HEADER TRANSFERASE 05-OCT-14 4RI7 TITLE CRYSTAL STRUCTURE OF POPLAR GLUTATHIONE TRANSFERASE F1 MUTANT SER 13 TITLE 2 CYS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHI CLASS GLUTATHIONE TRANSFERASE GSTF1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GLUTATHIONE TRANSFERASE F1; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POPULUS TREMULA X POPULUS TREMULOIDES; SOURCE 3 ORGANISM_TAXID: 47664; SOURCE 4 GENE: POPTR_0002S01650G; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLUTATHIONE TRANSFERASE FOLD, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.PEGEOT,S.MATHIOT,C.DIDIERJEAN,N.ROUHIER REVDAT 2 20-SEP-23 4RI7 1 REMARK SEQADV LINK REVDAT 1 21-JAN-15 4RI7 0 JRNL AUTH H.PEGEOT,C.S.KOH,B.PETRE,S.MATHIOT,S.DUPLESSIS,A.HECKER, JRNL AUTH 2 C.DIDIERJEAN,N.ROUHIER JRNL TITL THE POPLAR PHI CLASS GLUTATHIONE TRANSFERASE: EXPRESSION, JRNL TITL 2 ACTIVITY AND STRUCTURE OF GSTF1. JRNL REF FRONT PLANT SCI V. 5 712 2014 JRNL REFN ESSN 1664-462X JRNL PMID 25566286 JRNL DOI 10.3389/FPLS.2014.00712 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 36817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.8736 - 4.2264 1.00 2989 166 0.1460 0.1534 REMARK 3 2 4.2264 - 3.3551 1.00 2855 148 0.1172 0.1534 REMARK 3 3 3.3551 - 2.9311 1.00 2812 147 0.1312 0.1797 REMARK 3 4 2.9311 - 2.6632 1.00 2799 161 0.1464 0.1900 REMARK 3 5 2.6632 - 2.4723 1.00 2777 153 0.1468 0.2077 REMARK 3 6 2.4723 - 2.3266 1.00 2766 159 0.1416 0.2038 REMARK 3 7 2.3266 - 2.2101 1.00 2750 156 0.1633 0.2098 REMARK 3 8 2.2101 - 2.1139 1.00 2804 125 0.1511 0.2054 REMARK 3 9 2.1139 - 2.0325 1.00 2755 141 0.1739 0.2171 REMARK 3 10 2.0325 - 1.9624 1.00 2750 142 0.1774 0.2835 REMARK 3 11 1.9624 - 1.9010 0.94 2590 137 0.2005 0.2433 REMARK 3 12 1.9010 - 1.8467 0.83 2309 108 0.2143 0.2876 REMARK 3 13 1.8467 - 1.7980 0.73 2008 110 0.2266 0.2886 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3570 REMARK 3 ANGLE : 1.301 4840 REMARK 3 CHIRALITY : 0.049 535 REMARK 3 PLANARITY : 0.008 623 REMARK 3 DIHEDRAL : 13.327 1338 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7819 -7.0871 0.1502 REMARK 3 T TENSOR REMARK 3 T11: 0.1364 T22: 0.1210 REMARK 3 T33: 0.0994 T12: 0.0303 REMARK 3 T13: 0.0191 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.0460 L22: 0.7100 REMARK 3 L33: 1.3652 L12: -0.2655 REMARK 3 L13: 0.1958 L23: -0.0855 REMARK 3 S TENSOR REMARK 3 S11: 0.0765 S12: 0.2013 S13: -0.0322 REMARK 3 S21: -0.2525 S22: -0.0522 S23: -0.0686 REMARK 3 S31: 0.0087 S32: -0.0207 S33: -0.0299 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1144 4.8682 -7.6586 REMARK 3 T TENSOR REMARK 3 T11: 0.4951 T22: 0.1996 REMARK 3 T33: 0.1588 T12: 0.1575 REMARK 3 T13: 0.0521 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 0.9633 L22: 1.8028 REMARK 3 L33: 0.6130 L12: -0.4840 REMARK 3 L13: 0.0051 L23: 0.3368 REMARK 3 S TENSOR REMARK 3 S11: 0.1129 S12: 0.2123 S13: 0.2236 REMARK 3 S21: -0.5369 S22: -0.1242 S23: -0.0938 REMARK 3 S31: -0.3551 S32: -0.0812 S33: 0.0787 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2449 -6.7558 3.7206 REMARK 3 T TENSOR REMARK 3 T11: 0.1013 T22: 0.1325 REMARK 3 T33: 0.0956 T12: 0.0343 REMARK 3 T13: 0.0054 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 1.0500 L22: 1.7636 REMARK 3 L33: 0.5582 L12: -0.2192 REMARK 3 L13: 0.0607 L23: 0.1799 REMARK 3 S TENSOR REMARK 3 S11: 0.0676 S12: 0.0783 S13: -0.0994 REMARK 3 S21: -0.1254 S22: -0.0550 S23: 0.0633 REMARK 3 S31: -0.0772 S32: -0.1561 S33: -0.0398 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3425 -17.0416 12.7722 REMARK 3 T TENSOR REMARK 3 T11: 0.1188 T22: 0.0802 REMARK 3 T33: 0.1589 T12: 0.0243 REMARK 3 T13: -0.0120 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.7559 L22: 0.6636 REMARK 3 L33: 2.9735 L12: -0.0105 REMARK 3 L13: 0.3940 L23: -0.7593 REMARK 3 S TENSOR REMARK 3 S11: 0.0775 S12: 0.0488 S13: -0.1860 REMARK 3 S21: 0.1077 S22: -0.0026 S23: -0.0476 REMARK 3 S31: 0.2193 S32: 0.0943 S33: -0.0454 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3260 6.0146 14.4050 REMARK 3 T TENSOR REMARK 3 T11: 0.1004 T22: 0.1196 REMARK 3 T33: 0.1208 T12: 0.0114 REMARK 3 T13: -0.0010 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.0479 L22: 1.7967 REMARK 3 L33: 1.1608 L12: 0.1235 REMARK 3 L13: -0.3903 L23: -0.3794 REMARK 3 S TENSOR REMARK 3 S11: 0.0797 S12: 0.0679 S13: 0.1321 REMARK 3 S21: -0.1650 S22: -0.0732 S23: 0.0304 REMARK 3 S31: -0.1163 S32: -0.0435 S33: -0.0176 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2623 11.7945 21.9897 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.1272 REMARK 3 T33: 0.1580 T12: -0.0268 REMARK 3 T13: 0.0138 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.9578 L22: 4.9825 REMARK 3 L33: 2.0171 L12: -1.9313 REMARK 3 L13: 0.9375 L23: -1.8251 REMARK 3 S TENSOR REMARK 3 S11: -0.0173 S12: -0.0398 S13: 0.2065 REMARK 3 S21: 0.0149 S22: -0.0096 S23: 0.0289 REMARK 3 S31: -0.1251 S32: -0.0336 S33: 0.0170 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 153 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9972 2.4374 16.3018 REMARK 3 T TENSOR REMARK 3 T11: 0.0885 T22: 0.1100 REMARK 3 T33: 0.1393 T12: -0.0145 REMARK 3 T13: 0.0341 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.1313 L22: 1.2327 REMARK 3 L33: 1.1023 L12: 0.3555 REMARK 3 L13: 0.1172 L23: -0.1324 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: 0.0390 S13: 0.0587 REMARK 3 S21: 0.0205 S22: 0.0366 S23: -0.1174 REMARK 3 S31: -0.0969 S32: 0.1027 S33: -0.0638 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 201 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6296 -2.2895 1.2498 REMARK 3 T TENSOR REMARK 3 T11: 0.1399 T22: 0.1868 REMARK 3 T33: 0.1671 T12: 0.0080 REMARK 3 T13: 0.0757 T23: -0.0383 REMARK 3 L TENSOR REMARK 3 L11: 2.1762 L22: 1.3452 REMARK 3 L33: 3.9193 L12: -1.0171 REMARK 3 L13: 1.7033 L23: -0.0272 REMARK 3 S TENSOR REMARK 3 S11: 0.0958 S12: 0.3386 S13: -0.0415 REMARK 3 S21: -0.2919 S22: -0.0318 S23: -0.2445 REMARK 3 S31: -0.0618 S32: 0.2654 S33: 0.0612 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5214 -2.4728 33.5463 REMARK 3 T TENSOR REMARK 3 T11: 0.1450 T22: 0.1127 REMARK 3 T33: 0.0867 T12: 0.0166 REMARK 3 T13: 0.0134 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.8412 L22: 0.6860 REMARK 3 L33: 0.6054 L12: 0.1055 REMARK 3 L13: 0.1762 L23: -0.0705 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: -0.0912 S13: -0.0237 REMARK 3 S21: 0.2193 S22: 0.0201 S23: 0.0695 REMARK 3 S31: -0.0859 S32: -0.1390 S33: 0.0188 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 40 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2563 4.8350 35.2039 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.1191 REMARK 3 T33: 0.1018 T12: -0.0278 REMARK 3 T13: -0.0300 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.7630 L22: 2.5643 REMARK 3 L33: 0.7575 L12: 0.1717 REMARK 3 L13: -0.5801 L23: 0.8719 REMARK 3 S TENSOR REMARK 3 S11: -0.0248 S12: -0.1013 S13: -0.0033 REMARK 3 S21: 0.2465 S22: 0.0940 S23: -0.0731 REMARK 3 S31: -0.3204 S32: 0.1306 S33: -0.0705 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4054 -11.3276 25.0677 REMARK 3 T TENSOR REMARK 3 T11: 0.0907 T22: 0.0772 REMARK 3 T33: 0.1039 T12: -0.0114 REMARK 3 T13: 0.0130 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 1.1506 L22: 0.5991 REMARK 3 L33: 1.0966 L12: 0.0856 REMARK 3 L13: 0.2364 L23: -0.1922 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.0272 S13: -0.1644 REMARK 3 S21: -0.0731 S22: -0.0053 S23: -0.1226 REMARK 3 S31: 0.0890 S32: -0.0192 S33: 0.0190 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 93 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7631 6.0255 16.6190 REMARK 3 T TENSOR REMARK 3 T11: 0.0790 T22: 0.1290 REMARK 3 T33: 0.0765 T12: -0.0073 REMARK 3 T13: 0.0014 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.0180 L22: 2.3053 REMARK 3 L33: 1.0324 L12: -0.0946 REMARK 3 L13: -0.2615 L23: 0.9038 REMARK 3 S TENSOR REMARK 3 S11: 0.0835 S12: -0.0909 S13: 0.0866 REMARK 3 S21: -0.0179 S22: -0.0934 S23: -0.1198 REMARK 3 S31: -0.0994 S32: 0.0265 S33: -0.0137 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 130 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.0483 11.6176 8.5962 REMARK 3 T TENSOR REMARK 3 T11: 0.1217 T22: 0.1304 REMARK 3 T33: 0.1014 T12: -0.0095 REMARK 3 T13: 0.0217 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 2.6427 L22: 6.6464 REMARK 3 L33: 3.0861 L12: 2.4789 REMARK 3 L13: 1.3031 L23: 2.7006 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: 0.1425 S13: 0.2079 REMARK 3 S21: -0.2550 S22: 0.0328 S23: 0.0147 REMARK 3 S31: -0.3277 S32: 0.1707 S33: -0.0337 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9454 3.0628 15.2784 REMARK 3 T TENSOR REMARK 3 T11: 0.0755 T22: 0.1123 REMARK 3 T33: 0.0980 T12: -0.0079 REMARK 3 T13: 0.0110 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.8518 L22: 1.2001 REMARK 3 L33: 0.8842 L12: -0.2839 REMARK 3 L13: -0.0551 L23: 0.2551 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: 0.1156 S13: -0.0516 REMARK 3 S21: 0.0450 S22: 0.0042 S23: 0.1640 REMARK 3 S31: 0.0302 S32: -0.0810 S33: 0.0025 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 201 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1600 -0.3387 30.4546 REMARK 3 T TENSOR REMARK 3 T11: 0.1753 T22: 0.1443 REMARK 3 T33: 0.1247 T12: 0.0350 REMARK 3 T13: 0.0536 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 2.2160 L22: 1.9512 REMARK 3 L33: 3.9921 L12: -0.0812 REMARK 3 L13: 0.1947 L23: 0.5233 REMARK 3 S TENSOR REMARK 3 S11: -0.1975 S12: -0.1675 S13: -0.0601 REMARK 3 S21: 0.5233 S22: 0.1371 S23: 0.2990 REMARK 3 S31: 0.0224 S32: -0.2682 S33: 0.0807 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RI7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087376. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979690 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36838 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.798 REMARK 200 RESOLUTION RANGE LOW (A) : 59.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.61400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4RI6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% W/V PEG4000, 100 MM MES SODIUM, PH REMARK 280 6.5, MICROBATCH UNDER OIL, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.64950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.95000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.32450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.95000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.64950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.32450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 61 -159.65 -128.11 REMARK 500 GLU A 68 112.87 67.94 REMARK 500 THR A 109 -53.70 -121.18 REMARK 500 PHE A 123 33.86 -140.74 REMARK 500 ASP B 61 -162.62 -127.05 REMARK 500 GLU B 68 109.30 74.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RI6 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS HAVE CLARIFIED THAT DISCREPANCIES IN SEQUENCE ARE DUE TO REMARK 999 POLYMORPHISM (RESIDUES 33 AND 86). DBREF 4RI7 A 1 215 UNP A9PHH6 A9PHH6_POPTR 1 215 DBREF 4RI7 B 1 215 UNP A9PHH6 A9PHH6_POPTR 1 215 SEQADV 4RI7 CYS A 13 UNP A9PHH6 SER 13 ENGINEERED MUTATION SEQADV 4RI7 ILE A 33 UNP A9PHH6 VAL 33 CONFLICT SEQADV 4RI7 LYS A 86 UNP A9PHH6 ARG 86 CONFLICT SEQADV 4RI7 CYS B 13 UNP A9PHH6 SER 13 ENGINEERED MUTATION SEQADV 4RI7 ILE B 33 UNP A9PHH6 VAL 33 CONFLICT SEQADV 4RI7 LYS B 86 UNP A9PHH6 ARG 86 CONFLICT SEQRES 1 A 215 MET ALA THR PRO VAL THR ILE TYR GLY PRO PRO LEU CYS SEQRES 2 A 215 THR ALA VAL SER ARG VAL LEU ALA THR LEU ILE GLU LYS SEQRES 3 A 215 ASP VAL PRO PHE HIS LEU ILE PRO ILE ASP LEU SER LYS SEQRES 4 A 215 GLY GLU GLN LYS LYS PRO GLU TYR LEU LYS ILE GLN PRO SEQRES 5 A 215 PHE GLY GLN VAL PRO ALA PHE LYS ASP GLU SER ILE THR SEQRES 6 A 215 LEU PHE GLU SER ARG ALA ILE CYS ARG TYR ILE CYS ASP SEQRES 7 A 215 LYS TYR ALA ASP LYS GLY ASN LYS SER LEU TYR GLY THR SEQRES 8 A 215 ASP ILE LEU SER LYS ALA ASN ILE ASP GLN TRP VAL GLU SEQRES 9 A 215 THR ASP GLY GLN THR PHE GLY PRO PRO SER GLY ASP LEU SEQRES 10 A 215 VAL HIS ASP LEU LEU PHE SER SER VAL PRO VAL ASP GLU SEQRES 11 A 215 ALA LEU ILE LYS LYS ASN VAL ASP LYS LEU ALA LYS VAL SEQRES 12 A 215 LEU ASP ILE TYR GLU GLN LYS LEU GLY GLN THR ARG PHE SEQRES 13 A 215 LEU ALA GLY ASP GLU PHE SER PHE ALA ASP LEU SER HIS SEQRES 14 A 215 LEU PRO ASN GLY ASP TYR LEU VAL ASN SER THR ASP LYS SEQRES 15 A 215 GLY TYR LEU PHE THR SER ARG LYS ASN VAL ASN ARG TRP SEQRES 16 A 215 TRP THR GLU ILE SER ASN ARG GLU SER TRP LYS LYS VAL SEQRES 17 A 215 LEU GLU MET ARG LYS ASN ALA SEQRES 1 B 215 MET ALA THR PRO VAL THR ILE TYR GLY PRO PRO LEU CYS SEQRES 2 B 215 THR ALA VAL SER ARG VAL LEU ALA THR LEU ILE GLU LYS SEQRES 3 B 215 ASP VAL PRO PHE HIS LEU ILE PRO ILE ASP LEU SER LYS SEQRES 4 B 215 GLY GLU GLN LYS LYS PRO GLU TYR LEU LYS ILE GLN PRO SEQRES 5 B 215 PHE GLY GLN VAL PRO ALA PHE LYS ASP GLU SER ILE THR SEQRES 6 B 215 LEU PHE GLU SER ARG ALA ILE CYS ARG TYR ILE CYS ASP SEQRES 7 B 215 LYS TYR ALA ASP LYS GLY ASN LYS SER LEU TYR GLY THR SEQRES 8 B 215 ASP ILE LEU SER LYS ALA ASN ILE ASP GLN TRP VAL GLU SEQRES 9 B 215 THR ASP GLY GLN THR PHE GLY PRO PRO SER GLY ASP LEU SEQRES 10 B 215 VAL HIS ASP LEU LEU PHE SER SER VAL PRO VAL ASP GLU SEQRES 11 B 215 ALA LEU ILE LYS LYS ASN VAL ASP LYS LEU ALA LYS VAL SEQRES 12 B 215 LEU ASP ILE TYR GLU GLN LYS LEU GLY GLN THR ARG PHE SEQRES 13 B 215 LEU ALA GLY ASP GLU PHE SER PHE ALA ASP LEU SER HIS SEQRES 14 B 215 LEU PRO ASN GLY ASP TYR LEU VAL ASN SER THR ASP LYS SEQRES 15 B 215 GLY TYR LEU PHE THR SER ARG LYS ASN VAL ASN ARG TRP SEQRES 16 B 215 TRP THR GLU ILE SER ASN ARG GLU SER TRP LYS LYS VAL SEQRES 17 B 215 LEU GLU MET ARG LYS ASN ALA HET GSH A 500 34 HET GSH B 500 34 HETNAM GSH GLUTATHIONE FORMUL 3 GSH 2(C10 H17 N3 O6 S) FORMUL 5 HOH *458(H2 O) HELIX 1 1 CYS A 13 LYS A 26 1 14 HELIX 2 2 ASP A 36 LYS A 43 5 8 HELIX 3 3 LYS A 44 LYS A 49 1 6 HELIX 4 4 GLU A 68 TYR A 80 1 13 HELIX 5 5 ASP A 92 THR A 109 1 18 HELIX 6 6 PHE A 110 PHE A 123 1 14 HELIX 7 7 ASP A 129 LEU A 151 1 23 HELIX 8 8 SER A 163 HIS A 169 1 7 HELIX 9 9 HIS A 169 THR A 180 1 12 HELIX 10 10 GLY A 183 SER A 188 1 6 HELIX 11 11 ARG A 189 ASN A 201 1 13 HELIX 12 12 ARG A 202 ASN A 214 1 13 HELIX 13 13 CYS B 13 LYS B 26 1 14 HELIX 14 14 ASP B 36 LYS B 43 5 8 HELIX 15 15 LYS B 44 LYS B 49 1 6 HELIX 16 16 GLU B 68 TYR B 80 1 13 HELIX 17 17 ASP B 92 THR B 109 1 18 HELIX 18 18 PHE B 110 PHE B 123 1 14 HELIX 19 19 ASP B 129 LEU B 151 1 23 HELIX 20 20 SER B 163 HIS B 169 1 7 HELIX 21 21 HIS B 169 THR B 180 1 12 HELIX 22 22 GLY B 183 SER B 188 1 6 HELIX 23 23 ARG B 189 ASN B 201 1 13 HELIX 24 24 ARG B 202 ASN B 214 1 13 SHEET 1 A 4 PHE A 30 ILE A 33 0 SHEET 2 A 4 VAL A 5 TYR A 8 1 N ILE A 7 O ILE A 33 SHEET 3 A 4 ALA A 58 LYS A 60 -1 O LYS A 60 N THR A 6 SHEET 4 A 4 THR A 65 PHE A 67 -1 O LEU A 66 N PHE A 59 SHEET 1 B 4 PHE B 30 ILE B 33 0 SHEET 2 B 4 VAL B 5 TYR B 8 1 N ILE B 7 O ILE B 33 SHEET 3 B 4 ALA B 58 LYS B 60 -1 O LYS B 60 N THR B 6 SHEET 4 B 4 THR B 65 PHE B 67 -1 O LEU B 66 N PHE B 59 LINK SG CYS A 13 SG2 GSH A 500 1555 1555 2.14 LINK SG CYS B 13 SG2 GSH B 500 1555 1555 2.13 CISPEP 1 VAL A 56 PRO A 57 0 2.36 CISPEP 2 VAL B 56 PRO B 57 0 1.41 SITE 1 AC1 18 CYS A 13 ALA A 15 LEU A 37 GLN A 42 SITE 2 AC1 18 LYS A 43 GLY A 54 GLN A 55 VAL A 56 SITE 3 AC1 18 PRO A 57 GLU A 68 SER A 69 HOH A 607 SITE 4 AC1 18 HOH A 628 HOH A 673 HOH A 711 HOH A 785 SITE 5 AC1 18 GLN B 108 HOH B 640 SITE 1 AC2 18 GLN A 108 HOH A 608 HOH A 663 CYS B 13 SITE 2 AC2 18 ALA B 15 GLN B 42 LYS B 43 GLY B 54 SITE 3 AC2 18 GLN B 55 VAL B 56 PRO B 57 GLU B 68 SITE 4 AC2 18 SER B 69 HOH B 607 HOH B 651 HOH B 690 SITE 5 AC2 18 HOH B 741 HOH B 798 CRYST1 55.299 60.649 119.900 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018084 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016488 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008340 0.00000