 280 0.2M MGCL2, PH 8.4, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.86300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.57050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.62000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.57050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.86300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.62000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, S, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 286 REMARK 465 ALA A 287 REMARK 465 ASP A 288 REMARK 465 HIS A 289 REMARK 465 VAL A 290 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ASN B 278 REMARK 465 THR B 279 REMARK 465 MET S 1 REMARK 465 THR S 2 REMARK 465 ALA S 149 REMARK 465 THR S 150 REMARK 465 ALA S 151 REMARK 465 PHE S 152 REMARK 465 GLY S 153 REMARK 465 ALA S 154 REMARK 465 THR S 155 REMARK 465 GLY S 156 REMARK 465 ASN S 157 REMARK 465 GLN S 158 REMARK 465 THR S 159 REMARK 465 THR S 201 REMARK 465 THR S 202 REMARK 465 LYS S 203 REMARK 465 MET T -13 REMARK 465 GLY T -12 REMARK 465 SER T -11 REMARK 465 SER T -10 REMARK 465 HIS T -9 REMARK 465 HIS T -8 REMARK 465 HIS T -7 REMARK 465 HIS T -6 REMARK 465 HIS T -5 REMARK 465 HIS T -4 REMARK 465 SER T -3 REMARK 465 GLN T -2 REMARK 465 ASP T -1 REMARK 465 PRO T 0 REMARK 465 MET T 1 REMARK 465 SER T 2 REMARK 465 ASN T 3 REMARK 465 PHE T 4 REMARK 465 ILE T 5 REMARK 465 PHE T 6 REMARK 465 GLY T 7 REMARK 465 ARG T 8 REMARK 465 TYR T 9 REMARK 465 LEU T 10 REMARK 465 PRO T 11 REMARK 465 LEU T 12 REMARK 465 ASP T 13 REMARK 465 SER T 14 REMARK 465 VAL T 15 REMARK 465 VAL T 16 REMARK 465 ALA T 98 REMARK 465 PHE T 99 REMARK 465 ILE T 100 REMARK 465 ASN T 101 REMARK 465 VAL T 102 REMARK 465 ILE T 239 REMARK 465 LEU T 240 REMARK 465 THR T 241 REMARK 465 TRP T 242 REMARK 465 GLN T 243 REMARK 465 ARG T 244 REMARK 465 ARG T 264 REMARK 465 HIS T 265 REMARK 465 TRP T 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL S 148 CG1 CG2 REMARK 470 HIS T 17 CG ND1 CD2 CE1 NE2 REMARK 470 PHE T 95 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS T 96 CG ND1 CD2 CE1 NE2 REMARK 470 TRP T 97 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP T 97 CZ3 CH2 REMARK 470 THR T 103 OG1 CG2 REMARK 470 TRP T 149 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP T 149 CZ3 CH2 REMARK 470 VAL T 150 CG1 CG2 REMARK 470 LYS T 151 CG CD CE NZ REMARK 470 ARG T 238 CG CD NE CZ NH1 NH2 REMARK 470 ARG T 245 CG CD NE CZ NH1 NH2 REMARK 470 PHE T 263 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY T 256 CD1 ILE T 260 1.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 106 C ILE A 107 N 0.152 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 105 O - C - N ANGL. DEV. = -10.9 DEGREES REMARK 500 PRO A 111 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 PRO B 58 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 PRO S 32 C - N - CA ANGL. DEV. = 11.4 DEGREES REMARK 500 TYR T 94 O - C - N ANGL. DEV. = -12.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 19 132.11 -1.84 REMARK 500 ASP A 25 73.38 48.01 REMARK 500 HIS A 41 157.67 -44.38 REMARK 500 ALA A 55 22.67 88.81 REMARK 500 SER A 61 144.43 -179.23 REMARK 500 ASP A 67 -132.47 53.71 REMARK 500 ALA A 78 -29.53 -172.21 REMARK 500 PHE A 99 -12.12 -160.99 REMARK 500 GLU A 171 81.67 -155.88 REMARK 500 GLN A 195 -0.11 87.06 REMARK 500 GLN B 14 -8.73 80.04 REMARK 500 ASP B 16 -154.28 41.91 REMARK 500 ASN B 18 -157.36 -81.45 REMARK 500 GLN B 19 -145.67 57.76 REMARK 500 ASP B 25 74.81 53.26 REMARK 500 HIS B 41 -150.29 -76.12 REMARK 500 GLN B 93 20.01 -140.75 REMARK 500 ASN B 109 40.28 -100.92 REMARK 500 ARG B 110 21.62 -143.65 REMARK 500 ALA B 158 92.79 43.96 REMARK 500 GLN B 190 -1.05 86.94 REMARK 500 PRO B 259 146.80 -39.79 REMARK 500 ILE S 31 95.45 -161.93 REMARK 500 SER S 37 122.68 176.72 REMARK 500 SER S 77 -76.28 -76.16 REMARK 500 PHE S 85 23.53 -78.10 REMARK 500 ALA S 128 -71.60 -59.65 REMARK 500 THR S 130 30.53 -67.96 REMARK 500 ASN S 131 -50.24 -127.98 REMARK 500 PRO S 146 -81.58 -98.13 REMARK 500 THR S 170 38.25 -90.14 REMARK 500 ASN S 171 -41.66 -136.89 REMARK 500 ILE S 173 -51.28 -125.22 REMARK 500 LEU S 181 -72.76 -69.53 REMARK 500 LEU S 190 -36.81 -168.55 REMARK 500 LEU T 19 45.43 -62.69 REMARK 500 PRO T 21 -83.33 -70.59 REMARK 500 ARG T 22 -60.74 -101.48 REMARK 500 ALA T 23 -39.26 -36.46 REMARK 500 ALA T 38 93.78 -59.15 REMARK 500 SER T 43 -81.20 -68.79 REMARK 500 HIS T 92 5.52 -154.71 REMARK 500 PHE T 95 -131.00 57.57 REMARK 500 PHE T 117 46.54 -73.16 REMARK 500 LEU T 118 -43.64 -144.16 REMARK 500 ALA T 141 39.91 -90.13 REMARK 500 SER T 142 0.86 -158.18 REMARK 500 PRO T 146 -122.30 -65.23 REMARK 500 LEU T 147 -20.96 50.54 REMARK 500 VAL T 150 14.39 -164.07 REMARK 500 REMARK 500 THIS ENTRY HAS 55 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG T 226 0.27 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 4RFS A 1 290 UNP Q03PY6 ECFA2_LACBA 1 290 DBREF 4RFS B 1 279 UNP Q03PY5 ECFA1_LACBA 1 279 DBREF 4RFS S 1 203 UNP Q03SM0 Q03SM0_LACBA 1 203 DBREF 4RFS T 1 266 UNP Q03PY7 ECFT_LACBA 1 266 SEQADV 4RFS MET T -13 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS GLY T -12 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS SER T -11 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS SER T -10 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS HIS T -9 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS HIS T -8 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS HIS T -7 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS HIS T -6 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS HIS T -5 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS HIS T -4 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS SER T -3 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS GLN T -2 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS ASP T -1 UNP Q03PY7 EXPRESSION TAG SEQADV 4RFS PRO T 0 UNP Q03PY7 EXPRESSION TAG SEQRES 1 A 290 MET ALA ILE ALA PHE GLU HIS VAL THR TYR THR TYR GLN SEQRES 2 A 290 ALA GLY THR PRO MET ALA HIS THR ALA LEU THR ASP VAL SEQRES 3 A 290 SER LEU THR VAL PRO ASP ARG GLY TYR LEU ALA ILE ILE SEQRES 4 A 290 GLY HIS THR GLY SER GLY LYS SER THR LEU ILE GLN GLN SEQRES 5 A 290 LEU ASN ALA LEU LEU LYS PRO THR SER GLY THR ILE LYS SEQRES 6 A 290 ILE ASP GLU PHE THR ILE THR PRO GLU THR THR ASN ALA SEQRES 7 A 290 ALA LEU LYS PRO LEU ARG GLN HIS VAL GLY MET VAL PHE SEQRES 8 A 290 GLN PHE PRO GLU ASN GLN LEU PHE GLU GLU THR VAL ARG SEQRES 9 A 290 GLN ASP ILE ALA PHE GLY PRO LYS ASN PHE GLY MET ALA SEQRES 10 A 290 ASP ALA ASP ALA LEU ALA LEU ALA ASP GLU MET LEU THR SEQRES 11 A 290 THR VAL GLY LEU ASP GLN SER TYR ALA GLU ARG SER PRO SEQRES 12 A 290 PHE GLU LEU SER GLY GLY GLN MET ARG ARG VAL ALA ILE SEQRES 13 A 290 ALA GLY VAL LEU ALA MET GLN PRO LYS VAL LEU VAL LEU SEQRES 14 A 290 ASP GLU PRO THR ALA GLY LEU ASP PRO GLN GLY ARG GLN SEQRES 15 A 290 GLU MET MET ARG LEU PHE ALA ARG LEU HIS GLN GLU GLN SEQRES 16 A 290 GLY LEU THR ILE VAL LEU VAL THR HIS GLN MET GLU ASP SEQRES 17 A 290 VAL ALA GLN TYR ALA GLU GLN VAL ALA VAL MET HIS GLU SEQRES 18 A 290 GLY ARG LEU MET LYS PHE GLY THR PRO ALA ASP VAL PHE SEQRES 19 A 290 SER ASN ARG GLU TRP LEU GLN ASP HIS GLN LEU ASP VAL SEQRES 20 A 290 PRO GLN ALA ALA GLN PHE ALA ARG ARG LEU ARG ASP ARG SEQRES 21 A 290 GLY LEU THR PHE PRO LYS GLN PRO LEU THR ALA ASP GLN SEQRES 22 A 290 LEU ALA ASP TYR LEU ALA GLN GLN TRP ALA GLN ARG GLY SEQRES 23 A 290 ALA ASP HIS VAL SEQRES 1 B 279 MET THR GLU ASN ILE ILE SER VAL ASP HIS LEU THR TYR SEQRES 2 B 279 GLN TYR ASP GLU ASN GLN ALA PRO ALA LEU THR ASP VAL SEQRES 3 B 279 SER PHE THR VAL HIS ALA GLY GLU TRP LEU ALA ILE VAL SEQRES 4 B 279 GLY HIS ASN GLY SER GLY LYS SER THR LEU ALA LYS SER SEQRES 5 B 279 LEU ASP GLY LEU LEU PRO PHE THR GLN GLY SER VAL THR SEQRES 6 B 279 VAL GLY GLY ILE THR LEU THR PRO GLU THR VAL TRP GLN SEQRES 7 B 279 VAL ARG GLU GLN ILE GLY MET ILE PHE GLN ASN PRO ASP SEQRES 8 B 279 ASN GLN PHE VAL GLY ALA THR VAL GLU ASP ASP VAL ALA SEQRES 9 B 279 PHE GLY LEU GLU ASN ARG GLN ILE SER ARG ASP GLU MET SEQRES 10 B 279 VAL PRO ARG VAL GLN ALA ALA LEU ALA GLN VAL GLY MET SEQRES 11 B 279 THR SER PHE ALA GLN ARG GLU PRO SER SER LEU SER GLY SEQRES 12 B 279 GLY GLN LYS GLN ARG VAL ALA LEU ALA GLY ILE VAL ALA SEQRES 13 B 279 ILE ALA PRO LYS ILE LEU ILE LEU ASP GLU ALA THR SER SEQRES 14 B 279 MET LEU ASP PRO GLN GLY ARG ILE GLU MET LEU ALA ILE SEQRES 15 B 279 VAL ARG GLN LEU ARG GLN GLN GLN ASN LEU THR VAL ILE SEQRES 16 B 279 SER ILE THR HIS ASP ILE ASP GLU ALA ALA SER ALA ASP SEQRES 17 B 279 ARG VAL LEU VAL ILE ASP ASP GLY ARG LEU VAL ASP GLU SEQRES 18 B 279 ALA VAL PRO SER GLN ILE PHE GLU ARG GLY THR GLN LEU SEQRES 19 B 279 VAL GLU MET GLY LEU ASP LEU PRO PHE THR GLU LYS LEU SEQRES 20 B 279 LYS ALA ALA LEU ARG GLN ARG GLY ILE THR PRO PRO THR SEQRES 21 B 279 THR TYR GLN THR ALA ALA GLU MET GLU GLU TRP LEU TRP SEQRES 22 B 279 GLN SER LEU SER ASN THR SEQRES 1 S 203 MET THR ARG HIS LYS THR PHE ARG LEU VAL VAL ASP ALA SEQRES 2 S 203 LEU LEU MET ALA ILE VAL LEU LEU GLN ASN LEU VAL PRO SEQRES 3 S 203 PHE LEU GLY TYR ILE PRO PHE GLY PRO PHE SER MET THR SEQRES 4 S 203 LEU ILE GLY LEU THR VAL ILE VAL ALA GLY SER ALA LEU SEQRES 5 S 203 GLY PRO ARG ASP GLY LEU LEU ILE GLY GLY PHE TRP GLY SEQRES 6 S 203 LEU ILE THR PHE VAL ARG ALA PHE THR TRP PRO SER SER SEQRES 7 S 203 PRO VAL ALA PRO LEU ILE PHE THR ASN PRO LEU ILE SER SEQRES 8 S 203 ILE LEU PRO ARG LEU LEU MET GLY LEU VAL ALA GLY SER SEQRES 9 S 203 LEU TYR LEU TRP GLY ARG HIS ARG GLN TRP SER MET ARG SEQRES 10 S 203 GLN ALA MET GLN VAL ALA ALA GLY CYS ALA ALA LEU THR SEQRES 11 S 203 ASN THR VAL LEU VAL LEU GLY LEU VAL PHE LEU PHE TYR SEQRES 12 S 203 GLN THR PRO ALA VAL ALA THR ALA PHE GLY ALA THR GLY SEQRES 13 S 203 ASN GLN THR LEU GLY TYR VAL LEU MET ILE SER LEU PHE SEQRES 14 S 203 THR ASN GLY ILE PRO GLU LEU ILE LEU ASP VAL LEU VAL SEQRES 15 S 203 ALA PRO LEU ILE ALA MET PRO LEU ARG ARG GLN TRP GLU SEQRES 16 S 203 ARG LEU LYS PRO GLN THR THR LYS SEQRES 1 T 280 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 T 280 PRO MET SER ASN PHE ILE PHE GLY ARG TYR LEU PRO LEU SEQRES 3 T 280 ASP SER VAL VAL HIS ARG LEU ASP PRO ARG ALA LYS LEU SEQRES 4 T 280 MET LEU SER PHE CYS TYR ILE ILE VAL VAL PHE LEU ALA SEQRES 5 T 280 ASN ASN ILE TRP SER TYR ALA ILE LEU ILE ALA PHE THR SEQRES 6 T 280 VAL GLY ALA ILE LEU SER SER LYS ILE SER LEU GLY PHE SEQRES 7 T 280 PHE LEU LYS GLY ILE ARG PRO LEU LEU TRP LEU ILE VAL SEQRES 8 T 280 PHE THR VAL VAL LEU GLN LEU LEU PHE SER PRO ALA GLY SEQRES 9 T 280 GLY HIS THR TYR PHE HIS TRP ALA PHE ILE ASN VAL THR SEQRES 10 T 280 GLN ASP GLY LEU ILE ASN ALA GLY TYR ILE PHE VAL ARG SEQRES 11 T 280 PHE LEU LEU ILE ILE MET MET SER THR LEU LEU THR LEU SEQRES 12 T 280 SER THR GLN PRO LEU ASP ILE ALA THR GLY LEU ALA SER SEQRES 13 T 280 LEU MET LYS PRO LEU ARG TRP VAL LYS VAL PRO VAL ASP SEQRES 14 T 280 THR LEU ALA MET MET LEU SER ILE ALA LEU ARG PHE VAL SEQRES 15 T 280 PRO THR LEU MET ASP GLU ALA THR LYS ILE MET ASN ALA SEQRES 16 T 280 GLN ARG ALA ARG GLY VAL ASP PHE GLY GLU GLY GLY LEU SEQRES 17 T 280 PHE LYS GLN ALA LYS SER LEU ILE PRO LEU MET VAL PRO SEQRES 18 T 280 LEU PHE MET SER ALA PHE ASN ARG ALA GLU ASP LEU SER SEQRES 19 T 280 THR ALA MET GLU ALA ARG GLY TYR GLN ASP SER GLU HIS SEQRES 20 T 280 ARG SER GLN TYR ARG ILE LEU THR TRP GLN ARG ARG ASP SEQRES 21 T 280 THR VAL THR TRP LEU LEU PHE LEU LEU GLY PHE VAL ALA SEQRES 22 T 280 ILE LEU ILE PHE ARG HIS TRP HELIX 1 1 LEU A 49 ASN A 54 1 6 HELIX 2 2 PRO A 82 HIS A 86 1 5 HELIX 3 3 PHE A 93 LEU A 98 5 6 HELIX 4 4 VAL A 103 ASN A 113 1 11 HELIX 5 5 ALA A 117 GLY A 133 1 17 HELIX 6 6 ASP A 135 ARG A 141 5 7 HELIX 7 7 SER A 147 ALA A 161 1 15 HELIX 8 8 ASP A 177 GLU A 194 1 18 HELIX 9 9 GLN A 205 ALA A 213 1 9 HELIX 10 10 THR A 229 SER A 235 1 7 HELIX 11 11 ASN A 236 HIS A 243 1 8 HELIX 12 12 PRO A 248 ARG A 260 1 13 HELIX 13 13 THR A 270 ARG A 285 1 16 HELIX 14 14 GLY B 45 LEU B 53 1 9 HELIX 15 15 VAL B 76 GLU B 81 1 6 HELIX 16 16 THR B 98 ASN B 109 1 12 HELIX 17 17 SER B 113 VAL B 128 1 16 HELIX 18 18 GLY B 129 ARG B 136 5 8 HELIX 19 19 SER B 142 ALA B 158 1 17 HELIX 20 20 ASP B 172 GLN B 189 1 18 HELIX 21 21 ASP B 200 SER B 206 1 7 HELIX 22 22 VAL B 223 PHE B 228 1 6 HELIX 23 23 GLU B 229 GLY B 231 5 3 HELIX 24 24 THR B 232 GLY B 238 1 7 HELIX 25 25 PRO B 242 GLN B 253 1 12 HELIX 26 26 THR B 264 LEU B 276 1 13 HELIX 27 27 HIS S 4 VAL S 25 1 22 HELIX 28 28 VAL S 25 GLY S 29 1 5 HELIX 29 29 LEU S 40 ALA S 51 1 12 HELIX 30 30 GLY S 53 THR S 74 1 22 HELIX 31 31 VAL S 80 PHE S 85 1 6 HELIX 32 32 ASN S 87 LEU S 97 1 11 HELIX 33 33 LEU S 97 ARG S 112 1 16 HELIX 34 34 SER S 115 GLN S 144 1 30 HELIX 35 35 GLY S 161 THR S 170 1 10 HELIX 36 36 ILE S 173 ILE S 186 1 14 HELIX 37 37 ALA S 187 LYS S 198 1 12 HELIX 38 38 ARG T 22 PHE T 36 1 15 HELIX 39 39 TYR T 44 LYS T 59 1 16 HELIX 40 40 GLY T 63 GLY T 68 1 6 HELIX 41 41 ILE T 69 GLY T 90 1 22 HELIX 42 42 GLN T 104 LEU T 129 1 26 HELIX 43 43 GLN T 132 ALA T 141 1 10 HELIX 44 44 PRO T 153 GLY T 186 1 34 HELIX 45 45 LEU T 194 LYS T 199 1 6 HELIX 46 46 LEU T 201 ARG T 226 1 26 HELIX 47 47 ASP T 246 PHE T 253 1 8 SHEET 1 A 4 HIS A 20 VAL A 30 0 SHEET 2 A 4 ILE A 3 TYR A 12 -1 N TYR A 12 O HIS A 20 SHEET 3 A 4 SER A 61 ILE A 66 -1 O THR A 63 N GLU A 6 SHEET 4 A 4 PHE A 69 ILE A 71 -1 O ILE A 71 N ILE A 64 SHEET 1 B 6 VAL A 87 VAL A 90 0 SHEET 2 B 6 VAL A 166 LEU A 169 1 O VAL A 168 N GLY A 88 SHEET 3 B 6 THR A 198 VAL A 202 1 O THR A 198 N LEU A 167 SHEET 4 B 6 TYR A 35 ILE A 39 1 N LEU A 36 O LEU A 201 SHEET 5 B 6 GLN A 215 HIS A 220 1 O GLN A 215 N ALA A 37 SHEET 6 B 6 ARG A 223 GLY A 228 -1 O GLY A 228 N VAL A 216 SHEET 1 C 4 LEU B 23 VAL B 30 0 SHEET 2 C 4 ASN B 4 LEU B 11 -1 N ASP B 9 O VAL B 26 SHEET 3 C 4 GLN B 61 VAL B 66 -1 O THR B 65 N ILE B 5 SHEET 4 C 4 ILE B 69 THR B 70 -1 O ILE B 69 N VAL B 66 SHEET 1 D 6 ILE B 83 ILE B 86 0 SHEET 2 D 6 ILE B 161 ASP B 165 1 O ILE B 161 N GLY B 84 SHEET 3 D 6 THR B 193 ILE B 197 1 O ILE B 195 N LEU B 164 SHEET 4 D 6 TRP B 35 GLY B 40 1 N ILE B 38 O SER B 196 SHEET 5 D 6 ARG B 209 ASP B 214 1 O LEU B 211 N ALA B 37 SHEET 6 D 6 ARG B 217 ALA B 222 -1 O ALA B 222 N VAL B 210 SHEET 1 E 2 TYR S 30 PRO S 32 0 SHEET 2 E 2 SER S 37 THR S 39 -1 O MET S 38 N ILE S 31 CISPEP 1 PHE S 33 GLY S 34 0 7.53 CISPEP 2 GLY T 193 LEU T 194 0 -23.86 CRYST1 77.726 145.240 157.141 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012866 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006364 0.00000