data_4RLE # _entry.id 4RLE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RLE pdb_00004rle 10.2210/pdb4rle/pdb RCSB RCSB087490 ? ? WWPDB D_1000087490 ? ? # _pdbx_database_status.entry_id 4RLE _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-10-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dickmanns, A.' 1 'Neumann, P.' 2 'Ficner, R.' 3 # _citation.id primary _citation.title 'Identification, Characterization, and Structure Analysis of the Cyclic di-AMP-binding PII-like Signal Transduction Protein DarA.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 290 _citation.page_first 3069 _citation.page_last 3080 _citation.year 2015 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25433025 _citation.pdbx_database_id_DOI 10.1074/jbc.M114.619619 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gundlach, J.' 1 ? primary 'Dickmanns, A.' 2 ? primary 'Schroder-Tittmann, K.' 3 ? primary 'Neumann, P.' 4 ? primary 'Kaesler, J.' 5 ? primary 'Kampf, J.' 6 ? primary 'Herzberg, C.' 7 ? primary 'Hammer, E.' 8 ? primary 'Schwede, F.' 9 ? primary 'Kaever, V.' 10 ? primary 'Tittmann, K.' 11 ? primary 'Stulke, J.' 12 ? primary 'Ficner, R.' 13 ? # _cell.length_a 56.521 _cell.length_b 56.521 _cell.length_c 58.201 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4RLE _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 63' _symmetry.entry_id 4RLE _symmetry.Int_Tables_number 173 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein YaaQ' 12952.741 1 ? ? ? ? 2 non-polymer syn ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 658.412 1 ? ? ? ? 3 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 4 water nat water 18.015 145 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name DarA # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HHHHHHGSMKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVEDIRVNKALSLIKENGQKRDQMIA PVSPMGGNADSYVPYPVEVEVGGATVFVLPVDEFHQF ; _entity_poly.pdbx_seq_one_letter_code_can ;HHHHHHGSMKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVEDIRVNKALSLIKENGQKRDQMIA PVSPMGGNADSYVPYPVEVEVGGATVFVLPVDEFHQF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 GLY n 1 8 SER n 1 9 MET n 1 10 LYS n 1 11 LEU n 1 12 ILE n 1 13 VAL n 1 14 ALA n 1 15 VAL n 1 16 VAL n 1 17 GLN n 1 18 ASP n 1 19 GLN n 1 20 ASP n 1 21 SER n 1 22 ASN n 1 23 ARG n 1 24 LEU n 1 25 LEU n 1 26 LYS n 1 27 THR n 1 28 LEU n 1 29 THR n 1 30 ASP n 1 31 HIS n 1 32 ASN n 1 33 PHE n 1 34 ARG n 1 35 VAL n 1 36 THR n 1 37 LYS n 1 38 LEU n 1 39 ALA n 1 40 THR n 1 41 THR n 1 42 GLY n 1 43 GLY n 1 44 PHE n 1 45 LEU n 1 46 LYS n 1 47 SER n 1 48 GLY n 1 49 ASN n 1 50 THR n 1 51 THR n 1 52 PHE n 1 53 MET n 1 54 ILE n 1 55 GLY n 1 56 VAL n 1 57 GLU n 1 58 ASP n 1 59 ILE n 1 60 ARG n 1 61 VAL n 1 62 ASN n 1 63 LYS n 1 64 ALA n 1 65 LEU n 1 66 SER n 1 67 LEU n 1 68 ILE n 1 69 LYS n 1 70 GLU n 1 71 ASN n 1 72 GLY n 1 73 GLN n 1 74 LYS n 1 75 ARG n 1 76 ASP n 1 77 GLN n 1 78 MET n 1 79 ILE n 1 80 ALA n 1 81 PRO n 1 82 VAL n 1 83 SER n 1 84 PRO n 1 85 MET n 1 86 GLY n 1 87 GLY n 1 88 ASN n 1 89 ALA n 1 90 ASP n 1 91 SER n 1 92 TYR n 1 93 VAL n 1 94 PRO n 1 95 TYR n 1 96 PRO n 1 97 VAL n 1 98 GLU n 1 99 VAL n 1 100 GLU n 1 101 VAL n 1 102 GLY n 1 103 GLY n 1 104 ALA n 1 105 THR n 1 106 VAL n 1 107 PHE n 1 108 VAL n 1 109 LEU n 1 110 PRO n 1 111 VAL n 1 112 ASP n 1 113 GLU n 1 114 PHE n 1 115 HIS n 1 116 GLN n 1 117 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BSU00290, yaaQ' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 168 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pWH844 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YAAQ_BACSU _struct_ref.pdbx_db_accession P37538 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVEDIRVNKALSLIKENGQKRDQMIAPVSPMGGN ADSYVPYPVEVEVGGATVFVLPVDEFHQF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4RLE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 9 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 117 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P37538 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 109 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 109 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RLE HIS A 1 ? UNP P37538 ? ? 'expression tag' -7 1 1 4RLE HIS A 2 ? UNP P37538 ? ? 'expression tag' -6 2 1 4RLE HIS A 3 ? UNP P37538 ? ? 'expression tag' -5 3 1 4RLE HIS A 4 ? UNP P37538 ? ? 'expression tag' -4 4 1 4RLE HIS A 5 ? UNP P37538 ? ? 'expression tag' -3 5 1 4RLE HIS A 6 ? UNP P37538 ? ? 'expression tag' -2 6 1 4RLE GLY A 7 ? UNP P37538 ? ? 'expression tag' -1 7 1 4RLE SER A 8 ? UNP P37538 ? ? 'expression tag' 0 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2BA non-polymer . ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; "bis-(3',5')-cyclic-dimeric-Adenosine-monophosphate" 'C20 H24 N10 O12 P2' 658.412 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4RLE _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 292 _exptl_crystal_grow.pdbx_details '0.1-0.2 M sodium tartrate, 16-20% PEG5000, 10 mM DTT, vapor diffusion, sitting drop, temperature 292K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range 7.0-8.0 _exptl_crystal_grow.pH ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.details mirrors _diffrn_detector.pdbx_collection_date 2014-05-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9100 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_wavelength_list 0.9100 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 # _reflns.d_resolution_high 1.300 _reflns.number_obs 26017 _reflns.pdbx_Rmerge_I_obs 0.025 _reflns.pdbx_netI_over_sigmaI 38.860 _reflns.pdbx_chi_squared 0.977 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_I -3.000 _reflns.B_iso_Wilson_estimate 14.050 _reflns.entry_id 4RLE _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 37.461 _reflns.number_all 26017 _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 6.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_Rrim_I_all 1.300 1.350 17632 ? 2789 0.176 10.490 ? ? ? ? ? 100.000 1 1 ? ? ? 1.350 1.400 15111 ? 2377 0.126 14.250 ? ? ? ? ? 100.000 2 1 ? ? ? 1.400 1.500 23846 ? 3875 0.092 18.380 ? ? ? ? ? 100.000 3 1 ? ? ? 1.500 2.660 93871 ? 13886 0.027 46.110 ? ? ? ? ? 100.000 4 1 ? ? ? 2.660 3.240 9256 ? 1377 0.020 75.510 ? ? ? ? ? 99.600 5 1 ? ? ? 3.240 3.820 3767 ? 656 0.020 74.200 ? ? ? ? ? 100.000 6 1 ? ? ? 3.820 4.400 2486 ? 360 0.022 83.500 ? ? ? ? ? 99.700 7 1 ? ? ? 4.400 14.000 4786 ? 675 0.025 77.440 ? ? ? ? ? 99.700 8 1 ? ? ? 14.000 17.000 46 ? 8 0.018 70.920 ? ? ? ? ? 88.900 9 1 ? ? ? 17.000 ? 52 ? 14 0.016 55.610 ? ? ? ? ? 93.300 10 1 ? ? ? # _refine.entry_id 4RLE _refine.ls_d_res_high 1.3000 _refine.ls_d_res_low 37.4610 _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.9300 _refine.ls_number_reflns_obs 26015 _refine.ls_number_reflns_all 26017 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_obs 0.1305 _refine.ls_R_factor_R_work 0.1296 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1545 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 3.5000 _refine.ls_number_reflns_R_free 911 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 37.0171 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.0700 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3M05' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 326.400 _refine.B_iso_min 9.170 _refine.pdbx_overall_phase_error 15.4400 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_R_factor_all ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4RLE _refine_analyze.Luzzati_coordinate_error_obs 0.07 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 901 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 1091 _refine_hist.d_res_high 1.3000 _refine_hist.d_res_low 37.4610 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1092 0.009 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1500 1.469 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 168 0.054 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 192 0.008 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 454 18.624 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_obs 1.3000 1.3686 7 100.0000 3575 . 0.1167 0.1739 . 130 . 3705 . . 'X-RAY DIFFRACTION' . 1.3686 1.4543 7 100.0000 3564 . 0.1088 0.1598 . 129 . 3693 . . 'X-RAY DIFFRACTION' . 1.4543 1.5666 7 100.0000 3573 . 0.1017 0.1531 . 129 . 3702 . . 'X-RAY DIFFRACTION' . 1.5666 1.7242 7 100.0000 3601 . 0.1030 0.1586 . 131 . 3732 . . 'X-RAY DIFFRACTION' . 1.7242 1.9737 7 100.0000 3564 . 0.1136 0.1416 . 129 . 3693 . . 'X-RAY DIFFRACTION' . 1.9737 2.4866 7 100.0000 3589 . 0.1417 0.1440 . 131 . 3720 . . 'X-RAY DIFFRACTION' . 2.4866 37.4768 7 100.0000 3638 . 0.1406 0.1604 . 132 . 3770 . . 'X-RAY DIFFRACTION' . # _struct.entry_id 4RLE _struct.title 'Crystal structure of the c-di-AMP binding PII-like protein DarA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RLE _struct_keywords.text 'PII-like, cdiAMP, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 17 ? HIS A 31 ? GLN A 9 HIS A 23 1 ? 15 HELX_P HELX_P2 2 ARG A 60 ? GLY A 72 ? ARG A 52 GLY A 64 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 4 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS -4 A NI 202 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc2 metalc ? ? A HIS 6 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS -2 A NI 202 1_555 ? ? ? ? ? ? ? 2.193 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 36 ? THR A 41 ? THR A 28 THR A 33 A 2 GLY A 48 ? GLU A 57 ? GLY A 40 GLU A 49 A 3 MET A 9 ? VAL A 16 ? MET A 1 VAL A 8 A 4 ALA A 104 ? PRO A 110 ? ALA A 96 PRO A 102 B 1 ARG A 75 ? MET A 78 ? ARG A 67 MET A 70 B 2 GLU A 98 ? VAL A 101 ? GLU A 90 VAL A 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 38 ? N LEU A 30 O THR A 51 ? O THR A 43 A 2 3 O THR A 50 ? O THR A 42 N VAL A 16 ? N VAL A 8 A 3 4 N VAL A 15 ? N VAL A 7 O THR A 105 ? O THR A 97 B 1 2 N ARG A 75 ? N ARG A 67 O VAL A 101 ? O VAL A 93 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 2BA 201 ? 23 'BINDING SITE FOR RESIDUE 2BA A 201' AC2 Software A NI 202 ? 6 'BINDING SITE FOR RESIDUE NI A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 VAL A 15 ? VAL A 7 . ? 3_565 ? 2 AC1 23 THR A 29 ? THR A 21 . ? 1_555 ? 3 AC1 23 ASN A 32 ? ASN A 24 . ? 1_555 ? 4 AC1 23 PHE A 33 ? PHE A 25 . ? 1_555 ? 5 AC1 23 ARG A 34 ? ARG A 26 . ? 1_555 ? 6 AC1 23 VAL A 35 ? VAL A 27 . ? 1_555 ? 7 AC1 23 THR A 36 ? THR A 28 . ? 1_555 ? 8 AC1 23 GLY A 42 ? GLY A 34 . ? 3_565 ? 9 AC1 23 GLY A 43 ? GLY A 35 . ? 3_565 ? 10 AC1 23 PHE A 44 ? PHE A 36 . ? 3_565 ? 11 AC1 23 LEU A 45 ? LEU A 37 . ? 3_565 ? 12 AC1 23 ASN A 49 ? ASN A 41 . ? 3_565 ? 13 AC1 23 MET A 53 ? MET A 45 . ? 1_555 ? 14 AC1 23 GLY A 55 ? GLY A 47 . ? 1_555 ? 15 AC1 23 VAL A 99 ? VAL A 91 . ? 3_565 ? 16 AC1 23 GLU A 100 ? GLU A 92 . ? 3_565 ? 17 AC1 23 GLY A 102 ? GLY A 94 . ? 3_565 ? 18 AC1 23 THR A 105 ? THR A 97 . ? 3_565 ? 19 AC1 23 HOH D . ? HOH A 302 . ? 1_555 ? 20 AC1 23 HOH D . ? HOH A 304 . ? 1_555 ? 21 AC1 23 HOH D . ? HOH A 328 . ? 1_555 ? 22 AC1 23 HOH D . ? HOH A 416 . ? 1_555 ? 23 AC1 23 HOH D . ? HOH A 417 . ? 1_555 ? 24 AC2 6 HIS A 6 ? HIS A -2 . ? 2_665 ? 25 AC2 6 HIS A 4 ? HIS A -4 . ? 2_665 ? 26 AC2 6 HIS A 4 ? HIS A -4 . ? 3_565 ? 27 AC2 6 HIS A 6 ? HIS A -2 . ? 1_555 ? 28 AC2 6 HIS A 6 ? HIS A -2 . ? 3_565 ? 29 AC2 6 HIS A 4 ? HIS A -4 . ? 1_555 ? # _atom_sites.entry_id 4RLE _atom_sites.fract_transf_matrix[1][1] 0.017693 _atom_sites.fract_transf_matrix[1][2] 0.010215 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020430 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017182 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 -7 ? ? ? A . n A 1 2 HIS 2 -6 -6 HIS HIS A . n A 1 3 HIS 3 -5 -5 HIS HIS A . n A 1 4 HIS 4 -4 -4 HIS HIS A . n A 1 5 HIS 5 -3 -3 HIS HIS A . n A 1 6 HIS 6 -2 -2 HIS HIS A . n A 1 7 GLY 7 -1 -1 GLY GLY A . n A 1 8 SER 8 0 0 SER SER A . n A 1 9 MET 9 1 1 MET MET A . n A 1 10 LYS 10 2 2 LYS LYS A . n A 1 11 LEU 11 3 3 LEU LEU A . n A 1 12 ILE 12 4 4 ILE ILE A . n A 1 13 VAL 13 5 5 VAL VAL A . n A 1 14 ALA 14 6 6 ALA ALA A . n A 1 15 VAL 15 7 7 VAL VAL A . n A 1 16 VAL 16 8 8 VAL VAL A . n A 1 17 GLN 17 9 9 GLN GLN A . n A 1 18 ASP 18 10 10 ASP ASP A . n A 1 19 GLN 19 11 11 GLN GLN A . n A 1 20 ASP 20 12 12 ASP ASP A . n A 1 21 SER 21 13 13 SER SER A . n A 1 22 ASN 22 14 14 ASN ASN A . n A 1 23 ARG 23 15 15 ARG ARG A . n A 1 24 LEU 24 16 16 LEU LEU A . n A 1 25 LEU 25 17 17 LEU LEU A . n A 1 26 LYS 26 18 18 LYS LYS A . n A 1 27 THR 27 19 19 THR THR A . n A 1 28 LEU 28 20 20 LEU LEU A . n A 1 29 THR 29 21 21 THR THR A . n A 1 30 ASP 30 22 22 ASP ASP A . n A 1 31 HIS 31 23 23 HIS HIS A . n A 1 32 ASN 32 24 24 ASN ASN A . n A 1 33 PHE 33 25 25 PHE PHE A . n A 1 34 ARG 34 26 26 ARG ARG A . n A 1 35 VAL 35 27 27 VAL VAL A . n A 1 36 THR 36 28 28 THR THR A . n A 1 37 LYS 37 29 29 LYS LYS A . n A 1 38 LEU 38 30 30 LEU LEU A . n A 1 39 ALA 39 31 31 ALA ALA A . n A 1 40 THR 40 32 32 THR THR A . n A 1 41 THR 41 33 33 THR THR A . n A 1 42 GLY 42 34 34 GLY GLY A . n A 1 43 GLY 43 35 35 GLY GLY A . n A 1 44 PHE 44 36 36 PHE PHE A . n A 1 45 LEU 45 37 37 LEU LEU A . n A 1 46 LYS 46 38 38 LYS LYS A . n A 1 47 SER 47 39 39 SER SER A . n A 1 48 GLY 48 40 40 GLY GLY A . n A 1 49 ASN 49 41 41 ASN ASN A . n A 1 50 THR 50 42 42 THR THR A . n A 1 51 THR 51 43 43 THR THR A . n A 1 52 PHE 52 44 44 PHE PHE A . n A 1 53 MET 53 45 45 MET MET A . n A 1 54 ILE 54 46 46 ILE ILE A . n A 1 55 GLY 55 47 47 GLY GLY A . n A 1 56 VAL 56 48 48 VAL VAL A . n A 1 57 GLU 57 49 49 GLU GLU A . n A 1 58 ASP 58 50 50 ASP ASP A . n A 1 59 ILE 59 51 51 ILE ILE A . n A 1 60 ARG 60 52 52 ARG ARG A . n A 1 61 VAL 61 53 53 VAL VAL A . n A 1 62 ASN 62 54 54 ASN ASN A . n A 1 63 LYS 63 55 55 LYS LYS A . n A 1 64 ALA 64 56 56 ALA ALA A . n A 1 65 LEU 65 57 57 LEU LEU A . n A 1 66 SER 66 58 58 SER SER A . n A 1 67 LEU 67 59 59 LEU LEU A . n A 1 68 ILE 68 60 60 ILE ILE A . n A 1 69 LYS 69 61 61 LYS LYS A . n A 1 70 GLU 70 62 62 GLU GLU A . n A 1 71 ASN 71 63 63 ASN ASN A . n A 1 72 GLY 72 64 64 GLY GLY A . n A 1 73 GLN 73 65 65 GLN GLN A . n A 1 74 LYS 74 66 66 LYS LYS A . n A 1 75 ARG 75 67 67 ARG ARG A . n A 1 76 ASP 76 68 68 ASP ASP A . n A 1 77 GLN 77 69 69 GLN GLN A . n A 1 78 MET 78 70 70 MET MET A . n A 1 79 ILE 79 71 71 ILE ILE A . n A 1 80 ALA 80 72 72 ALA ALA A . n A 1 81 PRO 81 73 73 PRO PRO A . n A 1 82 VAL 82 74 74 VAL VAL A . n A 1 83 SER 83 75 75 SER SER A . n A 1 84 PRO 84 76 76 PRO PRO A . n A 1 85 MET 85 77 77 MET MET A . n A 1 86 GLY 86 78 78 GLY GLY A . n A 1 87 GLY 87 79 79 GLY GLY A . n A 1 88 ASN 88 80 80 ASN ASN A . n A 1 89 ALA 89 81 81 ALA ALA A . n A 1 90 ASP 90 82 82 ASP ASP A . n A 1 91 SER 91 83 83 SER SER A . n A 1 92 TYR 92 84 84 TYR TYR A . n A 1 93 VAL 93 85 85 VAL VAL A . n A 1 94 PRO 94 86 86 PRO PRO A . n A 1 95 TYR 95 87 87 TYR TYR A . n A 1 96 PRO 96 88 88 PRO PRO A . n A 1 97 VAL 97 89 89 VAL VAL A . n A 1 98 GLU 98 90 90 GLU GLU A . n A 1 99 VAL 99 91 91 VAL VAL A . n A 1 100 GLU 100 92 92 GLU GLU A . n A 1 101 VAL 101 93 93 VAL VAL A . n A 1 102 GLY 102 94 94 GLY GLY A . n A 1 103 GLY 103 95 95 GLY GLY A . n A 1 104 ALA 104 96 96 ALA ALA A . n A 1 105 THR 105 97 97 THR THR A . n A 1 106 VAL 106 98 98 VAL VAL A . n A 1 107 PHE 107 99 99 PHE PHE A . n A 1 108 VAL 108 100 100 VAL VAL A . n A 1 109 LEU 109 101 101 LEU LEU A . n A 1 110 PRO 110 102 102 PRO PRO A . n A 1 111 VAL 111 103 103 VAL VAL A . n A 1 112 ASP 112 104 104 ASP ASP A . n A 1 113 GLU 113 105 105 GLU GLU A . n A 1 114 PHE 114 106 106 PHE PHE A . n A 1 115 HIS 115 107 107 HIS HIS A . n A 1 116 GLN 116 108 108 GLN GLN A . n A 1 117 PHE 117 109 109 PHE PHE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2BA 1 201 1 2BA 2BA A . C 3 NI 1 202 1001 NI NI A . D 4 HOH 1 301 1 HOH HOH A . D 4 HOH 2 302 2 HOH HOH A . D 4 HOH 3 303 3 HOH HOH A . D 4 HOH 4 304 4 HOH HOH A . D 4 HOH 5 305 5 HOH HOH A . D 4 HOH 6 306 6 HOH HOH A . D 4 HOH 7 307 7 HOH HOH A . D 4 HOH 8 308 8 HOH HOH A . D 4 HOH 9 309 9 HOH HOH A . D 4 HOH 10 310 10 HOH HOH A . D 4 HOH 11 311 11 HOH HOH A . D 4 HOH 12 312 12 HOH HOH A . D 4 HOH 13 313 13 HOH HOH A . D 4 HOH 14 314 14 HOH HOH A . D 4 HOH 15 315 15 HOH HOH A . D 4 HOH 16 316 16 HOH HOH A . D 4 HOH 17 317 17 HOH HOH A . D 4 HOH 18 318 18 HOH HOH A . D 4 HOH 19 319 19 HOH HOH A . D 4 HOH 20 320 20 HOH HOH A . D 4 HOH 21 321 21 HOH HOH A . D 4 HOH 22 322 22 HOH HOH A . D 4 HOH 23 323 23 HOH HOH A . D 4 HOH 24 324 24 HOH HOH A . D 4 HOH 25 325 25 HOH HOH A . D 4 HOH 26 326 26 HOH HOH A . D 4 HOH 27 327 27 HOH HOH A . D 4 HOH 28 328 28 HOH HOH A . D 4 HOH 29 329 29 HOH HOH A . D 4 HOH 30 330 30 HOH HOH A . D 4 HOH 31 331 31 HOH HOH A . D 4 HOH 32 332 32 HOH HOH A . D 4 HOH 33 333 33 HOH HOH A . D 4 HOH 34 334 34 HOH HOH A . D 4 HOH 35 335 35 HOH HOH A . D 4 HOH 36 336 36 HOH HOH A . D 4 HOH 37 337 37 HOH HOH A . D 4 HOH 38 338 38 HOH HOH A . D 4 HOH 39 339 39 HOH HOH A . D 4 HOH 40 340 40 HOH HOH A . D 4 HOH 41 341 41 HOH HOH A . D 4 HOH 42 342 42 HOH HOH A . D 4 HOH 43 343 43 HOH HOH A . D 4 HOH 44 344 44 HOH HOH A . D 4 HOH 45 345 45 HOH HOH A . D 4 HOH 46 346 46 HOH HOH A . D 4 HOH 47 347 47 HOH HOH A . D 4 HOH 48 348 48 HOH HOH A . D 4 HOH 49 349 49 HOH HOH A . D 4 HOH 50 350 50 HOH HOH A . D 4 HOH 51 351 51 HOH HOH A . D 4 HOH 52 352 52 HOH HOH A . D 4 HOH 53 353 53 HOH HOH A . D 4 HOH 54 354 55 HOH HOH A . D 4 HOH 55 355 56 HOH HOH A . D 4 HOH 56 356 57 HOH HOH A . D 4 HOH 57 357 58 HOH HOH A . D 4 HOH 58 358 59 HOH HOH A . D 4 HOH 59 359 60 HOH HOH A . D 4 HOH 60 360 61 HOH HOH A . D 4 HOH 61 361 62 HOH HOH A . D 4 HOH 62 362 63 HOH HOH A . D 4 HOH 63 363 65 HOH HOH A . D 4 HOH 64 364 66 HOH HOH A . D 4 HOH 65 365 67 HOH HOH A . D 4 HOH 66 366 68 HOH HOH A . D 4 HOH 67 367 69 HOH HOH A . D 4 HOH 68 368 70 HOH HOH A . D 4 HOH 69 369 71 HOH HOH A . D 4 HOH 70 370 72 HOH HOH A . D 4 HOH 71 371 73 HOH HOH A . D 4 HOH 72 372 74 HOH HOH A . D 4 HOH 73 373 75 HOH HOH A . D 4 HOH 74 374 76 HOH HOH A . D 4 HOH 75 375 77 HOH HOH A . D 4 HOH 76 376 78 HOH HOH A . D 4 HOH 77 377 79 HOH HOH A . D 4 HOH 78 378 80 HOH HOH A . D 4 HOH 79 379 82 HOH HOH A . D 4 HOH 80 380 83 HOH HOH A . D 4 HOH 81 381 84 HOH HOH A . D 4 HOH 82 382 85 HOH HOH A . D 4 HOH 83 383 86 HOH HOH A . D 4 HOH 84 384 87 HOH HOH A . D 4 HOH 85 385 88 HOH HOH A . D 4 HOH 86 386 89 HOH HOH A . D 4 HOH 87 387 90 HOH HOH A . D 4 HOH 88 388 91 HOH HOH A . D 4 HOH 89 389 92 HOH HOH A . D 4 HOH 90 390 93 HOH HOH A . D 4 HOH 91 391 94 HOH HOH A . D 4 HOH 92 392 95 HOH HOH A . D 4 HOH 93 393 96 HOH HOH A . D 4 HOH 94 394 97 HOH HOH A . D 4 HOH 95 395 98 HOH HOH A . D 4 HOH 96 396 99 HOH HOH A . D 4 HOH 97 397 101 HOH HOH A . D 4 HOH 98 398 102 HOH HOH A . D 4 HOH 99 399 103 HOH HOH A . D 4 HOH 100 400 105 HOH HOH A . D 4 HOH 101 401 107 HOH HOH A . D 4 HOH 102 402 108 HOH HOH A . D 4 HOH 103 403 109 HOH HOH A . D 4 HOH 104 404 110 HOH HOH A . D 4 HOH 105 405 111 HOH HOH A . D 4 HOH 106 406 113 HOH HOH A . D 4 HOH 107 407 114 HOH HOH A . D 4 HOH 108 408 115 HOH HOH A . D 4 HOH 109 409 117 HOH HOH A . D 4 HOH 110 410 118 HOH HOH A . D 4 HOH 111 411 119 HOH HOH A . D 4 HOH 112 412 120 HOH HOH A . D 4 HOH 113 413 122 HOH HOH A . D 4 HOH 114 414 123 HOH HOH A . D 4 HOH 115 415 125 HOH HOH A . D 4 HOH 116 416 126 HOH HOH A . D 4 HOH 117 417 128 HOH HOH A . D 4 HOH 118 418 129 HOH HOH A . D 4 HOH 119 419 131 HOH HOH A . D 4 HOH 120 420 132 HOH HOH A . D 4 HOH 121 421 133 HOH HOH A . D 4 HOH 122 422 134 HOH HOH A . D 4 HOH 123 423 137 HOH HOH A . D 4 HOH 124 424 139 HOH HOH A . D 4 HOH 125 425 142 HOH HOH A . D 4 HOH 126 426 143 HOH HOH A . D 4 HOH 127 427 144 HOH HOH A . D 4 HOH 128 428 145 HOH HOH A . D 4 HOH 129 429 146 HOH HOH A . D 4 HOH 130 430 147 HOH HOH A . D 4 HOH 131 431 148 HOH HOH A . D 4 HOH 132 432 149 HOH HOH A . D 4 HOH 133 433 150 HOH HOH A . D 4 HOH 134 434 151 HOH HOH A . D 4 HOH 135 435 153 HOH HOH A . D 4 HOH 136 436 154 HOH HOH A . D 4 HOH 137 437 159 HOH HOH A . D 4 HOH 138 438 160 HOH HOH A . D 4 HOH 139 439 161 HOH HOH A . D 4 HOH 140 440 162 HOH HOH A . D 4 HOH 141 441 163 HOH HOH A . D 4 HOH 142 442 165 HOH HOH A . D 4 HOH 143 443 166 HOH HOH A . D 4 HOH 144 444 167 HOH HOH A . D 4 HOH 145 445 169 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7810 ? 1 MORE -77 ? 1 'SSA (A^2)' 17710 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 28.2605000000 0.8660254038 -0.5000000000 0.0000000000 48.9486218473 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -28.2605000000 -0.8660254038 -0.5000000000 0.0000000000 48.9486218473 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A NI 202 ? C NI . 2 1 A HOH 354 ? D HOH . 3 1 A HOH 369 ? D HOH . 4 1 A HOH 405 ? D HOH . 5 1 A HOH 419 ? D HOH . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id HIS _pdbx_struct_conn_angle.ptnr1_label_seq_id 4 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr1_auth_seq_id -4 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NI _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id C _pdbx_struct_conn_angle.ptnr2_label_comp_id NI _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id NI _pdbx_struct_conn_angle.ptnr2_auth_seq_id 202 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id NE2 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id HIS _pdbx_struct_conn_angle.ptnr3_label_seq_id 6 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr3_auth_seq_id -2 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 91.7 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-03 2 'Structure model' 1 1 2014-12-17 3 'Structure model' 1 2 2015-02-11 4 'Structure model' 1 3 2019-09-04 5 'Structure model' 1 4 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' reflns 2 5 'Structure model' chem_comp 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' entity 7 5 'Structure model' pdbx_entity_nonpoly 8 5 'Structure model' pdbx_initial_refinement_model 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_reflns.pdbx_Rsym_value' 2 5 'Structure model' '_chem_comp.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_entity.pdbx_description' 6 5 'Structure model' '_pdbx_entity_nonpoly.name' 7 5 'Structure model' '_struct_ref_seq_dif.details' 8 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -0.963 _pdbx_refine_tls.origin_y 5.402 _pdbx_refine_tls.origin_z 108.046 _pdbx_refine_tls.T[1][1] 1.0871 _pdbx_refine_tls.T[2][2] 0.3752 _pdbx_refine_tls.T[3][3] 1.3349 _pdbx_refine_tls.T[1][2] 0.4224 _pdbx_refine_tls.T[1][3] -0.2868 _pdbx_refine_tls.T[2][3] -0.0763 _pdbx_refine_tls.L[1][1] 3.1175 _pdbx_refine_tls.L[2][2] 1.7071 _pdbx_refine_tls.L[3][3] 9.6702 _pdbx_refine_tls.L[1][2] -0.0400 _pdbx_refine_tls.L[1][3] 4.5085 _pdbx_refine_tls.L[2][3] 2.0682 _pdbx_refine_tls.S[1][1] -1.9985 _pdbx_refine_tls.S[2][2] 1.0337 _pdbx_refine_tls.S[3][3] -2.1361 _pdbx_refine_tls.S[1][2] 3.4292 _pdbx_refine_tls.S[1][3] 1.2309 _pdbx_refine_tls.S[2][3] -1.4214 _pdbx_refine_tls.S[2][1] -0.9388 _pdbx_refine_tls.S[3][1] -2.6943 _pdbx_refine_tls.S[3][2] 2.1038 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 74 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 88 _pdbx_refine_tls_group.selection_details '( CHAIN A AND RESID 74:88 )' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.15 'July. 29, 2014' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 DNA . ? ? ? ? 'data collection' ? ? ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 PHASER . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 306 ? ? O A HOH 424 ? ? 2.10 2 1 OG A SER 39 ? A O A HOH 431 ? ? 2.13 3 1 O A MET 77 ? ? N A GLY 79 ? ? 2.16 4 1 O A HOH 443 ? ? O A HOH 444 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 85 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 86 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 86 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 133.92 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 14.62 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 84 ? ? -102.24 -128.93 2 1 VAL A 85 ? ? 35.81 90.06 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id HIS _pdbx_unobs_or_zero_occ_residues.auth_seq_id -7 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id HIS _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2BA P P N R 1 2BA O1P O N N 2 2BA O2P O N N 3 2BA "O5'" O N N 4 2BA "C5'" C N N 5 2BA "C4'" C N R 6 2BA "O4'" O N N 7 2BA "C3'" C N S 8 2BA "O3'" O N N 9 2BA "C2'" C N R 10 2BA "O2'" O N N 11 2BA "C1'" C N R 12 2BA N9 N Y N 13 2BA C8 C Y N 14 2BA N7 N Y N 15 2BA C5 C Y N 16 2BA C6 C Y N 17 2BA N6 N N N 18 2BA N1 N Y N 19 2BA C2 C Y N 20 2BA N3 N Y N 21 2BA C4 C Y N 22 2BA P1 P N R 23 2BA O1P1 O N N 24 2BA O2P1 O N N 25 2BA "O5'1" O N N 26 2BA "C5'1" C N N 27 2BA "C4'1" C N R 28 2BA "O4'1" O N N 29 2BA "C3'1" C N S 30 2BA "O3'1" O N N 31 2BA "C2'1" C N R 32 2BA "O2'1" O N N 33 2BA "C1'1" C N R 34 2BA N91 N Y N 35 2BA C81 C Y N 36 2BA N71 N Y N 37 2BA C51 C Y N 38 2BA C61 C Y N 39 2BA N61 N N N 40 2BA N11 N Y N 41 2BA C21 C Y N 42 2BA N31 N Y N 43 2BA C41 C Y N 44 2BA "H5'" H N N 45 2BA "H5'A" H N N 46 2BA "H4'" H N N 47 2BA "H3'" H N N 48 2BA "H2'" H N N 49 2BA "HO2'" H N N 50 2BA "H1'" H N N 51 2BA H8 H N N 52 2BA HN6 H N N 53 2BA HN6A H N N 54 2BA H2 H N N 55 2BA "HC5'" H N N 56 2BA HC5A H N N 57 2BA "HC4'" H N N 58 2BA "HC3'" H N N 59 2BA "HC2'" H N N 60 2BA HO2A H N N 61 2BA "HC1'" H N N 62 2BA HC8 H N N 63 2BA H1N6 H N N 64 2BA H1NA H N N 65 2BA HC2 H N N 66 2BA H2P H N N 67 2BA H2OP H N N 68 ALA N N N N 69 ALA CA C N S 70 ALA C C N N 71 ALA O O N N 72 ALA CB C N N 73 ALA OXT O N N 74 ALA H H N N 75 ALA H2 H N N 76 ALA HA H N N 77 ALA HB1 H N N 78 ALA HB2 H N N 79 ALA HB3 H N N 80 ALA HXT H N N 81 ARG N N N N 82 ARG CA C N S 83 ARG C C N N 84 ARG O O N N 85 ARG CB C N N 86 ARG CG C N N 87 ARG CD C N N 88 ARG NE N N N 89 ARG CZ C N N 90 ARG NH1 N N N 91 ARG NH2 N N N 92 ARG OXT O N N 93 ARG H H N N 94 ARG H2 H N N 95 ARG HA H N N 96 ARG HB2 H N N 97 ARG HB3 H N N 98 ARG HG2 H N N 99 ARG HG3 H N N 100 ARG HD2 H N N 101 ARG HD3 H N N 102 ARG HE H N N 103 ARG HH11 H N N 104 ARG HH12 H N N 105 ARG HH21 H N N 106 ARG HH22 H N N 107 ARG HXT H N N 108 ASN N N N N 109 ASN CA C N S 110 ASN C C N N 111 ASN O O N N 112 ASN CB C N N 113 ASN CG C N N 114 ASN OD1 O N N 115 ASN ND2 N N N 116 ASN OXT O N N 117 ASN H H N N 118 ASN H2 H N N 119 ASN HA H N N 120 ASN HB2 H N N 121 ASN HB3 H N N 122 ASN HD21 H N N 123 ASN HD22 H N N 124 ASN HXT H N N 125 ASP N N N N 126 ASP CA C N S 127 ASP C C N N 128 ASP O O N N 129 ASP CB C N N 130 ASP CG C N N 131 ASP OD1 O N N 132 ASP OD2 O N N 133 ASP OXT O N N 134 ASP H H N N 135 ASP H2 H N N 136 ASP HA H N N 137 ASP HB2 H N N 138 ASP HB3 H N N 139 ASP HD2 H N N 140 ASP HXT H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 HIS N N N N 191 HIS CA C N S 192 HIS C C N N 193 HIS O O N N 194 HIS CB C N N 195 HIS CG C Y N 196 HIS ND1 N Y N 197 HIS CD2 C Y N 198 HIS CE1 C Y N 199 HIS NE2 N Y N 200 HIS OXT O N N 201 HIS H H N N 202 HIS H2 H N N 203 HIS HA H N N 204 HIS HB2 H N N 205 HIS HB3 H N N 206 HIS HD1 H N N 207 HIS HD2 H N N 208 HIS HE1 H N N 209 HIS HE2 H N N 210 HIS HXT H N N 211 HOH O O N N 212 HOH H1 H N N 213 HOH H2 H N N 214 ILE N N N N 215 ILE CA C N S 216 ILE C C N N 217 ILE O O N N 218 ILE CB C N S 219 ILE CG1 C N N 220 ILE CG2 C N N 221 ILE CD1 C N N 222 ILE OXT O N N 223 ILE H H N N 224 ILE H2 H N N 225 ILE HA H N N 226 ILE HB H N N 227 ILE HG12 H N N 228 ILE HG13 H N N 229 ILE HG21 H N N 230 ILE HG22 H N N 231 ILE HG23 H N N 232 ILE HD11 H N N 233 ILE HD12 H N N 234 ILE HD13 H N N 235 ILE HXT H N N 236 LEU N N N N 237 LEU CA C N S 238 LEU C C N N 239 LEU O O N N 240 LEU CB C N N 241 LEU CG C N N 242 LEU CD1 C N N 243 LEU CD2 C N N 244 LEU OXT O N N 245 LEU H H N N 246 LEU H2 H N N 247 LEU HA H N N 248 LEU HB2 H N N 249 LEU HB3 H N N 250 LEU HG H N N 251 LEU HD11 H N N 252 LEU HD12 H N N 253 LEU HD13 H N N 254 LEU HD21 H N N 255 LEU HD22 H N N 256 LEU HD23 H N N 257 LEU HXT H N N 258 LYS N N N N 259 LYS CA C N S 260 LYS C C N N 261 LYS O O N N 262 LYS CB C N N 263 LYS CG C N N 264 LYS CD C N N 265 LYS CE C N N 266 LYS NZ N N N 267 LYS OXT O N N 268 LYS H H N N 269 LYS H2 H N N 270 LYS HA H N N 271 LYS HB2 H N N 272 LYS HB3 H N N 273 LYS HG2 H N N 274 LYS HG3 H N N 275 LYS HD2 H N N 276 LYS HD3 H N N 277 LYS HE2 H N N 278 LYS HE3 H N N 279 LYS HZ1 H N N 280 LYS HZ2 H N N 281 LYS HZ3 H N N 282 LYS HXT H N N 283 MET N N N N 284 MET CA C N S 285 MET C C N N 286 MET O O N N 287 MET CB C N N 288 MET CG C N N 289 MET SD S N N 290 MET CE C N N 291 MET OXT O N N 292 MET H H N N 293 MET H2 H N N 294 MET HA H N N 295 MET HB2 H N N 296 MET HB3 H N N 297 MET HG2 H N N 298 MET HG3 H N N 299 MET HE1 H N N 300 MET HE2 H N N 301 MET HE3 H N N 302 MET HXT H N N 303 NI NI NI N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2BA P O1P doub N N 1 2BA P O2P sing N N 2 2BA P "O5'" sing N N 3 2BA P "O3'1" sing N N 4 2BA "O5'" "C5'" sing N N 5 2BA "C5'" "C4'" sing N N 6 2BA "C4'" "O4'" sing N N 7 2BA "C4'" "C3'" sing N N 8 2BA "O4'" "C1'" sing N N 9 2BA "C3'" "O3'" sing N N 10 2BA "C3'" "C2'" sing N N 11 2BA "O3'" P1 sing N N 12 2BA "C2'" "O2'" sing N N 13 2BA "C2'" "C1'" sing N N 14 2BA "C1'" N9 sing N N 15 2BA N9 C8 sing Y N 16 2BA N9 C4 sing Y N 17 2BA C8 N7 doub Y N 18 2BA N7 C5 sing Y N 19 2BA C5 C6 doub Y N 20 2BA C5 C4 sing Y N 21 2BA C6 N6 sing N N 22 2BA C6 N1 sing Y N 23 2BA N1 C2 doub Y N 24 2BA C2 N3 sing Y N 25 2BA N3 C4 doub Y N 26 2BA P1 O1P1 doub N N 27 2BA P1 O2P1 sing N N 28 2BA P1 "O5'1" sing N N 29 2BA "O5'1" "C5'1" sing N N 30 2BA "C5'1" "C4'1" sing N N 31 2BA "C4'1" "O4'1" sing N N 32 2BA "C4'1" "C3'1" sing N N 33 2BA "O4'1" "C1'1" sing N N 34 2BA "C3'1" "O3'1" sing N N 35 2BA "C3'1" "C2'1" sing N N 36 2BA "C2'1" "O2'1" sing N N 37 2BA "C2'1" "C1'1" sing N N 38 2BA "C1'1" N91 sing N N 39 2BA N91 C81 sing Y N 40 2BA N91 C41 sing Y N 41 2BA C81 N71 doub Y N 42 2BA N71 C51 sing Y N 43 2BA C51 C61 doub Y N 44 2BA C51 C41 sing Y N 45 2BA C61 N61 sing N N 46 2BA C61 N11 sing Y N 47 2BA N11 C21 doub Y N 48 2BA C21 N31 sing Y N 49 2BA N31 C41 doub Y N 50 2BA "C5'" "H5'" sing N N 51 2BA "C5'" "H5'A" sing N N 52 2BA "C4'" "H4'" sing N N 53 2BA "C3'" "H3'" sing N N 54 2BA "C2'" "H2'" sing N N 55 2BA "O2'" "HO2'" sing N N 56 2BA "C1'" "H1'" sing N N 57 2BA C8 H8 sing N N 58 2BA N6 HN6 sing N N 59 2BA N6 HN6A sing N N 60 2BA C2 H2 sing N N 61 2BA "C5'1" "HC5'" sing N N 62 2BA "C5'1" HC5A sing N N 63 2BA "C4'1" "HC4'" sing N N 64 2BA "C3'1" "HC3'" sing N N 65 2BA "C2'1" "HC2'" sing N N 66 2BA "O2'1" HO2A sing N N 67 2BA "C1'1" "HC1'" sing N N 68 2BA C81 HC8 sing N N 69 2BA N61 H1N6 sing N N 70 2BA N61 H1NA sing N N 71 2BA C21 HC2 sing N N 72 2BA O2P H2P sing N N 73 2BA O2P1 H2OP sing N N 74 ALA N CA sing N N 75 ALA N H sing N N 76 ALA N H2 sing N N 77 ALA CA C sing N N 78 ALA CA CB sing N N 79 ALA CA HA sing N N 80 ALA C O doub N N 81 ALA C OXT sing N N 82 ALA CB HB1 sing N N 83 ALA CB HB2 sing N N 84 ALA CB HB3 sing N N 85 ALA OXT HXT sing N N 86 ARG N CA sing N N 87 ARG N H sing N N 88 ARG N H2 sing N N 89 ARG CA C sing N N 90 ARG CA CB sing N N 91 ARG CA HA sing N N 92 ARG C O doub N N 93 ARG C OXT sing N N 94 ARG CB CG sing N N 95 ARG CB HB2 sing N N 96 ARG CB HB3 sing N N 97 ARG CG CD sing N N 98 ARG CG HG2 sing N N 99 ARG CG HG3 sing N N 100 ARG CD NE sing N N 101 ARG CD HD2 sing N N 102 ARG CD HD3 sing N N 103 ARG NE CZ sing N N 104 ARG NE HE sing N N 105 ARG CZ NH1 sing N N 106 ARG CZ NH2 doub N N 107 ARG NH1 HH11 sing N N 108 ARG NH1 HH12 sing N N 109 ARG NH2 HH21 sing N N 110 ARG NH2 HH22 sing N N 111 ARG OXT HXT sing N N 112 ASN N CA sing N N 113 ASN N H sing N N 114 ASN N H2 sing N N 115 ASN CA C sing N N 116 ASN CA CB sing N N 117 ASN CA HA sing N N 118 ASN C O doub N N 119 ASN C OXT sing N N 120 ASN CB CG sing N N 121 ASN CB HB2 sing N N 122 ASN CB HB3 sing N N 123 ASN CG OD1 doub N N 124 ASN CG ND2 sing N N 125 ASN ND2 HD21 sing N N 126 ASN ND2 HD22 sing N N 127 ASN OXT HXT sing N N 128 ASP N CA sing N N 129 ASP N H sing N N 130 ASP N H2 sing N N 131 ASP CA C sing N N 132 ASP CA CB sing N N 133 ASP CA HA sing N N 134 ASP C O doub N N 135 ASP C OXT sing N N 136 ASP CB CG sing N N 137 ASP CB HB2 sing N N 138 ASP CB HB3 sing N N 139 ASP CG OD1 doub N N 140 ASP CG OD2 sing N N 141 ASP OD2 HD2 sing N N 142 ASP OXT HXT sing N N 143 GLN N CA sing N N 144 GLN N H sing N N 145 GLN N H2 sing N N 146 GLN CA C sing N N 147 GLN CA CB sing N N 148 GLN CA HA sing N N 149 GLN C O doub N N 150 GLN C OXT sing N N 151 GLN CB CG sing N N 152 GLN CB HB2 sing N N 153 GLN CB HB3 sing N N 154 GLN CG CD sing N N 155 GLN CG HG2 sing N N 156 GLN CG HG3 sing N N 157 GLN CD OE1 doub N N 158 GLN CD NE2 sing N N 159 GLN NE2 HE21 sing N N 160 GLN NE2 HE22 sing N N 161 GLN OXT HXT sing N N 162 GLU N CA sing N N 163 GLU N H sing N N 164 GLU N H2 sing N N 165 GLU CA C sing N N 166 GLU CA CB sing N N 167 GLU CA HA sing N N 168 GLU C O doub N N 169 GLU C OXT sing N N 170 GLU CB CG sing N N 171 GLU CB HB2 sing N N 172 GLU CB HB3 sing N N 173 GLU CG CD sing N N 174 GLU CG HG2 sing N N 175 GLU CG HG3 sing N N 176 GLU CD OE1 doub N N 177 GLU CD OE2 sing N N 178 GLU OE2 HE2 sing N N 179 GLU OXT HXT sing N N 180 GLY N CA sing N N 181 GLY N H sing N N 182 GLY N H2 sing N N 183 GLY CA C sing N N 184 GLY CA HA2 sing N N 185 GLY CA HA3 sing N N 186 GLY C O doub N N 187 GLY C OXT sing N N 188 GLY OXT HXT sing N N 189 HIS N CA sing N N 190 HIS N H sing N N 191 HIS N H2 sing N N 192 HIS CA C sing N N 193 HIS CA CB sing N N 194 HIS CA HA sing N N 195 HIS C O doub N N 196 HIS C OXT sing N N 197 HIS CB CG sing N N 198 HIS CB HB2 sing N N 199 HIS CB HB3 sing N N 200 HIS CG ND1 sing Y N 201 HIS CG CD2 doub Y N 202 HIS ND1 CE1 doub Y N 203 HIS ND1 HD1 sing N N 204 HIS CD2 NE2 sing Y N 205 HIS CD2 HD2 sing N N 206 HIS CE1 NE2 sing Y N 207 HIS CE1 HE1 sing N N 208 HIS NE2 HE2 sing N N 209 HIS OXT HXT sing N N 210 HOH O H1 sing N N 211 HOH O H2 sing N N 212 ILE N CA sing N N 213 ILE N H sing N N 214 ILE N H2 sing N N 215 ILE CA C sing N N 216 ILE CA CB sing N N 217 ILE CA HA sing N N 218 ILE C O doub N N 219 ILE C OXT sing N N 220 ILE CB CG1 sing N N 221 ILE CB CG2 sing N N 222 ILE CB HB sing N N 223 ILE CG1 CD1 sing N N 224 ILE CG1 HG12 sing N N 225 ILE CG1 HG13 sing N N 226 ILE CG2 HG21 sing N N 227 ILE CG2 HG22 sing N N 228 ILE CG2 HG23 sing N N 229 ILE CD1 HD11 sing N N 230 ILE CD1 HD12 sing N N 231 ILE CD1 HD13 sing N N 232 ILE OXT HXT sing N N 233 LEU N CA sing N N 234 LEU N H sing N N 235 LEU N H2 sing N N 236 LEU CA C sing N N 237 LEU CA CB sing N N 238 LEU CA HA sing N N 239 LEU C O doub N N 240 LEU C OXT sing N N 241 LEU CB CG sing N N 242 LEU CB HB2 sing N N 243 LEU CB HB3 sing N N 244 LEU CG CD1 sing N N 245 LEU CG CD2 sing N N 246 LEU CG HG sing N N 247 LEU CD1 HD11 sing N N 248 LEU CD1 HD12 sing N N 249 LEU CD1 HD13 sing N N 250 LEU CD2 HD21 sing N N 251 LEU CD2 HD22 sing N N 252 LEU CD2 HD23 sing N N 253 LEU OXT HXT sing N N 254 LYS N CA sing N N 255 LYS N H sing N N 256 LYS N H2 sing N N 257 LYS CA C sing N N 258 LYS CA CB sing N N 259 LYS CA HA sing N N 260 LYS C O doub N N 261 LYS C OXT sing N N 262 LYS CB CG sing N N 263 LYS CB HB2 sing N N 264 LYS CB HB3 sing N N 265 LYS CG CD sing N N 266 LYS CG HG2 sing N N 267 LYS CG HG3 sing N N 268 LYS CD CE sing N N 269 LYS CD HD2 sing N N 270 LYS CD HD3 sing N N 271 LYS CE NZ sing N N 272 LYS CE HE2 sing N N 273 LYS CE HE3 sing N N 274 LYS NZ HZ1 sing N N 275 LYS NZ HZ2 sing N N 276 LYS NZ HZ3 sing N N 277 LYS OXT HXT sing N N 278 MET N CA sing N N 279 MET N H sing N N 280 MET N H2 sing N N 281 MET CA C sing N N 282 MET CA CB sing N N 283 MET CA HA sing N N 284 MET C O doub N N 285 MET C OXT sing N N 286 MET CB CG sing N N 287 MET CB HB2 sing N N 288 MET CB HB3 sing N N 289 MET CG SD sing N N 290 MET CG HG2 sing N N 291 MET CG HG3 sing N N 292 MET SD CE sing N N 293 MET CE HE1 sing N N 294 MET CE HE2 sing N N 295 MET CE HE3 sing N N 296 MET OXT HXT sing N N 297 PHE N CA sing N N 298 PHE N H sing N N 299 PHE N H2 sing N N 300 PHE CA C sing N N 301 PHE CA CB sing N N 302 PHE CA HA sing N N 303 PHE C O doub N N 304 PHE C OXT sing N N 305 PHE CB CG sing N N 306 PHE CB HB2 sing N N 307 PHE CB HB3 sing N N 308 PHE CG CD1 doub Y N 309 PHE CG CD2 sing Y N 310 PHE CD1 CE1 sing Y N 311 PHE CD1 HD1 sing N N 312 PHE CD2 CE2 doub Y N 313 PHE CD2 HD2 sing N N 314 PHE CE1 CZ doub Y N 315 PHE CE1 HE1 sing N N 316 PHE CE2 CZ sing Y N 317 PHE CE2 HE2 sing N N 318 PHE CZ HZ sing N N 319 PHE OXT HXT sing N N 320 PRO N CA sing N N 321 PRO N CD sing N N 322 PRO N H sing N N 323 PRO CA C sing N N 324 PRO CA CB sing N N 325 PRO CA HA sing N N 326 PRO C O doub N N 327 PRO C OXT sing N N 328 PRO CB CG sing N N 329 PRO CB HB2 sing N N 330 PRO CB HB3 sing N N 331 PRO CG CD sing N N 332 PRO CG HG2 sing N N 333 PRO CG HG3 sing N N 334 PRO CD HD2 sing N N 335 PRO CD HD3 sing N N 336 PRO OXT HXT sing N N 337 SER N CA sing N N 338 SER N H sing N N 339 SER N H2 sing N N 340 SER CA C sing N N 341 SER CA CB sing N N 342 SER CA HA sing N N 343 SER C O doub N N 344 SER C OXT sing N N 345 SER CB OG sing N N 346 SER CB HB2 sing N N 347 SER CB HB3 sing N N 348 SER OG HG sing N N 349 SER OXT HXT sing N N 350 THR N CA sing N N 351 THR N H sing N N 352 THR N H2 sing N N 353 THR CA C sing N N 354 THR CA CB sing N N 355 THR CA HA sing N N 356 THR C O doub N N 357 THR C OXT sing N N 358 THR CB OG1 sing N N 359 THR CB CG2 sing N N 360 THR CB HB sing N N 361 THR OG1 HG1 sing N N 362 THR CG2 HG21 sing N N 363 THR CG2 HG22 sing N N 364 THR CG2 HG23 sing N N 365 THR OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 2BA 3 'NICKEL (II) ION' NI 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3M05 _pdbx_initial_refinement_model.details 'PDB ENTRY 3M05' #