HEADER HYDROLASE 15-OCT-14 4RL3 TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A FAMILY GH18 CHITINASE TITLE 2 FROM FERN, PETERIS RYUKYUENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (UNP RESIDIES 153-423); COMPND 5 EC: 3.2.1.14; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PTERIS RYUKYUENSIS; SOURCE 3 ORGANISM_TAXID: 367335; SOURCE 4 GENE: PRCHIA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-22B KEYWDS CHITINASE, HYDROLASE, CARBOHYDRATE EXPDTA X-RAY DIFFRACTION AUTHOR N.UMEMOTO,T.NUMATA,T.OHNUMA,T.FUKAMIZO REVDAT 2 08-NOV-23 4RL3 1 REMARK SEQADV LINK REVDAT 1 14-OCT-15 4RL3 0 JRNL AUTH Y.KITAOKU,N.UMEMOTO,T.OHNUMA,T.NUMATA,T.TAIRA,S.SAKUDA, JRNL AUTH 2 T.FUKAMIZO JRNL TITL A CLASS III CHITINASE WITHOUT DISULFIDE BONDS FROM THE FERN, JRNL TITL 2 PTERIS RYUKYUENSIS: CRYSTAL STRUCTURE AND LIGAND-BINDING JRNL TITL 3 STUDIES. JRNL REF PLANTA V. 242 895 2015 JRNL REFN ISSN 0032-0935 JRNL PMID 25998529 JRNL DOI 10.1007/S00425-015-2330-4 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 66710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3550 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.57 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4797 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.1490 REMARK 3 BIN FREE R VALUE SET COUNT : 244 REMARK 3 BIN FREE R VALUE : 0.1720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4052 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 528 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.51000 REMARK 3 B22 (A**2) : -0.51000 REMARK 3 B33 (A**2) : 1.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.070 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.063 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4198 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3835 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5727 ; 1.162 ; 1.929 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8801 ; 0.773 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 550 ; 5.671 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 168 ;36.606 ;25.238 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 601 ;10.123 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;18.697 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 664 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4940 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1014 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2193 ; 0.404 ; 0.735 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2190 ; 0.403 ; 0.734 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2744 ; 0.714 ; 1.101 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2745 ; 0.714 ; 1.102 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2003 ; 0.464 ; 0.739 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2004 ; 0.464 ; 0.739 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2984 ; 0.767 ; 1.096 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4894 ; 2.295 ; 6.283 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4777 ; 2.019 ; 5.982 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4RL3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087480. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NUMERICAL LINK TYPE SI(111) REMARK 200 DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 LUQID NITROGEN COOLING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70282 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 71.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 68.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.09600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 32.86 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3SIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM ACETATE TETRAHYDRATE, REMARK 280 20% W/V POLYETHYLENE GLYCOL 3350, PH 7.9, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.31300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 39.31300 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.70000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.31300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.85000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.31300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 125.55000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.31300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.31300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 83.70000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 39.31300 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 125.55000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 39.31300 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 41.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 124 REMARK 465 MET B 124 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 382 -132.31 50.26 REMARK 500 LYS B 382 -133.24 52.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 736 O REMARK 620 2 HOH A 737 O 89.3 REMARK 620 3 HOH A 738 O 90.7 92.3 REMARK 620 4 HOH A 739 O 90.3 91.1 176.5 REMARK 620 5 HOH A 740 O 93.0 177.2 89.4 87.2 REMARK 620 6 HOH A 741 O 177.5 90.5 86.7 92.3 87.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 404 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 733 O REMARK 620 2 HOH B 734 O 82.1 REMARK 620 3 HOH B 735 O 94.5 86.0 REMARK 620 4 HOH B 736 O 170.8 90.3 90.1 REMARK 620 5 HOH B 737 O 87.7 94.6 177.7 87.7 REMARK 620 6 HOH B 738 O 96.3 178.4 93.8 91.3 85.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PXV RELATED DB: PDB DBREF 4RL3 A 125 395 UNP Q0WYK2 Q0WYK2_9MONI 153 423 DBREF 4RL3 B 125 395 UNP Q0WYK2 Q0WYK2_9MONI 153 423 SEQADV 4RL3 MET A 124 UNP Q0WYK2 EXPRESSION TAG SEQADV 4RL3 MET B 124 UNP Q0WYK2 EXPRESSION TAG SEQRES 1 A 272 MET LYS VAL PHE ARG GLU TYR ILE GLY ALA LEU TYR ASN SEQRES 2 A 272 GLY VAL GLN PHE THR ASP VAL PRO ILE ASN SER GLY VAL SEQRES 3 A 272 THR PHE HIS PHE ILE LEU ALA PHE ALA ILE ASP TYR THR SEQRES 4 A 272 SER ALA ALA ALA ALA THR ASN GLY VAL PHE ASN ILE TYR SEQRES 5 A 272 TRP GLN ASN SER VAL LEU THR PRO ALA ALA VAL GLN ALA SEQRES 6 A 272 ILE LYS ALA GLN HIS SER ASN VAL LYS VAL MET VAL SER SEQRES 7 A 272 LEU GLY GLY ASP THR ILE SER GLY SER PRO VAL GLN PHE SEQRES 8 A 272 THR ALA THR SER VAL SER SER TRP VAL ALA ASN ALA VAL SEQRES 9 A 272 SER SER LEU THR SER LEU ILE ASN GLN TYR HIS LEU ASP SEQRES 10 A 272 GLY ILE ASP ILE ASP TYR GLU HIS PHE ASP GLN VAL SER SEQRES 11 A 272 THR SER THR PHE VAL SER CYS ILE GLY GLN LEU ILE THR SEQRES 12 A 272 GLN LEU LYS ALA ASN ASN VAL ILE SER VAL ALA SER ILE SEQRES 13 A 272 ALA PRO PHE ASP GLY VAL GLU SER GLN TYR THR ALA LEU SEQRES 14 A 272 PHE GLY GLN TYR SER SER VAL ILE ASP LEU VAL ASN PHE SEQRES 15 A 272 GLN PHE TYR SER TYR GLY ALA GLY THR SER ALA SER GLN SEQRES 16 A 272 TYR VAL SER LEU TYR ASN THR ALA ALA SER LYS TYR GLY SEQRES 17 A 272 GLY GLY ALA LYS VAL LEU ALA SER PHE SER THR GLY GLY SEQRES 18 A 272 VAL GLY PRO ALA PRO SER THR VAL LEU SER ALA CYS GLN SEQRES 19 A 272 GLN LEU LYS SER SER GLY THR LEU PRO GLY ILE PHE ILE SEQRES 20 A 272 PHE SER ALA ASP GLY SER TYR ALA SER SER ALA LYS PHE SEQRES 21 A 272 GLN TYR GLU GLN GLN ALA GLN THR LEU LEU THR SER SEQRES 1 B 272 MET LYS VAL PHE ARG GLU TYR ILE GLY ALA LEU TYR ASN SEQRES 2 B 272 GLY VAL GLN PHE THR ASP VAL PRO ILE ASN SER GLY VAL SEQRES 3 B 272 THR PHE HIS PHE ILE LEU ALA PHE ALA ILE ASP TYR THR SEQRES 4 B 272 SER ALA ALA ALA ALA THR ASN GLY VAL PHE ASN ILE TYR SEQRES 5 B 272 TRP GLN ASN SER VAL LEU THR PRO ALA ALA VAL GLN ALA SEQRES 6 B 272 ILE LYS ALA GLN HIS SER ASN VAL LYS VAL MET VAL SER SEQRES 7 B 272 LEU GLY GLY ASP THR ILE SER GLY SER PRO VAL GLN PHE SEQRES 8 B 272 THR ALA THR SER VAL SER SER TRP VAL ALA ASN ALA VAL SEQRES 9 B 272 SER SER LEU THR SER LEU ILE ASN GLN TYR HIS LEU ASP SEQRES 10 B 272 GLY ILE ASP ILE ASP TYR GLU HIS PHE ASP GLN VAL SER SEQRES 11 B 272 THR SER THR PHE VAL SER CYS ILE GLY GLN LEU ILE THR SEQRES 12 B 272 GLN LEU LYS ALA ASN ASN VAL ILE SER VAL ALA SER ILE SEQRES 13 B 272 ALA PRO PHE ASP GLY VAL GLU SER GLN TYR THR ALA LEU SEQRES 14 B 272 PHE GLY GLN TYR SER SER VAL ILE ASP LEU VAL ASN PHE SEQRES 15 B 272 GLN PHE TYR SER TYR GLY ALA GLY THR SER ALA SER GLN SEQRES 16 B 272 TYR VAL SER LEU TYR ASN THR ALA ALA SER LYS TYR GLY SEQRES 17 B 272 GLY GLY ALA LYS VAL LEU ALA SER PHE SER THR GLY GLY SEQRES 18 B 272 VAL GLY PRO ALA PRO SER THR VAL LEU SER ALA CYS GLN SEQRES 19 B 272 GLN LEU LYS SER SER GLY THR LEU PRO GLY ILE PHE ILE SEQRES 20 B 272 PHE SER ALA ASP GLY SER TYR ALA SER SER ALA LYS PHE SEQRES 21 B 272 GLN TYR GLU GLN GLN ALA GLN THR LEU LEU THR SER HET EDO A 401 4 HET EDO A 402 4 HET ACT A 403 4 HET MG A 404 1 HET EDO B 401 4 HET EDO B 402 4 HET ACT B 403 4 HET MG B 404 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETNAM MG MAGNESIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 4(C2 H6 O2) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 6 MG 2(MG 2+) FORMUL 11 HOH *528(H2 O) HELIX 1 1 GLN A 139 VAL A 143 5 5 HELIX 2 2 THR A 182 HIS A 193 1 12 HELIX 3 3 SER A 218 HIS A 238 1 21 HELIX 4 4 SER A 253 ASN A 271 1 19 HELIX 5 5 PHE A 282 GLY A 284 5 3 HELIX 6 6 VAL A 285 SER A 297 1 13 HELIX 7 7 SER A 298 ILE A 300 5 3 HELIX 8 8 GLN A 306 TYR A 310 5 5 HELIX 9 9 SER A 315 TYR A 330 1 16 HELIX 10 10 ALA A 348 SER A 362 1 15 HELIX 11 11 SER A 372 ALA A 378 1 7 HELIX 12 12 PHE A 383 SER A 395 1 13 HELIX 13 13 GLN B 139 VAL B 143 5 5 HELIX 14 14 THR B 182 HIS B 193 1 12 HELIX 15 15 SER B 218 HIS B 238 1 21 HELIX 16 16 SER B 253 ASN B 271 1 19 HELIX 17 17 PHE B 282 GLY B 284 5 3 HELIX 18 18 VAL B 285 SER B 297 1 13 HELIX 19 19 SER B 298 ILE B 300 5 3 HELIX 20 20 GLN B 306 TYR B 310 5 5 HELIX 21 21 SER B 315 TYR B 330 1 16 HELIX 22 22 ALA B 348 SER B 362 1 15 HELIX 23 23 SER B 372 SER B 379 1 8 HELIX 24 24 PHE B 383 SER B 395 1 13 SHEET 1 A 6 ASN A 173 ILE A 174 0 SHEET 2 A 6 THR A 150 ILE A 159 -1 N ILE A 159 O ASN A 173 SHEET 3 A 6 VAL A 196 GLY A 204 1 O SER A 201 N LEU A 155 SHEET 4 A 6 GLY A 241 TYR A 246 1 O ASP A 243 N LEU A 202 SHEET 5 A 6 VAL A 276 ILE A 279 1 O SER A 278 N ILE A 244 SHEET 6 A 6 LEU A 302 VAL A 303 1 N LEU A 302 O ALA A 277 SHEET 1 B 5 ASN A 173 ILE A 174 0 SHEET 2 B 5 THR A 150 ILE A 159 -1 N ILE A 159 O ASN A 173 SHEET 3 B 5 VAL A 126 ILE A 131 1 N PHE A 127 O THR A 150 SHEET 4 B 5 GLY A 367 PHE A 371 1 O ILE A 370 N ARG A 128 SHEET 5 B 5 ALA A 338 SER A 341 1 N ALA A 338 O PHE A 369 SHEET 1 C 2 THR A 206 ILE A 207 0 SHEET 2 C 2 SER A 210 PRO A 211 -1 O SER A 210 N ILE A 207 SHEET 1 D 6 ASN B 173 ILE B 174 0 SHEET 2 D 6 THR B 150 ILE B 159 -1 N ILE B 159 O ASN B 173 SHEET 3 D 6 VAL B 196 GLY B 204 1 O SER B 201 N LEU B 155 SHEET 4 D 6 GLY B 241 TYR B 246 1 O ASP B 243 N LEU B 202 SHEET 5 D 6 VAL B 276 ILE B 279 1 O SER B 278 N ILE B 244 SHEET 6 D 6 LEU B 302 VAL B 303 1 N LEU B 302 O ALA B 277 SHEET 1 E 5 ASN B 173 ILE B 174 0 SHEET 2 E 5 THR B 150 ILE B 159 -1 N ILE B 159 O ASN B 173 SHEET 3 E 5 VAL B 126 ILE B 131 1 N PHE B 127 O THR B 150 SHEET 4 E 5 GLY B 367 PHE B 371 1 O ILE B 370 N TYR B 130 SHEET 5 E 5 ALA B 338 SER B 341 1 N ALA B 338 O PHE B 369 SHEET 1 F 2 THR B 206 ILE B 207 0 SHEET 2 F 2 SER B 210 PRO B 211 -1 O SER B 210 N ILE B 207 LINK MG MG A 404 O HOH A 736 1555 1555 2.15 LINK MG MG A 404 O HOH A 737 1555 1555 2.03 LINK MG MG A 404 O HOH A 738 1555 1555 1.97 LINK MG MG A 404 O HOH A 739 1555 1555 2.04 LINK MG MG A 404 O HOH A 740 1555 1555 2.13 LINK MG MG A 404 O HOH A 741 1555 1555 2.02 LINK MG MG B 404 O HOH B 733 1555 1555 2.03 LINK MG MG B 404 O HOH B 734 1555 1555 2.04 LINK MG MG B 404 O HOH B 735 1555 1555 2.06 LINK MG MG B 404 O HOH B 736 1555 1555 1.97 LINK MG MG B 404 O HOH B 737 1555 1555 2.10 LINK MG MG B 404 O HOH B 738 1555 1555 2.09 CISPEP 1 ALA A 156 PHE A 157 0 5.25 CISPEP 2 PHE A 371 SER A 372 0 10.50 CISPEP 3 ALA B 156 PHE B 157 0 6.46 CISPEP 4 PHE B 371 SER B 372 0 13.62 SITE 1 AC1 8 ILE A 131 GLY A 132 ALA A 133 LEU A 134 SITE 2 AC1 8 PHE A 371 SER A 372 ASP A 374 HOH A 705 SITE 1 AC2 6 LYS A 269 SER A 275 SER A 298 VAL A 299 SITE 2 AC2 6 ASP A 301 HOH A 668 SITE 1 AC3 7 TYR A 130 ASP A 245 GLN A 306 TYR A 308 SITE 2 AC3 7 PHE A 371 HOH A 737 HOH A 738 SITE 1 AC4 6 HOH A 736 HOH A 737 HOH A 738 HOH A 739 SITE 2 AC4 6 HOH A 740 HOH A 741 SITE 1 AC5 8 ILE B 131 GLY B 132 ALA B 133 LEU B 134 SITE 2 AC5 8 PHE B 371 SER B 372 ASP B 374 HOH B 638 SITE 1 AC6 6 LYS B 269 SER B 275 SER B 298 VAL B 299 SITE 2 AC6 6 ASP B 301 HOH B 652 SITE 1 AC7 7 TYR B 130 ASP B 245 GLN B 306 TYR B 308 SITE 2 AC7 7 PHE B 371 HOH B 733 HOH B 737 SITE 1 AC8 6 HOH B 733 HOH B 734 HOH B 735 HOH B 736 SITE 2 AC8 6 HOH B 737 HOH B 738 CRYST1 78.626 78.626 167.400 90.00 90.00 90.00 I 41 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012718 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012718 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005974 0.00000