data_4RK5 # _entry.id 4RK5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code RCSB RCSB087446 PDB 4RK5 WWPDB D_1000087446 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4RK3 'LacI family transcriptional regulator from Lactobacillus casei with bound glycerol' unspecified PDB 4RK4 'LacI family transcriptional regulator from Lactobacillus casei with bound glucose' unspecified TargetTrack EFI-512911 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RK5 _pdbx_database_status.recvd_initial_deposition_date 2014-10-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Patskovsky, Y.' 1 'Toro, R.' 2 'Bhosle, R.' 3 'Al Obaidi, N.' 4 'Chamala, S.' 5 'Attonito, J.D.' 6 'Scott Glenn, A.' 7 'Chowdhury, S.' 8 'Lafleur, J.' 9 'Siedel, R.D.' 10 'Hillerich, B.' 11 'Love, J.' 12 'Whalen, K.L.' 13 'Gerlt, J.A.' 14 'Almo, S.C.' 15 'Enzyme Function Initiative (EFI)' 16 # _citation.id primary _citation.title 'Crystal Structure of LacI Transcriptional Regulator Lsei_2103 from Lactobacillus casei, Target EFI-512911' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Patskovsky, Y.' 1 ? primary 'Toro, R.' 2 ? primary 'Bhosle, R.' 3 ? primary 'Al Obaidi, N.' 4 ? primary 'Chamala, S.' 5 ? primary 'Scott Glenn, A.' 6 ? primary 'Attonito, J.D.' 7 ? primary 'Chowdhury, S.' 8 ? primary 'Lafleur, J.' 9 ? primary 'Siedel, R.D.' 10 ? primary 'Hillerich, B.' 11 ? primary 'Love, J.' 12 ? primary 'Whalen, K.L.' 13 ? primary 'Gerlt, J.A.' 14 ? primary 'Almo, S.C.' 15 ? # _cell.entry_id 4RK5 _cell.length_a 108.754 _cell.length_b 108.754 _cell.length_c 125.763 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RK5 _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, LacI family' 30912.123 1 ? ? 'UNP residues 54-333' ? 2 branched man 'beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 5 water nat water 18.015 273 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name sucrose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;QS(MSE)LRAQATGNIGVLVSRVTNPFFAGLFDAIERELHAHGYQV(MSE)ITQTYDDPEAEERFLKQLKSRELDGVILA SVEAPDRV(MSE)AVAKAFPGRVVVVNADVQIPGATSLVLPHYQATRDALDYLFNQGHRRFAYVSGGTISGAHHGQSRTQ AFLDF(MSE)QAHQLLVAQDLLFGQIHTAKEGQAVGKQLASLAPNVRPDAVFTNSDEVAVGVIDSLLAADVKVPDDIAV (MSE)GYDDQPFAPFAKIPLTTVHQPVAS(MSE)AAAATHELLKGLGRQVAQDTQPTLHLSLKIRQSA ; _entity_poly.pdbx_seq_one_letter_code_can ;QSMLRAQATGNIGVLVSRVTNPFFAGLFDAIERELHAHGYQVMITQTYDDPEAEERFLKQLKSRELDGVILASVEAPDRV MAVAKAFPGRVVVVNADVQIPGATSLVLPHYQATRDALDYLFNQGHRRFAYVSGGTISGAHHGQSRTQAFLDFMQAHQLL VAQDLLFGQIHTAKEGQAVGKQLASLAPNVRPDAVFTNSDEVAVGVIDSLLAADVKVPDDIAVMGYDDQPFAPFAKIPLT TVHQPVASMAAAATHELLKGLGRQVAQDTQPTLHLSLKIRQSA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier EFI-512911 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 SER n 1 3 MSE n 1 4 LEU n 1 5 ARG n 1 6 ALA n 1 7 GLN n 1 8 ALA n 1 9 THR n 1 10 GLY n 1 11 ASN n 1 12 ILE n 1 13 GLY n 1 14 VAL n 1 15 LEU n 1 16 VAL n 1 17 SER n 1 18 ARG n 1 19 VAL n 1 20 THR n 1 21 ASN n 1 22 PRO n 1 23 PHE n 1 24 PHE n 1 25 ALA n 1 26 GLY n 1 27 LEU n 1 28 PHE n 1 29 ASP n 1 30 ALA n 1 31 ILE n 1 32 GLU n 1 33 ARG n 1 34 GLU n 1 35 LEU n 1 36 HIS n 1 37 ALA n 1 38 HIS n 1 39 GLY n 1 40 TYR n 1 41 GLN n 1 42 VAL n 1 43 MSE n 1 44 ILE n 1 45 THR n 1 46 GLN n 1 47 THR n 1 48 TYR n 1 49 ASP n 1 50 ASP n 1 51 PRO n 1 52 GLU n 1 53 ALA n 1 54 GLU n 1 55 GLU n 1 56 ARG n 1 57 PHE n 1 58 LEU n 1 59 LYS n 1 60 GLN n 1 61 LEU n 1 62 LYS n 1 63 SER n 1 64 ARG n 1 65 GLU n 1 66 LEU n 1 67 ASP n 1 68 GLY n 1 69 VAL n 1 70 ILE n 1 71 LEU n 1 72 ALA n 1 73 SER n 1 74 VAL n 1 75 GLU n 1 76 ALA n 1 77 PRO n 1 78 ASP n 1 79 ARG n 1 80 VAL n 1 81 MSE n 1 82 ALA n 1 83 VAL n 1 84 ALA n 1 85 LYS n 1 86 ALA n 1 87 PHE n 1 88 PRO n 1 89 GLY n 1 90 ARG n 1 91 VAL n 1 92 VAL n 1 93 VAL n 1 94 VAL n 1 95 ASN n 1 96 ALA n 1 97 ASP n 1 98 VAL n 1 99 GLN n 1 100 ILE n 1 101 PRO n 1 102 GLY n 1 103 ALA n 1 104 THR n 1 105 SER n 1 106 LEU n 1 107 VAL n 1 108 LEU n 1 109 PRO n 1 110 HIS n 1 111 TYR n 1 112 GLN n 1 113 ALA n 1 114 THR n 1 115 ARG n 1 116 ASP n 1 117 ALA n 1 118 LEU n 1 119 ASP n 1 120 TYR n 1 121 LEU n 1 122 PHE n 1 123 ASN n 1 124 GLN n 1 125 GLY n 1 126 HIS n 1 127 ARG n 1 128 ARG n 1 129 PHE n 1 130 ALA n 1 131 TYR n 1 132 VAL n 1 133 SER n 1 134 GLY n 1 135 GLY n 1 136 THR n 1 137 ILE n 1 138 SER n 1 139 GLY n 1 140 ALA n 1 141 HIS n 1 142 HIS n 1 143 GLY n 1 144 GLN n 1 145 SER n 1 146 ARG n 1 147 THR n 1 148 GLN n 1 149 ALA n 1 150 PHE n 1 151 LEU n 1 152 ASP n 1 153 PHE n 1 154 MSE n 1 155 GLN n 1 156 ALA n 1 157 HIS n 1 158 GLN n 1 159 LEU n 1 160 LEU n 1 161 VAL n 1 162 ALA n 1 163 GLN n 1 164 ASP n 1 165 LEU n 1 166 LEU n 1 167 PHE n 1 168 GLY n 1 169 GLN n 1 170 ILE n 1 171 HIS n 1 172 THR n 1 173 ALA n 1 174 LYS n 1 175 GLU n 1 176 GLY n 1 177 GLN n 1 178 ALA n 1 179 VAL n 1 180 GLY n 1 181 LYS n 1 182 GLN n 1 183 LEU n 1 184 ALA n 1 185 SER n 1 186 LEU n 1 187 ALA n 1 188 PRO n 1 189 ASN n 1 190 VAL n 1 191 ARG n 1 192 PRO n 1 193 ASP n 1 194 ALA n 1 195 VAL n 1 196 PHE n 1 197 THR n 1 198 ASN n 1 199 SER n 1 200 ASP n 1 201 GLU n 1 202 VAL n 1 203 ALA n 1 204 VAL n 1 205 GLY n 1 206 VAL n 1 207 ILE n 1 208 ASP n 1 209 SER n 1 210 LEU n 1 211 LEU n 1 212 ALA n 1 213 ALA n 1 214 ASP n 1 215 VAL n 1 216 LYS n 1 217 VAL n 1 218 PRO n 1 219 ASP n 1 220 ASP n 1 221 ILE n 1 222 ALA n 1 223 VAL n 1 224 MSE n 1 225 GLY n 1 226 TYR n 1 227 ASP n 1 228 ASP n 1 229 GLN n 1 230 PRO n 1 231 PHE n 1 232 ALA n 1 233 PRO n 1 234 PHE n 1 235 ALA n 1 236 LYS n 1 237 ILE n 1 238 PRO n 1 239 LEU n 1 240 THR n 1 241 THR n 1 242 VAL n 1 243 HIS n 1 244 GLN n 1 245 PRO n 1 246 VAL n 1 247 ALA n 1 248 SER n 1 249 MSE n 1 250 ALA n 1 251 ALA n 1 252 ALA n 1 253 ALA n 1 254 THR n 1 255 HIS n 1 256 GLU n 1 257 LEU n 1 258 LEU n 1 259 LYS n 1 260 GLY n 1 261 LEU n 1 262 GLY n 1 263 ARG n 1 264 GLN n 1 265 VAL n 1 266 ALA n 1 267 GLN n 1 268 ASP n 1 269 THR n 1 270 GLN n 1 271 PRO n 1 272 THR n 1 273 LEU n 1 274 HIS n 1 275 LEU n 1 276 SER n 1 277 LEU n 1 278 LYS n 1 279 ILE n 1 280 ARG n 1 281 GLN n 1 282 SER n 1 283 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene LSEI_2103 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactobacillus casei ATCC 334' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 321967 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q036L9_LACC3 _struct_ref.pdbx_db_accession Q036L9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LRAQATGNIGVLVSRVTNPFFAGLFDAIERELHAHGYQVMITQTYDDPEAEERFLKQLKSRELDGVILASVEAPDRVMAV AKAFPGRVVVVNADVQIPGATSLVLPHYQATRDALDYLFNQGHRRFAYVSGGTISGAHHGQSRTQAFLDFMQAHQLLVAQ DLLFGQIHTAKEGQAVGKQLASLAPNVRPDAVFTNSDEVAVGVIDSLLAADVKVPDDIAVMGYDDQPFAPFAKIPLTTVH QPVASMAAAATHELLKGLGRQVAQDTQPTLHLSLKIRQSA ; _struct_ref.pdbx_align_begin 54 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4RK5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 283 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q036L9 _struct_ref_seq.db_align_beg 54 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 333 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 54 _struct_ref_seq.pdbx_auth_seq_align_end 333 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RK5 GLN A 1 ? UNP Q036L9 ? ? 'expression tag' 51 1 1 4RK5 SER A 2 ? UNP Q036L9 ? ? 'expression tag' 52 2 1 4RK5 MSE A 3 ? UNP Q036L9 ? ? 'expression tag' 53 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose ? 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose ? 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4RK5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_percent_sol 46.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;protein in 10 mM Bis-Tris, 500 mM sodium chloride, 10% glycerol, 5 mM DTT, TEV protease (1:100 ratio), reservoir: 0.16 M calcium acetate, 0.08 M sodium cacodylate, pH 6.5, 14.4% PEG8000, 20% glycerol, cryoprotectant = reservoir + 100 mM sucrose, VAPOR DIFFUSION, SITTING DROP, temperature 294K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2014-09-25 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.075 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength 1.075 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 4RK5 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.350 _reflns.number_obs 62512 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_netI_over_sigmaI 39.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.35 _reflns_shell.d_res_low 1.37 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.880 _reflns_shell.pdbx_Rsym_value 0.880 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 7.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4RK5 _refine.ls_number_reflns_obs 60647 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.1 _refine.ls_d_res_high 1.35 _refine.ls_percent_reflns_obs 99.94 _refine.ls_R_factor_obs 0.11003 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.10905 _refine.ls_R_factor_R_free 0.14093 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.0 _refine.ls_number_reflns_R_free 1865 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.985 _refine.correlation_coeff_Fo_to_Fc_free 0.979 _refine.B_iso_mean 28.146 _refine.aniso_B[1][1] -0.02 _refine.aniso_B[2][2] -0.02 _refine.aniso_B[3][3] 0.05 _refine.aniso_B[1][2] -0.01 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. SIDE CHAIN ATOMS (CG, CD1, CD2, CE1, CE2, CZ) OF RESIDUE A PHE 281 ARE ON A SPECIAL POSITION. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.038 _refine.pdbx_overall_ESU_R_Free 0.039 _refine.overall_SU_ML 0.025 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.397 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2087 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 273 _refine_hist.number_atoms_total 2388 _refine_hist.d_res_high 1.35 _refine_hist.d_res_low 44.1 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.020 0.019 ? 2271 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.002 0.020 ? 2182 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.929 1.966 ? 3117 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.648 3.000 ? 5016 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.893 5.000 ? 305 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.693 24.112 ? 107 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 12.436 15.000 ? 342 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13.154 15.000 ? 15 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.121 0.200 ? 363 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.009 0.021 ? 2647 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.006 0.020 ? 540 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 6.190 3.184 ? 1135 ? 'X-RAY DIFFRACTION' r_mcbond_other 6.189 3.183 ? 1133 ? 'X-RAY DIFFRACTION' r_mcangle_it 6.307 5.377 ? 1425 ? 'X-RAY DIFFRACTION' r_mcangle_other 6.305 5.376 ? 1426 ? 'X-RAY DIFFRACTION' r_scbond_it 10.583 3.943 ? 1130 ? 'X-RAY DIFFRACTION' r_scbond_other 10.580 3.945 ? 1131 ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other 9.969 6.306 ? 1672 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 8.714 12.979 ? 2713 ? 'X-RAY DIFFRACTION' r_long_range_B_other 8.713 12.980 ? 2714 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 6.000 3.000 ? 4442 ? 'X-RAY DIFFRACTION' r_sphericity_free 34.803 5.000 ? 71 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 20.354 5.000 ? 4596 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.35 _refine_ls_shell.d_res_low 1.386 _refine_ls_shell.number_reflns_R_work 4406 _refine_ls_shell.R_factor_R_work 0.197 _refine_ls_shell.percent_reflns_obs 99.54 _refine_ls_shell.R_factor_R_free 0.237 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 129 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4RK5 _struct.title 'Crystal structure of LacI family transcriptional regulator from Lactobacillus casei, Target EFI-512911, with bound sucrose' _struct.pdbx_descriptor 'Transcriptional regulator, LacI family' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RK5 _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR' _struct_keywords.text ;sugar binding, transcription regulation, Enzyme Function Initiative, EFI, structural genomics, transcriptional factor, sucrose, TRANSCRIPTION REGULATOR ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 21 ? HIS A 38 ? ASN A 71 HIS A 88 1 ? 18 HELX_P HELX_P2 2 ASP A 50 ? SER A 63 ? ASP A 100 SER A 113 1 ? 14 HELX_P HELX_P3 3 ALA A 76 ? PHE A 87 ? ALA A 126 PHE A 137 1 ? 12 HELX_P HELX_P4 4 PRO A 109 ? GLN A 124 ? PRO A 159 GLN A 174 1 ? 16 HELX_P HELX_P5 5 GLY A 143 ? HIS A 157 ? GLY A 193 HIS A 207 1 ? 15 HELX_P HELX_P6 6 ALA A 162 ? ASP A 164 ? ALA A 212 ASP A 214 5 ? 3 HELX_P HELX_P7 7 THR A 172 ? SER A 185 ? THR A 222 SER A 235 1 ? 14 HELX_P HELX_P8 8 SER A 199 ? ALA A 213 ? SER A 249 ALA A 263 1 ? 15 HELX_P HELX_P9 9 PHE A 231 ? ALA A 235 ? PHE A 281 ALA A 285 5 ? 5 HELX_P HELX_P10 10 PRO A 245 ? LEU A 261 ? PRO A 295 LEU A 311 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A VAL 42 C ? ? ? 1_555 A MSE 43 N A ? A VAL 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale2 covale both ? A VAL 42 C ? ? ? 1_555 A MSE 43 N B ? A VAL 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale3 covale both ? A MSE 43 C A ? ? 1_555 A ILE 44 N ? ? A MSE 93 A ILE 94 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale4 covale both ? A MSE 43 C B ? ? 1_555 A ILE 44 N ? ? A MSE 93 A ILE 94 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale5 covale both ? A VAL 80 C ? ? ? 1_555 A MSE 81 N ? ? A VAL 130 A MSE 131 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A MSE 81 C ? ? ? 1_555 A ALA 82 N ? ? A MSE 131 A ALA 132 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale7 covale both ? A PHE 153 C ? ? ? 1_555 A MSE 154 N ? ? A PHE 203 A MSE 204 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale8 covale both ? A MSE 154 C ? ? ? 1_555 A GLN 155 N ? ? A MSE 204 A GLN 205 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A VAL 223 C ? ? ? 1_555 A MSE 224 N ? ? A VAL 273 A MSE 274 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale10 covale both ? A MSE 224 C ? ? ? 1_555 A GLY 225 N ? ? A MSE 274 A GLY 275 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale11 covale both ? A SER 248 C ? ? ? 1_555 A MSE 249 N ? ? A SER 298 A MSE 299 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale12 covale both ? A MSE 249 C ? ? ? 1_555 A ALA 250 N ? ? A MSE 299 A ALA 300 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale13 covale both ? B GLC . C1 ? ? ? 1_555 B FRU . O2 ? ? B GLC 1 B FRU 2 1_555 ? ? ? ? ? ? ? 1.448 sing ? metalc1 metalc ? ? A ASP 219 O ? ? ? 1_555 C NA . NA ? ? A ASP 269 A NA 401 1_555 ? ? ? ? ? ? ? 2.502 ? ? metalc2 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 401 A HOH 537 1_555 ? ? ? ? ? ? ? 2.472 ? ? metalc3 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 401 A HOH 568 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc4 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 401 A HOH 682 1_555 ? ? ? ? ? ? ? 2.478 ? ? metalc5 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 401 A HOH 719 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc6 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 401 A HOH 720 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc7 metalc ? ? C NA . NA ? ? ? 1_555 E HOH . O ? ? A NA 401 A HOH 745 1_555 ? ? ? ? ? ? ? 2.390 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 217 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 267 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 218 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 268 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 8.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 41 ? GLN A 46 ? GLN A 91 GLN A 96 A 2 ASN A 11 ? VAL A 16 ? ASN A 61 VAL A 66 A 3 GLY A 68 ? LEU A 71 ? GLY A 118 LEU A 121 A 4 VAL A 91 ? VAL A 94 ? VAL A 141 VAL A 144 A 5 THR A 104 ? LEU A 106 ? THR A 154 LEU A 156 B 1 LEU A 166 ? PHE A 167 ? LEU A 216 PHE A 217 B 2 PHE A 129 ? VAL A 132 ? PHE A 179 VAL A 182 B 3 ALA A 194 ? PHE A 196 ? ALA A 244 PHE A 246 B 4 ALA A 222 ? MSE A 224 ? ALA A 272 MSE A 274 C 1 THR A 241 ? HIS A 243 ? THR A 291 HIS A 293 C 2 SER A 276 ? LYS A 278 ? SER A 326 LYS A 328 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 41 ? O GLN A 91 N ILE A 12 ? N ILE A 62 A 2 3 N GLY A 13 ? N GLY A 63 O ILE A 70 ? O ILE A 120 A 3 4 N LEU A 71 ? N LEU A 121 O VAL A 94 ? O VAL A 144 A 4 5 N VAL A 93 ? N VAL A 143 O LEU A 106 ? O LEU A 156 B 1 2 O PHE A 167 ? O PHE A 217 N TYR A 131 ? N TYR A 181 B 2 3 N VAL A 132 ? N VAL A 182 O PHE A 196 ? O PHE A 246 B 3 4 N VAL A 195 ? N VAL A 245 O MSE A 224 ? O MSE A 274 C 1 2 N HIS A 243 ? N HIS A 293 O SER A 276 ? O SER A 326 # _database_PDB_matrix.entry_id 4RK5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4RK5 _atom_sites.fract_transf_matrix[1][1] 0.009195 _atom_sites.fract_transf_matrix[1][2] 0.005309 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010618 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007951 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 51 ? ? ? A . n A 1 2 SER 2 52 ? ? ? A . n A 1 3 MSE 3 53 ? ? ? A . n A 1 4 LEU 4 54 ? ? ? A . n A 1 5 ARG 5 55 ? ? ? A . n A 1 6 ALA 6 56 ? ? ? A . n A 1 7 GLN 7 57 ? ? ? A . n A 1 8 ALA 8 58 ? ? ? A . n A 1 9 THR 9 59 59 THR THR A . n A 1 10 GLY 10 60 60 GLY GLY A . n A 1 11 ASN 11 61 61 ASN ASN A . n A 1 12 ILE 12 62 62 ILE ILE A . n A 1 13 GLY 13 63 63 GLY GLY A . n A 1 14 VAL 14 64 64 VAL VAL A . n A 1 15 LEU 15 65 65 LEU LEU A . n A 1 16 VAL 16 66 66 VAL VAL A . n A 1 17 SER 17 67 67 SER SER A . n A 1 18 ARG 18 68 68 ARG ARG A . n A 1 19 VAL 19 69 69 VAL VAL A . n A 1 20 THR 20 70 70 THR THR A . n A 1 21 ASN 21 71 71 ASN ASN A . n A 1 22 PRO 22 72 72 PRO PRO A . n A 1 23 PHE 23 73 73 PHE PHE A . n A 1 24 PHE 24 74 74 PHE PHE A . n A 1 25 ALA 25 75 75 ALA ALA A . n A 1 26 GLY 26 76 76 GLY GLY A . n A 1 27 LEU 27 77 77 LEU LEU A . n A 1 28 PHE 28 78 78 PHE PHE A . n A 1 29 ASP 29 79 79 ASP ASP A . n A 1 30 ALA 30 80 80 ALA ALA A . n A 1 31 ILE 31 81 81 ILE ILE A . n A 1 32 GLU 32 82 82 GLU GLU A . n A 1 33 ARG 33 83 83 ARG ARG A . n A 1 34 GLU 34 84 84 GLU GLU A . n A 1 35 LEU 35 85 85 LEU LEU A . n A 1 36 HIS 36 86 86 HIS HIS A . n A 1 37 ALA 37 87 87 ALA ALA A . n A 1 38 HIS 38 88 88 HIS HIS A . n A 1 39 GLY 39 89 89 GLY GLY A . n A 1 40 TYR 40 90 90 TYR TYR A . n A 1 41 GLN 41 91 91 GLN GLN A . n A 1 42 VAL 42 92 92 VAL VAL A . n A 1 43 MSE 43 93 93 MSE MSE A . n A 1 44 ILE 44 94 94 ILE ILE A . n A 1 45 THR 45 95 95 THR THR A . n A 1 46 GLN 46 96 96 GLN GLN A . n A 1 47 THR 47 97 97 THR THR A . n A 1 48 TYR 48 98 98 TYR TYR A . n A 1 49 ASP 49 99 99 ASP ASP A . n A 1 50 ASP 50 100 100 ASP ASP A . n A 1 51 PRO 51 101 101 PRO PRO A . n A 1 52 GLU 52 102 102 GLU GLU A . n A 1 53 ALA 53 103 103 ALA ALA A . n A 1 54 GLU 54 104 104 GLU GLU A . n A 1 55 GLU 55 105 105 GLU GLU A . n A 1 56 ARG 56 106 106 ARG ARG A . n A 1 57 PHE 57 107 107 PHE PHE A . n A 1 58 LEU 58 108 108 LEU LEU A . n A 1 59 LYS 59 109 109 LYS LYS A . n A 1 60 GLN 60 110 110 GLN GLN A . n A 1 61 LEU 61 111 111 LEU LEU A . n A 1 62 LYS 62 112 112 LYS LYS A . n A 1 63 SER 63 113 113 SER SER A . n A 1 64 ARG 64 114 114 ARG ARG A . n A 1 65 GLU 65 115 115 GLU GLU A . n A 1 66 LEU 66 116 116 LEU LEU A . n A 1 67 ASP 67 117 117 ASP ASP A . n A 1 68 GLY 68 118 118 GLY GLY A . n A 1 69 VAL 69 119 119 VAL VAL A . n A 1 70 ILE 70 120 120 ILE ILE A . n A 1 71 LEU 71 121 121 LEU LEU A . n A 1 72 ALA 72 122 122 ALA ALA A . n A 1 73 SER 73 123 123 SER SER A . n A 1 74 VAL 74 124 124 VAL VAL A . n A 1 75 GLU 75 125 125 GLU GLU A . n A 1 76 ALA 76 126 126 ALA ALA A . n A 1 77 PRO 77 127 127 PRO PRO A . n A 1 78 ASP 78 128 128 ASP ASP A . n A 1 79 ARG 79 129 129 ARG ARG A . n A 1 80 VAL 80 130 130 VAL VAL A . n A 1 81 MSE 81 131 131 MSE MSE A . n A 1 82 ALA 82 132 132 ALA ALA A . n A 1 83 VAL 83 133 133 VAL VAL A . n A 1 84 ALA 84 134 134 ALA ALA A . n A 1 85 LYS 85 135 135 LYS LYS A . n A 1 86 ALA 86 136 136 ALA ALA A . n A 1 87 PHE 87 137 137 PHE PHE A . n A 1 88 PRO 88 138 138 PRO PRO A . n A 1 89 GLY 89 139 139 GLY GLY A . n A 1 90 ARG 90 140 140 ARG ARG A . n A 1 91 VAL 91 141 141 VAL VAL A . n A 1 92 VAL 92 142 142 VAL VAL A . n A 1 93 VAL 93 143 143 VAL VAL A . n A 1 94 VAL 94 144 144 VAL VAL A . n A 1 95 ASN 95 145 145 ASN ASN A . n A 1 96 ALA 96 146 146 ALA ALA A . n A 1 97 ASP 97 147 147 ASP ASP A . n A 1 98 VAL 98 148 148 VAL VAL A . n A 1 99 GLN 99 149 149 GLN GLN A . n A 1 100 ILE 100 150 150 ILE ILE A . n A 1 101 PRO 101 151 151 PRO PRO A . n A 1 102 GLY 102 152 152 GLY GLY A . n A 1 103 ALA 103 153 153 ALA ALA A . n A 1 104 THR 104 154 154 THR THR A . n A 1 105 SER 105 155 155 SER SER A . n A 1 106 LEU 106 156 156 LEU LEU A . n A 1 107 VAL 107 157 157 VAL VAL A . n A 1 108 LEU 108 158 158 LEU LEU A . n A 1 109 PRO 109 159 159 PRO PRO A . n A 1 110 HIS 110 160 160 HIS HIS A . n A 1 111 TYR 111 161 161 TYR TYR A . n A 1 112 GLN 112 162 162 GLN GLN A . n A 1 113 ALA 113 163 163 ALA ALA A . n A 1 114 THR 114 164 164 THR THR A . n A 1 115 ARG 115 165 165 ARG ARG A . n A 1 116 ASP 116 166 166 ASP ASP A . n A 1 117 ALA 117 167 167 ALA ALA A . n A 1 118 LEU 118 168 168 LEU LEU A . n A 1 119 ASP 119 169 169 ASP ASP A . n A 1 120 TYR 120 170 170 TYR TYR A . n A 1 121 LEU 121 171 171 LEU LEU A . n A 1 122 PHE 122 172 172 PHE PHE A . n A 1 123 ASN 123 173 173 ASN ASN A . n A 1 124 GLN 124 174 174 GLN GLN A . n A 1 125 GLY 125 175 175 GLY GLY A . n A 1 126 HIS 126 176 176 HIS HIS A . n A 1 127 ARG 127 177 177 ARG ARG A . n A 1 128 ARG 128 178 178 ARG ARG A . n A 1 129 PHE 129 179 179 PHE PHE A . n A 1 130 ALA 130 180 180 ALA ALA A . n A 1 131 TYR 131 181 181 TYR TYR A . n A 1 132 VAL 132 182 182 VAL VAL A . n A 1 133 SER 133 183 183 SER SER A . n A 1 134 GLY 134 184 184 GLY GLY A . n A 1 135 GLY 135 185 185 GLY GLY A . n A 1 136 THR 136 186 186 THR THR A . n A 1 137 ILE 137 187 187 ILE ILE A . n A 1 138 SER 138 188 188 SER SER A . n A 1 139 GLY 139 189 189 GLY GLY A . n A 1 140 ALA 140 190 190 ALA ALA A . n A 1 141 HIS 141 191 191 HIS HIS A . n A 1 142 HIS 142 192 192 HIS HIS A . n A 1 143 GLY 143 193 193 GLY GLY A . n A 1 144 GLN 144 194 194 GLN GLN A . n A 1 145 SER 145 195 195 SER SER A . n A 1 146 ARG 146 196 196 ARG ARG A . n A 1 147 THR 147 197 197 THR THR A . n A 1 148 GLN 148 198 198 GLN GLN A . n A 1 149 ALA 149 199 199 ALA ALA A . n A 1 150 PHE 150 200 200 PHE PHE A . n A 1 151 LEU 151 201 201 LEU LEU A . n A 1 152 ASP 152 202 202 ASP ASP A . n A 1 153 PHE 153 203 203 PHE PHE A . n A 1 154 MSE 154 204 204 MSE MSE A . n A 1 155 GLN 155 205 205 GLN GLN A . n A 1 156 ALA 156 206 206 ALA ALA A . n A 1 157 HIS 157 207 207 HIS HIS A . n A 1 158 GLN 158 208 208 GLN GLN A . n A 1 159 LEU 159 209 209 LEU LEU A . n A 1 160 LEU 160 210 210 LEU LEU A . n A 1 161 VAL 161 211 211 VAL VAL A . n A 1 162 ALA 162 212 212 ALA ALA A . n A 1 163 GLN 163 213 213 GLN GLN A . n A 1 164 ASP 164 214 214 ASP ASP A . n A 1 165 LEU 165 215 215 LEU LEU A . n A 1 166 LEU 166 216 216 LEU LEU A . n A 1 167 PHE 167 217 217 PHE PHE A . n A 1 168 GLY 168 218 218 GLY GLY A . n A 1 169 GLN 169 219 219 GLN GLN A . n A 1 170 ILE 170 220 220 ILE ILE A . n A 1 171 HIS 171 221 221 HIS HIS A . n A 1 172 THR 172 222 222 THR THR A . n A 1 173 ALA 173 223 223 ALA ALA A . n A 1 174 LYS 174 224 224 LYS LYS A . n A 1 175 GLU 175 225 225 GLU GLU A . n A 1 176 GLY 176 226 226 GLY GLY A . n A 1 177 GLN 177 227 227 GLN GLN A . n A 1 178 ALA 178 228 228 ALA ALA A . n A 1 179 VAL 179 229 229 VAL VAL A . n A 1 180 GLY 180 230 230 GLY GLY A . n A 1 181 LYS 181 231 231 LYS LYS A . n A 1 182 GLN 182 232 232 GLN GLN A . n A 1 183 LEU 183 233 233 LEU LEU A . n A 1 184 ALA 184 234 234 ALA ALA A . n A 1 185 SER 185 235 235 SER SER A . n A 1 186 LEU 186 236 236 LEU LEU A . n A 1 187 ALA 187 237 237 ALA ALA A . n A 1 188 PRO 188 238 238 PRO PRO A . n A 1 189 ASN 189 239 239 ASN ASN A . n A 1 190 VAL 190 240 240 VAL VAL A . n A 1 191 ARG 191 241 241 ARG ARG A . n A 1 192 PRO 192 242 242 PRO PRO A . n A 1 193 ASP 193 243 243 ASP ASP A . n A 1 194 ALA 194 244 244 ALA ALA A . n A 1 195 VAL 195 245 245 VAL VAL A . n A 1 196 PHE 196 246 246 PHE PHE A . n A 1 197 THR 197 247 247 THR THR A . n A 1 198 ASN 198 248 248 ASN ASN A . n A 1 199 SER 199 249 249 SER SER A . n A 1 200 ASP 200 250 250 ASP ASP A . n A 1 201 GLU 201 251 251 GLU GLU A . n A 1 202 VAL 202 252 252 VAL VAL A . n A 1 203 ALA 203 253 253 ALA ALA A . n A 1 204 VAL 204 254 254 VAL VAL A . n A 1 205 GLY 205 255 255 GLY GLY A . n A 1 206 VAL 206 256 256 VAL VAL A . n A 1 207 ILE 207 257 257 ILE ILE A . n A 1 208 ASP 208 258 258 ASP ASP A . n A 1 209 SER 209 259 259 SER SER A . n A 1 210 LEU 210 260 260 LEU LEU A . n A 1 211 LEU 211 261 261 LEU LEU A . n A 1 212 ALA 212 262 262 ALA ALA A . n A 1 213 ALA 213 263 263 ALA ALA A . n A 1 214 ASP 214 264 264 ASP ASP A . n A 1 215 VAL 215 265 265 VAL VAL A . n A 1 216 LYS 216 266 266 LYS LYS A . n A 1 217 VAL 217 267 267 VAL VAL A . n A 1 218 PRO 218 268 268 PRO PRO A . n A 1 219 ASP 219 269 269 ASP ASP A . n A 1 220 ASP 220 270 270 ASP ASP A . n A 1 221 ILE 221 271 271 ILE ILE A . n A 1 222 ALA 222 272 272 ALA ALA A . n A 1 223 VAL 223 273 273 VAL VAL A . n A 1 224 MSE 224 274 274 MSE MSE A . n A 1 225 GLY 225 275 275 GLY GLY A . n A 1 226 TYR 226 276 276 TYR TYR A . n A 1 227 ASP 227 277 277 ASP ASP A . n A 1 228 ASP 228 278 278 ASP ASP A . n A 1 229 GLN 229 279 279 GLN GLN A . n A 1 230 PRO 230 280 280 PRO PRO A . n A 1 231 PHE 231 281 281 PHE PHE A . n A 1 232 ALA 232 282 282 ALA ALA A . n A 1 233 PRO 233 283 283 PRO PRO A . n A 1 234 PHE 234 284 284 PHE PHE A . n A 1 235 ALA 235 285 285 ALA ALA A . n A 1 236 LYS 236 286 286 LYS LYS A . n A 1 237 ILE 237 287 287 ILE ILE A . n A 1 238 PRO 238 288 288 PRO PRO A . n A 1 239 LEU 239 289 289 LEU LEU A . n A 1 240 THR 240 290 290 THR THR A . n A 1 241 THR 241 291 291 THR THR A . n A 1 242 VAL 242 292 292 VAL VAL A . n A 1 243 HIS 243 293 293 HIS HIS A . n A 1 244 GLN 244 294 294 GLN GLN A . n A 1 245 PRO 245 295 295 PRO PRO A . n A 1 246 VAL 246 296 296 VAL VAL A . n A 1 247 ALA 247 297 297 ALA ALA A . n A 1 248 SER 248 298 298 SER SER A . n A 1 249 MSE 249 299 299 MSE MSE A . n A 1 250 ALA 250 300 300 ALA ALA A . n A 1 251 ALA 251 301 301 ALA ALA A . n A 1 252 ALA 252 302 302 ALA ALA A . n A 1 253 ALA 253 303 303 ALA ALA A . n A 1 254 THR 254 304 304 THR THR A . n A 1 255 HIS 255 305 305 HIS HIS A . n A 1 256 GLU 256 306 306 GLU GLU A . n A 1 257 LEU 257 307 307 LEU LEU A . n A 1 258 LEU 258 308 308 LEU LEU A . n A 1 259 LYS 259 309 309 LYS LYS A . n A 1 260 GLY 260 310 310 GLY GLY A . n A 1 261 LEU 261 311 311 LEU LEU A . n A 1 262 GLY 262 312 312 GLY GLY A . n A 1 263 ARG 263 313 313 ARG ARG A . n A 1 264 GLN 264 314 314 GLN GLN A . n A 1 265 VAL 265 315 315 VAL VAL A . n A 1 266 ALA 266 316 316 ALA ALA A . n A 1 267 GLN 267 317 317 GLN GLN A . n A 1 268 ASP 268 318 318 ASP ASP A . n A 1 269 THR 269 319 319 THR THR A . n A 1 270 GLN 270 320 320 GLN GLN A . n A 1 271 PRO 271 321 321 PRO PRO A . n A 1 272 THR 272 322 322 THR THR A . n A 1 273 LEU 273 323 323 LEU LEU A . n A 1 274 HIS 274 324 324 HIS HIS A . n A 1 275 LEU 275 325 325 LEU LEU A . n A 1 276 SER 276 326 326 SER SER A . n A 1 277 LEU 277 327 327 LEU LEU A . n A 1 278 LYS 278 328 328 LYS LYS A . n A 1 279 ILE 279 329 329 ILE ILE A . n A 1 280 ARG 280 330 330 ARG ARG A . n A 1 281 GLN 281 331 331 GLN GLN A . n A 1 282 SER 282 332 332 SER SER A . n A 1 283 ALA 283 333 333 ALA ALA A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'Enzyme Function Initiative' _pdbx_SG_project.full_name_of_center ? _pdbx_SG_project.initial_of_center ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA 1 401 1 NA NA A . D 4 ACT 1 403 1 ACT ACT A . E 5 HOH 1 501 2 HOH HOH A . E 5 HOH 2 502 3 HOH HOH A . E 5 HOH 3 503 4 HOH HOH A . E 5 HOH 4 504 5 HOH HOH A . E 5 HOH 5 505 6 HOH HOH A . E 5 HOH 6 506 7 HOH HOH A . E 5 HOH 7 507 8 HOH HOH A . E 5 HOH 8 508 9 HOH HOH A . E 5 HOH 9 509 10 HOH HOH A . E 5 HOH 10 510 11 HOH HOH A . E 5 HOH 11 511 12 HOH HOH A . E 5 HOH 12 512 13 HOH HOH A . E 5 HOH 13 513 14 HOH HOH A . E 5 HOH 14 514 15 HOH HOH A . E 5 HOH 15 515 16 HOH HOH A . E 5 HOH 16 516 17 HOH HOH A . E 5 HOH 17 517 18 HOH HOH A . E 5 HOH 18 518 19 HOH HOH A . E 5 HOH 19 519 20 HOH HOH A . E 5 HOH 20 520 21 HOH HOH A . E 5 HOH 21 521 22 HOH HOH A . E 5 HOH 22 522 23 HOH HOH A . E 5 HOH 23 523 24 HOH HOH A . E 5 HOH 24 524 25 HOH HOH A . E 5 HOH 25 525 26 HOH HOH A . E 5 HOH 26 526 27 HOH HOH A . E 5 HOH 27 527 28 HOH HOH A . E 5 HOH 28 528 29 HOH HOH A . E 5 HOH 29 529 30 HOH HOH A . E 5 HOH 30 530 31 HOH HOH A . E 5 HOH 31 531 32 HOH HOH A . E 5 HOH 32 532 33 HOH HOH A . E 5 HOH 33 533 34 HOH HOH A . E 5 HOH 34 534 35 HOH HOH A . E 5 HOH 35 535 36 HOH HOH A . E 5 HOH 36 536 37 HOH HOH A . E 5 HOH 37 537 38 HOH HOH A . E 5 HOH 38 538 39 HOH HOH A . E 5 HOH 39 539 40 HOH HOH A . E 5 HOH 40 540 41 HOH HOH A . E 5 HOH 41 541 42 HOH HOH A . E 5 HOH 42 542 43 HOH HOH A . E 5 HOH 43 543 44 HOH HOH A . E 5 HOH 44 544 45 HOH HOH A . E 5 HOH 45 545 46 HOH HOH A . E 5 HOH 46 546 47 HOH HOH A . E 5 HOH 47 547 48 HOH HOH A . E 5 HOH 48 548 49 HOH HOH A . E 5 HOH 49 549 50 HOH HOH A . E 5 HOH 50 550 52 HOH HOH A . E 5 HOH 51 551 53 HOH HOH A . E 5 HOH 52 552 54 HOH HOH A . E 5 HOH 53 553 55 HOH HOH A . E 5 HOH 54 554 56 HOH HOH A . E 5 HOH 55 555 57 HOH HOH A . E 5 HOH 56 556 58 HOH HOH A . E 5 HOH 57 557 59 HOH HOH A . E 5 HOH 58 558 61 HOH HOH A . E 5 HOH 59 559 62 HOH HOH A . E 5 HOH 60 560 63 HOH HOH A . E 5 HOH 61 561 64 HOH HOH A . E 5 HOH 62 562 65 HOH HOH A . E 5 HOH 63 563 66 HOH HOH A . E 5 HOH 64 564 67 HOH HOH A . E 5 HOH 65 565 68 HOH HOH A . E 5 HOH 66 566 69 HOH HOH A . E 5 HOH 67 567 70 HOH HOH A . E 5 HOH 68 568 72 HOH HOH A . E 5 HOH 69 569 73 HOH HOH A . E 5 HOH 70 570 74 HOH HOH A . E 5 HOH 71 571 75 HOH HOH A . E 5 HOH 72 572 76 HOH HOH A . E 5 HOH 73 573 77 HOH HOH A . E 5 HOH 74 574 78 HOH HOH A . E 5 HOH 75 575 79 HOH HOH A . E 5 HOH 76 576 80 HOH HOH A . E 5 HOH 77 577 81 HOH HOH A . E 5 HOH 78 578 82 HOH HOH A . E 5 HOH 79 579 83 HOH HOH A . E 5 HOH 80 580 84 HOH HOH A . E 5 HOH 81 581 85 HOH HOH A . E 5 HOH 82 582 87 HOH HOH A . E 5 HOH 83 583 88 HOH HOH A . E 5 HOH 84 584 89 HOH HOH A . E 5 HOH 85 585 90 HOH HOH A . E 5 HOH 86 586 91 HOH HOH A . E 5 HOH 87 587 92 HOH HOH A . E 5 HOH 88 588 93 HOH HOH A . E 5 HOH 89 589 94 HOH HOH A . E 5 HOH 90 590 96 HOH HOH A . E 5 HOH 91 591 97 HOH HOH A . E 5 HOH 92 592 98 HOH HOH A . E 5 HOH 93 593 99 HOH HOH A . E 5 HOH 94 594 100 HOH HOH A . E 5 HOH 95 595 101 HOH HOH A . E 5 HOH 96 596 102 HOH HOH A . E 5 HOH 97 597 103 HOH HOH A . E 5 HOH 98 598 104 HOH HOH A . E 5 HOH 99 599 105 HOH HOH A . E 5 HOH 100 600 106 HOH HOH A . E 5 HOH 101 601 107 HOH HOH A . E 5 HOH 102 602 108 HOH HOH A . E 5 HOH 103 603 109 HOH HOH A . E 5 HOH 104 604 110 HOH HOH A . E 5 HOH 105 605 111 HOH HOH A . E 5 HOH 106 606 112 HOH HOH A . E 5 HOH 107 607 113 HOH HOH A . E 5 HOH 108 608 114 HOH HOH A . E 5 HOH 109 609 115 HOH HOH A . E 5 HOH 110 610 116 HOH HOH A . E 5 HOH 111 611 117 HOH HOH A . E 5 HOH 112 612 118 HOH HOH A . E 5 HOH 113 613 119 HOH HOH A . E 5 HOH 114 614 122 HOH HOH A . E 5 HOH 115 615 123 HOH HOH A . E 5 HOH 116 616 124 HOH HOH A . E 5 HOH 117 617 125 HOH HOH A . E 5 HOH 118 618 126 HOH HOH A . E 5 HOH 119 619 127 HOH HOH A . E 5 HOH 120 620 128 HOH HOH A . E 5 HOH 121 621 129 HOH HOH A . E 5 HOH 122 622 131 HOH HOH A . E 5 HOH 123 623 132 HOH HOH A . E 5 HOH 124 624 133 HOH HOH A . E 5 HOH 125 625 134 HOH HOH A . E 5 HOH 126 626 135 HOH HOH A . E 5 HOH 127 627 136 HOH HOH A . E 5 HOH 128 628 138 HOH HOH A . E 5 HOH 129 629 139 HOH HOH A . E 5 HOH 130 630 140 HOH HOH A . E 5 HOH 131 631 141 HOH HOH A . E 5 HOH 132 632 142 HOH HOH A . E 5 HOH 133 633 143 HOH HOH A . E 5 HOH 134 634 144 HOH HOH A . E 5 HOH 135 635 145 HOH HOH A . E 5 HOH 136 636 147 HOH HOH A . E 5 HOH 137 637 148 HOH HOH A . E 5 HOH 138 638 149 HOH HOH A . E 5 HOH 139 639 152 HOH HOH A . E 5 HOH 140 640 154 HOH HOH A . E 5 HOH 141 641 155 HOH HOH A . E 5 HOH 142 642 156 HOH HOH A . E 5 HOH 143 643 157 HOH HOH A . E 5 HOH 144 644 158 HOH HOH A . E 5 HOH 145 645 159 HOH HOH A . E 5 HOH 146 646 160 HOH HOH A . E 5 HOH 147 647 162 HOH HOH A . E 5 HOH 148 648 163 HOH HOH A . E 5 HOH 149 649 164 HOH HOH A . E 5 HOH 150 650 165 HOH HOH A . E 5 HOH 151 651 167 HOH HOH A . E 5 HOH 152 652 168 HOH HOH A . E 5 HOH 153 653 169 HOH HOH A . E 5 HOH 154 654 170 HOH HOH A . E 5 HOH 155 655 172 HOH HOH A . E 5 HOH 156 656 174 HOH HOH A . E 5 HOH 157 657 177 HOH HOH A . E 5 HOH 158 658 178 HOH HOH A . E 5 HOH 159 659 179 HOH HOH A . E 5 HOH 160 660 180 HOH HOH A . E 5 HOH 161 661 181 HOH HOH A . E 5 HOH 162 662 182 HOH HOH A . E 5 HOH 163 663 186 HOH HOH A . E 5 HOH 164 664 189 HOH HOH A . E 5 HOH 165 665 190 HOH HOH A . E 5 HOH 166 666 191 HOH HOH A . E 5 HOH 167 667 192 HOH HOH A . E 5 HOH 168 668 194 HOH HOH A . E 5 HOH 169 669 195 HOH HOH A . E 5 HOH 170 670 197 HOH HOH A . E 5 HOH 171 671 198 HOH HOH A . E 5 HOH 172 672 200 HOH HOH A . E 5 HOH 173 673 201 HOH HOH A . E 5 HOH 174 674 203 HOH HOH A . E 5 HOH 175 675 204 HOH HOH A . E 5 HOH 176 676 206 HOH HOH A . E 5 HOH 177 677 208 HOH HOH A . E 5 HOH 178 678 212 HOH HOH A . E 5 HOH 179 679 215 HOH HOH A . E 5 HOH 180 680 216 HOH HOH A . E 5 HOH 181 681 217 HOH HOH A . E 5 HOH 182 682 218 HOH HOH A . E 5 HOH 183 683 220 HOH HOH A . E 5 HOH 184 684 223 HOH HOH A . E 5 HOH 185 685 224 HOH HOH A . E 5 HOH 186 686 225 HOH HOH A . E 5 HOH 187 687 226 HOH HOH A . E 5 HOH 188 688 227 HOH HOH A . E 5 HOH 189 689 228 HOH HOH A . E 5 HOH 190 690 229 HOH HOH A . E 5 HOH 191 691 230 HOH HOH A . E 5 HOH 192 692 232 HOH HOH A . E 5 HOH 193 693 233 HOH HOH A . E 5 HOH 194 694 234 HOH HOH A . E 5 HOH 195 695 235 HOH HOH A . E 5 HOH 196 696 237 HOH HOH A . E 5 HOH 197 697 238 HOH HOH A . E 5 HOH 198 698 239 HOH HOH A . E 5 HOH 199 699 240 HOH HOH A . E 5 HOH 200 700 243 HOH HOH A . E 5 HOH 201 701 245 HOH HOH A . E 5 HOH 202 702 250 HOH HOH A . E 5 HOH 203 703 251 HOH HOH A . E 5 HOH 204 704 252 HOH HOH A . E 5 HOH 205 705 253 HOH HOH A . E 5 HOH 206 706 256 HOH HOH A . E 5 HOH 207 707 257 HOH HOH A . E 5 HOH 208 708 258 HOH HOH A . E 5 HOH 209 709 260 HOH HOH A . E 5 HOH 210 710 261 HOH HOH A . E 5 HOH 211 711 263 HOH HOH A . E 5 HOH 212 712 265 HOH HOH A . E 5 HOH 213 713 266 HOH HOH A . E 5 HOH 214 714 268 HOH HOH A . E 5 HOH 215 715 269 HOH HOH A . E 5 HOH 216 716 270 HOH HOH A . E 5 HOH 217 717 271 HOH HOH A . E 5 HOH 218 718 272 HOH HOH A . E 5 HOH 219 719 273 HOH HOH A . E 5 HOH 220 720 274 HOH HOH A . E 5 HOH 221 721 275 HOH HOH A . E 5 HOH 222 722 276 HOH HOH A . E 5 HOH 223 723 277 HOH HOH A . E 5 HOH 224 724 280 HOH HOH A . E 5 HOH 225 725 281 HOH HOH A . E 5 HOH 226 726 282 HOH HOH A . E 5 HOH 227 727 283 HOH HOH A . E 5 HOH 228 728 284 HOH HOH A . E 5 HOH 229 729 285 HOH HOH A . E 5 HOH 230 730 288 HOH HOH A . E 5 HOH 231 731 289 HOH HOH A . E 5 HOH 232 732 290 HOH HOH A . E 5 HOH 233 733 291 HOH HOH A . E 5 HOH 234 734 292 HOH HOH A . E 5 HOH 235 735 293 HOH HOH A . E 5 HOH 236 736 294 HOH HOH A . E 5 HOH 237 737 297 HOH HOH A . E 5 HOH 238 738 299 HOH HOH A . E 5 HOH 239 739 300 HOH HOH A . E 5 HOH 240 740 301 HOH HOH A . E 5 HOH 241 741 302 HOH HOH A . E 5 HOH 242 742 303 HOH HOH A . E 5 HOH 243 743 305 HOH HOH A . E 5 HOH 244 744 306 HOH HOH A . E 5 HOH 245 745 307 HOH HOH A . E 5 HOH 246 746 308 HOH HOH A . E 5 HOH 247 747 309 HOH HOH A . E 5 HOH 248 748 310 HOH HOH A . E 5 HOH 249 749 311 HOH HOH A . E 5 HOH 250 750 312 HOH HOH A . E 5 HOH 251 751 313 HOH HOH A . E 5 HOH 252 752 314 HOH HOH A . E 5 HOH 253 753 315 HOH HOH A . E 5 HOH 254 754 316 HOH HOH A . E 5 HOH 255 755 317 HOH HOH A . E 5 HOH 256 756 318 HOH HOH A . E 5 HOH 257 757 319 HOH HOH A . E 5 HOH 258 758 320 HOH HOH A . E 5 HOH 259 759 321 HOH HOH A . E 5 HOH 260 760 322 HOH HOH A . E 5 HOH 261 761 323 HOH HOH A . E 5 HOH 262 762 324 HOH HOH A . E 5 HOH 263 763 325 HOH HOH A . E 5 HOH 264 764 326 HOH HOH A . E 5 HOH 265 765 327 HOH HOH A . E 5 HOH 266 766 328 HOH HOH A . E 5 HOH 267 767 329 HOH HOH A . E 5 HOH 268 768 330 HOH HOH A . E 5 HOH 269 769 331 HOH HOH A . E 5 HOH 270 770 332 HOH HOH A . E 5 HOH 271 771 333 HOH HOH A . E 5 HOH 272 772 334 HOH HOH A . E 5 HOH 273 773 335 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900003 _pdbx_molecule_features.name sucrose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900003 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 43 A MSE 93 ? MET SELENOMETHIONINE 2 A MSE 81 A MSE 131 ? MET SELENOMETHIONINE 3 A MSE 154 A MSE 204 ? MET SELENOMETHIONINE 4 A MSE 224 A MSE 274 ? MET SELENOMETHIONINE 5 A MSE 249 A MSE 299 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5160 ? 1 MORE -17 ? 1 'SSA (A^2)' 21340 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 125.7630000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id PHE _pdbx_struct_special_symmetry.auth_seq_id 281 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id A _pdbx_struct_special_symmetry.label_comp_id PHE _pdbx_struct_special_symmetry.label_seq_id 231 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASP 219 ? A ASP 269 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 537 ? 1_555 77.4 ? 2 O ? A ASP 219 ? A ASP 269 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 568 ? 1_555 158.9 ? 3 O ? E HOH . ? A HOH 537 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 568 ? 1_555 81.8 ? 4 O ? A ASP 219 ? A ASP 269 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 682 ? 1_555 139.5 ? 5 O ? E HOH . ? A HOH 537 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 682 ? 1_555 142.1 ? 6 O ? E HOH . ? A HOH 568 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 682 ? 1_555 61.6 ? 7 O ? A ASP 219 ? A ASP 269 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 719 ? 1_555 94.6 ? 8 O ? E HOH . ? A HOH 537 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 719 ? 1_555 79.4 ? 9 O ? E HOH . ? A HOH 568 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 719 ? 1_555 84.1 ? 10 O ? E HOH . ? A HOH 682 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 719 ? 1_555 87.4 ? 11 O ? A ASP 219 ? A ASP 269 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 720 ? 1_555 66.5 ? 12 O ? E HOH . ? A HOH 537 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 720 ? 1_555 142.3 ? 13 O ? E HOH . ? A HOH 568 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 720 ? 1_555 134.5 ? 14 O ? E HOH . ? A HOH 682 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 720 ? 1_555 73.0 ? 15 O ? E HOH . ? A HOH 719 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 720 ? 1_555 92.8 ? 16 O ? A ASP 219 ? A ASP 269 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 745 ? 1_555 85.2 ? 17 O ? E HOH . ? A HOH 537 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 745 ? 1_555 82.9 ? 18 O ? E HOH . ? A HOH 568 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 745 ? 1_555 89.5 ? 19 O ? E HOH . ? A HOH 682 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 745 ? 1_555 104.5 ? 20 O ? E HOH . ? A HOH 719 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 745 ? 1_555 161.8 ? 21 O ? E HOH . ? A HOH 720 ? 1_555 NA ? C NA . ? A NA 401 ? 1_555 O ? E HOH . ? A HOH 745 ? 1_555 103.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-05 2 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Non-polymer description' 6 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' chem_comp 4 2 'Structure model' entity 5 2 'Structure model' entity_name_com 6 2 'Structure model' pdbx_branch_scheme 7 2 'Structure model' pdbx_chem_comp_identifier 8 2 'Structure model' pdbx_entity_branch 9 2 'Structure model' pdbx_entity_branch_descriptor 10 2 'Structure model' pdbx_entity_branch_link 11 2 'Structure model' pdbx_entity_branch_list 12 2 'Structure model' pdbx_entity_nonpoly 13 2 'Structure model' pdbx_molecule_features 14 2 'Structure model' pdbx_nonpoly_scheme 15 2 'Structure model' pdbx_struct_conn_angle 16 2 'Structure model' struct_conn 17 2 'Structure model' struct_ref_seq_dif 18 2 'Structure model' struct_site 19 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.type_symbol' 14 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 21 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 22 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 23 2 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 24 2 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 25 2 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 26 2 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 27 2 'Structure model' '_atom_site_anisotrop.type_symbol' 28 2 'Structure model' '_chem_comp.formula' 29 2 'Structure model' '_chem_comp.formula_weight' 30 2 'Structure model' '_chem_comp.id' 31 2 'Structure model' '_chem_comp.mon_nstd_flag' 32 2 'Structure model' '_chem_comp.name' 33 2 'Structure model' '_chem_comp.type' 34 2 'Structure model' '_entity.formula_weight' 35 2 'Structure model' '_entity.pdbx_description' 36 2 'Structure model' '_entity.src_method' 37 2 'Structure model' '_entity.type' 38 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 39 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 40 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 41 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 42 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 43 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 44 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 45 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 46 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 47 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 48 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 49 2 'Structure model' '_pdbx_struct_conn_angle.value' 50 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 ARP/wARP 'model building' . ? 2 REFMAC refinement 5.8.0073 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A MSE 93 ? A SE A MSE 93 ? A CE A MSE 93 ? A 79.90 98.90 -19.00 2.20 N 2 1 CA A ASP 169 ? B C A ASP 169 ? ? O A ASP 169 ? ? 133.54 120.10 13.44 2.10 N 3 1 CA A ARG 313 ? A C A ARG 313 ? ? O A ARG 313 ? ? 134.33 120.10 14.23 2.10 N 4 1 CA A ARG 313 ? B C A ARG 313 ? ? O A ARG 313 ? ? 135.43 120.10 15.33 2.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 249 ? ? -174.20 131.51 2 1 ASP A 277 ? ? 124.81 -37.87 3 1 THR A 319 ? ? -39.95 162.72 4 1 GLN A 320 ? ? -174.39 60.50 5 1 ARG A 330 ? ? -125.13 -118.60 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 129 ? CG ? A ARG 79 CG 2 1 Y 1 A ARG 129 ? CD ? A ARG 79 CD 3 1 Y 1 A ARG 129 ? NE ? A ARG 79 NE 4 1 Y 1 A ARG 129 ? CZ ? A ARG 79 CZ 5 1 Y 1 A ARG 129 ? NH1 ? A ARG 79 NH1 6 1 Y 1 A ARG 129 ? NH2 ? A ARG 79 NH2 7 1 Y 1 A GLN 320 ? CG ? A GLN 270 CG 8 1 Y 1 A GLN 320 ? CD ? A GLN 270 CD 9 1 Y 1 A GLN 320 ? OE1 ? A GLN 270 OE1 10 1 Y 1 A GLN 320 ? NE2 ? A GLN 270 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 51 ? A GLN 1 2 1 Y 1 A SER 52 ? A SER 2 3 1 Y 1 A MSE 53 ? A MSE 3 4 1 Y 1 A LEU 54 ? A LEU 4 5 1 Y 1 A ARG 55 ? A ARG 5 6 1 Y 1 A ALA 56 ? A ALA 6 7 1 Y 1 A GLN 57 ? A GLN 7 8 1 Y 1 A ALA 58 ? A ALA 8 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GLC 1 B GLC 1 B SUC 1 n B 2 FRU 2 B FRU 2 B SUC 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DFrufb2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 FRU 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 'ACETATE ION' ACT 5 water HOH #