data_4RKE # _entry.id 4RKE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB RCSB087455 ? ? PDB 4RKE pdb_00004rke 10.2210/pdb4rke/pdb WWPDB D_1000087455 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-10 2 'Structure model' 1 1 2015-01-07 3 'Structure model' 1 2 2015-02-04 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_ref_seq_dif.details' 24 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 25 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 26 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RKE _pdbx_database_status.recvd_initial_deposition_date 2014-10-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1Z0A . unspecified PDB 4RKF . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lardong, J.A.' 1 'Driller, J.H.' 2 'Depner, H.' 3 'Weise, C.' 4 'Petzoldt, A.' 5 'Wahl, M.C.' 6 'Sigrist, S.J.' 7 'Loll, B.' 8 # _citation.id primary _citation.title 'Structures of Drosophila melanogaster Rab2 and Rab3 bound to GMPPNP.' _citation.journal_abbrev 'Acta Crystallogr F Struct Biol Commun' _citation.journal_volume 71 _citation.page_first 34 _citation.page_last 40 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country DK _citation.journal_id_ISSN 1744-3091 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25615965 _citation.pdbx_database_id_DOI 10.1107/S2053230X1402617X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lardong, J.A.' 1 ? primary 'Driller, J.H.' 2 ? primary 'Depner, H.' 3 ? primary 'Weise, C.' 4 ? primary 'Petzoldt, A.' 5 ? primary 'Wahl, M.C.' 6 ? primary 'Sigrist, S.J.' 7 ? primary 'Loll, B.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man GH01619p 19980.785 1 ? Q65L 'GTPase domain (UNP Residues 1-172)' ? 2 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'PENTAETHYLENE GLYCOL' 238.278 2 ? ? ? ? 5 water nat water 18.015 113 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Rab-protein 2, Rab2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLEAFRSITRSYY RGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANV EEAFINTAKEIYEKIQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLEAFRSITRSYY RGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANV EEAFINTAKEIYEKIQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 3 'MAGNESIUM ION' MG 4 'PENTAETHYLENE GLYCOL' 1PE 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 MET n 1 6 SER n 1 7 TYR n 1 8 ALA n 1 9 TYR n 1 10 LEU n 1 11 PHE n 1 12 LYS n 1 13 TYR n 1 14 ILE n 1 15 ILE n 1 16 ILE n 1 17 GLY n 1 18 ASP n 1 19 THR n 1 20 GLY n 1 21 VAL n 1 22 GLY n 1 23 LYS n 1 24 SER n 1 25 CYS n 1 26 LEU n 1 27 LEU n 1 28 LEU n 1 29 GLN n 1 30 PHE n 1 31 THR n 1 32 ASP n 1 33 LYS n 1 34 ARG n 1 35 PHE n 1 36 GLN n 1 37 PRO n 1 38 VAL n 1 39 HIS n 1 40 ASP n 1 41 LEU n 1 42 THR n 1 43 ILE n 1 44 GLY n 1 45 VAL n 1 46 GLU n 1 47 PHE n 1 48 GLY n 1 49 ALA n 1 50 ARG n 1 51 MET n 1 52 ILE n 1 53 THR n 1 54 ILE n 1 55 ASP n 1 56 GLY n 1 57 LYS n 1 58 GLN n 1 59 ILE n 1 60 LYS n 1 61 LEU n 1 62 GLN n 1 63 ILE n 1 64 TRP n 1 65 ASP n 1 66 THR n 1 67 ALA n 1 68 GLY n 1 69 LEU n 1 70 GLU n 1 71 ALA n 1 72 PHE n 1 73 ARG n 1 74 SER n 1 75 ILE n 1 76 THR n 1 77 ARG n 1 78 SER n 1 79 TYR n 1 80 TYR n 1 81 ARG n 1 82 GLY n 1 83 ALA n 1 84 ALA n 1 85 GLY n 1 86 ALA n 1 87 LEU n 1 88 LEU n 1 89 VAL n 1 90 TYR n 1 91 ASP n 1 92 ILE n 1 93 THR n 1 94 ARG n 1 95 ARG n 1 96 GLU n 1 97 THR n 1 98 PHE n 1 99 ASN n 1 100 HIS n 1 101 LEU n 1 102 THR n 1 103 THR n 1 104 TRP n 1 105 LEU n 1 106 GLU n 1 107 ASP n 1 108 ALA n 1 109 ARG n 1 110 GLN n 1 111 HIS n 1 112 SER n 1 113 ASN n 1 114 SER n 1 115 ASN n 1 116 MET n 1 117 VAL n 1 118 ILE n 1 119 MET n 1 120 LEU n 1 121 ILE n 1 122 GLY n 1 123 ASN n 1 124 LYS n 1 125 SER n 1 126 ASP n 1 127 LEU n 1 128 ASP n 1 129 SER n 1 130 ARG n 1 131 ARG n 1 132 GLU n 1 133 VAL n 1 134 LYS n 1 135 LYS n 1 136 GLU n 1 137 GLU n 1 138 GLY n 1 139 GLU n 1 140 ALA n 1 141 PHE n 1 142 ALA n 1 143 ARG n 1 144 GLU n 1 145 HIS n 1 146 GLY n 1 147 LEU n 1 148 VAL n 1 149 PHE n 1 150 MET n 1 151 GLU n 1 152 THR n 1 153 SER n 1 154 ALA n 1 155 ARG n 1 156 THR n 1 157 ALA n 1 158 ALA n 1 159 ASN n 1 160 VAL n 1 161 GLU n 1 162 GLU n 1 163 ALA n 1 164 PHE n 1 165 ILE n 1 166 ASN n 1 167 THR n 1 168 ALA n 1 169 LYS n 1 170 GLU n 1 171 ILE n 1 172 TYR n 1 173 GLU n 1 174 LYS n 1 175 ILE n 1 176 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Fruit fly' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Rab2, CG3269, Dmel_CG3269' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7227 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-MBP _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1PE non-polymer . 'PENTAETHYLENE GLYCOL' PEG400 'C10 H22 O6' 238.278 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 -3 GLY GLY A . n A 1 2 ALA 2 -2 -2 ALA ALA A . n A 1 3 MET 3 -1 -1 MET MET A . n A 1 4 GLY 4 0 0 GLY GLY A . n A 1 5 MET 5 1 1 MET MET A . n A 1 6 SER 6 2 2 SER SER A . n A 1 7 TYR 7 3 3 TYR TYR A . n A 1 8 ALA 8 4 4 ALA ALA A . n A 1 9 TYR 9 5 5 TYR TYR A . n A 1 10 LEU 10 6 6 LEU LEU A . n A 1 11 PHE 11 7 7 PHE PHE A . n A 1 12 LYS 12 8 8 LYS LYS A . n A 1 13 TYR 13 9 9 TYR TYR A . n A 1 14 ILE 14 10 10 ILE ILE A . n A 1 15 ILE 15 11 11 ILE ILE A . n A 1 16 ILE 16 12 12 ILE ILE A . n A 1 17 GLY 17 13 13 GLY GLY A . n A 1 18 ASP 18 14 14 ASP ASP A . n A 1 19 THR 19 15 15 THR THR A . n A 1 20 GLY 20 16 16 GLY GLY A . n A 1 21 VAL 21 17 17 VAL VAL A . n A 1 22 GLY 22 18 18 GLY GLY A . n A 1 23 LYS 23 19 19 LYS LYS A . n A 1 24 SER 24 20 20 SER SER A . n A 1 25 CYS 25 21 21 CYS CYS A . n A 1 26 LEU 26 22 22 LEU LEU A . n A 1 27 LEU 27 23 23 LEU LEU A . n A 1 28 LEU 28 24 24 LEU LEU A . n A 1 29 GLN 29 25 25 GLN GLN A . n A 1 30 PHE 30 26 26 PHE PHE A . n A 1 31 THR 31 27 27 THR THR A . n A 1 32 ASP 32 28 28 ASP ASP A . n A 1 33 LYS 33 29 29 LYS LYS A . n A 1 34 ARG 34 30 30 ARG ARG A . n A 1 35 PHE 35 31 31 PHE PHE A . n A 1 36 GLN 36 32 32 GLN GLN A . n A 1 37 PRO 37 33 33 PRO PRO A . n A 1 38 VAL 38 34 34 VAL VAL A . n A 1 39 HIS 39 35 35 HIS HIS A . n A 1 40 ASP 40 36 36 ASP ASP A . n A 1 41 LEU 41 37 37 LEU LEU A . n A 1 42 THR 42 38 38 THR THR A . n A 1 43 ILE 43 39 39 ILE ILE A . n A 1 44 GLY 44 40 40 GLY GLY A . n A 1 45 VAL 45 41 41 VAL VAL A . n A 1 46 GLU 46 42 42 GLU GLU A . n A 1 47 PHE 47 43 43 PHE PHE A . n A 1 48 GLY 48 44 44 GLY GLY A . n A 1 49 ALA 49 45 45 ALA ALA A . n A 1 50 ARG 50 46 46 ARG ARG A . n A 1 51 MET 51 47 47 MET MET A . n A 1 52 ILE 52 48 48 ILE ILE A . n A 1 53 THR 53 49 49 THR THR A . n A 1 54 ILE 54 50 50 ILE ILE A . n A 1 55 ASP 55 51 51 ASP ASP A . n A 1 56 GLY 56 52 52 GLY GLY A . n A 1 57 LYS 57 53 53 LYS LYS A . n A 1 58 GLN 58 54 54 GLN GLN A . n A 1 59 ILE 59 55 55 ILE ILE A . n A 1 60 LYS 60 56 56 LYS LYS A . n A 1 61 LEU 61 57 57 LEU LEU A . n A 1 62 GLN 62 58 58 GLN GLN A . n A 1 63 ILE 63 59 59 ILE ILE A . n A 1 64 TRP 64 60 60 TRP TRP A . n A 1 65 ASP 65 61 61 ASP ASP A . n A 1 66 THR 66 62 62 THR THR A . n A 1 67 ALA 67 63 63 ALA ALA A . n A 1 68 GLY 68 64 64 GLY GLY A . n A 1 69 LEU 69 65 65 LEU LEU A . n A 1 70 GLU 70 66 66 GLU GLU A . n A 1 71 ALA 71 67 67 ALA ALA A . n A 1 72 PHE 72 68 68 PHE PHE A . n A 1 73 ARG 73 69 69 ARG ARG A . n A 1 74 SER 74 70 70 SER SER A . n A 1 75 ILE 75 71 71 ILE ILE A . n A 1 76 THR 76 72 72 THR THR A . n A 1 77 ARG 77 73 73 ARG ARG A . n A 1 78 SER 78 74 74 SER SER A . n A 1 79 TYR 79 75 75 TYR TYR A . n A 1 80 TYR 80 76 76 TYR TYR A . n A 1 81 ARG 81 77 77 ARG ARG A . n A 1 82 GLY 82 78 78 GLY GLY A . n A 1 83 ALA 83 79 79 ALA ALA A . n A 1 84 ALA 84 80 80 ALA ALA A . n A 1 85 GLY 85 81 81 GLY GLY A . n A 1 86 ALA 86 82 82 ALA ALA A . n A 1 87 LEU 87 83 83 LEU LEU A . n A 1 88 LEU 88 84 84 LEU LEU A . n A 1 89 VAL 89 85 85 VAL VAL A . n A 1 90 TYR 90 86 86 TYR TYR A . n A 1 91 ASP 91 87 87 ASP ASP A . n A 1 92 ILE 92 88 88 ILE ILE A . n A 1 93 THR 93 89 89 THR THR A . n A 1 94 ARG 94 90 90 ARG ARG A . n A 1 95 ARG 95 91 91 ARG ARG A . n A 1 96 GLU 96 92 92 GLU GLU A . n A 1 97 THR 97 93 93 THR THR A . n A 1 98 PHE 98 94 94 PHE PHE A . n A 1 99 ASN 99 95 95 ASN ASN A . n A 1 100 HIS 100 96 96 HIS HIS A . n A 1 101 LEU 101 97 97 LEU LEU A . n A 1 102 THR 102 98 98 THR THR A . n A 1 103 THR 103 99 99 THR THR A . n A 1 104 TRP 104 100 100 TRP TRP A . n A 1 105 LEU 105 101 101 LEU LEU A . n A 1 106 GLU 106 102 102 GLU GLU A . n A 1 107 ASP 107 103 103 ASP ASP A . n A 1 108 ALA 108 104 104 ALA ALA A . n A 1 109 ARG 109 105 105 ARG ARG A . n A 1 110 GLN 110 106 106 GLN GLN A . n A 1 111 HIS 111 107 107 HIS HIS A . n A 1 112 SER 112 108 108 SER SER A . n A 1 113 ASN 113 109 109 ASN ASN A . n A 1 114 SER 114 110 110 SER SER A . n A 1 115 ASN 115 111 111 ASN ASN A . n A 1 116 MET 116 112 112 MET MET A . n A 1 117 VAL 117 113 113 VAL VAL A . n A 1 118 ILE 118 114 114 ILE ILE A . n A 1 119 MET 119 115 115 MET MET A . n A 1 120 LEU 120 116 116 LEU LEU A . n A 1 121 ILE 121 117 117 ILE ILE A . n A 1 122 GLY 122 118 118 GLY GLY A . n A 1 123 ASN 123 119 119 ASN ASN A . n A 1 124 LYS 124 120 120 LYS LYS A . n A 1 125 SER 125 121 121 SER SER A . n A 1 126 ASP 126 122 122 ASP ASP A . n A 1 127 LEU 127 123 123 LEU LEU A . n A 1 128 ASP 128 124 124 ASP ASP A . n A 1 129 SER 129 125 125 SER SER A . n A 1 130 ARG 130 126 126 ARG ARG A . n A 1 131 ARG 131 127 127 ARG ARG A . n A 1 132 GLU 132 128 128 GLU GLU A . n A 1 133 VAL 133 129 129 VAL VAL A . n A 1 134 LYS 134 130 130 LYS LYS A . n A 1 135 LYS 135 131 131 LYS LYS A . n A 1 136 GLU 136 132 132 GLU GLU A . n A 1 137 GLU 137 133 133 GLU GLU A . n A 1 138 GLY 138 134 134 GLY GLY A . n A 1 139 GLU 139 135 135 GLU GLU A . n A 1 140 ALA 140 136 136 ALA ALA A . n A 1 141 PHE 141 137 137 PHE PHE A . n A 1 142 ALA 142 138 138 ALA ALA A . n A 1 143 ARG 143 139 139 ARG ARG A . n A 1 144 GLU 144 140 140 GLU GLU A . n A 1 145 HIS 145 141 141 HIS HIS A . n A 1 146 GLY 146 142 142 GLY GLY A . n A 1 147 LEU 147 143 143 LEU LEU A . n A 1 148 VAL 148 144 144 VAL VAL A . n A 1 149 PHE 149 145 145 PHE PHE A . n A 1 150 MET 150 146 146 MET MET A . n A 1 151 GLU 151 147 147 GLU GLU A . n A 1 152 THR 152 148 148 THR THR A . n A 1 153 SER 153 149 149 SER SER A . n A 1 154 ALA 154 150 150 ALA ALA A . n A 1 155 ARG 155 151 151 ARG ARG A . n A 1 156 THR 156 152 152 THR THR A . n A 1 157 ALA 157 153 153 ALA ALA A . n A 1 158 ALA 158 154 154 ALA ALA A . n A 1 159 ASN 159 155 155 ASN ASN A . n A 1 160 VAL 160 156 156 VAL VAL A . n A 1 161 GLU 161 157 157 GLU GLU A . n A 1 162 GLU 162 158 158 GLU GLU A . n A 1 163 ALA 163 159 159 ALA ALA A . n A 1 164 PHE 164 160 160 PHE PHE A . n A 1 165 ILE 165 161 161 ILE ILE A . n A 1 166 ASN 166 162 162 ASN ASN A . n A 1 167 THR 167 163 163 THR THR A . n A 1 168 ALA 168 164 164 ALA ALA A . n A 1 169 LYS 169 165 165 LYS LYS A . n A 1 170 GLU 170 166 166 GLU GLU A . n A 1 171 ILE 171 167 167 ILE ILE A . n A 1 172 TYR 172 168 168 TYR TYR A . n A 1 173 GLU 173 169 169 GLU GLU A . n A 1 174 LYS 174 170 170 LYS LYS A . n A 1 175 ILE 175 171 171 ILE ILE A . n A 1 176 GLN 176 172 172 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP 1 201 200 GNP GNP A . C 3 MG 1 202 201 MG MG A . D 4 1PE 1 203 1 1PE 1PE A . E 4 1PE 1 204 2 1PE 1PE A . F 5 HOH 1 301 1 HOH HOH A . F 5 HOH 2 302 2 HOH HOH A . F 5 HOH 3 303 3 HOH HOH A . F 5 HOH 4 304 4 HOH HOH A . F 5 HOH 5 305 5 HOH HOH A . F 5 HOH 6 306 6 HOH HOH A . F 5 HOH 7 307 7 HOH HOH A . F 5 HOH 8 308 8 HOH HOH A . F 5 HOH 9 309 9 HOH HOH A . F 5 HOH 10 310 10 HOH HOH A . F 5 HOH 11 311 11 HOH HOH A . F 5 HOH 12 312 12 HOH HOH A . F 5 HOH 13 313 13 HOH HOH A . F 5 HOH 14 314 14 HOH HOH A . F 5 HOH 15 315 15 HOH HOH A . F 5 HOH 16 316 16 HOH HOH A . F 5 HOH 17 317 17 HOH HOH A . F 5 HOH 18 318 18 HOH HOH A . F 5 HOH 19 319 19 HOH HOH A . F 5 HOH 20 320 20 HOH HOH A . F 5 HOH 21 321 21 HOH HOH A . F 5 HOH 22 322 22 HOH HOH A . F 5 HOH 23 323 23 HOH HOH A . F 5 HOH 24 324 24 HOH HOH A . F 5 HOH 25 325 25 HOH HOH A . F 5 HOH 26 326 27 HOH HOH A . F 5 HOH 27 327 28 HOH HOH A . F 5 HOH 28 328 29 HOH HOH A . F 5 HOH 29 329 30 HOH HOH A . F 5 HOH 30 330 31 HOH HOH A . F 5 HOH 31 331 32 HOH HOH A . F 5 HOH 32 332 33 HOH HOH A . F 5 HOH 33 333 34 HOH HOH A . F 5 HOH 34 334 35 HOH HOH A . F 5 HOH 35 335 36 HOH HOH A . F 5 HOH 36 336 37 HOH HOH A . F 5 HOH 37 337 38 HOH HOH A . F 5 HOH 38 338 39 HOH HOH A . F 5 HOH 39 339 40 HOH HOH A . F 5 HOH 40 340 41 HOH HOH A . F 5 HOH 41 341 42 HOH HOH A . F 5 HOH 42 342 43 HOH HOH A . F 5 HOH 43 343 44 HOH HOH A . F 5 HOH 44 344 45 HOH HOH A . F 5 HOH 45 345 46 HOH HOH A . F 5 HOH 46 346 47 HOH HOH A . F 5 HOH 47 347 48 HOH HOH A . F 5 HOH 48 348 49 HOH HOH A . F 5 HOH 49 349 50 HOH HOH A . F 5 HOH 50 350 51 HOH HOH A . F 5 HOH 51 351 52 HOH HOH A . F 5 HOH 52 352 53 HOH HOH A . F 5 HOH 53 353 54 HOH HOH A . F 5 HOH 54 354 55 HOH HOH A . F 5 HOH 55 355 56 HOH HOH A . F 5 HOH 56 356 57 HOH HOH A . F 5 HOH 57 357 58 HOH HOH A . F 5 HOH 58 358 59 HOH HOH A . F 5 HOH 59 359 60 HOH HOH A . F 5 HOH 60 360 61 HOH HOH A . F 5 HOH 61 361 62 HOH HOH A . F 5 HOH 62 362 63 HOH HOH A . F 5 HOH 63 363 64 HOH HOH A . F 5 HOH 64 364 65 HOH HOH A . F 5 HOH 65 365 66 HOH HOH A . F 5 HOH 66 366 67 HOH HOH A . F 5 HOH 67 367 68 HOH HOH A . F 5 HOH 68 368 69 HOH HOH A . F 5 HOH 69 369 70 HOH HOH A . F 5 HOH 70 370 71 HOH HOH A . F 5 HOH 71 371 72 HOH HOH A . F 5 HOH 72 372 73 HOH HOH A . F 5 HOH 73 373 74 HOH HOH A . F 5 HOH 74 374 75 HOH HOH A . F 5 HOH 75 375 76 HOH HOH A . F 5 HOH 76 376 77 HOH HOH A . F 5 HOH 77 377 78 HOH HOH A . F 5 HOH 78 378 79 HOH HOH A . F 5 HOH 79 379 80 HOH HOH A . F 5 HOH 80 380 81 HOH HOH A . F 5 HOH 81 381 82 HOH HOH A . F 5 HOH 82 382 83 HOH HOH A . F 5 HOH 83 383 84 HOH HOH A . F 5 HOH 84 384 85 HOH HOH A . F 5 HOH 85 385 86 HOH HOH A . F 5 HOH 86 386 87 HOH HOH A . F 5 HOH 87 387 88 HOH HOH A . F 5 HOH 88 388 89 HOH HOH A . F 5 HOH 89 389 90 HOH HOH A . F 5 HOH 90 390 91 HOH HOH A . F 5 HOH 91 391 92 HOH HOH A . F 5 HOH 92 392 93 HOH HOH A . F 5 HOH 93 393 94 HOH HOH A . F 5 HOH 94 394 95 HOH HOH A . F 5 HOH 95 395 96 HOH HOH A . F 5 HOH 96 396 97 HOH HOH A . F 5 HOH 97 397 98 HOH HOH A . F 5 HOH 98 398 99 HOH HOH A . F 5 HOH 99 399 100 HOH HOH A . F 5 HOH 100 400 101 HOH HOH A . F 5 HOH 101 401 102 HOH HOH A . F 5 HOH 102 402 103 HOH HOH A . F 5 HOH 103 403 104 HOH HOH A . F 5 HOH 104 404 105 HOH HOH A . F 5 HOH 105 405 106 HOH HOH A . F 5 HOH 106 406 107 HOH HOH A . F 5 HOH 107 407 108 HOH HOH A . F 5 HOH 108 408 109 HOH HOH A . F 5 HOH 109 409 110 HOH HOH A . F 5 HOH 110 410 111 HOH HOH A . F 5 HOH 111 411 112 HOH HOH A . F 5 HOH 112 412 113 HOH HOH A . F 5 HOH 113 413 114 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 1PE 203 ? OH2 ? D 1PE 1 OH2 2 1 N 1 A 1PE 203 ? C12 ? D 1PE 1 C12 3 1 N 1 A 1PE 203 ? C22 ? D 1PE 1 C22 4 1 N 1 A 1PE 203 ? OH3 ? D 1PE 1 OH3 5 1 N 1 A 1PE 203 ? C13 ? D 1PE 1 C13 6 1 N 1 A 1PE 203 ? C23 ? D 1PE 1 C23 7 1 N 1 A 1PE 204 ? OH2 ? E 1PE 1 OH2 8 1 N 1 A 1PE 204 ? C12 ? E 1PE 1 C12 9 1 N 1 A 1PE 204 ? C22 ? E 1PE 1 C22 10 1 N 1 A 1PE 204 ? OH3 ? E 1PE 1 OH3 11 1 N 1 A 1PE 204 ? C13 ? E 1PE 1 C13 12 1 N 1 A 1PE 204 ? C23 ? E 1PE 1 C23 13 1 N 1 A 1PE 204 ? C16 ? E 1PE 1 C16 14 1 N 1 A 1PE 204 ? C26 ? E 1PE 1 C26 15 1 N 1 A 1PE 204 ? OH7 ? E 1PE 1 OH7 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.9_1692)' ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # _cell.entry_id 4RKE _cell.length_a 81.355 _cell.length_b 81.355 _cell.length_c 53.128 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RKE _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4RKE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_percent_sol 51.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '34% (v/v) polyethylene glycol 400; 200 mM Na acetate at pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 291K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.pdbx_collection_date 2014-04-24 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DOUBLE CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.895 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.3' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.3 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.895 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4RKE _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.00 _reflns.number_obs 13981 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 25.7 _reflns.pdbx_redundancy 5.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4RKE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13966 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.419 _refine.ls_d_res_high 2.0006 _refine.ls_percent_reflns_obs 99.66 _refine.ls_R_factor_obs 0.1697 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1668 _refine.ls_R_factor_R_free 0.2244 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 699 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.19 _refine.pdbx_overall_phase_error 22.08 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1404 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 113 _refine_hist.number_atoms_total 1567 _refine_hist.d_res_high 2.0006 _refine_hist.d_res_low 42.419 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 1492 'X-RAY DIFFRACTION' ? f_angle_d 1.103 ? ? 2014 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.941 ? ? 560 'X-RAY DIFFRACTION' ? f_chiral_restr 0.046 ? ? 221 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 250 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.0006 2.1551 2602 0.2207 99.00 0.2939 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.1551 2.3719 2615 0.1993 100.00 0.2613 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.3719 2.7151 2647 0.1815 100.00 0.2237 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.7151 3.4205 2655 0.1634 100.00 0.2414 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.4205 42.4290 2748 0.1373 99.00 0.1818 . . 146 . . . . # _database_PDB_matrix.entry_id 4RKE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4RKE _struct.title 'Drosophila melanogaster Rab2 bound to GMPPNP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RKE _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'GTP hydrolysis, hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O18333_DROME _struct_ref.pdbx_db_accession O18333 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAA GALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAF INTAKEIYEKIQ ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4RKE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 176 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O18333 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 172 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 172 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RKE GLY A 1 ? UNP O18333 ? ? 'expression tag' -3 1 1 4RKE ALA A 2 ? UNP O18333 ? ? 'expression tag' -2 2 1 4RKE MET A 3 ? UNP O18333 ? ? 'expression tag' -1 3 1 4RKE GLY A 4 ? UNP O18333 ? ? 'expression tag' 0 4 1 4RKE LEU A 69 ? UNP O18333 GLN 65 'engineered mutation' 65 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 22 ? LYS A 33 ? GLY A 18 LYS A 29 1 ? 12 HELX_P HELX_P2 2 ARG A 77 ? ARG A 81 ? ARG A 73 ARG A 77 5 ? 5 HELX_P HELX_P3 3 ARG A 94 ? HIS A 100 ? ARG A 90 HIS A 96 1 ? 7 HELX_P HELX_P4 4 HIS A 100 ? HIS A 111 ? HIS A 96 HIS A 107 1 ? 12 HELX_P HELX_P5 5 LEU A 127 ? ARG A 131 ? LEU A 123 ARG A 127 5 ? 5 HELX_P HELX_P6 6 LYS A 134 ? GLY A 146 ? LYS A 130 GLY A 142 1 ? 13 HELX_P HELX_P7 7 ASN A 159 ? GLN A 176 ? ASN A 155 GLN A 172 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 24 OG ? ? ? 1_555 C MG . MG ? ? A SER 20 A MG 202 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc2 metalc ? ? A THR 42 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 38 A MG 202 1_555 ? ? ? ? ? ? ? 2.074 ? ? metalc3 metalc ? ? B GNP . O2G ? ? ? 1_555 C MG . MG ? ? A GNP 201 A MG 202 1_555 ? ? ? ? ? ? ? 1.875 ? ? metalc4 metalc ? ? B GNP . O2B ? ? ? 1_555 C MG . MG ? ? A GNP 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 301 1_555 ? ? ? ? ? ? ? 2.161 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 302 1_555 ? ? ? ? ? ? ? 2.259 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 24 ? A SER 20 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 OG1 ? A THR 42 ? A THR 38 ? 1_555 88.6 ? 2 OG ? A SER 24 ? A SER 20 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2G ? B GNP . ? A GNP 201 ? 1_555 169.8 ? 3 OG1 ? A THR 42 ? A THR 38 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2G ? B GNP . ? A GNP 201 ? 1_555 84.7 ? 4 OG ? A SER 24 ? A SER 20 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B GNP . ? A GNP 201 ? 1_555 91.5 ? 5 OG1 ? A THR 42 ? A THR 38 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B GNP . ? A GNP 201 ? 1_555 179.0 ? 6 O2G ? B GNP . ? A GNP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O2B ? B GNP . ? A GNP 201 ? 1_555 95.3 ? 7 OG ? A SER 24 ? A SER 20 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 88.1 ? 8 OG1 ? A THR 42 ? A THR 38 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 86.2 ? 9 O2G ? B GNP . ? A GNP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 99.1 ? 10 O2B ? B GNP . ? A GNP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 301 ? 1_555 92.9 ? 11 OG ? A SER 24 ? A SER 20 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 81.8 ? 12 OG1 ? A THR 42 ? A THR 38 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 95.5 ? 13 O2G ? B GNP . ? A GNP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 91.2 ? 14 O2B ? B GNP . ? A GNP 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 85.5 ? 15 O ? F HOH . ? A HOH 301 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 302 ? 1_555 169.7 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 46 ? ILE A 54 ? GLU A 42 ILE A 50 A 2 LYS A 57 ? ASP A 65 ? LYS A 53 ASP A 61 A 3 TYR A 9 ? GLY A 17 ? TYR A 5 GLY A 13 A 4 GLY A 85 ? ASP A 91 ? GLY A 81 ASP A 87 A 5 VAL A 117 ? ASN A 123 ? VAL A 113 ASN A 119 A 6 VAL A 148 ? THR A 152 ? VAL A 144 THR A 148 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 50 ? N ARG A 46 O LEU A 61 ? O LEU A 57 A 2 3 O GLN A 62 ? O GLN A 58 N TYR A 13 ? N TYR A 9 A 3 4 N ILE A 14 ? N ILE A 10 O LEU A 87 ? O LEU A 83 A 4 5 N ALA A 86 ? N ALA A 82 O MET A 119 ? O MET A 115 A 5 6 N LEU A 120 ? N LEU A 116 O VAL A 148 ? O VAL A 144 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GNP 201 ? 26 'BINDING SITE FOR RESIDUE GNP A 201' AC2 Software A MG 202 ? 6 'BINDING SITE FOR RESIDUE MG A 202' AC3 Software A 1PE 203 ? 2 'BINDING SITE FOR RESIDUE 1PE A 203' AC4 Software A 1PE 204 ? 5 'BINDING SITE FOR RESIDUE 1PE A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 26 THR A 19 ? THR A 15 . ? 1_555 ? 2 AC1 26 GLY A 20 ? GLY A 16 . ? 1_555 ? 3 AC1 26 VAL A 21 ? VAL A 17 . ? 1_555 ? 4 AC1 26 GLY A 22 ? GLY A 18 . ? 1_555 ? 5 AC1 26 LYS A 23 ? LYS A 19 . ? 1_555 ? 6 AC1 26 SER A 24 ? SER A 20 . ? 1_555 ? 7 AC1 26 CYS A 25 ? CYS A 21 . ? 1_555 ? 8 AC1 26 PHE A 35 ? PHE A 31 . ? 1_555 ? 9 AC1 26 GLN A 36 ? GLN A 32 . ? 1_555 ? 10 AC1 26 PRO A 37 ? PRO A 33 . ? 1_555 ? 11 AC1 26 VAL A 38 ? VAL A 34 . ? 1_555 ? 12 AC1 26 HIS A 39 ? HIS A 35 . ? 1_555 ? 13 AC1 26 THR A 42 ? THR A 38 . ? 1_555 ? 14 AC1 26 GLY A 68 ? GLY A 64 . ? 1_555 ? 15 AC1 26 ASN A 123 ? ASN A 119 . ? 1_555 ? 16 AC1 26 LYS A 124 ? LYS A 120 . ? 1_555 ? 17 AC1 26 ASP A 126 ? ASP A 122 . ? 1_555 ? 18 AC1 26 LEU A 127 ? LEU A 123 . ? 1_555 ? 19 AC1 26 SER A 153 ? SER A 149 . ? 1_555 ? 20 AC1 26 ALA A 154 ? ALA A 150 . ? 1_555 ? 21 AC1 26 ARG A 155 ? ARG A 151 . ? 1_555 ? 22 AC1 26 MG C . ? MG A 202 . ? 1_555 ? 23 AC1 26 HOH F . ? HOH A 301 . ? 1_555 ? 24 AC1 26 HOH F . ? HOH A 302 . ? 1_555 ? 25 AC1 26 HOH F . ? HOH A 311 . ? 1_555 ? 26 AC1 26 HOH F . ? HOH A 320 . ? 1_555 ? 27 AC2 6 SER A 24 ? SER A 20 . ? 1_555 ? 28 AC2 6 THR A 42 ? THR A 38 . ? 1_555 ? 29 AC2 6 ARG A 81 ? ARG A 77 . ? 2_655 ? 30 AC2 6 GNP B . ? GNP A 201 . ? 1_555 ? 31 AC2 6 HOH F . ? HOH A 301 . ? 1_555 ? 32 AC2 6 HOH F . ? HOH A 302 . ? 1_555 ? 33 AC3 2 GLU A 139 ? GLU A 135 . ? 1_555 ? 34 AC3 2 LEU A 147 ? LEU A 143 . ? 1_555 ? 35 AC4 5 ARG A 73 ? ARG A 69 . ? 1_555 ? 36 AC4 5 THR A 103 ? THR A 99 . ? 1_555 ? 37 AC4 5 ASP A 107 ? ASP A 103 . ? 1_555 ? 38 AC4 5 HOH F . ? HOH A 350 . ? 1_555 ? 39 AC4 5 HOH F . ? HOH A 413 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 1 ? ? -127.30 -68.83 2 1 ILE A 39 ? ? -117.71 -74.01 3 1 ARG A 73 ? ? -95.57 32.93 4 1 LYS A 120 ? ? 72.47 40.05 5 1 LEU A 123 ? ? -97.83 51.25 6 1 ALA A 153 ? ? 84.21 8.38 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 376 ? F HOH . 2 1 A HOH 403 ? F HOH . 3 1 A HOH 412 ? F HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1PE OH2 O N N 1 1PE C12 C N N 2 1PE C22 C N N 3 1PE OH3 O N N 4 1PE C13 C N N 5 1PE C23 C N N 6 1PE OH4 O N N 7 1PE C14 C N N 8 1PE C24 C N N 9 1PE OH5 O N N 10 1PE C15 C N N 11 1PE C25 C N N 12 1PE OH6 O N N 13 1PE C16 C N N 14 1PE C26 C N N 15 1PE OH7 O N N 16 1PE HO2 H N N 17 1PE H121 H N N 18 1PE H122 H N N 19 1PE H221 H N N 20 1PE H222 H N N 21 1PE H131 H N N 22 1PE H132 H N N 23 1PE H231 H N N 24 1PE H232 H N N 25 1PE H141 H N N 26 1PE H142 H N N 27 1PE H241 H N N 28 1PE H242 H N N 29 1PE H151 H N N 30 1PE H152 H N N 31 1PE H251 H N N 32 1PE H252 H N N 33 1PE H161 H N N 34 1PE H162 H N N 35 1PE H261 H N N 36 1PE H262 H N N 37 1PE HO7 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 GLN N N N N 126 GLN CA C N S 127 GLN C C N N 128 GLN O O N N 129 GLN CB C N N 130 GLN CG C N N 131 GLN CD C N N 132 GLN OE1 O N N 133 GLN NE2 N N N 134 GLN OXT O N N 135 GLN H H N N 136 GLN H2 H N N 137 GLN HA H N N 138 GLN HB2 H N N 139 GLN HB3 H N N 140 GLN HG2 H N N 141 GLN HG3 H N N 142 GLN HE21 H N N 143 GLN HE22 H N N 144 GLN HXT H N N 145 GLU N N N N 146 GLU CA C N S 147 GLU C C N N 148 GLU O O N N 149 GLU CB C N N 150 GLU CG C N N 151 GLU CD C N N 152 GLU OE1 O N N 153 GLU OE2 O N N 154 GLU OXT O N N 155 GLU H H N N 156 GLU H2 H N N 157 GLU HA H N N 158 GLU HB2 H N N 159 GLU HB3 H N N 160 GLU HG2 H N N 161 GLU HG3 H N N 162 GLU HE2 H N N 163 GLU HXT H N N 164 GLY N N N N 165 GLY CA C N N 166 GLY C C N N 167 GLY O O N N 168 GLY OXT O N N 169 GLY H H N N 170 GLY H2 H N N 171 GLY HA2 H N N 172 GLY HA3 H N N 173 GLY HXT H N N 174 GNP PG P N N 175 GNP O1G O N N 176 GNP O2G O N N 177 GNP O3G O N N 178 GNP N3B N N N 179 GNP PB P N R 180 GNP O1B O N N 181 GNP O2B O N N 182 GNP O3A O N N 183 GNP PA P N S 184 GNP O1A O N N 185 GNP O2A O N N 186 GNP "O5'" O N N 187 GNP "C5'" C N N 188 GNP "C4'" C N R 189 GNP "O4'" O N N 190 GNP "C3'" C N S 191 GNP "O3'" O N N 192 GNP "C2'" C N R 193 GNP "O2'" O N N 194 GNP "C1'" C N R 195 GNP N9 N Y N 196 GNP C8 C Y N 197 GNP N7 N Y N 198 GNP C5 C Y N 199 GNP C6 C Y N 200 GNP O6 O N N 201 GNP N1 N Y N 202 GNP C2 C Y N 203 GNP N2 N N N 204 GNP N3 N Y N 205 GNP C4 C Y N 206 GNP HOG2 H N N 207 GNP HOG3 H N N 208 GNP HNB3 H N N 209 GNP HOB2 H N N 210 GNP HOA2 H N N 211 GNP "H5'2" H N N 212 GNP "H5'1" H N N 213 GNP "H4'" H N N 214 GNP "H3'" H N N 215 GNP "HO3'" H N N 216 GNP "H2'" H N N 217 GNP "HO2'" H N N 218 GNP "H1'" H N N 219 GNP H8 H N N 220 GNP HN1 H N N 221 GNP HN21 H N N 222 GNP HN22 H N N 223 HIS N N N N 224 HIS CA C N S 225 HIS C C N N 226 HIS O O N N 227 HIS CB C N N 228 HIS CG C Y N 229 HIS ND1 N Y N 230 HIS CD2 C Y N 231 HIS CE1 C Y N 232 HIS NE2 N Y N 233 HIS OXT O N N 234 HIS H H N N 235 HIS H2 H N N 236 HIS HA H N N 237 HIS HB2 H N N 238 HIS HB3 H N N 239 HIS HD1 H N N 240 HIS HD2 H N N 241 HIS HE1 H N N 242 HIS HE2 H N N 243 HIS HXT H N N 244 HOH O O N N 245 HOH H1 H N N 246 HOH H2 H N N 247 ILE N N N N 248 ILE CA C N S 249 ILE C C N N 250 ILE O O N N 251 ILE CB C N S 252 ILE CG1 C N N 253 ILE CG2 C N N 254 ILE CD1 C N N 255 ILE OXT O N N 256 ILE H H N N 257 ILE H2 H N N 258 ILE HA H N N 259 ILE HB H N N 260 ILE HG12 H N N 261 ILE HG13 H N N 262 ILE HG21 H N N 263 ILE HG22 H N N 264 ILE HG23 H N N 265 ILE HD11 H N N 266 ILE HD12 H N N 267 ILE HD13 H N N 268 ILE HXT H N N 269 LEU N N N N 270 LEU CA C N S 271 LEU C C N N 272 LEU O O N N 273 LEU CB C N N 274 LEU CG C N N 275 LEU CD1 C N N 276 LEU CD2 C N N 277 LEU OXT O N N 278 LEU H H N N 279 LEU H2 H N N 280 LEU HA H N N 281 LEU HB2 H N N 282 LEU HB3 H N N 283 LEU HG H N N 284 LEU HD11 H N N 285 LEU HD12 H N N 286 LEU HD13 H N N 287 LEU HD21 H N N 288 LEU HD22 H N N 289 LEU HD23 H N N 290 LEU HXT H N N 291 LYS N N N N 292 LYS CA C N S 293 LYS C C N N 294 LYS O O N N 295 LYS CB C N N 296 LYS CG C N N 297 LYS CD C N N 298 LYS CE C N N 299 LYS NZ N N N 300 LYS OXT O N N 301 LYS H H N N 302 LYS H2 H N N 303 LYS HA H N N 304 LYS HB2 H N N 305 LYS HB3 H N N 306 LYS HG2 H N N 307 LYS HG3 H N N 308 LYS HD2 H N N 309 LYS HD3 H N N 310 LYS HE2 H N N 311 LYS HE3 H N N 312 LYS HZ1 H N N 313 LYS HZ2 H N N 314 LYS HZ3 H N N 315 LYS HXT H N N 316 MET N N N N 317 MET CA C N S 318 MET C C N N 319 MET O O N N 320 MET CB C N N 321 MET CG C N N 322 MET SD S N N 323 MET CE C N N 324 MET OXT O N N 325 MET H H N N 326 MET H2 H N N 327 MET HA H N N 328 MET HB2 H N N 329 MET HB3 H N N 330 MET HG2 H N N 331 MET HG3 H N N 332 MET HE1 H N N 333 MET HE2 H N N 334 MET HE3 H N N 335 MET HXT H N N 336 MG MG MG N N 337 PHE N N N N 338 PHE CA C N S 339 PHE C C N N 340 PHE O O N N 341 PHE CB C N N 342 PHE CG C Y N 343 PHE CD1 C Y N 344 PHE CD2 C Y N 345 PHE CE1 C Y N 346 PHE CE2 C Y N 347 PHE CZ C Y N 348 PHE OXT O N N 349 PHE H H N N 350 PHE H2 H N N 351 PHE HA H N N 352 PHE HB2 H N N 353 PHE HB3 H N N 354 PHE HD1 H N N 355 PHE HD2 H N N 356 PHE HE1 H N N 357 PHE HE2 H N N 358 PHE HZ H N N 359 PHE HXT H N N 360 PRO N N N N 361 PRO CA C N S 362 PRO C C N N 363 PRO O O N N 364 PRO CB C N N 365 PRO CG C N N 366 PRO CD C N N 367 PRO OXT O N N 368 PRO H H N N 369 PRO HA H N N 370 PRO HB2 H N N 371 PRO HB3 H N N 372 PRO HG2 H N N 373 PRO HG3 H N N 374 PRO HD2 H N N 375 PRO HD3 H N N 376 PRO HXT H N N 377 SER N N N N 378 SER CA C N S 379 SER C C N N 380 SER O O N N 381 SER CB C N N 382 SER OG O N N 383 SER OXT O N N 384 SER H H N N 385 SER H2 H N N 386 SER HA H N N 387 SER HB2 H N N 388 SER HB3 H N N 389 SER HG H N N 390 SER HXT H N N 391 THR N N N N 392 THR CA C N S 393 THR C C N N 394 THR O O N N 395 THR CB C N R 396 THR OG1 O N N 397 THR CG2 C N N 398 THR OXT O N N 399 THR H H N N 400 THR H2 H N N 401 THR HA H N N 402 THR HB H N N 403 THR HG1 H N N 404 THR HG21 H N N 405 THR HG22 H N N 406 THR HG23 H N N 407 THR HXT H N N 408 TRP N N N N 409 TRP CA C N S 410 TRP C C N N 411 TRP O O N N 412 TRP CB C N N 413 TRP CG C Y N 414 TRP CD1 C Y N 415 TRP CD2 C Y N 416 TRP NE1 N Y N 417 TRP CE2 C Y N 418 TRP CE3 C Y N 419 TRP CZ2 C Y N 420 TRP CZ3 C Y N 421 TRP CH2 C Y N 422 TRP OXT O N N 423 TRP H H N N 424 TRP H2 H N N 425 TRP HA H N N 426 TRP HB2 H N N 427 TRP HB3 H N N 428 TRP HD1 H N N 429 TRP HE1 H N N 430 TRP HE3 H N N 431 TRP HZ2 H N N 432 TRP HZ3 H N N 433 TRP HH2 H N N 434 TRP HXT H N N 435 TYR N N N N 436 TYR CA C N S 437 TYR C C N N 438 TYR O O N N 439 TYR CB C N N 440 TYR CG C Y N 441 TYR CD1 C Y N 442 TYR CD2 C Y N 443 TYR CE1 C Y N 444 TYR CE2 C Y N 445 TYR CZ C Y N 446 TYR OH O N N 447 TYR OXT O N N 448 TYR H H N N 449 TYR H2 H N N 450 TYR HA H N N 451 TYR HB2 H N N 452 TYR HB3 H N N 453 TYR HD1 H N N 454 TYR HD2 H N N 455 TYR HE1 H N N 456 TYR HE2 H N N 457 TYR HH H N N 458 TYR HXT H N N 459 VAL N N N N 460 VAL CA C N S 461 VAL C C N N 462 VAL O O N N 463 VAL CB C N N 464 VAL CG1 C N N 465 VAL CG2 C N N 466 VAL OXT O N N 467 VAL H H N N 468 VAL H2 H N N 469 VAL HA H N N 470 VAL HB H N N 471 VAL HG11 H N N 472 VAL HG12 H N N 473 VAL HG13 H N N 474 VAL HG21 H N N 475 VAL HG22 H N N 476 VAL HG23 H N N 477 VAL HXT H N N 478 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1PE OH2 C12 sing N N 1 1PE OH2 HO2 sing N N 2 1PE C12 C22 sing N N 3 1PE C12 H121 sing N N 4 1PE C12 H122 sing N N 5 1PE C22 OH3 sing N N 6 1PE C22 H221 sing N N 7 1PE C22 H222 sing N N 8 1PE OH3 C23 sing N N 9 1PE C13 C23 sing N N 10 1PE C13 OH4 sing N N 11 1PE C13 H131 sing N N 12 1PE C13 H132 sing N N 13 1PE C23 H231 sing N N 14 1PE C23 H232 sing N N 15 1PE OH4 C24 sing N N 16 1PE C14 C24 sing N N 17 1PE C14 OH5 sing N N 18 1PE C14 H141 sing N N 19 1PE C14 H142 sing N N 20 1PE C24 H241 sing N N 21 1PE C24 H242 sing N N 22 1PE OH5 C25 sing N N 23 1PE C15 C25 sing N N 24 1PE C15 OH6 sing N N 25 1PE C15 H151 sing N N 26 1PE C15 H152 sing N N 27 1PE C25 H251 sing N N 28 1PE C25 H252 sing N N 29 1PE OH6 C26 sing N N 30 1PE C16 C26 sing N N 31 1PE C16 OH7 sing N N 32 1PE C16 H161 sing N N 33 1PE C16 H162 sing N N 34 1PE C26 H261 sing N N 35 1PE C26 H262 sing N N 36 1PE OH7 HO7 sing N N 37 ALA N CA sing N N 38 ALA N H sing N N 39 ALA N H2 sing N N 40 ALA CA C sing N N 41 ALA CA CB sing N N 42 ALA CA HA sing N N 43 ALA C O doub N N 44 ALA C OXT sing N N 45 ALA CB HB1 sing N N 46 ALA CB HB2 sing N N 47 ALA CB HB3 sing N N 48 ALA OXT HXT sing N N 49 ARG N CA sing N N 50 ARG N H sing N N 51 ARG N H2 sing N N 52 ARG CA C sing N N 53 ARG CA CB sing N N 54 ARG CA HA sing N N 55 ARG C O doub N N 56 ARG C OXT sing N N 57 ARG CB CG sing N N 58 ARG CB HB2 sing N N 59 ARG CB HB3 sing N N 60 ARG CG CD sing N N 61 ARG CG HG2 sing N N 62 ARG CG HG3 sing N N 63 ARG CD NE sing N N 64 ARG CD HD2 sing N N 65 ARG CD HD3 sing N N 66 ARG NE CZ sing N N 67 ARG NE HE sing N N 68 ARG CZ NH1 sing N N 69 ARG CZ NH2 doub N N 70 ARG NH1 HH11 sing N N 71 ARG NH1 HH12 sing N N 72 ARG NH2 HH21 sing N N 73 ARG NH2 HH22 sing N N 74 ARG OXT HXT sing N N 75 ASN N CA sing N N 76 ASN N H sing N N 77 ASN N H2 sing N N 78 ASN CA C sing N N 79 ASN CA CB sing N N 80 ASN CA HA sing N N 81 ASN C O doub N N 82 ASN C OXT sing N N 83 ASN CB CG sing N N 84 ASN CB HB2 sing N N 85 ASN CB HB3 sing N N 86 ASN CG OD1 doub N N 87 ASN CG ND2 sing N N 88 ASN ND2 HD21 sing N N 89 ASN ND2 HD22 sing N N 90 ASN OXT HXT sing N N 91 ASP N CA sing N N 92 ASP N H sing N N 93 ASP N H2 sing N N 94 ASP CA C sing N N 95 ASP CA CB sing N N 96 ASP CA HA sing N N 97 ASP C O doub N N 98 ASP C OXT sing N N 99 ASP CB CG sing N N 100 ASP CB HB2 sing N N 101 ASP CB HB3 sing N N 102 ASP CG OD1 doub N N 103 ASP CG OD2 sing N N 104 ASP OD2 HD2 sing N N 105 ASP OXT HXT sing N N 106 CYS N CA sing N N 107 CYS N H sing N N 108 CYS N H2 sing N N 109 CYS CA C sing N N 110 CYS CA CB sing N N 111 CYS CA HA sing N N 112 CYS C O doub N N 113 CYS C OXT sing N N 114 CYS CB SG sing N N 115 CYS CB HB2 sing N N 116 CYS CB HB3 sing N N 117 CYS SG HG sing N N 118 CYS OXT HXT sing N N 119 GLN N CA sing N N 120 GLN N H sing N N 121 GLN N H2 sing N N 122 GLN CA C sing N N 123 GLN CA CB sing N N 124 GLN CA HA sing N N 125 GLN C O doub N N 126 GLN C OXT sing N N 127 GLN CB CG sing N N 128 GLN CB HB2 sing N N 129 GLN CB HB3 sing N N 130 GLN CG CD sing N N 131 GLN CG HG2 sing N N 132 GLN CG HG3 sing N N 133 GLN CD OE1 doub N N 134 GLN CD NE2 sing N N 135 GLN NE2 HE21 sing N N 136 GLN NE2 HE22 sing N N 137 GLN OXT HXT sing N N 138 GLU N CA sing N N 139 GLU N H sing N N 140 GLU N H2 sing N N 141 GLU CA C sing N N 142 GLU CA CB sing N N 143 GLU CA HA sing N N 144 GLU C O doub N N 145 GLU C OXT sing N N 146 GLU CB CG sing N N 147 GLU CB HB2 sing N N 148 GLU CB HB3 sing N N 149 GLU CG CD sing N N 150 GLU CG HG2 sing N N 151 GLU CG HG3 sing N N 152 GLU CD OE1 doub N N 153 GLU CD OE2 sing N N 154 GLU OE2 HE2 sing N N 155 GLU OXT HXT sing N N 156 GLY N CA sing N N 157 GLY N H sing N N 158 GLY N H2 sing N N 159 GLY CA C sing N N 160 GLY CA HA2 sing N N 161 GLY CA HA3 sing N N 162 GLY C O doub N N 163 GLY C OXT sing N N 164 GLY OXT HXT sing N N 165 GNP PG O1G doub N N 166 GNP PG O2G sing N N 167 GNP PG O3G sing N N 168 GNP PG N3B sing N N 169 GNP O2G HOG2 sing N N 170 GNP O3G HOG3 sing N N 171 GNP N3B PB sing N N 172 GNP N3B HNB3 sing N N 173 GNP PB O1B doub N N 174 GNP PB O2B sing N N 175 GNP PB O3A sing N N 176 GNP O2B HOB2 sing N N 177 GNP O3A PA sing N N 178 GNP PA O1A doub N N 179 GNP PA O2A sing N N 180 GNP PA "O5'" sing N N 181 GNP O2A HOA2 sing N N 182 GNP "O5'" "C5'" sing N N 183 GNP "C5'" "C4'" sing N N 184 GNP "C5'" "H5'2" sing N N 185 GNP "C5'" "H5'1" sing N N 186 GNP "C4'" "O4'" sing N N 187 GNP "C4'" "C3'" sing N N 188 GNP "C4'" "H4'" sing N N 189 GNP "O4'" "C1'" sing N N 190 GNP "C3'" "O3'" sing N N 191 GNP "C3'" "C2'" sing N N 192 GNP "C3'" "H3'" sing N N 193 GNP "O3'" "HO3'" sing N N 194 GNP "C2'" "O2'" sing N N 195 GNP "C2'" "C1'" sing N N 196 GNP "C2'" "H2'" sing N N 197 GNP "O2'" "HO2'" sing N N 198 GNP "C1'" N9 sing N N 199 GNP "C1'" "H1'" sing N N 200 GNP N9 C8 sing Y N 201 GNP N9 C4 sing Y N 202 GNP C8 N7 doub Y N 203 GNP C8 H8 sing N N 204 GNP N7 C5 sing Y N 205 GNP C5 C6 sing Y N 206 GNP C5 C4 doub Y N 207 GNP C6 O6 doub N N 208 GNP C6 N1 sing Y N 209 GNP N1 C2 sing Y N 210 GNP N1 HN1 sing N N 211 GNP C2 N2 sing N N 212 GNP C2 N3 doub Y N 213 GNP N2 HN21 sing N N 214 GNP N2 HN22 sing N N 215 GNP N3 C4 sing Y N 216 HIS N CA sing N N 217 HIS N H sing N N 218 HIS N H2 sing N N 219 HIS CA C sing N N 220 HIS CA CB sing N N 221 HIS CA HA sing N N 222 HIS C O doub N N 223 HIS C OXT sing N N 224 HIS CB CG sing N N 225 HIS CB HB2 sing N N 226 HIS CB HB3 sing N N 227 HIS CG ND1 sing Y N 228 HIS CG CD2 doub Y N 229 HIS ND1 CE1 doub Y N 230 HIS ND1 HD1 sing N N 231 HIS CD2 NE2 sing Y N 232 HIS CD2 HD2 sing N N 233 HIS CE1 NE2 sing Y N 234 HIS CE1 HE1 sing N N 235 HIS NE2 HE2 sing N N 236 HIS OXT HXT sing N N 237 HOH O H1 sing N N 238 HOH O H2 sing N N 239 ILE N CA sing N N 240 ILE N H sing N N 241 ILE N H2 sing N N 242 ILE CA C sing N N 243 ILE CA CB sing N N 244 ILE CA HA sing N N 245 ILE C O doub N N 246 ILE C OXT sing N N 247 ILE CB CG1 sing N N 248 ILE CB CG2 sing N N 249 ILE CB HB sing N N 250 ILE CG1 CD1 sing N N 251 ILE CG1 HG12 sing N N 252 ILE CG1 HG13 sing N N 253 ILE CG2 HG21 sing N N 254 ILE CG2 HG22 sing N N 255 ILE CG2 HG23 sing N N 256 ILE CD1 HD11 sing N N 257 ILE CD1 HD12 sing N N 258 ILE CD1 HD13 sing N N 259 ILE OXT HXT sing N N 260 LEU N CA sing N N 261 LEU N H sing N N 262 LEU N H2 sing N N 263 LEU CA C sing N N 264 LEU CA CB sing N N 265 LEU CA HA sing N N 266 LEU C O doub N N 267 LEU C OXT sing N N 268 LEU CB CG sing N N 269 LEU CB HB2 sing N N 270 LEU CB HB3 sing N N 271 LEU CG CD1 sing N N 272 LEU CG CD2 sing N N 273 LEU CG HG sing N N 274 LEU CD1 HD11 sing N N 275 LEU CD1 HD12 sing N N 276 LEU CD1 HD13 sing N N 277 LEU CD2 HD21 sing N N 278 LEU CD2 HD22 sing N N 279 LEU CD2 HD23 sing N N 280 LEU OXT HXT sing N N 281 LYS N CA sing N N 282 LYS N H sing N N 283 LYS N H2 sing N N 284 LYS CA C sing N N 285 LYS CA CB sing N N 286 LYS CA HA sing N N 287 LYS C O doub N N 288 LYS C OXT sing N N 289 LYS CB CG sing N N 290 LYS CB HB2 sing N N 291 LYS CB HB3 sing N N 292 LYS CG CD sing N N 293 LYS CG HG2 sing N N 294 LYS CG HG3 sing N N 295 LYS CD CE sing N N 296 LYS CD HD2 sing N N 297 LYS CD HD3 sing N N 298 LYS CE NZ sing N N 299 LYS CE HE2 sing N N 300 LYS CE HE3 sing N N 301 LYS NZ HZ1 sing N N 302 LYS NZ HZ2 sing N N 303 LYS NZ HZ3 sing N N 304 LYS OXT HXT sing N N 305 MET N CA sing N N 306 MET N H sing N N 307 MET N H2 sing N N 308 MET CA C sing N N 309 MET CA CB sing N N 310 MET CA HA sing N N 311 MET C O doub N N 312 MET C OXT sing N N 313 MET CB CG sing N N 314 MET CB HB2 sing N N 315 MET CB HB3 sing N N 316 MET CG SD sing N N 317 MET CG HG2 sing N N 318 MET CG HG3 sing N N 319 MET SD CE sing N N 320 MET CE HE1 sing N N 321 MET CE HE2 sing N N 322 MET CE HE3 sing N N 323 MET OXT HXT sing N N 324 PHE N CA sing N N 325 PHE N H sing N N 326 PHE N H2 sing N N 327 PHE CA C sing N N 328 PHE CA CB sing N N 329 PHE CA HA sing N N 330 PHE C O doub N N 331 PHE C OXT sing N N 332 PHE CB CG sing N N 333 PHE CB HB2 sing N N 334 PHE CB HB3 sing N N 335 PHE CG CD1 doub Y N 336 PHE CG CD2 sing Y N 337 PHE CD1 CE1 sing Y N 338 PHE CD1 HD1 sing N N 339 PHE CD2 CE2 doub Y N 340 PHE CD2 HD2 sing N N 341 PHE CE1 CZ doub Y N 342 PHE CE1 HE1 sing N N 343 PHE CE2 CZ sing Y N 344 PHE CE2 HE2 sing N N 345 PHE CZ HZ sing N N 346 PHE OXT HXT sing N N 347 PRO N CA sing N N 348 PRO N CD sing N N 349 PRO N H sing N N 350 PRO CA C sing N N 351 PRO CA CB sing N N 352 PRO CA HA sing N N 353 PRO C O doub N N 354 PRO C OXT sing N N 355 PRO CB CG sing N N 356 PRO CB HB2 sing N N 357 PRO CB HB3 sing N N 358 PRO CG CD sing N N 359 PRO CG HG2 sing N N 360 PRO CG HG3 sing N N 361 PRO CD HD2 sing N N 362 PRO CD HD3 sing N N 363 PRO OXT HXT sing N N 364 SER N CA sing N N 365 SER N H sing N N 366 SER N H2 sing N N 367 SER CA C sing N N 368 SER CA CB sing N N 369 SER CA HA sing N N 370 SER C O doub N N 371 SER C OXT sing N N 372 SER CB OG sing N N 373 SER CB HB2 sing N N 374 SER CB HB3 sing N N 375 SER OG HG sing N N 376 SER OXT HXT sing N N 377 THR N CA sing N N 378 THR N H sing N N 379 THR N H2 sing N N 380 THR CA C sing N N 381 THR CA CB sing N N 382 THR CA HA sing N N 383 THR C O doub N N 384 THR C OXT sing N N 385 THR CB OG1 sing N N 386 THR CB CG2 sing N N 387 THR CB HB sing N N 388 THR OG1 HG1 sing N N 389 THR CG2 HG21 sing N N 390 THR CG2 HG22 sing N N 391 THR CG2 HG23 sing N N 392 THR OXT HXT sing N N 393 TRP N CA sing N N 394 TRP N H sing N N 395 TRP N H2 sing N N 396 TRP CA C sing N N 397 TRP CA CB sing N N 398 TRP CA HA sing N N 399 TRP C O doub N N 400 TRP C OXT sing N N 401 TRP CB CG sing N N 402 TRP CB HB2 sing N N 403 TRP CB HB3 sing N N 404 TRP CG CD1 doub Y N 405 TRP CG CD2 sing Y N 406 TRP CD1 NE1 sing Y N 407 TRP CD1 HD1 sing N N 408 TRP CD2 CE2 doub Y N 409 TRP CD2 CE3 sing Y N 410 TRP NE1 CE2 sing Y N 411 TRP NE1 HE1 sing N N 412 TRP CE2 CZ2 sing Y N 413 TRP CE3 CZ3 doub Y N 414 TRP CE3 HE3 sing N N 415 TRP CZ2 CH2 doub Y N 416 TRP CZ2 HZ2 sing N N 417 TRP CZ3 CH2 sing Y N 418 TRP CZ3 HZ3 sing N N 419 TRP CH2 HH2 sing N N 420 TRP OXT HXT sing N N 421 TYR N CA sing N N 422 TYR N H sing N N 423 TYR N H2 sing N N 424 TYR CA C sing N N 425 TYR CA CB sing N N 426 TYR CA HA sing N N 427 TYR C O doub N N 428 TYR C OXT sing N N 429 TYR CB CG sing N N 430 TYR CB HB2 sing N N 431 TYR CB HB3 sing N N 432 TYR CG CD1 doub Y N 433 TYR CG CD2 sing Y N 434 TYR CD1 CE1 sing Y N 435 TYR CD1 HD1 sing N N 436 TYR CD2 CE2 doub Y N 437 TYR CD2 HD2 sing N N 438 TYR CE1 CZ doub Y N 439 TYR CE1 HE1 sing N N 440 TYR CE2 CZ sing Y N 441 TYR CE2 HE2 sing N N 442 TYR CZ OH sing N N 443 TYR OH HH sing N N 444 TYR OXT HXT sing N N 445 VAL N CA sing N N 446 VAL N H sing N N 447 VAL N H2 sing N N 448 VAL CA C sing N N 449 VAL CA CB sing N N 450 VAL CA HA sing N N 451 VAL C O doub N N 452 VAL C OXT sing N N 453 VAL CB CG1 sing N N 454 VAL CB CG2 sing N N 455 VAL CB HB sing N N 456 VAL CG1 HG11 sing N N 457 VAL CG1 HG12 sing N N 458 VAL CG1 HG13 sing N N 459 VAL CG2 HG21 sing N N 460 VAL CG2 HG22 sing N N 461 VAL CG2 HG23 sing N N 462 VAL OXT HXT sing N N 463 # _atom_sites.entry_id 4RKE _atom_sites.fract_transf_matrix[1][1] 0.012292 _atom_sites.fract_transf_matrix[1][2] 0.007097 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014193 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018822 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H MG N O P S # loop_