HEADER HYDROLASE 30-OCT-14 4RPC TITLE CRYSTAL STRUCTURE OF THE PUTATIVE ALPHA/BETA HYDROLASE FAMILY PROTEIN TITLE 2 FROM DESULFITOBACTERIUM HAFNIENSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ALPHA/BETA HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFITOBACTERIUM HAFNIENSE; SOURCE 3 ORGANISM_TAXID: 272564; SOURCE 4 STRAIN: DCB-2; SOURCE 5 GENE: DHAF_3963; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL-21 (DE3) MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.V.FILIPPOVA,Z.WAWRZAK,G.MINASOV,O.KIRYUKHINA,M.ENDRES,A.JOACHIMIAK, AUTHOR 2 W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 24-JAN-18 4RPC 1 JRNL REVDAT 2 22-NOV-17 4RPC 1 REMARK REVDAT 1 12-NOV-14 4RPC 0 JRNL AUTH E.V.FILIPPOVA,Z.WAWRZAK,G.MINASOV,O.KIRYUKHINA,M.ENDRES, JRNL AUTH 2 A.JOACHIMIAK,W.F.ANDERSON, JRNL AUTH 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL CRYSTAL STRUCTURE OF THE PUTATIVE ALPHA/BETA HYDROLASE JRNL TITL 2 FAMILY PROTEIN FROM DESULFITOBACTERIUM HAFNIENSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 25718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1362 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1755 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 233 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.93000 REMARK 3 B22 (A**2) : -0.83000 REMARK 3 B33 (A**2) : -1.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.38000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.258 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.071 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4027 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3948 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5442 ; 1.760 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9068 ; 0.854 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 498 ; 6.324 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 188 ;38.774 ;23.830 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 660 ;16.392 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;13.558 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 603 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4530 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 900 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1999 ; 1.464 ; 2.057 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1997 ; 1.462 ; 2.055 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2494 ; 2.268 ; 3.076 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2495 ; 2.268 ; 3.078 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2028 ; 2.342 ; 2.474 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2028 ; 2.336 ; 2.474 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2949 ; 3.701 ; 3.566 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4682 ; 6.265 ;17.737 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4683 ; 6.265 ;17.742 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 33 REMARK 3 ORIGIN FOR THE GROUP (A): 11.1145 25.4610 77.3079 REMARK 3 T TENSOR REMARK 3 T11: 0.1721 T22: 0.0077 REMARK 3 T33: 0.0446 T12: -0.0040 REMARK 3 T13: 0.0272 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 6.4564 L22: 0.9165 REMARK 3 L33: 6.0534 L12: -0.6839 REMARK 3 L13: -5.1027 L23: -0.2055 REMARK 3 S TENSOR REMARK 3 S11: -0.2859 S12: -0.1503 S13: -0.4088 REMARK 3 S21: 0.1055 S22: -0.0242 S23: 0.1387 REMARK 3 S31: 0.4957 S32: 0.1040 S33: 0.3101 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6687 28.1417 73.0672 REMARK 3 T TENSOR REMARK 3 T11: 0.1624 T22: 0.0170 REMARK 3 T33: 0.0180 T12: -0.0182 REMARK 3 T13: 0.0048 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 2.4890 L22: 1.0632 REMARK 3 L33: 2.2947 L12: -0.3245 REMARK 3 L13: -1.2432 L23: -0.4475 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: -0.0579 S13: -0.1398 REMARK 3 S21: -0.0591 S22: -0.0126 S23: 0.1113 REMARK 3 S31: 0.2079 S32: -0.0368 S33: 0.0124 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8819 39.0188 71.0513 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.0236 REMARK 3 T33: 0.0753 T12: 0.0169 REMARK 3 T13: 0.0290 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 8.2410 L22: 1.8671 REMARK 3 L33: 4.9986 L12: 1.0116 REMARK 3 L13: -1.6010 L23: -0.6262 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: 0.2629 S13: 0.0930 REMARK 3 S21: -0.1544 S22: 0.0890 S23: 0.1954 REMARK 3 S31: -0.2487 S32: -0.2843 S33: -0.1562 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): 25.5389 36.0418 67.4474 REMARK 3 T TENSOR REMARK 3 T11: 0.1602 T22: 0.0539 REMARK 3 T33: 0.0222 T12: 0.0132 REMARK 3 T13: 0.0154 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 2.0363 L22: 0.7557 REMARK 3 L33: 1.8222 L12: -0.0081 REMARK 3 L13: -1.0565 L23: 0.0792 REMARK 3 S TENSOR REMARK 3 S11: 0.1247 S12: -0.1750 S13: 0.1993 REMARK 3 S21: -0.0002 S22: -0.0088 S23: -0.0447 REMARK 3 S31: -0.0392 S32: 0.3040 S33: -0.1159 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3309 43.1646 79.7640 REMARK 3 T TENSOR REMARK 3 T11: 0.2384 T22: 0.1092 REMARK 3 T33: 0.0687 T12: -0.0613 REMARK 3 T13: 0.0456 T23: -0.0681 REMARK 3 L TENSOR REMARK 3 L11: 4.4216 L22: 1.9848 REMARK 3 L33: 2.6373 L12: -0.1665 REMARK 3 L13: -0.0584 L23: -0.6848 REMARK 3 S TENSOR REMARK 3 S11: 0.2767 S12: -0.3644 S13: 0.4971 REMARK 3 S21: 0.2761 S22: -0.2024 S23: -0.0017 REMARK 3 S31: -0.3548 S32: 0.2654 S33: -0.0743 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 70 REMARK 3 ORIGIN FOR THE GROUP (A): 45.5082 17.2149 41.3656 REMARK 3 T TENSOR REMARK 3 T11: 0.1028 T22: 0.0872 REMARK 3 T33: 0.0952 T12: -0.0058 REMARK 3 T13: 0.0180 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 1.8905 L22: 5.8649 REMARK 3 L33: 1.5806 L12: -0.5553 REMARK 3 L13: 0.4991 L23: 0.5106 REMARK 3 S TENSOR REMARK 3 S11: -0.1276 S12: 0.2954 S13: 0.3213 REMARK 3 S21: -0.2869 S22: 0.0607 S23: -0.5306 REMARK 3 S31: -0.1055 S32: 0.1395 S33: 0.0669 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 71 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): 57.4265 14.0075 38.4550 REMARK 3 T TENSOR REMARK 3 T11: 0.0870 T22: 0.1018 REMARK 3 T33: 0.1509 T12: 0.0463 REMARK 3 T13: 0.0285 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 1.2435 L22: 9.3588 REMARK 3 L33: 4.7832 L12: 2.6727 REMARK 3 L13: -0.1942 L23: -4.5381 REMARK 3 S TENSOR REMARK 3 S11: -0.1241 S12: 0.0756 S13: -0.1046 REMARK 3 S21: -0.2549 S22: 0.2142 S23: -0.2004 REMARK 3 S31: 0.0427 S32: -0.0944 S33: -0.0901 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 84 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): 52.7336 13.3775 52.1420 REMARK 3 T TENSOR REMARK 3 T11: 0.0925 T22: 0.0602 REMARK 3 T33: 0.2112 T12: 0.0539 REMARK 3 T13: -0.1030 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 2.8860 L22: 3.5932 REMARK 3 L33: 1.1865 L12: 0.7413 REMARK 3 L13: -0.4970 L23: -1.0002 REMARK 3 S TENSOR REMARK 3 S11: -0.3214 S12: -0.2098 S13: 0.2783 REMARK 3 S21: 0.2660 S22: 0.1052 S23: -0.7104 REMARK 3 S31: 0.0837 S32: 0.0878 S33: 0.2162 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 126 B 209 REMARK 3 ORIGIN FOR THE GROUP (A): 38.2143 6.4470 54.0266 REMARK 3 T TENSOR REMARK 3 T11: 0.1778 T22: 0.0722 REMARK 3 T33: 0.0350 T12: 0.0533 REMARK 3 T13: 0.0071 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 1.4166 L22: 2.2753 REMARK 3 L33: 1.1003 L12: -0.5769 REMARK 3 L13: -0.2386 L23: 0.5011 REMARK 3 S TENSOR REMARK 3 S11: -0.1997 S12: 0.0037 S13: -0.0459 REMARK 3 S21: 0.3332 S22: 0.0226 S23: 0.0567 REMARK 3 S31: 0.2077 S32: -0.0976 S33: 0.1771 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 210 B 258 REMARK 3 ORIGIN FOR THE GROUP (A): 44.9074 20.0978 59.4872 REMARK 3 T TENSOR REMARK 3 T11: 0.2295 T22: 0.1165 REMARK 3 T33: 0.1051 T12: 0.1078 REMARK 3 T13: -0.1363 T23: -0.0936 REMARK 3 L TENSOR REMARK 3 L11: 2.9484 L22: 3.5274 REMARK 3 L33: 0.9062 L12: -2.5358 REMARK 3 L13: -0.3262 L23: 0.7356 REMARK 3 S TENSOR REMARK 3 S11: -0.3093 S12: -0.2500 S13: 0.3458 REMARK 3 S21: 0.7074 S22: 0.4130 S23: -0.5568 REMARK 3 S31: 0.0141 S32: 0.0544 S33: -0.1037 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4RPC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27123 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M BIS REMARK 280 -TRIS, 25 % PEG3350, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.73650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 MSE A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 GLY A 6 REMARK 465 ASN A 7 REMARK 465 CYS A 8 REMARK 465 TYR A 259 REMARK 465 CYS A 260 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 MSE B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 5 REMARK 465 GLY B 6 REMARK 465 ASN B 7 REMARK 465 CYS B 8 REMARK 465 TYR B 259 REMARK 465 CYS B 260 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 123 CG - SE - CE ANGL. DEV. = -13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 93 -125.45 61.92 REMARK 500 ARG B 82 48.38 32.55 REMARK 500 SER B 93 -127.56 54.00 REMARK 500 ALA B 239 19.50 58.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 301 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC113091 RELATED DB: TARGETTRACK DBREF 4RPC A 1 260 UNP B8FSW0 B8FSW0_DESHD 1 260 DBREF 4RPC B 1 260 UNP B8FSW0 B8FSW0_DESHD 1 260 SEQADV 4RPC SER A -2 UNP B8FSW0 EXPRESSION TAG SEQADV 4RPC ASN A -1 UNP B8FSW0 EXPRESSION TAG SEQADV 4RPC ALA A 0 UNP B8FSW0 EXPRESSION TAG SEQADV 4RPC SER B -2 UNP B8FSW0 EXPRESSION TAG SEQADV 4RPC ASN B -1 UNP B8FSW0 EXPRESSION TAG SEQADV 4RPC ALA B 0 UNP B8FSW0 EXPRESSION TAG SEQRES 1 A 263 SER ASN ALA MSE SER MSE LYS LYS GLY ASN CYS LYS LEU SEQRES 2 A 263 HIS ARG MSE GLY GLU PRO HIS GLY PRO LYS VAL LEU LEU SEQRES 3 A 263 ILE HIS GLY ALA GLY PHE TYR TRP GLN THR CYS PHE ALA SEQRES 4 A 263 ARG ILE ILE ARG ASP LEU LYS ASP ARG TYR CYS LEU LEU SEQRES 5 A 263 ILE PRO GLU LEU GLU GLY HIS THR ALA HIS PRO ARG GLU SEQRES 6 A 263 TYR MSE VAL SER VAL GLU GLU THR ALA GLY LYS LEU GLY SEQRES 7 A 263 GLU ALA LEU GLU GLU LEU ARG VAL ASP LYS VAL GLN ALA SEQRES 8 A 263 ILE TYR GLY VAL SER LEU GLY ALA SER VAL ALA VAL GLU SEQRES 9 A 263 MSE ALA ILE ARG GLY GLU ILE LYS VAL MSE ASN LEU LEU SEQRES 10 A 263 LEU ASP GLY GLY GLN TYR GLU GLY MSE GLY GLU MSE THR SEQRES 11 A 263 GLU GLN TYR ALA ASN ILE MSE ALA ASP ALA PHE LEU ASN SEQRES 12 A 263 LEU LEU ALA GLY GLU HIS LEU PRO SER PRO VAL LYS GLU SEQRES 13 A 263 ASN MSE GLY PHE ALA ALA ASN ASN ASP VAL GLU VAL LEU SEQRES 14 A 263 GLN PRO LEU ILE TYR GLU HIS ILE THR ARG GLU ALA LEU SEQRES 15 A 263 LEU HIS ALA LEU LEU ALA ALA TYR ARG TYR ASP LEU LYS SEQRES 16 A 263 ALA LYS ASN ALA ARG VAL ASP ALA ARG VAL SER VAL LEU SEQRES 17 A 263 ILE GLY GLY ASN GLU ILE TYR GLY ALA GLN PHE THR PRO SEQRES 18 A 263 LEU LEU ALA GLU ILE SER ARG HIS PRO LEU ASP ILE TYR SEQRES 19 A 263 GLU PHE PRO ASN ARG GLY HIS ALA GLU VAL LEU SER LYS SEQRES 20 A 263 GLU PRO GLU LYS ILE SER ARG LEU ILE ARG GLU ILE LEU SEQRES 21 A 263 ASN TYR CYS SEQRES 1 B 263 SER ASN ALA MSE SER MSE LYS LYS GLY ASN CYS LYS LEU SEQRES 2 B 263 HIS ARG MSE GLY GLU PRO HIS GLY PRO LYS VAL LEU LEU SEQRES 3 B 263 ILE HIS GLY ALA GLY PHE TYR TRP GLN THR CYS PHE ALA SEQRES 4 B 263 ARG ILE ILE ARG ASP LEU LYS ASP ARG TYR CYS LEU LEU SEQRES 5 B 263 ILE PRO GLU LEU GLU GLY HIS THR ALA HIS PRO ARG GLU SEQRES 6 B 263 TYR MSE VAL SER VAL GLU GLU THR ALA GLY LYS LEU GLY SEQRES 7 B 263 GLU ALA LEU GLU GLU LEU ARG VAL ASP LYS VAL GLN ALA SEQRES 8 B 263 ILE TYR GLY VAL SER LEU GLY ALA SER VAL ALA VAL GLU SEQRES 9 B 263 MSE ALA ILE ARG GLY GLU ILE LYS VAL MSE ASN LEU LEU SEQRES 10 B 263 LEU ASP GLY GLY GLN TYR GLU GLY MSE GLY GLU MSE THR SEQRES 11 B 263 GLU GLN TYR ALA ASN ILE MSE ALA ASP ALA PHE LEU ASN SEQRES 12 B 263 LEU LEU ALA GLY GLU HIS LEU PRO SER PRO VAL LYS GLU SEQRES 13 B 263 ASN MSE GLY PHE ALA ALA ASN ASN ASP VAL GLU VAL LEU SEQRES 14 B 263 GLN PRO LEU ILE TYR GLU HIS ILE THR ARG GLU ALA LEU SEQRES 15 B 263 LEU HIS ALA LEU LEU ALA ALA TYR ARG TYR ASP LEU LYS SEQRES 16 B 263 ALA LYS ASN ALA ARG VAL ASP ALA ARG VAL SER VAL LEU SEQRES 17 B 263 ILE GLY GLY ASN GLU ILE TYR GLY ALA GLN PHE THR PRO SEQRES 18 B 263 LEU LEU ALA GLU ILE SER ARG HIS PRO LEU ASP ILE TYR SEQRES 19 B 263 GLU PHE PRO ASN ARG GLY HIS ALA GLU VAL LEU SER LYS SEQRES 20 B 263 GLU PRO GLU LYS ILE SER ARG LEU ILE ARG GLU ILE LEU SEQRES 21 B 263 ASN TYR CYS MODRES 4RPC MSE A 13 MET SELENOMETHIONINE MODRES 4RPC MSE A 64 MET SELENOMETHIONINE MODRES 4RPC MSE A 102 MET SELENOMETHIONINE MODRES 4RPC MSE A 111 MET SELENOMETHIONINE MODRES 4RPC MSE A 123 MET SELENOMETHIONINE MODRES 4RPC MSE A 126 MET SELENOMETHIONINE MODRES 4RPC MSE A 134 MET SELENOMETHIONINE MODRES 4RPC MSE A 155 MET SELENOMETHIONINE MODRES 4RPC MSE B 13 MET SELENOMETHIONINE MODRES 4RPC MSE B 64 MET SELENOMETHIONINE MODRES 4RPC MSE B 102 MET SELENOMETHIONINE MODRES 4RPC MSE B 111 MET SELENOMETHIONINE MODRES 4RPC MSE B 123 MET SELENOMETHIONINE MODRES 4RPC MSE B 126 MET SELENOMETHIONINE MODRES 4RPC MSE B 134 MET SELENOMETHIONINE MODRES 4RPC MSE B 155 MET SELENOMETHIONINE HET MSE A 13 8 HET MSE A 64 8 HET MSE A 102 8 HET MSE A 111 8 HET MSE A 123 8 HET MSE A 126 8 HET MSE A 134 8 HET MSE A 155 8 HET MSE B 13 8 HET MSE B 64 8 HET MSE B 102 8 HET MSE B 111 8 HET MSE B 123 8 HET MSE B 126 8 HET MSE B 134 8 HET MSE B 155 8 HET PG4 A 301 7 HET TRS A 302 8 HETNAM MSE SELENOMETHIONINE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 3 PG4 C8 H18 O5 FORMUL 4 TRS C4 H12 N O3 1+ FORMUL 5 HOH *233(H2 O) HELIX 1 1 TYR A 30 PHE A 35 1 6 HELIX 2 2 PHE A 35 LYS A 43 1 9 HELIX 3 3 SER A 66 LEU A 81 1 16 HELIX 4 4 SER A 93 GLY A 106 1 14 HELIX 5 5 MSE A 123 GLU A 125 5 3 HELIX 6 6 MSE A 126 ALA A 143 1 18 HELIX 7 7 PRO A 150 MSE A 155 1 6 HELIX 8 8 ASN A 161 GLN A 167 1 7 HELIX 9 9 PRO A 168 ILE A 170 5 3 HELIX 10 10 THR A 175 TYR A 189 1 15 HELIX 11 11 LEU A 191 ASN A 195 5 5 HELIX 12 12 PHE A 216 SER A 224 1 9 HELIX 13 13 ALA A 239 GLU A 245 1 7 HELIX 14 14 GLU A 245 LEU A 257 1 13 HELIX 15 15 TYR B 30 LYS B 43 1 14 HELIX 16 16 SER B 66 LEU B 81 1 16 HELIX 17 17 SER B 93 GLY B 106 1 14 HELIX 18 18 MSE B 123 GLU B 125 5 3 HELIX 19 19 MSE B 126 ALA B 143 1 18 HELIX 20 20 PRO B 150 MSE B 155 1 6 HELIX 21 21 ASN B 161 GLN B 167 1 7 HELIX 22 22 PRO B 168 ILE B 170 5 3 HELIX 23 23 THR B 175 TYR B 189 1 15 HELIX 24 24 ASP B 190 ASN B 195 1 6 HELIX 25 25 GLY B 213 GLN B 215 5 3 HELIX 26 26 PHE B 216 SER B 224 1 9 HELIX 27 27 ALA B 239 GLU B 245 1 7 HELIX 28 28 GLU B 245 LEU B 257 1 13 SHEET 1 A 7 LEU A 10 GLY A 14 0 SHEET 2 A 7 CYS A 47 PRO A 51 -1 O ILE A 50 N HIS A 11 SHEET 3 A 7 LYS A 20 ILE A 24 1 N VAL A 21 O CYS A 47 SHEET 4 A 7 ALA A 88 VAL A 92 1 O ALA A 88 N LEU A 22 SHEET 5 A 7 ASN A 112 ASP A 116 1 O LEU A 114 N ILE A 89 SHEET 6 A 7 ARG A 201 GLY A 207 1 O SER A 203 N LEU A 113 SHEET 7 A 7 ASP A 229 PHE A 233 1 O TYR A 231 N VAL A 204 SHEET 1 B 2 LYS A 85 VAL A 86 0 SHEET 2 B 2 LYS A 109 VAL A 110 1 O LYS A 109 N VAL A 86 SHEET 1 C 7 LEU B 10 GLY B 14 0 SHEET 2 C 7 CYS B 47 PRO B 51 -1 O ILE B 50 N HIS B 11 SHEET 3 C 7 LYS B 20 ILE B 24 1 N VAL B 21 O CYS B 47 SHEET 4 C 7 LYS B 85 VAL B 92 1 O TYR B 90 N ILE B 24 SHEET 5 C 7 LYS B 109 ASP B 116 1 O LEU B 114 N ILE B 89 SHEET 6 C 7 ARG B 201 GLY B 207 1 O SER B 203 N LEU B 113 SHEET 7 C 7 ASP B 229 PHE B 233 1 O TYR B 231 N VAL B 204 LINK C ARG A 12 N MSE A 13 1555 1555 1.31 LINK C MSE A 13 N GLY A 14 1555 1555 1.33 LINK C TYR A 63 N MSE A 64 1555 1555 1.32 LINK C MSE A 64 N VAL A 65 1555 1555 1.33 LINK C GLU A 101 N MSE A 102 1555 1555 1.31 LINK C MSE A 102 N ALA A 103 1555 1555 1.34 LINK C VAL A 110 N MSE A 111 1555 1555 1.32 LINK C MSE A 111 N ASN A 112 1555 1555 1.33 LINK C GLY A 122 N MSE A 123 1555 1555 1.31 LINK C MSE A 123 N GLY A 124 1555 1555 1.31 LINK C GLU A 125 N MSE A 126 1555 1555 1.35 LINK C MSE A 126 N THR A 127 1555 1555 1.33 LINK C ILE A 133 N MSE A 134 1555 1555 1.31 LINK C MSE A 134 N ALA A 135 1555 1555 1.34 LINK C ASN A 154 N MSE A 155 1555 1555 1.33 LINK C MSE A 155 N GLY A 156 1555 1555 1.34 LINK C ARG B 12 N MSE B 13 1555 1555 1.32 LINK C MSE B 13 N GLY B 14 1555 1555 1.32 LINK C TYR B 63 N MSE B 64 1555 1555 1.33 LINK C MSE B 64 N VAL B 65 1555 1555 1.32 LINK C GLU B 101 N MSE B 102 1555 1555 1.32 LINK C MSE B 102 N ALA B 103 1555 1555 1.32 LINK C VAL B 110 N MSE B 111 1555 1555 1.35 LINK C MSE B 111 N ASN B 112 1555 1555 1.34 LINK C GLY B 122 N MSE B 123 1555 1555 1.33 LINK C MSE B 123 N GLY B 124 1555 1555 1.33 LINK C GLU B 125 N MSE B 126 1555 1555 1.33 LINK C MSE B 126 N THR B 127 1555 1555 1.33 LINK C ILE B 133 N MSE B 134 1555 1555 1.33 LINK C MSE B 134 N ALA B 135 1555 1555 1.33 LINK C ASN B 154 N MSE B 155 1555 1555 1.33 LINK C MSE B 155 N GLY B 156 1555 1555 1.33 CISPEP 1 SER A 149 PRO A 150 0 2.33 CISPEP 2 SER B 149 PRO B 150 0 1.53 SITE 1 AC1 1 TRS A 302 SITE 1 AC2 4 SER A 149 PRO A 150 PG4 A 301 TYR B 212 CRYST1 61.661 45.473 82.787 90.00 90.56 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016218 0.000000 0.000159 0.00000 SCALE2 0.000000 0.021991 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012080 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.931942 -0.258140 0.254652 49.14965 1 MTRIX2 2 0.261715 0.007228 0.965118 -26.30386 1 MTRIX3 2 -0.250976 0.966080 0.060823 67.89312 1