HEADER HYDROLASE/HYDROLASE INHIBITOR 21-OCT-14 4RMH TITLE HUMAN SIRT2 IN COMPLEX WITH SIRREAL2 AND AC-LYS-H3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 56-356; COMPND 5 SYNONYM: REGULATORY PROTEIN SIR2 HOMOLOG 2, SIR2-LIKE PROTEIN 2; COMPND 6 EC: 3.5.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: AC-LYS-H3 PEPTIDE; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SIRT2, SIR2L, SIR2L2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES KEYWDS HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.RUMPF,M.SCHIEDEL,B.KARAMAN,C.ROESSLER,B.J.NORTH,A.LEHOTZKY,J.OLAH, AUTHOR 2 K.I.LADWEIN,K.SCHMIDTKUNZ,M.GAJER,M.PANNEK,C.STEEGBORN,D.A.SINCLAIR, AUTHOR 3 S.GERHARDT,J.OVADI,M.SCHUTKOWSKI,W.SIPPL,O.EINSLE,M.JUNG REVDAT 2 28-FEB-24 4RMH 1 REMARK SEQADV LINK REVDAT 1 25-FEB-15 4RMH 0 JRNL AUTH T.RUMPF,M.SCHIEDEL,B.KARAMAN,C.ROESSLER,B.J.NORTH, JRNL AUTH 2 A.LEHOTZKY,J.OLAH,K.I.LADWEIN,K.SCHMIDTKUNZ,M.GAJER, JRNL AUTH 3 M.PANNEK,C.STEEGBORN,D.A.SINCLAIR,S.GERHARDT,J.OVADI, JRNL AUTH 4 M.SCHUTKOWSKI,W.SIPPL,O.EINSLE,M.JUNG JRNL TITL SELECTIVE SIRT2 INHIBITION BY LIGAND-INDUCED REARRANGEMENT JRNL TITL 2 OF THE ACTIVE SITE. JRNL REF NAT COMMUN V. 6 6263 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 25672491 JRNL DOI 10.1038/NCOMMS7263 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 51021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2658 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3760 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.3140 REMARK 3 BIN FREE R VALUE SET COUNT : 213 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2333 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 243 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : 0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.45000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.546 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2522 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2402 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3422 ; 1.331 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5563 ; 0.798 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ; 5.603 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;33.191 ;23.565 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 450 ;13.498 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;18.455 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 366 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2954 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 580 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1200 ; 1.033 ; 1.811 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1201 ; 1.033 ; 1.812 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1499 ; 1.708 ; 2.696 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1500 ; 1.708 ; 2.697 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1322 ; 1.319 ; 2.060 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1323 ; 1.319 ; 2.061 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1909 ; 2.147 ; 3.034 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3012 ; 4.173 ;15.556 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2892 ; 4.024 ;15.150 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 56 A 356 REMARK 3 RESIDUE RANGE : A 401 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): 7.1921 17.3393 19.0370 REMARK 3 T TENSOR REMARK 3 T11: 0.0037 T22: 0.0110 REMARK 3 T33: 0.0206 T12: 0.0047 REMARK 3 T13: 0.0064 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.0781 L22: 0.1546 REMARK 3 L33: 0.1473 L12: -0.0227 REMARK 3 L13: -0.0759 L23: -0.0728 REMARK 3 S TENSOR REMARK 3 S11: 0.0005 S12: 0.0201 S13: -0.0169 REMARK 3 S21: 0.0057 S22: 0.0057 S23: 0.0175 REMARK 3 S31: -0.0097 S32: -0.0312 S33: -0.0062 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4RMH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087528. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : FIXED-EXIT LN2 COOLED DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53705 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 55.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.8 M AMMONIUM SULFATE, PH 9.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.65100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 53 REMARK 465 HIS A 54 REMARK 465 MET A 55 REMARK 465 LEU A 107 REMARK 465 GLU A 108 REMARK 465 MET A 299 REMARK 465 ILE A 300 REMARK 465 MET A 301 REMARK 465 GLY A 302 REMARK 465 LEU A 303 REMARK 465 GLY A 304 REMARK 465 GLY A 305 REMARK 465 THR B 11 REMARK 465 GLY B 12 REMARK 465 GLY B 13 REMARK 465 ALA B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 56 CG CD OE1 OE2 REMARK 470 LYS A 109 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 200 -68.69 -120.89 REMARK 500 ASP A 231 34.41 -76.03 REMARK 500 LEU A 297 -70.49 -118.91 REMARK 500 TYR A 315 -11.35 -142.89 REMARK 500 ARG A 316 -7.52 -150.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 195 SG REMARK 620 2 CYS A 200 SG 111.5 REMARK 620 3 CYS A 221 SG 110.8 108.3 REMARK 620 4 CYS A 224 SG 96.2 117.1 112.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3TE A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RMG RELATED DB: PDB REMARK 900 RELATED ID: 4RMI RELATED DB: PDB REMARK 900 RELATED ID: 4RMJ RELATED DB: PDB DBREF 4RMH A 56 356 UNP Q8IXJ6 SIR2_HUMAN 56 356 DBREF 4RMH B 11 17 PDB 4RMH 4RMH 11 17 SEQADV 4RMH GLY A 53 UNP Q8IXJ6 EXPRESSION TAG SEQADV 4RMH HIS A 54 UNP Q8IXJ6 EXPRESSION TAG SEQADV 4RMH MET A 55 UNP Q8IXJ6 EXPRESSION TAG SEQRES 1 A 304 GLY HIS MET GLU ARG LEU LEU ASP GLU LEU THR LEU GLU SEQRES 2 A 304 GLY VAL ALA ARG TYR MET GLN SER GLU ARG CYS ARG ARG SEQRES 3 A 304 VAL ILE CYS LEU VAL GLY ALA GLY ILE SER THR SER ALA SEQRES 4 A 304 GLY ILE PRO ASP PHE ARG SER PRO SER THR GLY LEU TYR SEQRES 5 A 304 ASP ASN LEU GLU LYS TYR HIS LEU PRO TYR PRO GLU ALA SEQRES 6 A 304 ILE PHE GLU ILE SER TYR PHE LYS LYS HIS PRO GLU PRO SEQRES 7 A 304 PHE PHE ALA LEU ALA LYS GLU LEU TYR PRO GLY GLN PHE SEQRES 8 A 304 LYS PRO THR ILE CYS HIS TYR PHE MET ARG LEU LEU LYS SEQRES 9 A 304 ASP LYS GLY LEU LEU LEU ARG CYS TYR THR GLN ASN ILE SEQRES 10 A 304 ASP THR LEU GLU ARG ILE ALA GLY LEU GLU GLN GLU ASP SEQRES 11 A 304 LEU VAL GLU ALA HIS GLY THR PHE TYR THR SER HIS CYS SEQRES 12 A 304 VAL SER ALA SER CYS ARG HIS GLU TYR PRO LEU SER TRP SEQRES 13 A 304 MET LYS GLU LYS ILE PHE SER GLU VAL THR PRO LYS CYS SEQRES 14 A 304 GLU ASP CYS GLN SER LEU VAL LYS PRO ASP ILE VAL PHE SEQRES 15 A 304 PHE GLY GLU SER LEU PRO ALA ARG PHE PHE SER CYS MET SEQRES 16 A 304 GLN SER ASP PHE LEU LYS VAL ASP LEU LEU LEU VAL MET SEQRES 17 A 304 GLY THR SER LEU GLN VAL GLN PRO PHE ALA SER LEU ILE SEQRES 18 A 304 SER LYS ALA PRO LEU SER THR PRO ARG LEU LEU ILE ASN SEQRES 19 A 304 LYS GLU LYS ALA GLY GLN SER ASP PRO PHE LEU GLY MET SEQRES 20 A 304 ILE MET GLY LEU GLY GLY GLY MET ASP PHE ASP SER LYS SEQRES 21 A 304 LYS ALA TYR ARG ASP VAL ALA TRP LEU GLY GLU CYS ASP SEQRES 22 A 304 GLN GLY CYS LEU ALA LEU ALA GLU LEU LEU GLY TRP LYS SEQRES 23 A 304 LYS GLU LEU GLU ASP LEU VAL ARG ARG GLU HIS ALA SER SEQRES 24 A 304 ILE ASP ALA GLN SER SEQRES 1 B 7 THR GLY GLY ALY ALA PRO ARG MODRES 4RMH ALY B 14 LYS N(6)-ACETYLLYSINE HET ALY B 14 12 HET ZN A 401 1 HET 3TE A 402 29 HETNAM ALY N(6)-ACETYLLYSINE HETNAM ZN ZINC ION HETNAM 3TE 2-[(4,6-DIMETHYLPYRIMIDIN-2-YL)SULFANYL]-N-[5- HETNAM 2 3TE (NAPHTHALEN-1-YLMETHYL)-1,3-THIAZOL-2-YL]ACETAMIDE FORMUL 2 ALY C8 H16 N2 O3 FORMUL 3 ZN ZN 2+ FORMUL 4 3TE C22 H20 N4 O S2 FORMUL 5 HOH *243(H2 O) HELIX 1 1 THR A 63 GLN A 72 1 10 HELIX 2 2 ALA A 85 GLY A 92 5 8 HELIX 3 3 SER A 98 GLY A 102 5 5 HELIX 4 4 TYR A 114 PHE A 119 5 6 HELIX 5 5 GLU A 120 HIS A 127 1 8 HELIX 6 6 PRO A 128 TYR A 139 1 12 HELIX 7 7 THR A 146 LYS A 158 1 13 HELIX 8 8 THR A 171 ALA A 176 1 6 HELIX 9 9 GLU A 179 GLU A 181 5 3 HELIX 10 10 LEU A 206 GLU A 216 1 11 HELIX 11 11 PRO A 240 PHE A 251 1 12 HELIX 12 12 PRO A 268 ALA A 276 5 9 HELIX 13 13 GLU A 323 LEU A 335 1 13 HELIX 14 14 TRP A 337 ALA A 354 1 18 SHEET 1 A 6 LEU A 183 GLU A 185 0 SHEET 2 A 6 LEU A 161 THR A 166 1 N THR A 166 O VAL A 184 SHEET 3 A 6 VAL A 79 VAL A 83 1 N CYS A 81 O TYR A 165 SHEET 4 A 6 LEU A 256 MET A 260 1 O MET A 260 N LEU A 82 SHEET 5 A 6 ARG A 282 ASN A 286 1 O LEU A 283 N VAL A 259 SHEET 6 A 6 ASP A 317 LEU A 321 1 O VAL A 318 N LEU A 284 SHEET 1 B 3 GLU A 203 PRO A 205 0 SHEET 2 B 3 GLY A 188 CYS A 195 -1 N SER A 193 O TYR A 204 SHEET 3 B 3 VAL A 228 ILE A 232 -1 O ASP A 231 N THR A 192 LINK SG CYS A 195 ZN ZN A 401 1555 1555 2.30 LINK SG CYS A 200 ZN ZN A 401 1555 1555 2.32 LINK SG CYS A 221 ZN ZN A 401 1555 1555 2.32 LINK SG CYS A 224 ZN ZN A 401 1555 1555 2.32 CISPEP 1 GLN A 267 PRO A 268 0 0.36 SITE 1 AC1 4 CYS A 195 CYS A 200 CYS A 221 CYS A 224 SITE 1 AC2 13 PHE A 96 TYR A 104 ILE A 118 PHE A 119 SITE 2 AC2 13 PHE A 131 ALA A 135 TYR A 139 PRO A 140 SITE 3 AC2 13 PHE A 143 PHE A 190 ILE A 232 VAL A 233 SITE 4 AC2 13 PHE A 234 CRYST1 35.994 73.302 55.291 90.00 95.23 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027782 0.000000 0.002541 0.00000 SCALE2 0.000000 0.013642 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018162 0.00000