HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 27-OCT-14 4RO3 TITLE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF PROTEIN TITLE 2 WITH UNKNOWN FUNCTION FROM VIBRIO CHOLERAE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN OF HYPOTHETICAL PROTEIN FROM VIBRIO COMPND 5 CHOLERAE AGG09405; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR; SOURCE 3 ORGANISM_TAXID: 686; SOURCE 4 STRAIN: O1 BIOVAR EL TOR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, HTH MOTIF, N-TERMINAL DOMAIN, HYPOTHETICAL PROTEIN, KEYWDS 4 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,Z.WAWRZAK,P.J.STOGIOS,T.SKARINA,K.D.SEED,V.YIM,A.SAVCHENKO, AUTHOR 2 W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 22-NOV-17 4RO3 1 REMARK REVDAT 2 22-APR-15 4RO3 1 AUTHOR JRNL REVDAT 1 03-DEC-14 4RO3 0 JRNL AUTH G.MINASOV,Z.WAWRZAK,P.J.STOGIOS,T.SKARINA,K.D.SEED,V.YIM, JRNL AUTH 2 A.SAVCHENKO,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF JRNL TITL 2 PROTEIN WITH UNKNOWN FUNCTION FROM VIBRIO CHOLERAE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19835 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1068 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1448 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1876 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 231 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.28000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.342 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2065 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1967 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2808 ; 1.406 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4526 ; 0.716 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 2.889 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;29.629 ;24.184 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 377 ;11.509 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ; 7.879 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 314 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2331 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 491 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 973 ; 1.905 ; 1.942 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 972 ; 1.894 ; 1.939 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1232 ; 2.970 ; 2.888 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1233 ; 2.970 ; 2.891 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1089 ; 2.827 ; 2.350 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1065 ; 2.523 ; 2.265 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1535 ; 4.013 ; 3.265 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2597 ; 8.929 ;18.010 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2478 ; 8.603 ;16.772 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 41 REMARK 3 ORIGIN FOR THE GROUP (A): 24.3942 38.6475 38.0647 REMARK 3 T TENSOR REMARK 3 T11: 0.0233 T22: 0.0450 REMARK 3 T33: 0.0522 T12: -0.0239 REMARK 3 T13: -0.0129 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 2.2782 L22: 2.1923 REMARK 3 L33: 1.3027 L12: -0.0702 REMARK 3 L13: -0.1058 L23: 0.1264 REMARK 3 S TENSOR REMARK 3 S11: -0.0132 S12: -0.0484 S13: 0.0771 REMARK 3 S21: 0.1158 S22: 0.0319 S23: 0.0763 REMARK 3 S31: -0.0372 S32: 0.1305 S33: -0.0186 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 66 REMARK 3 ORIGIN FOR THE GROUP (A): 33.3729 25.2620 42.4889 REMARK 3 T TENSOR REMARK 3 T11: 0.0286 T22: 0.0448 REMARK 3 T33: 0.0806 T12: 0.0005 REMARK 3 T13: -0.0292 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.9299 L22: 2.4672 REMARK 3 L33: 5.6276 L12: -1.1435 REMARK 3 L13: 2.2402 L23: -1.5932 REMARK 3 S TENSOR REMARK 3 S11: 0.0204 S12: -0.0742 S13: -0.2191 REMARK 3 S21: -0.0119 S22: 0.0626 S23: -0.0020 REMARK 3 S31: 0.0975 S32: -0.0018 S33: -0.0831 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 67 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): 35.6336 33.8983 33.5405 REMARK 3 T TENSOR REMARK 3 T11: 0.0185 T22: 0.0651 REMARK 3 T33: 0.0499 T12: -0.0228 REMARK 3 T13: -0.0027 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 3.7354 L22: 2.0123 REMARK 3 L33: 2.6598 L12: -0.9739 REMARK 3 L13: 0.7325 L23: -1.1816 REMARK 3 S TENSOR REMARK 3 S11: 0.0174 S12: 0.1021 S13: -0.0333 REMARK 3 S21: -0.0239 S22: -0.1290 S23: -0.2035 REMARK 3 S31: 0.0262 S32: 0.2723 S33: 0.1115 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 116 REMARK 3 ORIGIN FOR THE GROUP (A): 25.3273 47.1580 39.4527 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.1219 REMARK 3 T33: 0.2005 T12: -0.0248 REMARK 3 T13: -0.0055 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 3.3915 L22: 3.7423 REMARK 3 L33: 4.7696 L12: -0.8988 REMARK 3 L13: 3.1441 L23: -2.1701 REMARK 3 S TENSOR REMARK 3 S11: -0.2246 S12: -0.2543 S13: 0.4798 REMARK 3 S21: 0.2704 S22: 0.2412 S23: 0.1687 REMARK 3 S31: -0.3949 S32: -0.1476 S33: -0.0166 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 27 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5131 23.7986 35.6513 REMARK 3 T TENSOR REMARK 3 T11: 0.0849 T22: 0.0448 REMARK 3 T33: 0.0402 T12: -0.0320 REMARK 3 T13: 0.0282 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 3.1794 L22: 4.9847 REMARK 3 L33: 3.8366 L12: 2.3467 REMARK 3 L13: 2.3383 L23: 4.3479 REMARK 3 S TENSOR REMARK 3 S11: 0.1860 S12: -0.0819 S13: -0.0062 REMARK 3 S21: 0.2665 S22: -0.2301 S23: 0.0481 REMARK 3 S31: 0.2543 S32: -0.2052 S33: 0.0441 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 65 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3675 36.6942 39.4211 REMARK 3 T TENSOR REMARK 3 T11: 0.0333 T22: 0.0560 REMARK 3 T33: 0.1019 T12: -0.0130 REMARK 3 T13: 0.0338 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 3.0979 L22: 1.2696 REMARK 3 L33: 2.7143 L12: -1.4835 REMARK 3 L13: -0.8694 L23: 1.5898 REMARK 3 S TENSOR REMARK 3 S11: -0.0812 S12: -0.0613 S13: -0.0461 REMARK 3 S21: 0.0035 S22: -0.0387 S23: 0.0601 REMARK 3 S31: -0.0395 S32: -0.1276 S33: 0.1200 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 66 B 94 REMARK 3 ORIGIN FOR THE GROUP (A): 4.3966 33.6388 28.5625 REMARK 3 T TENSOR REMARK 3 T11: 0.2237 T22: 0.2307 REMARK 3 T33: 0.1419 T12: 0.0573 REMARK 3 T13: -0.0012 T23: -0.0767 REMARK 3 L TENSOR REMARK 3 L11: 4.6486 L22: 2.7539 REMARK 3 L33: 2.6077 L12: 0.1256 REMARK 3 L13: -0.3645 L23: -1.0194 REMARK 3 S TENSOR REMARK 3 S11: 0.0238 S12: 0.3297 S13: 0.1688 REMARK 3 S21: -0.4990 S22: -0.2067 S23: 0.2388 REMARK 3 S31: 0.1815 S32: -0.4540 S33: 0.1828 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 95 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8006 22.0091 36.1114 REMARK 3 T TENSOR REMARK 3 T11: 0.1277 T22: 0.0747 REMARK 3 T33: 0.0764 T12: -0.0508 REMARK 3 T13: 0.0592 T23: -0.0363 REMARK 3 L TENSOR REMARK 3 L11: 4.1022 L22: 5.0689 REMARK 3 L33: 1.9234 L12: -3.2087 REMARK 3 L13: -0.9958 L23: 2.5614 REMARK 3 S TENSOR REMARK 3 S11: -0.1030 S12: 0.0042 S13: 0.0021 REMARK 3 S21: 0.3533 S22: 0.0013 S23: -0.0896 REMARK 3 S31: 0.4008 S32: -0.1452 S33: 0.1017 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4RO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000087584. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21028 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 40.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.57700 REMARK 200 R SYM FOR SHELL (I) : 0.57700 REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 7.0 MG/ML, 0.3M SODIUM REMARK 280 CHLORIDE, 0.01M HEPES (PH 7.5), + THERMOLYSIN; SCREEN: 0.2M REMARK 280 LITHIUM SULFATE, BIS-TRIS 0.1M (PH 5.5), 25% (W/V) PEG 3350; REMARK 280 CRYO: 5% GLYCEROL IN SCREEN SOLUTION, THEN PARATON, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 47.53250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.28800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 47.53250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.28800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAINS A AND B FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -107.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 405 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 THR A 117 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ASN B 116 REMARK 465 THR B 117 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 91 -54.42 -133.40 REMARK 500 ASN A 93 53.59 -115.73 REMARK 500 ASN B 91 -90.57 -95.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP92784 RELATED DB: TARGETTRACK DBREF 4RO3 A 1 117 UNP M1RHE3 M1RHE3_VIBCL 1 117 DBREF 4RO3 B 1 117 UNP M1RHE3 M1RHE3_VIBCL 1 117 SEQADV 4RO3 SER A -2 UNP M1RHE3 EXPRESSION TAG SEQADV 4RO3 ASN A -1 UNP M1RHE3 EXPRESSION TAG SEQADV 4RO3 ALA A 0 UNP M1RHE3 EXPRESSION TAG SEQADV 4RO3 SER B -2 UNP M1RHE3 EXPRESSION TAG SEQADV 4RO3 ASN B -1 UNP M1RHE3 EXPRESSION TAG SEQADV 4RO3 ALA B 0 UNP M1RHE3 EXPRESSION TAG SEQRES 1 A 120 SER ASN ALA MSE SER LYS PHE TYR GLN ILE ASN THR THR SEQRES 2 A 120 LEU LEU GLU SER ASN GLU ALA VAL ASN LYS GLN THR GLY SEQRES 3 A 120 GLU VAL VAL PRO LEU SER PRO GLU THR LYS LEU VAL TYR SEQRES 4 A 120 ALA TYR MSE LEU ASN GLN TYR ARG MSE TYR ARG LYS TYR SEQRES 5 A 120 GLY ASN ARG ARG TYR THR GLU SER TRP ASP LYS ILE PHE SEQRES 6 A 120 THR VAL CYS CYS ASP VAL ALA ALA GLN LYS GLN LYS ARG SEQRES 7 A 120 LEU ALA LYS GLU LEU THR THR LEU GLY LEU ILE GLU VAL SEQRES 8 A 120 ILE GLY ASN LYS ASN ALA TYR LYS VAL VAL HIS SER VAL SEQRES 9 A 120 GLU SER ILE ILE GLU THR TRP GLU PHE THR ASN SER LYS SEQRES 10 A 120 LEU ASN THR SEQRES 1 B 120 SER ASN ALA MSE SER LYS PHE TYR GLN ILE ASN THR THR SEQRES 2 B 120 LEU LEU GLU SER ASN GLU ALA VAL ASN LYS GLN THR GLY SEQRES 3 B 120 GLU VAL VAL PRO LEU SER PRO GLU THR LYS LEU VAL TYR SEQRES 4 B 120 ALA TYR MSE LEU ASN GLN TYR ARG MSE TYR ARG LYS TYR SEQRES 5 B 120 GLY ASN ARG ARG TYR THR GLU SER TRP ASP LYS ILE PHE SEQRES 6 B 120 THR VAL CYS CYS ASP VAL ALA ALA GLN LYS GLN LYS ARG SEQRES 7 B 120 LEU ALA LYS GLU LEU THR THR LEU GLY LEU ILE GLU VAL SEQRES 8 B 120 ILE GLY ASN LYS ASN ALA TYR LYS VAL VAL HIS SER VAL SEQRES 9 B 120 GLU SER ILE ILE GLU THR TRP GLU PHE THR ASN SER LYS SEQRES 10 B 120 LEU ASN THR MODRES 4RO3 MSE A 39 MET SELENOMETHIONINE MODRES 4RO3 MSE A 45 MET SELENOMETHIONINE MODRES 4RO3 MSE B 39 MET SELENOMETHIONINE MODRES 4RO3 MSE B 45 MET SELENOMETHIONINE HET MSE A 39 8 HET MSE A 45 8 HET MSE B 39 8 HET MSE B 45 8 HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 B 203 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 SO4 7(O4 S 2-) FORMUL 10 HOH *231(H2 O) HELIX 1 1 THR A 9 SER A 14 1 6 HELIX 2 2 SER A 29 TYR A 49 1 21 HELIX 3 3 SER A 57 CYS A 66 1 10 HELIX 4 4 ALA A 69 LEU A 83 1 15 HELIX 5 5 VAL A 101 ILE A 105 5 5 HELIX 6 6 THR B 9 GLU B 13 1 5 HELIX 7 7 SER B 29 TYR B 49 1 21 HELIX 8 8 SER B 57 CYS B 66 1 10 HELIX 9 9 ALA B 69 LEU B 83 1 15 HELIX 10 10 VAL B 101 ILE B 105 5 5 SHEET 1 A 2 PHE A 4 ASN A 8 0 SHEET 2 A 2 PHE B 4 ASN B 8 -1 O TYR B 5 N ILE A 7 SHEET 1 B 3 VAL A 25 PRO A 27 0 SHEET 2 B 3 GLU A 16 ASN A 19 -1 N ALA A 17 O VAL A 26 SHEET 3 B 3 TRP A 108 THR A 111 -1 O GLU A 109 N VAL A 18 SHEET 1 C 2 ILE A 86 ILE A 89 0 SHEET 2 C 2 TYR A 95 VAL A 98 -1 O TYR A 95 N ILE A 89 SHEET 1 D 3 VAL B 25 PRO B 27 0 SHEET 2 D 3 GLU B 16 ASN B 19 -1 N ALA B 17 O VAL B 26 SHEET 3 D 3 TRP B 108 THR B 111 -1 O GLU B 109 N VAL B 18 SHEET 1 E 2 ILE B 86 ILE B 89 0 SHEET 2 E 2 TYR B 95 VAL B 98 -1 O TYR B 95 N ILE B 89 LINK C TYR A 38 N MSE A 39 1555 1555 1.34 LINK C MSE A 39 N LEU A 40 1555 1555 1.32 LINK C ARG A 44 N MSE A 45 1555 1555 1.34 LINK C MSE A 45 N TYR A 46 1555 1555 1.34 LINK C TYR B 38 N MSE B 39 1555 1555 1.32 LINK C MSE B 39 N LEU B 40 1555 1555 1.34 LINK C AARG B 44 N MSE B 45 1555 1555 1.33 LINK C BARG B 44 N MSE B 45 1555 1555 1.33 LINK C MSE B 45 N TYR B 46 1555 1555 1.33 SITE 1 AC1 5 SER A 57 TRP A 58 LYS A 96 HOH A 306 SITE 2 AC1 5 HOH A 382 SITE 1 AC2 7 TYR A 43 ARG A 53 TYR A 95 VAL A 97 SITE 2 AC2 7 HOH A 301 HOH A 353 HOH A 385 SITE 1 AC3 7 ASN A 8 SER A 100 VAL A 101 GLU A 102 SITE 2 AC3 7 HOH A 350 HOH A 373 LYS B 3 SITE 1 AC4 5 ARG A 47 GLY A 90 ASN A 91 LYS A 92 SITE 2 AC4 5 ASN A 93 SITE 1 AC5 8 SER B 57 TRP B 58 ASN B 91 LYS B 92 SITE 2 AC5 8 ASN B 93 LYS B 96 HOH B 308 HOH B 400 SITE 1 AC6 4 HIS B 99 SER B 100 SER B 103 HOH B 333 SITE 1 AC7 4 ARG B 47 ARG B 52 ARG B 53 HOH B 337 CRYST1 95.065 48.576 49.399 90.00 96.72 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010519 0.000000 0.001240 0.00000 SCALE2 0.000000 0.020586 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020383 0.00000