HEADER MEMBRANE PROTEIN 11-OCT-14 4RJW TITLE CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OPRO COMPND MOL_ID: 1; COMPND 2 MOLECULE: PORIN O; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 25-438; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: OPRO, PA3280; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-BARREL, PHOSPHATE CHANNEL, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.VAN DEN BERG REVDAT 2 28-FEB-24 4RJW 1 REMARK SEQADV REVDAT 1 21-OCT-15 4RJW 0 JRNL AUTH N.MODI,S.GANGULY,I.BARCENA-URIBARRI,R.BENZ,B.VAN DEN BERG, JRNL AUTH 2 U.KLEINEKATHOFER JRNL TITL STRUCTURE, DYNAMICS, AND SUBSTRATE SPECIFICITY OF THE OPRO JRNL TITL 2 PORIN FROM PSEUDOMONAS AERUGINOSA. JRNL REF BIOPHYS.J. V. 109 1429 2015 JRNL REFN ISSN 0006-3495 JRNL PMID 26445443 JRNL DOI 10.1016/J.BPJ.2015.07.035 REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 68120 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3449 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.4069 - 4.4401 1.00 2577 155 0.1624 0.1629 REMARK 3 2 4.4401 - 3.5312 1.00 2590 144 0.1363 0.1593 REMARK 3 3 3.5312 - 3.0869 1.00 2570 143 0.1395 0.1393 REMARK 3 4 3.0869 - 2.8055 1.00 2571 147 0.1437 0.1598 REMARK 3 5 2.8055 - 2.6050 1.00 2606 131 0.1483 0.1814 REMARK 3 6 2.6050 - 2.4517 1.00 2613 132 0.1486 0.1694 REMARK 3 7 2.4517 - 2.3291 1.00 2610 116 0.1427 0.1462 REMARK 3 8 2.3291 - 2.2279 1.00 2562 152 0.1490 0.1718 REMARK 3 9 2.2279 - 2.1422 1.00 2589 134 0.1399 0.1473 REMARK 3 10 2.1422 - 2.0684 1.00 2577 143 0.1382 0.1595 REMARK 3 11 2.0684 - 2.0038 1.00 2632 135 0.1370 0.1712 REMARK 3 12 2.0038 - 1.9466 1.00 2591 127 0.1397 0.1686 REMARK 3 13 1.9466 - 1.8954 1.00 2583 149 0.1530 0.1498 REMARK 3 14 1.8954 - 1.8492 1.00 2576 134 0.1554 0.1671 REMARK 3 15 1.8492 - 1.8072 1.00 2564 160 0.1433 0.1706 REMARK 3 16 1.8072 - 1.7687 1.00 2568 137 0.1546 0.1997 REMARK 3 17 1.7687 - 1.7334 1.00 2589 139 0.1611 0.1911 REMARK 3 18 1.7334 - 1.7007 1.00 2627 118 0.1635 0.1905 REMARK 3 19 1.7007 - 1.6703 1.00 2622 119 0.1667 0.1878 REMARK 3 20 1.6703 - 1.6420 1.00 2548 133 0.1727 0.2096 REMARK 3 21 1.6420 - 1.6155 1.00 2615 148 0.1790 0.2096 REMARK 3 22 1.6155 - 1.5907 1.00 2588 153 0.1854 0.2215 REMARK 3 23 1.5907 - 1.5673 1.00 2625 138 0.1927 0.2301 REMARK 3 24 1.5673 - 1.5452 1.00 2552 125 0.1976 0.2261 REMARK 3 25 1.5452 - 1.5200 0.97 2526 137 0.2078 0.2189 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3513 REMARK 3 ANGLE : 1.156 4778 REMARK 3 CHIRALITY : 0.082 499 REMARK 3 PLANARITY : 0.005 635 REMARK 3 DIHEDRAL : 15.110 1267 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID -11:245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2857 13.0820 15.4111 REMARK 3 T TENSOR REMARK 3 T11: 0.0968 T22: 0.1001 REMARK 3 T33: 0.0948 T12: -0.0032 REMARK 3 T13: -0.0105 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.3244 L22: 0.2425 REMARK 3 L33: 0.1714 L12: 0.0144 REMARK 3 L13: -0.1741 L23: -0.1303 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: 0.0705 S13: -0.0657 REMARK 3 S21: -0.0633 S22: -0.0042 S23: 0.0226 REMARK 3 S31: 0.0616 S32: -0.0585 S33: 0.0178 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 246:307 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1489 2.6197 27.8783 REMARK 3 T TENSOR REMARK 3 T11: 0.1306 T22: 0.1193 REMARK 3 T33: 0.1429 T12: -0.0268 REMARK 3 T13: 0.0090 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.7290 L22: 0.7724 REMARK 3 L33: 2.0270 L12: -0.3497 REMARK 3 L13: 0.3345 L23: -0.6380 REMARK 3 S TENSOR REMARK 3 S11: 0.0542 S12: -0.0464 S13: -0.1458 REMARK 3 S21: -0.0392 S22: 0.0232 S23: 0.0838 REMARK 3 S31: 0.2575 S32: -0.0878 S33: -0.0495 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 308:375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4724 13.6298 19.3576 REMARK 3 T TENSOR REMARK 3 T11: 0.1209 T22: 0.1416 REMARK 3 T33: 0.1473 T12: -0.0224 REMARK 3 T13: -0.0140 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.4520 L22: 0.4423 REMARK 3 L33: 1.6263 L12: -0.1944 REMARK 3 L13: 0.1663 L23: -0.3645 REMARK 3 S TENSOR REMARK 3 S11: -0.0015 S12: 0.0573 S13: -0.0410 REMARK 3 S21: -0.0048 S22: 0.0142 S23: 0.0326 REMARK 3 S31: 0.0229 S32: -0.1769 S33: -0.0287 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 376:414 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9772 22.8608 23.3286 REMARK 3 T TENSOR REMARK 3 T11: 0.1315 T22: 0.1369 REMARK 3 T33: 0.1315 T12: -0.0008 REMARK 3 T13: -0.0057 T23: -0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.8960 L22: 0.4645 REMARK 3 L33: 6.4598 L12: 0.5613 REMARK 3 L13: -2.1762 L23: -1.7307 REMARK 3 S TENSOR REMARK 3 S11: -0.0373 S12: 0.1277 S13: -0.0160 REMARK 3 S21: 0.0024 S22: 0.0606 S23: 0.0128 REMARK 3 S31: 0.0055 S32: -0.4213 S33: -0.0281 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087437. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68154 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM SODIUM ACETATE, 0.2 M AMMONIUM REMARK 280 SULPHATE, 10-15% PEG4000, PH 4.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.48550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.10637 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.83333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 43.48550 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 25.10637 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 52.83333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 43.48550 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 25.10637 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.83333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.21273 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 105.66667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 50.21273 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 105.66667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 50.21273 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 105.66667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 86.97100 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 43.48550 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 75.31910 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 804 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 892 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -14 REMARK 465 VAL A -13 REMARK 465 ASN A -12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -11 CG CD NE CZ NH1 NH2 REMARK 470 HIS A -3 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 25 CE NZ REMARK 470 LYS A 71 NZ REMARK 470 LYS A 74 CE NZ REMARK 470 LYS A 258 CG CD CE NZ REMARK 470 LYS A 286 CE NZ REMARK 470 LYS A 296 NZ REMARK 470 LYS A 298 CE NZ REMARK 470 LYS A 316 CE NZ REMARK 470 GLU A 328 CD OE1 OE2 REMARK 470 LYS A 345 CE NZ REMARK 470 LYS A 366 CD CE NZ REMARK 470 LYS A 388 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 644 O HOH A 666 2.04 REMARK 500 O HOH A 666 O HOH A 684 2.04 REMARK 500 O HOH A 666 O HOH A 680 2.07 REMARK 500 O HOH A 666 O HOH A 808 2.08 REMARK 500 O VAL A 128 O HOH A 1091 2.09 REMARK 500 O HOH A 1014 O HOH A 1080 2.09 REMARK 500 O HOH A 696 O HOH A 1078 2.10 REMARK 500 OD1 ASP A 43 O HOH A 696 2.14 REMARK 500 O HOH A 666 O HOH A 781 2.14 REMARK 500 O HOH A 1027 O HOH A 1082 2.16 REMARK 500 O HOH A 1009 O HOH A 1010 2.17 REMARK 500 O HOH A 890 O HOH A 900 2.17 REMARK 500 O HOH A 1083 O HOH A 1084 2.18 REMARK 500 OD2 ASP A 354 O HOH A 755 2.19 REMARK 500 O HOH A 890 O HOH A 938 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1079 O HOH A 1090 5555 2.15 REMARK 500 O HOH A 809 O HOH A 845 8544 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 71 -48.33 70.82 REMARK 500 ASN A 104 125.98 -36.65 REMARK 500 ALA A 140 62.98 -163.83 REMARK 500 ASN A 144 29.13 -140.38 REMARK 500 MET A 161 5.13 -155.51 REMARK 500 HIS A 194 48.86 -146.92 REMARK 500 ASN A 198 79.84 -152.95 REMARK 500 ALA A 230 109.38 -164.94 REMARK 500 ASN A 242 75.18 -112.02 REMARK 500 ASP A 288 -77.36 -106.72 REMARK 500 ALA A 320 66.85 38.90 REMARK 500 ASP A 323 -138.96 -143.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E A 501 REMARK 610 C8E A 502 REMARK 610 C8E A 503 REMARK 610 C8E A 504 REMARK 610 C8E A 505 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RJX RELATED DB: PDB DBREF 4RJW A 1 414 UNP P32977 PORO_PSEAE 25 438 SEQADV 4RJW ALA A -14 UNP P32977 EXPRESSION TAG SEQADV 4RJW VAL A -13 UNP P32977 EXPRESSION TAG SEQADV 4RJW ASN A -12 UNP P32977 EXPRESSION TAG SEQADV 4RJW ARG A -11 UNP P32977 EXPRESSION TAG SEQADV 4RJW LEU A -10 UNP P32977 EXPRESSION TAG SEQADV 4RJW GLN A -9 UNP P32977 EXPRESSION TAG SEQADV 4RJW HIS A -8 UNP P32977 EXPRESSION TAG SEQADV 4RJW HIS A -7 UNP P32977 EXPRESSION TAG SEQADV 4RJW HIS A -6 UNP P32977 EXPRESSION TAG SEQADV 4RJW HIS A -5 UNP P32977 EXPRESSION TAG SEQADV 4RJW HIS A -4 UNP P32977 EXPRESSION TAG SEQADV 4RJW HIS A -3 UNP P32977 EXPRESSION TAG SEQADV 4RJW HIS A -2 UNP P32977 EXPRESSION TAG SEQADV 4RJW LEU A -1 UNP P32977 EXPRESSION TAG SEQADV 4RJW GLU A 0 UNP P32977 EXPRESSION TAG SEQRES 1 A 429 ALA VAL ASN ARG LEU GLN HIS HIS HIS HIS HIS HIS HIS SEQRES 2 A 429 LEU GLU GLY THR VAL THR THR ASP GLY ALA ASP ILE VAL SEQRES 3 A 429 ILE LYS THR LYS GLY GLY LEU GLU VAL ALA THR THR ASP SEQRES 4 A 429 LYS GLU PHE SER PHE LYS LEU GLY GLY ARG LEU GLN ALA SEQRES 5 A 429 ASP TYR SER ARG PHE ASP GLY PHE TYR THR LYS ASN GLY SEQRES 6 A 429 ASN THR ALA ASP ALA ALA TYR PHE ARG ARG ALA PHE ILE SEQRES 7 A 429 GLU LEU GLY GLY THR ALA TYR LYS ASP TRP LYS TYR GLN SEQRES 8 A 429 ILE ASN PHE ASP LEU SER HIS ASN THR GLY SER SER ASP SEQRES 9 A 429 ASN GLY TYR PHE ASP GLU ALA SER VAL THR TYR THR GLY SEQRES 10 A 429 PHE ASN PRO VAL ASN LEU LYS PHE GLY ARG PHE ASP PRO SEQRES 11 A 429 ASP PHE GLY LEU GLU LYS ALA THR SER SER LYS TRP VAL SEQRES 12 A 429 THR ALA PRO GLU ARG ASN ALA ALA TYR GLU LEU ALA ASP SEQRES 13 A 429 TRP ILE ASN THR HIS GLN ASP GLY MET GLY ALA GLN VAL SEQRES 14 A 429 ASN SER THR LEU ALA ASP MET ALA TYR LEU SER ALA GLY SEQRES 15 A 429 VAL SER ALA LYS ASP ALA ASP ASP SER ASP GLY ASP SER SEQRES 16 A 429 VAL LYS GLN PHE ASN PHE ARG GLY VAL PHE ALA PRO MET SEQRES 17 A 429 HIS GLU ALA GLY ASN VAL LEU HIS VAL GLY VAL ASN TYR SEQRES 18 A 429 ALA TYR ARG ASP LEU ASP ASP THR ALA PHE ASP SER ARG SEQRES 19 A 429 ILE ARG PRO ARG LEU GLY MET ARG GLY ILE ALA THR SER SEQRES 20 A 429 GLY GLY ASN ASP ALA GLY ASP ASN GLY ASN ARG ALA THR SEQRES 21 A 429 PHE GLY GLY VAL SER ASN SER PRO ALA GLY SER TYR LYS SEQRES 22 A 429 ASP ASP SER VAL TRP GLY LEU GLU GLY ALA TRP ALA MET SEQRES 23 A 429 GLY PRO PHE SER ALA GLN ALA GLU TYR LEU ALA ARG LYS SEQRES 24 A 429 LEU LYS ALA ASP ASP ASN ALA TYR LYS ASP ILE LYS ALA SEQRES 25 A 429 LYS GLY TYR TYR ALA GLN LEU ALA TYR THR LEU THR GLY SEQRES 26 A 429 GLU SER ARG GLN TYR LYS LEU GLU GLY ALA LYS PHE ASP SEQRES 27 A 429 SER VAL LYS PRO GLU ASN LYS GLU ILE GLY ALA TRP GLU SEQRES 28 A 429 VAL PHE TYR ARG TYR ASP ASN ILE LYS VAL GLU ASP ASP SEQRES 29 A 429 ASN VAL VAL ALA ASP THR ALA THR ARG GLU VAL GLY ASP SEQRES 30 A 429 THR LYS ALA LYS ALA HIS ASN LEU GLY VAL ASN TRP TYR SEQRES 31 A 429 VAL ASN ASP ALA VAL LYS ILE SER ALA ALA TYR VAL LYS SEQRES 32 A 429 ALA LYS THR ASP LYS ILE THR ASN ASN ASN GLY ASP ASP SEQRES 33 A 429 ASP GLY ASP GLY PHE VAL THR ARG LEU GLN TYR VAL PHE HET C8E A 501 7 HET C8E A 502 19 HET C8E A 503 7 HET C8E A 504 8 HET C8E A 505 6 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE FORMUL 2 C8E 5(C16 H34 O5) FORMUL 7 HOH *492(H2 O) HELIX 1 1 GLY A 44 THR A 47 5 4 HELIX 2 2 GLY A 118 THR A 123 1 6 HELIX 3 3 ALA A 136 THR A 145 5 10 HELIX 4 4 MET A 226 ALA A 230 5 5 HELIX 5 5 ALA A 237 GLY A 241 5 5 SHEET 1 A 5 ILE A 10 LYS A 13 0 SHEET 2 A 5 LEU A 18 THR A 22 -1 O ALA A 21 N VAL A 11 SHEET 3 A 5 SER A 28 PHE A 42 -1 O PHE A 29 N VAL A 20 SHEET 4 A 5 ALA A 53 ALA A 69 -1 O TYR A 57 N ASP A 38 SHEET 5 A 5 GLY A 234 ASN A 235 -1 O ASN A 235 N ALA A 56 SHEET 1 B19 ILE A 10 LYS A 13 0 SHEET 2 B19 LEU A 18 THR A 22 -1 O ALA A 21 N VAL A 11 SHEET 3 B19 SER A 28 PHE A 42 -1 O PHE A 29 N VAL A 20 SHEET 4 B19 ASP A 402 PHE A 414 -1 O LEU A 410 N ALA A 37 SHEET 5 B19 VAL A 380 ASP A 392 -1 N VAL A 387 O GLY A 405 SHEET 6 B19 THR A 363 TYR A 375 -1 N TRP A 374 O ILE A 382 SHEET 7 B19 ALA A 334 ASP A 348 -1 N ILE A 344 O ALA A 365 SHEET 8 B19 ILE A 295 THR A 307 -1 N LYS A 296 O GLU A 347 SHEET 9 B19 PHE A 274 ALA A 287 -1 N GLN A 277 O GLN A 303 SHEET 10 B19 TYR A 257 MET A 271 -1 N LYS A 258 O LYS A 286 SHEET 11 B19 ASN A 198 ASP A 210 -1 N ASN A 205 O GLY A 264 SHEET 12 B19 SER A 180 GLU A 195 -1 N PHE A 190 O VAL A 202 SHEET 13 B19 ALA A 162 ASP A 174 -1 N LYS A 171 O VAL A 181 SHEET 14 B19 MET A 150 LEU A 158 -1 N MET A 150 O ALA A 170 SHEET 15 B19 ASN A 107 ARG A 112 -1 N LYS A 109 O GLN A 153 SHEET 16 B19 PHE A 93 TYR A 100 -1 N ALA A 96 O ARG A 112 SHEET 17 B19 TRP A 73 ASP A 80 -1 N LYS A 74 O THR A 99 SHEET 18 B19 ALA A 53 ALA A 69 -1 N LEU A 65 O ILE A 77 SHEET 19 B19 GLY A 234 ASN A 235 -1 O ASN A 235 N ALA A 56 SHEET 1 C 2 TYR A 315 LYS A 316 0 SHEET 2 C 2 LYS A 321 PHE A 322 -1 O LYS A 321 N LYS A 316 CISPEP 1 ASN A 104 PRO A 105 0 12.43 SITE 1 AC1 2 TYR A 100 C8E A 502 SITE 1 AC2 11 ALA A 37 TYR A 39 PHE A 110 GLY A 111 SITE 2 AC2 11 MET A 150 GLY A 151 ILE A 382 THR A 408 SITE 3 AC2 11 LEU A 410 C8E A 501 HOH A1016 SITE 1 AC3 2 GLU A 266 GLY A 267 SITE 1 AC4 2 LEU A 200 ALA A 278 SITE 1 AC5 2 ALA A 152 ALA A 166 CRYST1 86.971 86.971 158.500 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011498 0.006638 0.000000 0.00000 SCALE2 0.000000 0.013277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006309 0.00000