HEADER IMMUNE SYSTEM 22-OCT-14 4RMV TITLE CRYSTAL STRUCTURE OF THE D76H BETA-2 MICROGLOBULIN MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 21-119; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: B2M, CDABP0092, HDCMA22P, NM_004048; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNOGLOBIN, BETA-SANDWITCH, AMYLOIDOSIS, PATHOLOGIC MUTATION, KEYWDS 2 GENETIC DISEASE, MHC CLASS I, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR M.DE ROSA,M.BOLOGNESI,S.RICAGNO REVDAT 4 30-OCT-24 4RMV 1 REMARK REVDAT 3 20-SEP-23 4RMV 1 REMARK SEQADV REVDAT 2 27-JUN-18 4RMV 1 JRNL REVDAT 1 18-NOV-15 4RMV 0 JRNL AUTH T.LE MARCHAND,M.DE ROSA,N.SALVI,B.M.SALA,L.B.ANDREAS, JRNL AUTH 2 E.BARBET-MASSIN,P.SORMANNI,A.BARBIROLI,R.PORCARI, JRNL AUTH 3 C.SOUSA MOTA,D.DE SANCTIS,M.BOLOGNESI,L.EMSLEY,V.BELLOTTI, JRNL AUTH 4 M.BLACKLEDGE,C.CAMILLONI,G.PINTACUDA,S.RICAGNO JRNL TITL CONFORMATIONAL DYNAMICS IN CRYSTALS REVEAL THE MOLECULAR JRNL TITL 2 BASES FOR D76N BETA-2 MICROGLOBULIN AGGREGATION PROPENSITY. JRNL REF NAT COMMUN V. 9 1658 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29695721 JRNL DOI 10.1038/S41467-018-04078-Y REMARK 2 REMARK 2 RESOLUTION. 1.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 16323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1633 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.6147 - 3.3456 0.97 1281 143 0.1592 0.2058 REMARK 3 2 3.3456 - 2.6571 0.98 1260 139 0.1781 0.2120 REMARK 3 3 2.6571 - 2.3216 0.95 1192 133 0.1789 0.2279 REMARK 3 4 2.3216 - 2.1096 0.99 1255 139 0.1780 0.2230 REMARK 3 5 2.1096 - 1.9585 0.98 1242 139 0.1743 0.2095 REMARK 3 6 1.9585 - 1.8431 0.94 1178 131 0.1927 0.2414 REMARK 3 7 1.8431 - 1.7508 0.98 1228 136 0.2039 0.2413 REMARK 3 8 1.7508 - 1.6746 0.99 1240 138 0.2033 0.2753 REMARK 3 9 1.6746 - 1.6102 0.94 1162 130 0.2367 0.2772 REMARK 3 10 1.6102 - 1.5546 0.97 1219 136 0.2388 0.2785 REMARK 3 11 1.5546 - 1.5060 0.97 1213 132 0.2717 0.2788 REMARK 3 12 1.5060 - 1.4630 0.98 1220 137 0.3121 0.3751 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 973 REMARK 3 ANGLE : 1.166 1327 REMARK 3 CHIRALITY : 0.081 136 REMARK 3 PLANARITY : 0.005 172 REMARK 3 DIHEDRAL : 14.905 384 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.2039 -19.5268 19.7942 REMARK 3 T TENSOR REMARK 3 T11: 0.1096 T22: 0.0838 REMARK 3 T33: 0.1268 T12: -0.0039 REMARK 3 T13: 0.0207 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 3.5527 L22: 2.9130 REMARK 3 L33: 6.4702 L12: -3.5060 REMARK 3 L13: 4.8142 L23: -3.3884 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: 0.0260 S13: -0.1532 REMARK 3 S21: 0.0457 S22: 0.1507 S23: 0.1523 REMARK 3 S31: -0.0021 S32: -0.0025 S33: -0.2606 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.0398 -4.5470 10.3140 REMARK 3 T TENSOR REMARK 3 T11: 0.2614 T22: 0.3500 REMARK 3 T33: 0.3587 T12: 0.1162 REMARK 3 T13: 0.1153 T23: 0.1434 REMARK 3 L TENSOR REMARK 3 L11: 5.1474 L22: 7.0565 REMARK 3 L33: 1.9413 L12: -2.3450 REMARK 3 L13: 2.7034 L23: -3.0048 REMARK 3 S TENSOR REMARK 3 S11: 0.3986 S12: 0.9566 S13: 0.6481 REMARK 3 S21: 0.4029 S22: 0.2828 S23: 1.0010 REMARK 3 S31: -0.6910 S32: -1.0447 S33: -0.3979 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.4848 -13.5015 16.1320 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.1342 REMARK 3 T33: 0.1372 T12: 0.0146 REMARK 3 T13: 0.0056 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 5.6802 L22: 4.0712 REMARK 3 L33: 4.4820 L12: -5.2112 REMARK 3 L13: 5.5547 L23: -4.8689 REMARK 3 S TENSOR REMARK 3 S11: 0.0342 S12: -0.1386 S13: -0.2618 REMARK 3 S21: -0.0138 S22: 0.1260 S23: 0.1897 REMARK 3 S31: 0.0828 S32: -0.2805 S33: -0.2224 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.3296 -9.4393 9.5323 REMARK 3 T TENSOR REMARK 3 T11: 0.2099 T22: 0.1786 REMARK 3 T33: 0.1861 T12: -0.0015 REMARK 3 T13: 0.0019 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 4.0865 L22: 2.3191 REMARK 3 L33: 4.3806 L12: -0.5180 REMARK 3 L13: 2.2961 L23: 0.8512 REMARK 3 S TENSOR REMARK 3 S11: -0.2961 S12: 0.5220 S13: 0.3944 REMARK 3 S21: -0.2398 S22: -0.0110 S23: -0.0764 REMARK 3 S31: -0.9934 S32: 0.1159 S33: 0.2402 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.1179 -7.0584 22.3563 REMARK 3 T TENSOR REMARK 3 T11: 0.2822 T22: 0.1244 REMARK 3 T33: 0.2626 T12: 0.0028 REMARK 3 T13: -0.0016 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 7.4910 L22: 7.3141 REMARK 3 L33: 4.3344 L12: -2.0560 REMARK 3 L13: 2.3825 L23: -4.8862 REMARK 3 S TENSOR REMARK 3 S11: -0.0826 S12: -0.2305 S13: 0.7556 REMARK 3 S21: -0.4235 S22: 0.1894 S23: 0.5060 REMARK 3 S31: -0.8882 S32: -0.1837 S33: 0.0246 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 75.3728 -17.3198 32.1335 REMARK 3 T TENSOR REMARK 3 T11: 0.6500 T22: 0.4814 REMARK 3 T33: 0.3720 T12: 0.0295 REMARK 3 T13: -0.0900 T23: 0.1667 REMARK 3 L TENSOR REMARK 3 L11: 4.1239 L22: 4.4993 REMARK 3 L33: 5.7694 L12: -3.6733 REMARK 3 L13: 2.1829 L23: -4.3294 REMARK 3 S TENSOR REMARK 3 S11: -0.0849 S12: -1.6300 S13: -1.1352 REMARK 3 S21: 1.7300 S22: -0.4407 S23: -1.0220 REMARK 3 S31: 1.7734 S32: 0.9955 S33: 0.3902 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.5295 -8.6039 16.4108 REMARK 3 T TENSOR REMARK 3 T11: 0.1209 T22: 0.0874 REMARK 3 T33: 0.1393 T12: -0.0160 REMARK 3 T13: 0.0064 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 7.9092 L22: 6.8808 REMARK 3 L33: 1.9247 L12: -4.7326 REMARK 3 L13: 1.9645 L23: 0.3550 REMARK 3 S TENSOR REMARK 3 S11: 0.2003 S12: 0.2766 S13: 0.1765 REMARK 3 S21: -0.2946 S22: -0.3094 S23: 0.2481 REMARK 3 S31: -0.2766 S32: 0.1077 S33: -0.1536 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.1330 -12.0864 -1.2942 REMARK 3 T TENSOR REMARK 3 T11: 0.3452 T22: 0.2956 REMARK 3 T33: 0.2033 T12: 0.0446 REMARK 3 T13: -0.0778 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 6.4041 L22: 4.4717 REMARK 3 L33: 3.4607 L12: 1.4598 REMARK 3 L13: 0.7043 L23: 3.9813 REMARK 3 S TENSOR REMARK 3 S11: -0.1143 S12: 0.7703 S13: -0.1500 REMARK 3 S21: -0.8292 S22: -0.1758 S23: 0.4658 REMARK 3 S31: -0.5627 S32: -0.1342 S33: 0.3631 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 78 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.3176 -17.8911 10.8484 REMARK 3 T TENSOR REMARK 3 T11: 0.1290 T22: 0.1490 REMARK 3 T33: 0.1102 T12: 0.0281 REMARK 3 T13: 0.0311 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 3.1750 L22: 2.0992 REMARK 3 L33: 3.9474 L12: -2.0249 REMARK 3 L13: 2.7985 L23: -1.0011 REMARK 3 S TENSOR REMARK 3 S11: 0.1525 S12: 0.5152 S13: 0.2160 REMARK 3 S21: -0.3118 S22: -0.2225 S23: -0.2042 REMARK 3 S31: 0.2543 S32: 0.2022 S33: 0.1505 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.1948 -19.6234 6.9172 REMARK 3 T TENSOR REMARK 3 T11: 0.1874 T22: 0.1688 REMARK 3 T33: 0.4280 T12: -0.0024 REMARK 3 T13: -0.0579 T23: -0.0691 REMARK 3 L TENSOR REMARK 3 L11: 4.9593 L22: 2.0465 REMARK 3 L33: 8.4599 L12: -1.6450 REMARK 3 L13: 4.9803 L23: 0.2715 REMARK 3 S TENSOR REMARK 3 S11: 0.0091 S12: -0.1331 S13: -1.2680 REMARK 3 S21: -0.0570 S22: -0.0946 S23: 0.9248 REMARK 3 S31: 0.3099 S32: -0.5119 S33: 0.0159 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RMV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087542. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : BENT CYLINDRICAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16365 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.460 REMARK 200 RESOLUTION RANGE LOW (A) : 21.612 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YXF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG4000, 15% GLYCEROL, 0.2 M REMARK 280 AMMONIUM ACETATE, 0.1 M MES, PH 6.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.77000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 14.43550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.77000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 14.43550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 57 -95.29 -100.81 REMARK 500 ARG A 97 3.25 -69.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YXF RELATED DB: PDB REMARK 900 RELATED ID: 4FXL RELATED DB: PDB REMARK 900 RELATED ID: 4RMQ RELATED DB: PDB REMARK 900 RELATED ID: 4RMR RELATED DB: PDB REMARK 900 RELATED ID: 4RMS RELATED DB: PDB REMARK 900 RELATED ID: 4RMT RELATED DB: PDB REMARK 900 RELATED ID: 4RMU RELATED DB: PDB REMARK 900 RELATED ID: 4RMW RELATED DB: PDB DBREF 4RMV A 1 99 UNP P61769 B2MG_HUMAN 21 119 SEQADV 4RMV MET A 0 UNP P61769 INITIATING METHIONINE SEQADV 4RMV HIS A 76 UNP P61769 ASP 96 ENGINEERED MUTATION SEQRES 1 A 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 A 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 A 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 A 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 A 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 A 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS HIS GLU SEQRES 7 A 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 A 100 LYS ILE VAL LYS TRP ASP ARG ASP MET HET ACT A 101 4 HET PGE A 102 10 HETNAM ACT ACETATE ION HETNAM PGE TRIETHYLENE GLYCOL FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 PGE C6 H14 O4 FORMUL 4 HOH *76(H2 O) SHEET 1 A 4 LYS A 6 ARG A 12 0 SHEET 2 A 4 PHE A 22 PHE A 30 -1 O ASN A 24 N TYR A 10 SHEET 3 A 4 PHE A 62 GLU A 69 -1 O THR A 68 N LEU A 23 SHEET 4 A 4 HIS A 51 PHE A 56 -1 N ASP A 53 O LEU A 65 SHEET 1 B 4 GLU A 44 ARG A 45 0 SHEET 2 B 4 GLU A 36 LYS A 41 -1 N LYS A 41 O GLU A 44 SHEET 3 B 4 TYR A 78 ASN A 83 -1 O ALA A 79 N LEU A 40 SHEET 4 B 4 LYS A 91 LYS A 94 -1 O LYS A 91 N VAL A 82 SSBOND 1 CYS A 25 CYS A 80 1555 1555 2.03 CISPEP 1 HIS A 31 PRO A 32 0 -2.86 SITE 1 AC1 4 ARG A 3 HIS A 84 HOH A 224 HOH A 262 SITE 1 AC2 4 TYR A 10 ARG A 12 TYR A 26 LEU A 65 CRYST1 77.540 28.871 53.280 90.00 125.78 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012897 0.000000 0.009294 0.00000 SCALE2 0.000000 0.034637 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023135 0.00000