data_4RPZ # _entry.id 4RPZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RPZ pdb_00004rpz 10.2210/pdb4rpz/pdb NDB NA3282 ? ? RCSB RCSB087652 ? ? WWPDB D_1000087652 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-15 2 'Structure model' 1 1 2015-05-06 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.value' 26 3 'Structure model' '_struct_conn.pdbx_dist_value' 27 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 28 3 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 29 3 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 30 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 31 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 32 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 33 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 34 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 37 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 38 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 44 3 'Structure model' '_struct_ref_seq_dif.details' 45 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 46 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 47 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RPZ _pdbx_database_status.recvd_initial_deposition_date 2014-10-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.content_type 4RPX PDB . unspecified 4RPY PDB . unspecified 4RQ0 PDB . unspecified 4RQ1 PDB . unspecified 4RQ2 PDB . unspecified 4RQ3 PDB . unspecified 4RQ4 PDB . unspecified 4RQ5 PDB . unspecified 4RQ6 PDB . unspecified 4RQ7 PDB . unspecified 4RQ8 PDB . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vyas, R.' 1 'Reed, A.J.' 2 'Suo, Z.' 3 # _citation.id primary _citation.title 'Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 137 _citation.page_first 5225 _citation.page_last 5230 _citation.year 2015 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25825995 _citation.pdbx_database_id_DOI 10.1021/jacs.5b02109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vyas, R.' 1 ? primary 'Reed, A.J.' 2 ? primary 'Tokarsky, E.J.' 3 ? primary 'Suo, Z.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 39258.785 1 '2.7.7.7, 4.2.99.-' ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3') ; 3350.185 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4885.157 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 7 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 8 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 9 non-polymer syn "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" 467.157 2 ? ? ? ? 10 water nat water 18.015 158 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 '5-mer phosphorylated Downstream Primer' 3 '10-mer Primer' 4 '16-mer Template' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)(DC)' GCTGATGCGCC P ? 4 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(8OG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGGCGCATCAGC T ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 'CHLORIDE ION' CL 8 PYROPHOSPHATE PPV 9 "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" DCP 10 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 MET n 1 4 SER n 1 5 LYS n 1 6 ARG n 1 7 LYS n 1 8 ALA n 1 9 PRO n 1 10 GLN n 1 11 GLU n 1 12 THR n 1 13 LEU n 1 14 ASN n 1 15 GLY n 1 16 GLY n 1 17 ILE n 1 18 THR n 1 19 ASP n 1 20 MET n 1 21 LEU n 1 22 THR n 1 23 GLU n 1 24 LEU n 1 25 ALA n 1 26 ASN n 1 27 PHE n 1 28 GLU n 1 29 LYS n 1 30 ASN n 1 31 VAL n 1 32 SER n 1 33 GLN n 1 34 ALA n 1 35 ILE n 1 36 HIS n 1 37 LYS n 1 38 TYR n 1 39 ASN n 1 40 ALA n 1 41 TYR n 1 42 ARG n 1 43 LYS n 1 44 ALA n 1 45 ALA n 1 46 SER n 1 47 VAL n 1 48 ILE n 1 49 ALA n 1 50 LYS n 1 51 TYR n 1 52 PRO n 1 53 HIS n 1 54 LYS n 1 55 ILE n 1 56 LYS n 1 57 SER n 1 58 GLY n 1 59 ALA n 1 60 GLU n 1 61 ALA n 1 62 LYS n 1 63 LYS n 1 64 LEU n 1 65 PRO n 1 66 GLY n 1 67 VAL n 1 68 GLY n 1 69 THR n 1 70 LYS n 1 71 ILE n 1 72 ALA n 1 73 GLU n 1 74 LYS n 1 75 ILE n 1 76 ASP n 1 77 GLU n 1 78 PHE n 1 79 LEU n 1 80 ALA n 1 81 THR n 1 82 GLY n 1 83 LYS n 1 84 LEU n 1 85 ARG n 1 86 LYS n 1 87 LEU n 1 88 GLU n 1 89 LYS n 1 90 ILE n 1 91 ARG n 1 92 GLN n 1 93 ASP n 1 94 ASP n 1 95 THR n 1 96 SER n 1 97 SER n 1 98 SER n 1 99 ILE n 1 100 ASN n 1 101 PHE n 1 102 LEU n 1 103 THR n 1 104 ARG n 1 105 VAL n 1 106 SER n 1 107 GLY n 1 108 ILE n 1 109 GLY n 1 110 PRO n 1 111 SER n 1 112 ALA n 1 113 ALA n 1 114 ARG n 1 115 LYS n 1 116 PHE n 1 117 VAL n 1 118 ASP n 1 119 GLU n 1 120 GLY n 1 121 ILE n 1 122 LYS n 1 123 THR n 1 124 LEU n 1 125 GLU n 1 126 ASP n 1 127 LEU n 1 128 ARG n 1 129 LYS n 1 130 ASN n 1 131 GLU n 1 132 ASP n 1 133 LYS n 1 134 LEU n 1 135 ASN n 1 136 HIS n 1 137 HIS n 1 138 GLN n 1 139 ARG n 1 140 ILE n 1 141 GLY n 1 142 LEU n 1 143 LYS n 1 144 TYR n 1 145 PHE n 1 146 GLY n 1 147 ASP n 1 148 PHE n 1 149 GLU n 1 150 LYS n 1 151 ARG n 1 152 ILE n 1 153 PRO n 1 154 ARG n 1 155 GLU n 1 156 GLU n 1 157 MET n 1 158 LEU n 1 159 GLN n 1 160 MET n 1 161 GLN n 1 162 ASP n 1 163 ILE n 1 164 VAL n 1 165 LEU n 1 166 ASN n 1 167 GLU n 1 168 VAL n 1 169 LYS n 1 170 LYS n 1 171 VAL n 1 172 ASP n 1 173 SER n 1 174 GLU n 1 175 TYR n 1 176 ILE n 1 177 ALA n 1 178 THR n 1 179 VAL n 1 180 CYS n 1 181 GLY n 1 182 SER n 1 183 PHE n 1 184 ARG n 1 185 ARG n 1 186 GLY n 1 187 ALA n 1 188 GLU n 1 189 SER n 1 190 SER n 1 191 GLY n 1 192 ASP n 1 193 MET n 1 194 ASP n 1 195 VAL n 1 196 LEU n 1 197 LEU n 1 198 THR n 1 199 HIS n 1 200 PRO n 1 201 SER n 1 202 PHE n 1 203 THR n 1 204 SER n 1 205 GLU n 1 206 SER n 1 207 THR n 1 208 LYS n 1 209 GLN n 1 210 PRO n 1 211 LYS n 1 212 LEU n 1 213 LEU n 1 214 HIS n 1 215 GLN n 1 216 VAL n 1 217 VAL n 1 218 GLU n 1 219 GLN n 1 220 LEU n 1 221 GLN n 1 222 LYS n 1 223 VAL n 1 224 HIS n 1 225 PHE n 1 226 ILE n 1 227 THR n 1 228 ASP n 1 229 THR n 1 230 LEU n 1 231 SER n 1 232 LYS n 1 233 GLY n 1 234 GLU n 1 235 THR n 1 236 LYS n 1 237 PHE n 1 238 MET n 1 239 GLY n 1 240 VAL n 1 241 CYS n 1 242 GLN n 1 243 LEU n 1 244 PRO n 1 245 SER n 1 246 LYS n 1 247 ASN n 1 248 ASP n 1 249 GLU n 1 250 LYS n 1 251 GLU n 1 252 TYR n 1 253 PRO n 1 254 HIS n 1 255 ARG n 1 256 ARG n 1 257 ILE n 1 258 ASP n 1 259 ILE n 1 260 ARG n 1 261 LEU n 1 262 ILE n 1 263 PRO n 1 264 LYS n 1 265 ASP n 1 266 GLN n 1 267 TYR n 1 268 TYR n 1 269 CYS n 1 270 GLY n 1 271 VAL n 1 272 LEU n 1 273 TYR n 1 274 PHE n 1 275 THR n 1 276 GLY n 1 277 SER n 1 278 ASP n 1 279 ILE n 1 280 PHE n 1 281 ASN n 1 282 LYS n 1 283 ASN n 1 284 MET n 1 285 ARG n 1 286 ALA n 1 287 HIS n 1 288 ALA n 1 289 LEU n 1 290 GLU n 1 291 LYS n 1 292 GLY n 1 293 PHE n 1 294 THR n 1 295 ILE n 1 296 ASN n 1 297 GLU n 1 298 TYR n 1 299 THR n 1 300 ILE n 1 301 ARG n 1 302 PRO n 1 303 LEU n 1 304 GLY n 1 305 VAL n 1 306 THR n 1 307 GLY n 1 308 VAL n 1 309 ALA n 1 310 GLY n 1 311 GLU n 1 312 PRO n 1 313 LEU n 1 314 PRO n 1 315 VAL n 1 316 ASP n 1 317 SER n 1 318 GLU n 1 319 LYS n 1 320 ASP n 1 321 ILE n 1 322 PHE n 1 323 ASP n 1 324 TYR n 1 325 ILE n 1 326 GLN n 1 327 TRP n 1 328 LYS n 1 329 TYR n 1 330 ARG n 1 331 GLU n 1 332 PRO n 1 333 LYS n 1 334 ASP n 1 335 ARG n 1 336 SER n 1 337 GLU n 1 338 HIS n 1 339 HIS n 1 340 HIS n 1 341 HIS n 1 342 HIS n 1 343 HIS n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DC n 3 11 DC n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 8OG n 4 7 DG n 4 8 DC n 4 9 DG n 4 10 DC n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DG n 4 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POL B, POLB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 ? 3 1 sample ? ? 'synthetic construct' ? 32630 ? 4 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DCP non-polymer . "2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE" ? 'C9 H16 N3 O13 P3' 467.157 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 GLY 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 SER 4 2 ? ? ? A . n A 1 5 LYS 5 3 ? ? ? A . n A 1 6 ARG 6 4 ? ? ? A . n A 1 7 LYS 7 5 ? ? ? A . n A 1 8 ALA 8 6 ? ? ? A . n A 1 9 PRO 9 7 ? ? ? A . n A 1 10 GLN 10 8 ? ? ? A . n A 1 11 GLU 11 9 ? ? ? A . n A 1 12 THR 12 10 10 THR THR A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 ASN 14 12 12 ASN ASN A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 ILE 17 15 15 ILE ILE A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 MET 20 18 18 MET MET A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 THR 22 20 20 THR THR A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 LEU 24 22 22 LEU LEU A . n A 1 25 ALA 25 23 23 ALA ALA A . n A 1 26 ASN 26 24 24 ASN ASN A . n A 1 27 PHE 27 25 25 PHE PHE A . n A 1 28 GLU 28 26 26 GLU GLU A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 ASN 30 28 28 ASN ASN A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 SER 32 30 30 SER SER A . n A 1 33 GLN 33 31 31 GLN GLN A . n A 1 34 ALA 34 32 32 ALA ALA A . n A 1 35 ILE 35 33 33 ILE ILE A . n A 1 36 HIS 36 34 34 HIS HIS A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 TYR 38 36 36 TYR TYR A . n A 1 39 ASN 39 37 37 ASN ASN A . n A 1 40 ALA 40 38 38 ALA ALA A . n A 1 41 TYR 41 39 39 TYR TYR A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 ALA 44 42 42 ALA ALA A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 SER 46 44 44 SER SER A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 ILE 48 46 46 ILE ILE A . n A 1 49 ALA 49 47 47 ALA ALA A . n A 1 50 LYS 50 48 48 LYS LYS A . n A 1 51 TYR 51 49 49 TYR TYR A . n A 1 52 PRO 52 50 50 PRO PRO A . n A 1 53 HIS 53 51 51 HIS HIS A . n A 1 54 LYS 54 52 52 LYS LYS A . n A 1 55 ILE 55 53 53 ILE ILE A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 SER 57 55 55 SER SER A . n A 1 58 GLY 58 56 56 GLY GLY A . n A 1 59 ALA 59 57 57 ALA ALA A . n A 1 60 GLU 60 58 58 GLU GLU A . n A 1 61 ALA 61 59 59 ALA ALA A . n A 1 62 LYS 62 60 60 LYS LYS A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 LEU 64 62 62 LEU LEU A . n A 1 65 PRO 65 63 63 PRO PRO A . n A 1 66 GLY 66 64 64 GLY GLY A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 GLY 68 66 66 GLY GLY A . n A 1 69 THR 69 67 67 THR THR A . n A 1 70 LYS 70 68 68 LYS LYS A . n A 1 71 ILE 71 69 69 ILE ILE A . n A 1 72 ALA 72 70 70 ALA ALA A . n A 1 73 GLU 73 71 71 GLU GLU A . n A 1 74 LYS 74 72 72 LYS LYS A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 ASP 76 74 74 ASP ASP A . n A 1 77 GLU 77 75 75 GLU GLU A . n A 1 78 PHE 78 76 76 PHE PHE A . n A 1 79 LEU 79 77 77 LEU LEU A . n A 1 80 ALA 80 78 78 ALA ALA A . n A 1 81 THR 81 79 79 THR THR A . n A 1 82 GLY 82 80 80 GLY GLY A . n A 1 83 LYS 83 81 81 LYS LYS A . n A 1 84 LEU 84 82 82 LEU LEU A . n A 1 85 ARG 85 83 83 ARG ARG A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 GLU 88 86 86 GLU GLU A . n A 1 89 LYS 89 87 87 LYS LYS A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 ARG 91 89 89 ARG ARG A . n A 1 92 GLN 92 90 90 GLN GLN A . n A 1 93 ASP 93 91 91 ASP ASP A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 THR 95 93 93 THR THR A . n A 1 96 SER 96 94 94 SER SER A . n A 1 97 SER 97 95 95 SER SER A . n A 1 98 SER 98 96 96 SER SER A . n A 1 99 ILE 99 97 97 ILE ILE A . n A 1 100 ASN 100 98 98 ASN ASN A . n A 1 101 PHE 101 99 99 PHE PHE A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 THR 103 101 101 THR THR A . n A 1 104 ARG 104 102 102 ARG ARG A . n A 1 105 VAL 105 103 103 VAL VAL A . n A 1 106 SER 106 104 104 SER SER A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 GLY 109 107 107 GLY GLY A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 SER 111 109 109 SER SER A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 ALA 113 111 111 ALA ALA A . n A 1 114 ARG 114 112 112 ARG ARG A . n A 1 115 LYS 115 113 113 LYS LYS A . n A 1 116 PHE 116 114 114 PHE PHE A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 ASP 118 116 116 ASP ASP A . n A 1 119 GLU 119 117 117 GLU GLU A . n A 1 120 GLY 120 118 118 GLY GLY A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 THR 123 121 121 THR THR A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 GLU 125 123 123 GLU GLU A . n A 1 126 ASP 126 124 124 ASP ASP A . n A 1 127 LEU 127 125 125 LEU LEU A . n A 1 128 ARG 128 126 126 ARG ARG A . n A 1 129 LYS 129 127 127 LYS LYS A . n A 1 130 ASN 130 128 128 ASN ASN A . n A 1 131 GLU 131 129 129 GLU GLU A . n A 1 132 ASP 132 130 130 ASP ASP A . n A 1 133 LYS 133 131 131 LYS LYS A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ASN 135 133 133 ASN ASN A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 HIS 137 135 135 HIS HIS A . n A 1 138 GLN 138 136 136 GLN GLN A . n A 1 139 ARG 139 137 137 ARG ARG A . n A 1 140 ILE 140 138 138 ILE ILE A . n A 1 141 GLY 141 139 139 GLY GLY A . n A 1 142 LEU 142 140 140 LEU LEU A . n A 1 143 LYS 143 141 141 LYS LYS A . n A 1 144 TYR 144 142 142 TYR TYR A . n A 1 145 PHE 145 143 143 PHE PHE A . n A 1 146 GLY 146 144 144 GLY GLY A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 PHE 148 146 146 PHE PHE A . n A 1 149 GLU 149 147 147 GLU GLU A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 ARG 151 149 149 ARG ARG A . n A 1 152 ILE 152 150 150 ILE ILE A . n A 1 153 PRO 153 151 151 PRO PRO A . n A 1 154 ARG 154 152 152 ARG ARG A . n A 1 155 GLU 155 153 153 GLU GLU A . n A 1 156 GLU 156 154 154 GLU GLU A . n A 1 157 MET 157 155 155 MET MET A . n A 1 158 LEU 158 156 156 LEU LEU A . n A 1 159 GLN 159 157 157 GLN GLN A . n A 1 160 MET 160 158 158 MET MET A . n A 1 161 GLN 161 159 159 GLN GLN A . n A 1 162 ASP 162 160 160 ASP ASP A . n A 1 163 ILE 163 161 161 ILE ILE A . n A 1 164 VAL 164 162 162 VAL VAL A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 ASN 166 164 164 ASN ASN A . n A 1 167 GLU 167 165 165 GLU GLU A . n A 1 168 VAL 168 166 166 VAL VAL A . n A 1 169 LYS 169 167 167 LYS LYS A . n A 1 170 LYS 170 168 168 LYS LYS A . n A 1 171 VAL 171 169 169 VAL VAL A . n A 1 172 ASP 172 170 170 ASP ASP A . n A 1 173 SER 173 171 171 SER SER A . n A 1 174 GLU 174 172 172 GLU GLU A . n A 1 175 TYR 175 173 173 TYR TYR A . n A 1 176 ILE 176 174 174 ILE ILE A . n A 1 177 ALA 177 175 175 ALA ALA A . n A 1 178 THR 178 176 176 THR THR A . n A 1 179 VAL 179 177 177 VAL VAL A . n A 1 180 CYS 180 178 178 CYS CYS A . n A 1 181 GLY 181 179 179 GLY GLY A . n A 1 182 SER 182 180 180 SER SER A . n A 1 183 PHE 183 181 181 PHE PHE A . n A 1 184 ARG 184 182 182 ARG ARG A . n A 1 185 ARG 185 183 183 ARG ARG A . n A 1 186 GLY 186 184 184 GLY GLY A . n A 1 187 ALA 187 185 185 ALA ALA A . n A 1 188 GLU 188 186 186 GLU GLU A . n A 1 189 SER 189 187 187 SER SER A . n A 1 190 SER 190 188 188 SER SER A . n A 1 191 GLY 191 189 189 GLY GLY A . n A 1 192 ASP 192 190 190 ASP ASP A . n A 1 193 MET 193 191 191 MET MET A . n A 1 194 ASP 194 192 192 ASP ASP A . n A 1 195 VAL 195 193 193 VAL VAL A . n A 1 196 LEU 196 194 194 LEU LEU A . n A 1 197 LEU 197 195 195 LEU LEU A . n A 1 198 THR 198 196 196 THR THR A . n A 1 199 HIS 199 197 197 HIS HIS A . n A 1 200 PRO 200 198 198 PRO PRO A . n A 1 201 SER 201 199 199 SER SER A . n A 1 202 PHE 202 200 200 PHE PHE A . n A 1 203 THR 203 201 201 THR THR A . n A 1 204 SER 204 202 202 SER SER A . n A 1 205 GLU 205 203 203 GLU GLU A . n A 1 206 SER 206 204 204 SER SER A . n A 1 207 THR 207 205 205 THR THR A . n A 1 208 LYS 208 206 206 LYS LYS A . n A 1 209 GLN 209 207 207 GLN GLN A . n A 1 210 PRO 210 208 208 PRO PRO A . n A 1 211 LYS 211 209 209 LYS LYS A . n A 1 212 LEU 212 210 210 LEU LEU A . n A 1 213 LEU 213 211 211 LEU LEU A . n A 1 214 HIS 214 212 212 HIS HIS A . n A 1 215 GLN 215 213 213 GLN GLN A . n A 1 216 VAL 216 214 214 VAL VAL A . n A 1 217 VAL 217 215 215 VAL VAL A . n A 1 218 GLU 218 216 216 GLU GLU A . n A 1 219 GLN 219 217 217 GLN GLN A . n A 1 220 LEU 220 218 218 LEU LEU A . n A 1 221 GLN 221 219 219 GLN GLN A . n A 1 222 LYS 222 220 220 LYS LYS A . n A 1 223 VAL 223 221 221 VAL VAL A . n A 1 224 HIS 224 222 222 HIS HIS A . n A 1 225 PHE 225 223 223 PHE PHE A . n A 1 226 ILE 226 224 224 ILE ILE A . n A 1 227 THR 227 225 225 THR THR A . n A 1 228 ASP 228 226 226 ASP ASP A . n A 1 229 THR 229 227 227 THR THR A . n A 1 230 LEU 230 228 228 LEU LEU A . n A 1 231 SER 231 229 229 SER SER A . n A 1 232 LYS 232 230 230 LYS LYS A . n A 1 233 GLY 233 231 231 GLY GLY A . n A 1 234 GLU 234 232 232 GLU GLU A . n A 1 235 THR 235 233 233 THR THR A . n A 1 236 LYS 236 234 234 LYS LYS A . n A 1 237 PHE 237 235 235 PHE PHE A . n A 1 238 MET 238 236 236 MET MET A . n A 1 239 GLY 239 237 237 GLY GLY A . n A 1 240 VAL 240 238 238 VAL VAL A . n A 1 241 CYS 241 239 239 CYS CYS A . n A 1 242 GLN 242 240 240 GLN GLN A . n A 1 243 LEU 243 241 241 LEU LEU A . n A 1 244 PRO 244 242 242 PRO PRO A . n A 1 245 SER 245 243 243 SER SER A . n A 1 246 LYS 246 244 244 LYS LYS A . n A 1 247 ASN 247 245 245 ASN ASN A . n A 1 248 ASP 248 246 246 ASP ASP A . n A 1 249 GLU 249 247 247 GLU GLU A . n A 1 250 LYS 250 248 248 LYS LYS A . n A 1 251 GLU 251 249 249 GLU GLU A . n A 1 252 TYR 252 250 250 TYR TYR A . n A 1 253 PRO 253 251 251 PRO PRO A . n A 1 254 HIS 254 252 252 HIS HIS A . n A 1 255 ARG 255 253 253 ARG ARG A . n A 1 256 ARG 256 254 254 ARG ARG A . n A 1 257 ILE 257 255 255 ILE ILE A . n A 1 258 ASP 258 256 256 ASP ASP A . n A 1 259 ILE 259 257 257 ILE ILE A . n A 1 260 ARG 260 258 258 ARG ARG A . n A 1 261 LEU 261 259 259 LEU LEU A . n A 1 262 ILE 262 260 260 ILE ILE A . n A 1 263 PRO 263 261 261 PRO PRO A . n A 1 264 LYS 264 262 262 LYS LYS A . n A 1 265 ASP 265 263 263 ASP ASP A . n A 1 266 GLN 266 264 264 GLN GLN A . n A 1 267 TYR 267 265 265 TYR TYR A . n A 1 268 TYR 268 266 266 TYR TYR A . n A 1 269 CYS 269 267 267 CYS CYS A . n A 1 270 GLY 270 268 268 GLY GLY A . n A 1 271 VAL 271 269 269 VAL VAL A . n A 1 272 LEU 272 270 270 LEU LEU A . n A 1 273 TYR 273 271 271 TYR TYR A . n A 1 274 PHE 274 272 272 PHE PHE A . n A 1 275 THR 275 273 273 THR THR A . n A 1 276 GLY 276 274 274 GLY GLY A . n A 1 277 SER 277 275 275 SER SER A . n A 1 278 ASP 278 276 276 ASP ASP A . n A 1 279 ILE 279 277 277 ILE ILE A . n A 1 280 PHE 280 278 278 PHE PHE A . n A 1 281 ASN 281 279 279 ASN ASN A . n A 1 282 LYS 282 280 280 LYS LYS A . n A 1 283 ASN 283 281 281 ASN ASN A . n A 1 284 MET 284 282 282 MET MET A . n A 1 285 ARG 285 283 283 ARG ARG A . n A 1 286 ALA 286 284 284 ALA ALA A . n A 1 287 HIS 287 285 285 HIS HIS A . n A 1 288 ALA 288 286 286 ALA ALA A . n A 1 289 LEU 289 287 287 LEU LEU A . n A 1 290 GLU 290 288 288 GLU GLU A . n A 1 291 LYS 291 289 289 LYS LYS A . n A 1 292 GLY 292 290 290 GLY GLY A . n A 1 293 PHE 293 291 291 PHE PHE A . n A 1 294 THR 294 292 292 THR THR A . n A 1 295 ILE 295 293 293 ILE ILE A . n A 1 296 ASN 296 294 294 ASN ASN A . n A 1 297 GLU 297 295 295 GLU GLU A . n A 1 298 TYR 298 296 296 TYR TYR A . n A 1 299 THR 299 297 297 THR THR A . n A 1 300 ILE 300 298 298 ILE ILE A . n A 1 301 ARG 301 299 299 ARG ARG A . n A 1 302 PRO 302 300 300 PRO PRO A . n A 1 303 LEU 303 301 301 LEU LEU A . n A 1 304 GLY 304 302 302 GLY GLY A . n A 1 305 VAL 305 303 303 VAL VAL A . n A 1 306 THR 306 304 304 THR THR A . n A 1 307 GLY 307 305 305 GLY GLY A . n A 1 308 VAL 308 306 306 VAL VAL A . n A 1 309 ALA 309 307 307 ALA ALA A . n A 1 310 GLY 310 308 308 GLY GLY A . n A 1 311 GLU 311 309 309 GLU GLU A . n A 1 312 PRO 312 310 310 PRO PRO A . n A 1 313 LEU 313 311 311 LEU LEU A . n A 1 314 PRO 314 312 312 PRO PRO A . n A 1 315 VAL 315 313 313 VAL VAL A . n A 1 316 ASP 316 314 314 ASP ASP A . n A 1 317 SER 317 315 315 SER SER A . n A 1 318 GLU 318 316 316 GLU GLU A . n A 1 319 LYS 319 317 317 LYS LYS A . n A 1 320 ASP 320 318 318 ASP ASP A . n A 1 321 ILE 321 319 319 ILE ILE A . n A 1 322 PHE 322 320 320 PHE PHE A . n A 1 323 ASP 323 321 321 ASP ASP A . n A 1 324 TYR 324 322 322 TYR TYR A . n A 1 325 ILE 325 323 323 ILE ILE A . n A 1 326 GLN 326 324 324 GLN GLN A . n A 1 327 TRP 327 325 325 TRP TRP A . n A 1 328 LYS 328 326 326 LYS LYS A . n A 1 329 TYR 329 327 327 TYR TYR A . n A 1 330 ARG 330 328 328 ARG ARG A . n A 1 331 GLU 331 329 329 GLU GLU A . n A 1 332 PRO 332 330 330 PRO PRO A . n A 1 333 LYS 333 331 331 LYS LYS A . n A 1 334 ASP 334 332 332 ASP ASP A . n A 1 335 ARG 335 333 333 ARG ARG A . n A 1 336 SER 336 334 334 SER SER A . n A 1 337 GLU 337 335 335 GLU GLU A . n A 1 338 HIS 338 336 ? ? ? A . n A 1 339 HIS 339 337 ? ? ? A . n A 1 340 HIS 340 338 ? ? ? A . n A 1 341 HIS 341 339 ? ? ? A . n A 1 342 HIS 342 340 ? ? ? A . n A 1 343 HIS 343 341 ? ? ? A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DC 10 10 10 DC DC P . n C 3 11 DC 11 11 1 DC DC P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 8OG 6 6 6 8OG 8OG T . n D 4 7 DG 7 7 7 DG DG T . n D 4 8 DC 8 8 8 DC DC T . n D 4 9 DG 9 9 9 DG DG T . n D 4 10 DC 10 10 10 DC DC T . n D 4 11 DA 11 11 11 DA DA T . n D 4 12 DT 12 12 12 DT DT T . n D 4 13 DC 13 13 13 DC DC T . n D 4 14 DA 14 14 14 DA DA T . n D 4 15 DG 15 15 15 DG DG T . n D 4 16 DC 16 16 16 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 401 3 MG MG A . F 5 MG 1 402 4 MG MG A . G 6 NA 1 403 7 NA NA A . H 6 NA 1 404 8 NA NA A . I 6 NA 1 405 9 NA NA A . J 7 CL 1 406 10 CL CL A . K 7 CL 1 407 11 CL CL A . L 7 CL 1 408 12 CL CL A . M 8 PPV 1 409 2 PPV PPV A . N 9 DCP 1 410 1 DCP DCP A . O 9 DCP 1 101 2 DCP DCP D . P 6 NA 1 102 6 NA NA D . Q 5 MG 1 101 5 MG MG P . R 10 HOH 1 501 1 HOH HOH A . R 10 HOH 2 502 2 HOH HOH A . R 10 HOH 3 503 3 HOH HOH A . R 10 HOH 4 504 4 HOH HOH A . R 10 HOH 5 505 5 HOH HOH A . R 10 HOH 6 506 6 HOH HOH A . R 10 HOH 7 507 7 HOH HOH A . R 10 HOH 8 508 8 HOH HOH A . R 10 HOH 9 509 9 HOH HOH A . R 10 HOH 10 510 11 HOH HOH A . R 10 HOH 11 511 12 HOH HOH A . R 10 HOH 12 512 13 HOH HOH A . R 10 HOH 13 513 14 HOH HOH A . R 10 HOH 14 514 15 HOH HOH A . R 10 HOH 15 515 16 HOH HOH A . R 10 HOH 16 516 17 HOH HOH A . R 10 HOH 17 517 18 HOH HOH A . R 10 HOH 18 518 19 HOH HOH A . R 10 HOH 19 519 21 HOH HOH A . R 10 HOH 20 520 22 HOH HOH A . R 10 HOH 21 521 23 HOH HOH A . R 10 HOH 22 522 24 HOH HOH A . R 10 HOH 23 523 25 HOH HOH A . R 10 HOH 24 524 26 HOH HOH A . R 10 HOH 25 525 27 HOH HOH A . R 10 HOH 26 526 28 HOH HOH A . R 10 HOH 27 527 29 HOH HOH A . R 10 HOH 28 528 30 HOH HOH A . R 10 HOH 29 529 31 HOH HOH A . R 10 HOH 30 530 32 HOH HOH A . R 10 HOH 31 531 33 HOH HOH A . R 10 HOH 32 532 34 HOH HOH A . R 10 HOH 33 533 35 HOH HOH A . R 10 HOH 34 534 37 HOH HOH A . R 10 HOH 35 535 43 HOH HOH A . R 10 HOH 36 536 47 HOH HOH A . R 10 HOH 37 537 48 HOH HOH A . R 10 HOH 38 538 49 HOH HOH A . R 10 HOH 39 539 50 HOH HOH A . R 10 HOH 40 540 51 HOH HOH A . R 10 HOH 41 541 52 HOH HOH A . R 10 HOH 42 542 53 HOH HOH A . R 10 HOH 43 543 54 HOH HOH A . R 10 HOH 44 544 55 HOH HOH A . R 10 HOH 45 545 56 HOH HOH A . R 10 HOH 46 546 57 HOH HOH A . R 10 HOH 47 547 58 HOH HOH A . R 10 HOH 48 548 59 HOH HOH A . R 10 HOH 49 549 60 HOH HOH A . R 10 HOH 50 550 61 HOH HOH A . R 10 HOH 51 551 62 HOH HOH A . R 10 HOH 52 552 63 HOH HOH A . R 10 HOH 53 553 64 HOH HOH A . R 10 HOH 54 554 65 HOH HOH A . R 10 HOH 55 555 66 HOH HOH A . R 10 HOH 56 556 67 HOH HOH A . R 10 HOH 57 557 68 HOH HOH A . R 10 HOH 58 558 69 HOH HOH A . R 10 HOH 59 559 70 HOH HOH A . R 10 HOH 60 560 71 HOH HOH A . R 10 HOH 61 561 72 HOH HOH A . R 10 HOH 62 562 73 HOH HOH A . R 10 HOH 63 563 74 HOH HOH A . R 10 HOH 64 564 75 HOH HOH A . R 10 HOH 65 565 76 HOH HOH A . R 10 HOH 66 566 77 HOH HOH A . R 10 HOH 67 567 78 HOH HOH A . R 10 HOH 68 568 79 HOH HOH A . R 10 HOH 69 569 80 HOH HOH A . R 10 HOH 70 570 81 HOH HOH A . R 10 HOH 71 571 82 HOH HOH A . R 10 HOH 72 572 83 HOH HOH A . R 10 HOH 73 573 85 HOH HOH A . R 10 HOH 74 574 86 HOH HOH A . R 10 HOH 75 575 87 HOH HOH A . R 10 HOH 76 576 88 HOH HOH A . R 10 HOH 77 577 89 HOH HOH A . R 10 HOH 78 578 90 HOH HOH A . R 10 HOH 79 579 91 HOH HOH A . R 10 HOH 80 580 92 HOH HOH A . R 10 HOH 81 581 94 HOH HOH A . R 10 HOH 82 582 95 HOH HOH A . R 10 HOH 83 583 96 HOH HOH A . R 10 HOH 84 584 98 HOH HOH A . R 10 HOH 85 585 99 HOH HOH A . R 10 HOH 86 586 100 HOH HOH A . R 10 HOH 87 587 105 HOH HOH A . R 10 HOH 88 588 108 HOH HOH A . R 10 HOH 89 589 109 HOH HOH A . R 10 HOH 90 590 111 HOH HOH A . R 10 HOH 91 591 114 HOH HOH A . R 10 HOH 92 592 115 HOH HOH A . R 10 HOH 93 593 116 HOH HOH A . R 10 HOH 94 594 117 HOH HOH A . R 10 HOH 95 595 119 HOH HOH A . R 10 HOH 96 596 122 HOH HOH A . R 10 HOH 97 597 123 HOH HOH A . R 10 HOH 98 598 124 HOH HOH A . R 10 HOH 99 599 126 HOH HOH A . R 10 HOH 100 600 127 HOH HOH A . R 10 HOH 101 601 131 HOH HOH A . R 10 HOH 102 602 133 HOH HOH A . R 10 HOH 103 603 134 HOH HOH A . R 10 HOH 104 604 135 HOH HOH A . R 10 HOH 105 605 136 HOH HOH A . R 10 HOH 106 606 137 HOH HOH A . R 10 HOH 107 607 138 HOH HOH A . R 10 HOH 108 608 139 HOH HOH A . R 10 HOH 109 609 140 HOH HOH A . R 10 HOH 110 610 141 HOH HOH A . R 10 HOH 111 611 145 HOH HOH A . R 10 HOH 112 612 146 HOH HOH A . R 10 HOH 113 613 150 HOH HOH A . R 10 HOH 114 614 151 HOH HOH A . R 10 HOH 115 615 152 HOH HOH A . R 10 HOH 116 616 156 HOH HOH A . R 10 HOH 117 617 157 HOH HOH A . R 10 HOH 118 618 158 HOH HOH A . R 10 HOH 119 619 148 HOH HOH A . R 10 HOH 120 620 149 HOH HOH A . R 10 HOH 121 621 153 HOH HOH A . S 10 HOH 1 201 41 HOH HOH D . S 10 HOH 2 202 104 HOH HOH D . S 10 HOH 3 203 107 HOH HOH D . S 10 HOH 4 204 110 HOH HOH D . S 10 HOH 5 205 120 HOH HOH D . S 10 HOH 6 206 128 HOH HOH D . S 10 HOH 7 207 132 HOH HOH D . S 10 HOH 8 208 142 HOH HOH D . S 10 HOH 9 209 143 HOH HOH D . S 10 HOH 10 210 154 HOH HOH D . S 10 HOH 11 211 106 HOH HOH D . T 10 HOH 1 201 44 HOH HOH P . T 10 HOH 2 202 45 HOH HOH P . T 10 HOH 3 203 46 HOH HOH P . T 10 HOH 4 204 103 HOH HOH P . T 10 HOH 5 205 113 HOH HOH P . T 10 HOH 6 206 118 HOH HOH P . T 10 HOH 7 207 129 HOH HOH P . T 10 HOH 8 208 130 HOH HOH P . T 10 HOH 9 209 144 HOH HOH P . T 10 HOH 10 210 147 HOH HOH P . U 10 HOH 1 101 10 HOH HOH T . U 10 HOH 2 102 20 HOH HOH T . U 10 HOH 3 103 36 HOH HOH T . U 10 HOH 4 104 38 HOH HOH T . U 10 HOH 5 105 39 HOH HOH T . U 10 HOH 6 106 40 HOH HOH T . U 10 HOH 7 107 42 HOH HOH T . U 10 HOH 8 108 84 HOH HOH T . U 10 HOH 9 109 93 HOH HOH T . U 10 HOH 10 110 97 HOH HOH T . U 10 HOH 11 111 101 HOH HOH T . U 10 HOH 12 112 102 HOH HOH T . U 10 HOH 13 113 112 HOH HOH T . U 10 HOH 14 114 121 HOH HOH T . U 10 HOH 15 115 125 HOH HOH T . U 10 HOH 16 116 155 HOH HOH T . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 REFMAC refinement 5.8.0073 ? 2 MOSFLM 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 4RPZ _cell.length_a 49.410 _cell.length_b 79.320 _cell.length_c 55.410 _cell.angle_alpha 90.00 _cell.angle_beta 106.20 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RPZ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # _exptl.entry_id 4RPZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_percent_sol 42.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '50 MM IMIDAZOLE, 350 MM SODIUM Acetate, 17% PEG3350, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 193 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.pdbx_collection_date 2014-07-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 # _reflns.entry_id 4RPZ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 44.19 _reflns.d_resolution_high 2.19 _reflns.number_obs 20173 _reflns.percent_possible_obs 97.6 _reflns.pdbx_Rmerge_I_obs 0.122 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.number_all ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.19 _reflns_shell.d_res_low 2.26 _reflns_shell.percent_possible_all 96.6 _reflns_shell.Rmerge_I_obs 0.548 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 3.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 5585 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4RPZ _refine.ls_number_reflns_obs 19738 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.19 _refine.ls_d_res_high 2.19 _refine.ls_percent_reflns_obs 97.57 _refine.ls_R_factor_obs 0.19813 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19545 _refine.ls_R_factor_R_free 0.25140 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 974 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.896 _refine.B_iso_mean 27.937 _refine.aniso_B[1][1] 0.12 _refine.aniso_B[2][2] 0.09 _refine.aniso_B[3][3] -0.18 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.01 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.348 _refine.pdbx_overall_ESU_R_Free 0.239 _refine.overall_SU_ML 0.203 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.412 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2613 _refine_hist.pdbx_number_atoms_nucleic_acid 652 _refine_hist.pdbx_number_atoms_ligand 75 _refine_hist.number_atoms_solvent 158 _refine_hist.number_atoms_total 3498 _refine_hist.d_res_high 2.19 _refine_hist.d_res_low 44.19 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.018 ? 3534 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 3008 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.303 1.817 ? 4859 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.848 3.000 ? 6973 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.862 5.000 ? 329 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.887 24.127 ? 126 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 14.516 15.000 ? 516 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13.801 15.000 ? 19 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.064 0.200 ? 498 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 3413 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 788 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.360 2.697 ? 1307 ? 'X-RAY DIFFRACTION' r_mcbond_other 1.360 2.696 ? 1306 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.392 4.041 ? 1633 ? 'X-RAY DIFFRACTION' r_mcangle_other 2.391 4.043 ? 1634 ? 'X-RAY DIFFRACTION' r_scbond_it 1.360 2.887 ? 2227 ? 'X-RAY DIFFRACTION' r_scbond_other 1.359 2.887 ? 2226 ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other 2.247 4.304 ? 3224 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 4.025 23.369 ? 4297 ? 'X-RAY DIFFRACTION' r_long_range_B_other 3.974 23.358 ? 4267 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.190 _refine_ls_shell.d_res_low 2.247 _refine_ls_shell.number_reflns_R_work 1441 _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.percent_reflns_obs 96.56 _refine_ls_shell.R_factor_R_free 0.300 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4RPZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4RPZ _struct.title 'Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG)and dCTP soaked with MgCl2 for 60 s' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RPZ _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'X-family, pol beta, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? M N N 8 ? N N N 9 ? O N N 9 ? P N N 6 ? Q N N 5 ? R N N 10 ? S N N 10 ? T N N 10 ? U N N 10 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 4RPZ 4RPZ 2 ? ? ? 3 PDB 4RPZ 4RPZ 3 ? ? ? 4 PDB 4RPZ 4RPZ 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RPZ A 3 ? 337 ? P06746 1 ? 335 ? 1 335 2 2 4RPZ D 1 ? 5 ? 4RPZ 1 ? 5 ? 1 5 3 3 4RPZ P 1 ? 11 ? 4RPZ 1 ? 11 ? 1 11 4 4 4RPZ T 1 ? 16 ? 4RPZ 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RPZ MET A 1 ? UNP P06746 ? ? 'expression tag' -1 1 1 4RPZ GLY A 2 ? UNP P06746 ? ? 'expression tag' 0 2 1 4RPZ HIS A 338 ? UNP P06746 ? ? 'expression tag' 336 3 1 4RPZ HIS A 339 ? UNP P06746 ? ? 'expression tag' 337 4 1 4RPZ HIS A 340 ? UNP P06746 ? ? 'expression tag' 338 5 1 4RPZ HIS A 341 ? UNP P06746 ? ? 'expression tag' 339 6 1 4RPZ HIS A 342 ? UNP P06746 ? ? 'expression tag' 340 7 1 4RPZ HIS A 343 ? UNP P06746 ? ? 'expression tag' 341 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7910 ? 1 MORE -145 ? 1 'SSA (A^2)' 20050 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? VAL A 31 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 34 ? TYR A 51 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 SER A 57 ? LYS A 63 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 68 ? GLY A 82 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 84 ? ASP A 93 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP A 93 ? THR A 103 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY A 109 ? GLU A 119 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 123 ? ASN A 130 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU A 131 ? LEU A 134 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN A 135 ? TYR A 144 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 144 ? GLU A 149 ? TYR A 142 GLU A 147 1 ? 6 HELX_P HELX_P12 12 ARG A 154 ? ASP A 172 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 CYS A 180 ? ARG A 185 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 LYS A 211 ? VAL A 223 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO A 263 ? ASP A 265 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 266 ? GLY A 276 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 277 ? LYS A 291 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 18 SER A 317 ? ILE A 325 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU A 331 ? SER A 336 ? GLU A 329 SER A 334 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D DC 5 "O3'" ? ? ? 1_555 D 8OG 6 P ? ? T DC 5 T 8OG 6 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale2 covale both ? D 8OG 6 "O3'" ? ? ? 1_555 D DG 7 P ? ? T 8OG 6 T DG 7 1_555 ? ? ? ? ? ? ? 1.597 ? ? metalc1 metalc ? ? A LYS 62 O ? ? ? 1_555 G NA . NA ? ? A LYS 60 A NA 403 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc2 metalc ? ? A LEU 64 O ? ? ? 1_555 G NA . NA ? ? A LEU 62 A NA 403 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc3 metalc ? ? A VAL 67 O ? ? ? 1_555 G NA . NA ? ? A VAL 65 A NA 403 1_555 ? ? ? ? ? ? ? 2.241 ? ? metalc4 metalc ? ? A THR 103 O ? ? ? 1_555 H NA . NA ? ? A THR 101 A NA 404 1_555 ? ? ? ? ? ? ? 2.224 ? ? metalc5 metalc ? ? A VAL 105 O ? ? ? 1_555 H NA . NA ? ? A VAL 103 A NA 404 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc6 metalc ? ? A ILE 108 O ? ? ? 1_555 H NA . NA ? ? A ILE 106 A NA 404 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc7 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 401 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc8 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 401 1_555 ? ? ? ? ? ? ? 2.978 ? ? metalc9 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 190 A MG 402 1_555 ? ? ? ? ? ? ? 2.146 ? ? metalc10 metalc ? ? A ASP 194 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 192 A MG 401 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc11 metalc ? ? A ASP 194 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 192 A MG 402 1_555 ? ? ? ? ? ? ? 2.232 ? ? metalc12 metalc ? ? A ASP 258 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 256 A MG 401 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc13 metalc ? ? A ASP 320 OD1 ? ? ? 1_555 I NA . NA ? ? A ASP 318 A NA 405 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc14 metalc ? ? A ASP 323 OD2 ? ? ? 1_555 I NA . NA ? ? A ASP 321 A NA 405 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc15 metalc ? ? E MG . MG ? ? ? 1_555 N DCP . O2A B ? A MG 401 A DCP 410 1_555 ? ? ? ? ? ? ? 2.182 ? ? metalc16 metalc ? ? E MG . MG ? ? ? 1_555 C DC 10 "O3'" B ? A MG 401 P DC 10 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 C DC 10 "O3'" A ? A MG 401 P DC 10 1_555 ? ? ? ? ? ? ? 2.190 ? ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 C DC 11 OP1 A ? A MG 401 P DC 11 1_555 ? ? ? ? ? ? ? 2.195 ? ? metalc19 metalc ? ? F MG . MG ? ? ? 1_555 M PPV . O11 A ? A MG 402 A PPV 409 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc20 metalc ? ? F MG . MG ? ? ? 1_555 M PPV . O22 A ? A MG 402 A PPV 409 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc21 metalc ? ? F MG . MG ? ? ? 1_555 N DCP . O1B B ? A MG 402 A DCP 410 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc22 metalc ? ? F MG . MG ? ? ? 1_555 N DCP . O2A B ? A MG 402 A DCP 410 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc23 metalc ? ? F MG . MG ? ? ? 1_555 N DCP . O3G B ? A MG 402 A DCP 410 1_555 ? ? ? ? ? ? ? 2.183 ? ? metalc24 metalc ? ? F MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 402 A HOH 610 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc25 metalc ? ? F MG . MG ? ? ? 1_555 C DC 11 OP1 A ? A MG 402 P DC 11 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc26 metalc ? ? G NA . NA ? ? ? 1_555 R HOH . O ? ? A NA 403 A HOH 589 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc27 metalc ? ? G NA . NA ? ? ? 1_555 B DC 3 OP1 ? ? A NA 403 D DC 3 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc28 metalc ? ? G NA . NA ? ? ? 1_555 S HOH . O ? ? A NA 403 D HOH 202 1_555 ? ? ? ? ? ? ? 2.247 ? ? metalc29 metalc ? ? H NA . NA ? ? ? 1_555 R HOH . O ? ? A NA 404 A HOH 517 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc30 metalc ? ? H NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 404 P DG 9 1_555 ? ? ? ? ? ? ? 2.237 ? ? metalc31 metalc ? ? H NA . NA ? ? ? 1_555 T HOH . O ? ? A NA 404 P HOH 208 1_555 ? ? ? ? ? ? ? 2.245 ? ? metalc32 metalc ? ? I NA . NA ? ? ? 1_555 R HOH . O ? ? A NA 405 A HOH 593 1_555 ? ? ? ? ? ? ? 2.240 ? ? metalc33 metalc ? ? M PPV . O31 A ? ? 1_555 Q MG . MG ? ? A PPV 409 P MG 101 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc34 metalc ? ? N DCP . O1A B ? ? 1_555 Q MG . MG ? ? A DCP 410 P MG 101 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc35 metalc ? ? N DCP . O3A B ? ? 1_555 Q MG . MG ? ? A DCP 410 P MG 101 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc36 metalc ? ? R HOH . O ? ? ? 1_555 Q MG . MG ? ? A HOH 613 P MG 101 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc37 metalc ? ? R HOH . O ? ? ? 1_555 Q MG . MG ? ? A HOH 619 P MG 101 1_555 ? ? ? ? ? ? ? 2.182 ? ? metalc38 metalc ? ? R HOH . O ? ? ? 1_555 Q MG . MG ? ? A HOH 621 P MG 101 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc39 metalc ? ? O DCP . O1B ? ? ? 1_555 P NA . NA ? ? D DCP 101 D NA 102 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc40 metalc ? ? O DCP . O2G ? ? ? 1_555 P NA . NA ? ? D DCP 101 D NA 102 1_555 ? ? ? ? ? ? ? 2.226 ? ? metalc41 metalc ? ? P NA . NA ? ? ? 1_555 S HOH . O ? ? D NA 102 D HOH 208 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc42 metalc ? ? P NA . NA ? ? ? 1_555 S HOH . O ? ? D NA 102 D HOH 209 1_555 ? ? ? ? ? ? ? 2.232 ? ? metalc43 metalc ? ? P NA . NA ? ? ? 1_555 S HOH . O ? ? D NA 102 D HOH 210 1_555 ? ? ? ? ? ? ? 2.974 ? ? metalc44 metalc ? ? C DC 11 OP2 A ? ? 1_555 Q MG . MG ? ? P DC 11 P MG 101 1_555 ? ? ? ? ? ? ? 2.182 ? ? metalc45 metalc ? ? Q MG . MG ? ? ? 1_555 T HOH . O ? ? P MG 101 P HOH 210 1_555 ? ? ? ? ? ? ? 2.176 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 16 N3 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 16 O2 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 15 N1 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 15 O6 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 15 N2 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 13 N3 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 13 O2 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 13 N4 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 10 N3 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 10 O2 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 10 N4 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 10 N3 A ? ? 1_555 D DG 7 N1 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 10 N4 A ? ? 1_555 D DG 7 O6 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 10 O2 A ? ? 1_555 D DG 7 N2 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 11 N3 A ? ? 1_555 D 8OG 6 N1 ? ? P DC 11 T 8OG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 11 N4 A ? ? 1_555 D 8OG 6 O6 ? ? P DC 11 T 8OG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 11 O2 A ? ? 1_555 D 8OG 6 N2 ? ? P DC 11 T 8OG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A LEU 64 ? A LEU 62 ? 1_555 93.1 ? 2 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 86.6 ? 3 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 106.2 ? 4 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? R HOH . ? A HOH 589 ? 1_555 96.0 ? 5 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? R HOH . ? A HOH 589 ? 1_555 69.7 ? 6 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? R HOH . ? A HOH 589 ? 1_555 175.1 ? 7 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 164.3 ? 8 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 102.6 ? 9 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 88.1 ? 10 O ? R HOH . ? A HOH 589 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 90.3 ? 11 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? S HOH . ? D HOH 202 ? 1_555 86.9 ? 12 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? S HOH . ? D HOH 202 ? 1_555 163.9 ? 13 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? S HOH . ? D HOH 202 ? 1_555 89.9 ? 14 O ? R HOH . ? A HOH 589 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? S HOH . ? D HOH 202 ? 1_555 94.3 ? 15 OP1 ? B DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? S HOH . ? D HOH 202 ? 1_555 78.3 ? 16 O ? A THR 103 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 105 ? A VAL 103 ? 1_555 94.8 ? 17 O ? A THR 103 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 88.6 ? 18 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 93.0 ? 19 O ? A THR 103 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? R HOH . ? A HOH 517 ? 1_555 83.0 ? 20 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? R HOH . ? A HOH 517 ? 1_555 86.3 ? 21 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? R HOH . ? A HOH 517 ? 1_555 171.5 ? 22 O ? A THR 103 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 162.5 ? 23 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 100.2 ? 24 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 99.7 ? 25 O ? R HOH . ? A HOH 517 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 88.8 ? 26 O ? A THR 103 ? A THR 101 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? T HOH . ? P HOH 208 ? 1_555 75.4 ? 27 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? T HOH . ? P HOH 208 ? 1_555 161.1 ? 28 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? T HOH . ? P HOH 208 ? 1_555 71.0 ? 29 O ? R HOH . ? A HOH 517 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? T HOH . ? P HOH 208 ? 1_555 108.0 ? 30 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? T HOH . ? P HOH 208 ? 1_555 92.6 ? 31 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 46.4 ? 32 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 102.2 ? 33 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 82.5 ? 34 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 80.0 ? 35 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 122.6 ? 36 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 92.3 ? 37 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 109.8 ? 38 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 68.4 ? 39 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 90.6 ? 40 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 168.9 ? 41 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" B C DC 10 ? P DC 10 ? 1_555 159.3 ? 42 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" B C DC 10 ? P DC 10 ? 1_555 154.1 ? 43 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" B C DC 10 ? P DC 10 ? 1_555 88.3 ? 44 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" B C DC 10 ? P DC 10 ? 1_555 81.8 ? 45 O2A B N DCP . ? A DCP 410 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" B C DC 10 ? P DC 10 ? 1_555 87.7 ? 46 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" A C DC 10 ? P DC 10 ? 1_555 146.8 ? 47 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" A C DC 10 ? P DC 10 ? 1_555 135.5 ? 48 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" A C DC 10 ? P DC 10 ? 1_555 110.9 ? 49 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" A C DC 10 ? P DC 10 ? 1_555 99.8 ? 50 O2A B N DCP . ? A DCP 410 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" A C DC 10 ? P DC 10 ? 1_555 69.2 ? 51 "O3'" B C DC 10 ? P DC 10 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 "O3'" A C DC 10 ? P DC 10 ? 1_555 29.7 ? 52 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 108.5 ? 53 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 67.8 ? 54 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 92.4 ? 55 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 169.1 ? 56 O2A B N DCP . ? A DCP 410 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 2.0 ? 57 "O3'" B C DC 10 ? P DC 10 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 88.6 ? 58 "O3'" A C DC 10 ? P DC 10 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 69.4 ? 59 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 91.0 ? 60 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O11 A M PPV . ? A PPV 409 ? 1_555 171.9 ? 61 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O11 A M PPV . ? A PPV 409 ? 1_555 93.8 ? 62 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O22 A M PPV . ? A PPV 409 ? 1_555 96.5 ? 63 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O22 A M PPV . ? A PPV 409 ? 1_555 171.3 ? 64 O11 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O22 A M PPV . ? A PPV 409 ? 1_555 78.3 ? 65 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O1B B N DCP . ? A DCP 410 ? 1_555 172.5 ? 66 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O1B B N DCP . ? A DCP 410 ? 1_555 81.8 ? 67 O11 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O1B B N DCP . ? A DCP 410 ? 1_555 14.8 ? 68 O22 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O1B B N DCP . ? A DCP 410 ? 1_555 90.8 ? 69 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 86.9 ? 70 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 78.4 ? 71 O11 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 100.4 ? 72 O22 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 106.3 ? 73 O1B B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O2A B N DCP . ? A DCP 410 ? 1_555 89.4 ? 74 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O3G B N DCP . ? A DCP 410 ? 1_555 98.3 ? 75 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O3G B N DCP . ? A DCP 410 ? 1_555 169.5 ? 76 O11 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O3G B N DCP . ? A DCP 410 ? 1_555 77.6 ? 77 O22 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O3G B N DCP . ? A DCP 410 ? 1_555 9.4 ? 78 O1B B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O3G B N DCP . ? A DCP 410 ? 1_555 88.7 ? 79 O2A B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O3G B N DCP . ? A DCP 410 ? 1_555 97.1 ? 80 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? R HOH . ? A HOH 610 ? 1_555 97.1 ? 81 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? R HOH . ? A HOH 610 ? 1_555 90.8 ? 82 O11 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? R HOH . ? A HOH 610 ? 1_555 76.4 ? 83 O22 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? R HOH . ? A HOH 610 ? 1_555 83.9 ? 84 O1B B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? R HOH . ? A HOH 610 ? 1_555 85.3 ? 85 O2A B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? R HOH . ? A HOH 610 ? 1_555 168.6 ? 86 O3G B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? R HOH . ? A HOH 610 ? 1_555 92.9 ? 87 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 86.4 ? 88 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 80.4 ? 89 O11 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 100.8 ? 90 O22 A M PPV . ? A PPV 409 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 104.4 ? 91 O1B B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 90.2 ? 92 O2A B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 2.1 ? 93 O3G B N DCP . ? A DCP 410 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 95.2 ? 94 O ? R HOH . ? A HOH 610 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 A C DC 11 ? P DC 11 ? 1_555 170.6 ? 95 OD1 ? A ASP 320 ? A ASP 318 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OD2 ? A ASP 323 ? A ASP 321 ? 1_555 112.0 ? 96 OD1 ? A ASP 320 ? A ASP 318 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? R HOH . ? A HOH 593 ? 1_555 60.7 ? 97 OD2 ? A ASP 323 ? A ASP 321 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? R HOH . ? A HOH 593 ? 1_555 100.4 ? 98 O31 A M PPV . ? A PPV 409 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O1A B N DCP . ? A DCP 410 ? 1_555 79.3 ? 99 O31 A M PPV . ? A PPV 409 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O3A B N DCP . ? A DCP 410 ? 1_555 8.7 ? 100 O1A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O3A B N DCP . ? A DCP 410 ? 1_555 72.2 ? 101 O31 A M PPV . ? A PPV 409 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 613 ? 1_555 114.0 ? 102 O1A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 613 ? 1_555 145.8 ? 103 O3A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 613 ? 1_555 117.0 ? 104 O31 A M PPV . ? A PPV 409 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 619 ? 1_555 85.7 ? 105 O1A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 619 ? 1_555 76.2 ? 106 O3A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 619 ? 1_555 79.3 ? 107 O ? R HOH . ? A HOH 613 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 619 ? 1_555 73.7 ? 108 O31 A M PPV . ? A PPV 409 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 621 ? 1_555 152.7 ? 109 O1A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 621 ? 1_555 85.8 ? 110 O3A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 621 ? 1_555 144.5 ? 111 O ? R HOH . ? A HOH 613 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 621 ? 1_555 68.3 ? 112 O ? R HOH . ? A HOH 619 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? R HOH . ? A HOH 621 ? 1_555 68.4 ? 113 O31 A M PPV . ? A PPV 409 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 OP2 A C DC 11 ? P DC 11 ? 1_555 79.2 ? 114 O1A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 OP2 A C DC 11 ? P DC 11 ? 1_555 2.3 ? 115 O3A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 OP2 A C DC 11 ? P DC 11 ? 1_555 72.3 ? 116 O ? R HOH . ? A HOH 613 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 OP2 A C DC 11 ? P DC 11 ? 1_555 147.9 ? 117 O ? R HOH . ? A HOH 619 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 OP2 A C DC 11 ? P DC 11 ? 1_555 78.5 ? 118 O ? R HOH . ? A HOH 621 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 OP2 A C DC 11 ? P DC 11 ? 1_555 86.8 ? 119 O31 A M PPV . ? A PPV 409 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? T HOH . ? P HOH 210 ? 1_555 95.2 ? 120 O1A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? T HOH . ? P HOH 210 ? 1_555 91.0 ? 121 O3A B N DCP . ? A DCP 410 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? T HOH . ? P HOH 210 ? 1_555 100.1 ? 122 O ? R HOH . ? A HOH 613 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? T HOH . ? P HOH 210 ? 1_555 117.4 ? 123 O ? R HOH . ? A HOH 619 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? T HOH . ? P HOH 210 ? 1_555 166.8 ? 124 O ? R HOH . ? A HOH 621 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? T HOH . ? P HOH 210 ? 1_555 107.9 ? 125 OP2 A C DC 11 ? P DC 11 ? 1_555 MG ? Q MG . ? P MG 101 ? 1_555 O ? T HOH . ? P HOH 210 ? 1_555 88.8 ? 126 O1B ? O DCP . ? D DCP 101 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O2G ? O DCP . ? D DCP 101 ? 1_555 88.5 ? 127 O1B ? O DCP . ? D DCP 101 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 208 ? 1_555 83.6 ? 128 O2G ? O DCP . ? D DCP 101 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 208 ? 1_555 63.9 ? 129 O1B ? O DCP . ? D DCP 101 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 209 ? 1_555 101.6 ? 130 O2G ? O DCP . ? D DCP 101 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 209 ? 1_555 137.1 ? 131 O ? S HOH . ? D HOH 208 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 209 ? 1_555 157.8 ? 132 O1B ? O DCP . ? D DCP 101 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 210 ? 1_555 144.1 ? 133 O2G ? O DCP . ? D DCP 101 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 210 ? 1_555 75.9 ? 134 O ? S HOH . ? D HOH 208 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 210 ? 1_555 60.5 ? 135 O ? S HOH . ? D HOH 209 ? 1_555 NA ? P NA . ? D NA 102 ? 1_555 O ? S HOH . ? D HOH 210 ? 1_555 112.0 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 276 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 277 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.00 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 152 ? PRO A 153 ? ILE A 150 PRO A 151 A 2 SER A 189 ? SER A 190 ? SER A 187 SER A 188 B 1 ILE A 176 ? VAL A 179 ? ILE A 174 VAL A 177 B 2 MET A 193 ? THR A 198 ? MET A 191 THR A 196 B 3 ARG A 255 ? LEU A 261 ? ARG A 253 LEU A 259 B 4 LYS A 236 ? CYS A 241 ? LYS A 234 CYS A 239 B 5 ILE A 226 ? LYS A 232 ? ILE A 224 LYS A 230 C 1 PHE A 202 ? THR A 203 ? PHE A 200 THR A 201 C 2 SER A 206 ? THR A 207 ? SER A 204 THR A 205 D 1 PHE A 293 ? ILE A 295 ? PHE A 291 ILE A 293 D 2 ILE A 300 ? PRO A 302 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 152 ? N ILE A 150 O SER A 190 ? O SER A 188 B 1 2 N THR A 178 ? N THR A 176 O LEU A 196 ? O LEU A 194 B 2 3 N VAL A 195 ? N VAL A 193 O ASP A 258 ? O ASP A 256 B 3 4 O ARG A 255 ? O ARG A 253 N CYS A 241 ? N CYS A 239 B 4 5 O MET A 238 ? O MET A 236 N SER A 231 ? N SER A 229 C 1 2 N THR A 203 ? N THR A 201 O SER A 206 ? O SER A 204 D 1 2 N THR A 294 ? N THR A 292 O ARG A 301 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 7 'BINDING SITE FOR RESIDUE MG A 401' AC2 Software A MG 402 ? 7 'BINDING SITE FOR RESIDUE MG A 402' AC3 Software A NA 403 ? 6 'BINDING SITE FOR RESIDUE NA A 403' AC4 Software A NA 404 ? 6 'BINDING SITE FOR RESIDUE NA A 404' AC5 Software A NA 405 ? 4 'BINDING SITE FOR RESIDUE NA A 405' AC6 Software A CL 406 ? 4 'BINDING SITE FOR RESIDUE CL A 406' AC7 Software A CL 407 ? 4 'BINDING SITE FOR RESIDUE CL A 407' AC8 Software A CL 408 ? 3 'BINDING SITE FOR RESIDUE CL A 408' AC9 Software A PPV 409 ? 14 'BINDING SITE FOR RESIDUE PPV A 409' BC1 Software A DCP 410 ? 25 'BINDING SITE FOR RESIDUE DCP A 410' BC2 Software D DCP 101 ? 16 'BINDING SITE FOR RESIDUE DCP D 101' BC3 Software D NA 102 ? 6 'BINDING SITE FOR RESIDUE NA D 102' BC4 Software P MG 101 ? 7 'BINDING SITE FOR RESIDUE MG P 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 192 ? ASP A 190 . ? 1_555 ? 2 AC1 7 ASP A 194 ? ASP A 192 . ? 1_555 ? 3 AC1 7 ASP A 258 ? ASP A 256 . ? 1_555 ? 4 AC1 7 MG F . ? MG A 402 . ? 1_555 ? 5 AC1 7 DCP N . ? DCP A 410 . ? 1_555 ? 6 AC1 7 DC C 10 ? DC P 10 . ? 1_555 ? 7 AC1 7 DC C 11 ? DC P 11 . ? 1_555 ? 8 AC2 7 ASP A 192 ? ASP A 190 . ? 1_555 ? 9 AC2 7 ASP A 194 ? ASP A 192 . ? 1_555 ? 10 AC2 7 MG E . ? MG A 401 . ? 1_555 ? 11 AC2 7 PPV M . ? PPV A 409 . ? 1_555 ? 12 AC2 7 DCP N . ? DCP A 410 . ? 1_555 ? 13 AC2 7 HOH R . ? HOH A 610 . ? 1_555 ? 14 AC2 7 DC C 11 ? DC P 11 . ? 1_555 ? 15 AC3 6 LYS A 62 ? LYS A 60 . ? 1_555 ? 16 AC3 6 LEU A 64 ? LEU A 62 . ? 1_555 ? 17 AC3 6 VAL A 67 ? VAL A 65 . ? 1_555 ? 18 AC3 6 HOH R . ? HOH A 589 . ? 1_555 ? 19 AC3 6 DC B 3 ? DC D 3 . ? 1_555 ? 20 AC3 6 HOH S . ? HOH D 202 . ? 1_555 ? 21 AC4 6 THR A 103 ? THR A 101 . ? 1_555 ? 22 AC4 6 VAL A 105 ? VAL A 103 . ? 1_555 ? 23 AC4 6 ILE A 108 ? ILE A 106 . ? 1_555 ? 24 AC4 6 HOH R . ? HOH A 517 . ? 1_555 ? 25 AC4 6 DG C 9 ? DG P 9 . ? 1_555 ? 26 AC4 6 HOH T . ? HOH P 208 . ? 1_555 ? 27 AC5 4 ASP A 320 ? ASP A 318 . ? 1_555 ? 28 AC5 4 ASP A 323 ? ASP A 321 . ? 1_555 ? 29 AC5 4 HOH R . ? HOH A 593 . ? 1_555 ? 30 AC5 4 DCP O . ? DCP D 101 . ? 1_455 ? 31 AC6 4 GLN A 266 ? GLN A 264 . ? 1_555 ? 32 AC6 4 TYR A 268 ? TYR A 266 . ? 1_555 ? 33 AC6 4 CYS A 269 ? CYS A 267 . ? 1_555 ? 34 AC6 4 HOH R . ? HOH A 561 . ? 1_555 ? 35 AC7 4 ASN A 296 ? ASN A 294 . ? 1_555 ? 36 AC7 4 THR A 299 ? THR A 297 . ? 1_555 ? 37 AC7 4 ARG A 301 ? ARG A 299 . ? 1_555 ? 38 AC7 4 HOH R . ? HOH A 563 . ? 1_555 ? 39 AC8 3 ALA A 34 ? ALA A 32 . ? 1_555 ? 40 AC8 3 HIS A 36 ? HIS A 34 . ? 1_555 ? 41 AC8 3 LYS A 37 ? LYS A 35 . ? 1_555 ? 42 AC9 14 ARG A 151 ? ARG A 149 . ? 1_555 ? 43 AC9 14 GLY A 181 ? GLY A 179 . ? 1_555 ? 44 AC9 14 SER A 182 ? SER A 180 . ? 1_555 ? 45 AC9 14 ARG A 185 ? ARG A 183 . ? 1_555 ? 46 AC9 14 GLY A 191 ? GLY A 189 . ? 1_555 ? 47 AC9 14 ASP A 192 ? ASP A 190 . ? 1_555 ? 48 AC9 14 ASP A 194 ? ASP A 192 . ? 1_555 ? 49 AC9 14 MG F . ? MG A 402 . ? 1_555 ? 50 AC9 14 HOH R . ? HOH A 610 . ? 1_555 ? 51 AC9 14 HOH R . ? HOH A 613 . ? 1_555 ? 52 AC9 14 HOH R . ? HOH A 619 . ? 1_555 ? 53 AC9 14 HOH R . ? HOH A 620 . ? 1_555 ? 54 AC9 14 DC C 11 ? DC P 11 . ? 1_555 ? 55 AC9 14 MG Q . ? MG P 101 . ? 1_555 ? 56 BC1 25 ARG A 151 ? ARG A 149 . ? 1_555 ? 57 BC1 25 GLY A 181 ? GLY A 179 . ? 1_555 ? 58 BC1 25 SER A 182 ? SER A 180 . ? 1_555 ? 59 BC1 25 ARG A 185 ? ARG A 183 . ? 1_555 ? 60 BC1 25 GLY A 191 ? GLY A 189 . ? 1_555 ? 61 BC1 25 ASP A 192 ? ASP A 190 . ? 1_555 ? 62 BC1 25 ASP A 194 ? ASP A 192 . ? 1_555 ? 63 BC1 25 TYR A 273 ? TYR A 271 . ? 1_555 ? 64 BC1 25 PHE A 274 ? PHE A 272 . ? 1_555 ? 65 BC1 25 THR A 275 ? THR A 273 . ? 1_555 ? 66 BC1 25 GLY A 276 ? GLY A 274 . ? 1_555 ? 67 BC1 25 ASP A 278 ? ASP A 276 . ? 1_555 ? 68 BC1 25 ASN A 281 ? ASN A 279 . ? 1_555 ? 69 BC1 25 MG E . ? MG A 401 . ? 1_555 ? 70 BC1 25 MG F . ? MG A 402 . ? 1_555 ? 71 BC1 25 HOH R . ? HOH A 610 . ? 1_555 ? 72 BC1 25 HOH R . ? HOH A 613 . ? 1_555 ? 73 BC1 25 HOH R . ? HOH A 619 . ? 1_555 ? 74 BC1 25 HOH R . ? HOH A 620 . ? 1_555 ? 75 BC1 25 HOH R . ? HOH A 621 . ? 1_555 ? 76 BC1 25 DC C 10 ? DC P 10 . ? 1_555 ? 77 BC1 25 MG Q . ? MG P 101 . ? 1_555 ? 78 BC1 25 HOH T . ? HOH P 209 . ? 1_555 ? 79 BC1 25 HOH T . ? HOH P 210 . ? 1_555 ? 80 BC1 25 8OG D 6 ? 8OG T 6 . ? 1_555 ? 81 BC2 16 ASP A 126 ? ASP A 124 . ? 1_554 ? 82 BC2 16 LYS A 129 ? LYS A 127 . ? 1_554 ? 83 BC2 16 TYR A 268 ? TYR A 266 . ? 1_655 ? 84 BC2 16 ASP A 316 ? ASP A 314 . ? 1_655 ? 85 BC2 16 SER A 317 ? SER A 315 . ? 1_655 ? 86 BC2 16 LYS A 319 ? LYS A 317 . ? 1_655 ? 87 BC2 16 ASP A 320 ? ASP A 318 . ? 1_655 ? 88 BC2 16 ASP A 323 ? ASP A 321 . ? 1_655 ? 89 BC2 16 NA I . ? NA A 405 . ? 1_655 ? 90 BC2 16 HOH R . ? HOH A 585 . ? 1_655 ? 91 BC2 16 HOH R . ? HOH A 593 . ? 1_655 ? 92 BC2 16 DG B 4 ? DG D 4 . ? 1_555 ? 93 BC2 16 DG B 5 ? DG D 5 . ? 1_555 ? 94 BC2 16 NA P . ? NA D 102 . ? 1_555 ? 95 BC2 16 HOH S . ? HOH D 208 . ? 1_555 ? 96 BC2 16 DC D 2 ? DC T 2 . ? 1_555 ? 97 BC3 6 ASP A 126 ? ASP A 124 . ? 1_554 ? 98 BC3 6 LYS A 129 ? LYS A 127 . ? 1_554 ? 99 BC3 6 DCP O . ? DCP D 101 . ? 1_555 ? 100 BC3 6 HOH S . ? HOH D 208 . ? 1_555 ? 101 BC3 6 HOH S . ? HOH D 209 . ? 1_555 ? 102 BC3 6 HOH S . ? HOH D 210 . ? 1_555 ? 103 BC4 7 PPV M . ? PPV A 409 . ? 1_555 ? 104 BC4 7 DCP N . ? DCP A 410 . ? 1_555 ? 105 BC4 7 HOH R . ? HOH A 613 . ? 1_555 ? 106 BC4 7 HOH R . ? HOH A 619 . ? 1_555 ? 107 BC4 7 HOH R . ? HOH A 621 . ? 1_555 ? 108 BC4 7 DC C 11 ? DC P 11 . ? 1_555 ? 109 BC4 7 HOH T . ? HOH P 210 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.480 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.127 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 32 ? ? -115.89 77.83 2 1 CYS A 178 ? ? -113.06 -140.16 3 1 SER A 204 ? ? -173.60 130.08 4 1 ASP A 246 ? ? 48.09 13.28 5 1 THR A 304 ? ? 92.69 0.20 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id D _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id T _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A GLY 0 ? A GLY 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A SER 2 ? A SER 4 5 1 Y 1 A LYS 3 ? A LYS 5 6 1 Y 1 A ARG 4 ? A ARG 6 7 1 Y 1 A LYS 5 ? A LYS 7 8 1 Y 1 A ALA 6 ? A ALA 8 9 1 Y 1 A PRO 7 ? A PRO 9 10 1 Y 1 A GLN 8 ? A GLN 10 11 1 Y 1 A GLU 9 ? A GLU 11 12 1 Y 1 A HIS 336 ? A HIS 338 13 1 Y 1 A HIS 337 ? A HIS 339 14 1 Y 1 A HIS 338 ? A HIS 340 15 1 Y 1 A HIS 339 ? A HIS 341 16 1 Y 1 A HIS 340 ? A HIS 342 17 1 Y 1 A HIS 341 ? A HIS 343 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CL CL CL N N 112 CYS N N N N 113 CYS CA C N R 114 CYS C C N N 115 CYS O O N N 116 CYS CB C N N 117 CYS SG S N N 118 CYS OXT O N N 119 CYS H H N N 120 CYS H2 H N N 121 CYS HA H N N 122 CYS HB2 H N N 123 CYS HB3 H N N 124 CYS HG H N N 125 CYS HXT H N N 126 DA OP3 O N N 127 DA P P N N 128 DA OP1 O N N 129 DA OP2 O N N 130 DA "O5'" O N N 131 DA "C5'" C N N 132 DA "C4'" C N R 133 DA "O4'" O N N 134 DA "C3'" C N S 135 DA "O3'" O N N 136 DA "C2'" C N N 137 DA "C1'" C N R 138 DA N9 N Y N 139 DA C8 C Y N 140 DA N7 N Y N 141 DA C5 C Y N 142 DA C6 C Y N 143 DA N6 N N N 144 DA N1 N Y N 145 DA C2 C Y N 146 DA N3 N Y N 147 DA C4 C Y N 148 DA HOP3 H N N 149 DA HOP2 H N N 150 DA "H5'" H N N 151 DA "H5''" H N N 152 DA "H4'" H N N 153 DA "H3'" H N N 154 DA "HO3'" H N N 155 DA "H2'" H N N 156 DA "H2''" H N N 157 DA "H1'" H N N 158 DA H8 H N N 159 DA H61 H N N 160 DA H62 H N N 161 DA H2 H N N 162 DC OP3 O N N 163 DC P P N N 164 DC OP1 O N N 165 DC OP2 O N N 166 DC "O5'" O N N 167 DC "C5'" C N N 168 DC "C4'" C N R 169 DC "O4'" O N N 170 DC "C3'" C N S 171 DC "O3'" O N N 172 DC "C2'" C N N 173 DC "C1'" C N R 174 DC N1 N N N 175 DC C2 C N N 176 DC O2 O N N 177 DC N3 N N N 178 DC C4 C N N 179 DC N4 N N N 180 DC C5 C N N 181 DC C6 C N N 182 DC HOP3 H N N 183 DC HOP2 H N N 184 DC "H5'" H N N 185 DC "H5''" H N N 186 DC "H4'" H N N 187 DC "H3'" H N N 188 DC "HO3'" H N N 189 DC "H2'" H N N 190 DC "H2''" H N N 191 DC "H1'" H N N 192 DC H41 H N N 193 DC H42 H N N 194 DC H5 H N N 195 DC H6 H N N 196 DCP N1 N N N 197 DCP C2 C N N 198 DCP N3 N N N 199 DCP C4 C N N 200 DCP C5 C N N 201 DCP C6 C N N 202 DCP O2 O N N 203 DCP N4 N N N 204 DCP "C1'" C N R 205 DCP "C2'" C N N 206 DCP "C3'" C N S 207 DCP "C4'" C N R 208 DCP "O4'" O N N 209 DCP "O3'" O N N 210 DCP "C5'" C N N 211 DCP "O5'" O N N 212 DCP PA P N R 213 DCP O1A O N N 214 DCP O2A O N N 215 DCP O3A O N N 216 DCP PB P N S 217 DCP O1B O N N 218 DCP O2B O N N 219 DCP O3B O N N 220 DCP PG P N N 221 DCP O1G O N N 222 DCP O2G O N N 223 DCP O3G O N N 224 DCP H5 H N N 225 DCP H6 H N N 226 DCP HN41 H N N 227 DCP HN42 H N N 228 DCP "H1'" H N N 229 DCP "H2'1" H N N 230 DCP "H2'2" H N N 231 DCP "H3'" H N N 232 DCP "H4'" H N N 233 DCP "HO3'" H N N 234 DCP "H5'1" H N N 235 DCP "H5'2" H N N 236 DCP HOA2 H N N 237 DCP HOB2 H N N 238 DCP HOG2 H N N 239 DCP HOG3 H N N 240 DG OP3 O N N 241 DG P P N N 242 DG OP1 O N N 243 DG OP2 O N N 244 DG "O5'" O N N 245 DG "C5'" C N N 246 DG "C4'" C N R 247 DG "O4'" O N N 248 DG "C3'" C N S 249 DG "O3'" O N N 250 DG "C2'" C N N 251 DG "C1'" C N R 252 DG N9 N Y N 253 DG C8 C Y N 254 DG N7 N Y N 255 DG C5 C Y N 256 DG C6 C N N 257 DG O6 O N N 258 DG N1 N N N 259 DG C2 C N N 260 DG N2 N N N 261 DG N3 N N N 262 DG C4 C Y N 263 DG HOP3 H N N 264 DG HOP2 H N N 265 DG "H5'" H N N 266 DG "H5''" H N N 267 DG "H4'" H N N 268 DG "H3'" H N N 269 DG "HO3'" H N N 270 DG "H2'" H N N 271 DG "H2''" H N N 272 DG "H1'" H N N 273 DG H8 H N N 274 DG H1 H N N 275 DG H21 H N N 276 DG H22 H N N 277 DT OP3 O N N 278 DT P P N N 279 DT OP1 O N N 280 DT OP2 O N N 281 DT "O5'" O N N 282 DT "C5'" C N N 283 DT "C4'" C N R 284 DT "O4'" O N N 285 DT "C3'" C N S 286 DT "O3'" O N N 287 DT "C2'" C N N 288 DT "C1'" C N R 289 DT N1 N N N 290 DT C2 C N N 291 DT O2 O N N 292 DT N3 N N N 293 DT C4 C N N 294 DT O4 O N N 295 DT C5 C N N 296 DT C7 C N N 297 DT C6 C N N 298 DT HOP3 H N N 299 DT HOP2 H N N 300 DT "H5'" H N N 301 DT "H5''" H N N 302 DT "H4'" H N N 303 DT "H3'" H N N 304 DT "HO3'" H N N 305 DT "H2'" H N N 306 DT "H2''" H N N 307 DT "H1'" H N N 308 DT H3 H N N 309 DT H71 H N N 310 DT H72 H N N 311 DT H73 H N N 312 DT H6 H N N 313 GLN N N N N 314 GLN CA C N S 315 GLN C C N N 316 GLN O O N N 317 GLN CB C N N 318 GLN CG C N N 319 GLN CD C N N 320 GLN OE1 O N N 321 GLN NE2 N N N 322 GLN OXT O N N 323 GLN H H N N 324 GLN H2 H N N 325 GLN HA H N N 326 GLN HB2 H N N 327 GLN HB3 H N N 328 GLN HG2 H N N 329 GLN HG3 H N N 330 GLN HE21 H N N 331 GLN HE22 H N N 332 GLN HXT H N N 333 GLU N N N N 334 GLU CA C N S 335 GLU C C N N 336 GLU O O N N 337 GLU CB C N N 338 GLU CG C N N 339 GLU CD C N N 340 GLU OE1 O N N 341 GLU OE2 O N N 342 GLU OXT O N N 343 GLU H H N N 344 GLU H2 H N N 345 GLU HA H N N 346 GLU HB2 H N N 347 GLU HB3 H N N 348 GLU HG2 H N N 349 GLU HG3 H N N 350 GLU HE2 H N N 351 GLU HXT H N N 352 GLY N N N N 353 GLY CA C N N 354 GLY C C N N 355 GLY O O N N 356 GLY OXT O N N 357 GLY H H N N 358 GLY H2 H N N 359 GLY HA2 H N N 360 GLY HA3 H N N 361 GLY HXT H N N 362 HIS N N N N 363 HIS CA C N S 364 HIS C C N N 365 HIS O O N N 366 HIS CB C N N 367 HIS CG C Y N 368 HIS ND1 N Y N 369 HIS CD2 C Y N 370 HIS CE1 C Y N 371 HIS NE2 N Y N 372 HIS OXT O N N 373 HIS H H N N 374 HIS H2 H N N 375 HIS HA H N N 376 HIS HB2 H N N 377 HIS HB3 H N N 378 HIS HD1 H N N 379 HIS HD2 H N N 380 HIS HE1 H N N 381 HIS HE2 H N N 382 HIS HXT H N N 383 HOH O O N N 384 HOH H1 H N N 385 HOH H2 H N N 386 ILE N N N N 387 ILE CA C N S 388 ILE C C N N 389 ILE O O N N 390 ILE CB C N S 391 ILE CG1 C N N 392 ILE CG2 C N N 393 ILE CD1 C N N 394 ILE OXT O N N 395 ILE H H N N 396 ILE H2 H N N 397 ILE HA H N N 398 ILE HB H N N 399 ILE HG12 H N N 400 ILE HG13 H N N 401 ILE HG21 H N N 402 ILE HG22 H N N 403 ILE HG23 H N N 404 ILE HD11 H N N 405 ILE HD12 H N N 406 ILE HD13 H N N 407 ILE HXT H N N 408 LEU N N N N 409 LEU CA C N S 410 LEU C C N N 411 LEU O O N N 412 LEU CB C N N 413 LEU CG C N N 414 LEU CD1 C N N 415 LEU CD2 C N N 416 LEU OXT O N N 417 LEU H H N N 418 LEU H2 H N N 419 LEU HA H N N 420 LEU HB2 H N N 421 LEU HB3 H N N 422 LEU HG H N N 423 LEU HD11 H N N 424 LEU HD12 H N N 425 LEU HD13 H N N 426 LEU HD21 H N N 427 LEU HD22 H N N 428 LEU HD23 H N N 429 LEU HXT H N N 430 LYS N N N N 431 LYS CA C N S 432 LYS C C N N 433 LYS O O N N 434 LYS CB C N N 435 LYS CG C N N 436 LYS CD C N N 437 LYS CE C N N 438 LYS NZ N N N 439 LYS OXT O N N 440 LYS H H N N 441 LYS H2 H N N 442 LYS HA H N N 443 LYS HB2 H N N 444 LYS HB3 H N N 445 LYS HG2 H N N 446 LYS HG3 H N N 447 LYS HD2 H N N 448 LYS HD3 H N N 449 LYS HE2 H N N 450 LYS HE3 H N N 451 LYS HZ1 H N N 452 LYS HZ2 H N N 453 LYS HZ3 H N N 454 LYS HXT H N N 455 MET N N N N 456 MET CA C N S 457 MET C C N N 458 MET O O N N 459 MET CB C N N 460 MET CG C N N 461 MET SD S N N 462 MET CE C N N 463 MET OXT O N N 464 MET H H N N 465 MET H2 H N N 466 MET HA H N N 467 MET HB2 H N N 468 MET HB3 H N N 469 MET HG2 H N N 470 MET HG3 H N N 471 MET HE1 H N N 472 MET HE2 H N N 473 MET HE3 H N N 474 MET HXT H N N 475 MG MG MG N N 476 NA NA NA N N 477 PHE N N N N 478 PHE CA C N S 479 PHE C C N N 480 PHE O O N N 481 PHE CB C N N 482 PHE CG C Y N 483 PHE CD1 C Y N 484 PHE CD2 C Y N 485 PHE CE1 C Y N 486 PHE CE2 C Y N 487 PHE CZ C Y N 488 PHE OXT O N N 489 PHE H H N N 490 PHE H2 H N N 491 PHE HA H N N 492 PHE HB2 H N N 493 PHE HB3 H N N 494 PHE HD1 H N N 495 PHE HD2 H N N 496 PHE HE1 H N N 497 PHE HE2 H N N 498 PHE HZ H N N 499 PHE HXT H N N 500 PPV O11 O N N 501 PPV P1 P N N 502 PPV O21 O N N 503 PPV O31 O N N 504 PPV OPP O N N 505 PPV P2 P N N 506 PPV O12 O N N 507 PPV O22 O N N 508 PPV O32 O N N 509 PPV H11 H N N 510 PPV H21 H N N 511 PPV H12 H N N 512 PPV H32 H N N 513 PRO N N N N 514 PRO CA C N S 515 PRO C C N N 516 PRO O O N N 517 PRO CB C N N 518 PRO CG C N N 519 PRO CD C N N 520 PRO OXT O N N 521 PRO H H N N 522 PRO HA H N N 523 PRO HB2 H N N 524 PRO HB3 H N N 525 PRO HG2 H N N 526 PRO HG3 H N N 527 PRO HD2 H N N 528 PRO HD3 H N N 529 PRO HXT H N N 530 SER N N N N 531 SER CA C N S 532 SER C C N N 533 SER O O N N 534 SER CB C N N 535 SER OG O N N 536 SER OXT O N N 537 SER H H N N 538 SER H2 H N N 539 SER HA H N N 540 SER HB2 H N N 541 SER HB3 H N N 542 SER HG H N N 543 SER HXT H N N 544 THR N N N N 545 THR CA C N S 546 THR C C N N 547 THR O O N N 548 THR CB C N R 549 THR OG1 O N N 550 THR CG2 C N N 551 THR OXT O N N 552 THR H H N N 553 THR H2 H N N 554 THR HA H N N 555 THR HB H N N 556 THR HG1 H N N 557 THR HG21 H N N 558 THR HG22 H N N 559 THR HG23 H N N 560 THR HXT H N N 561 TRP N N N N 562 TRP CA C N S 563 TRP C C N N 564 TRP O O N N 565 TRP CB C N N 566 TRP CG C Y N 567 TRP CD1 C Y N 568 TRP CD2 C Y N 569 TRP NE1 N Y N 570 TRP CE2 C Y N 571 TRP CE3 C Y N 572 TRP CZ2 C Y N 573 TRP CZ3 C Y N 574 TRP CH2 C Y N 575 TRP OXT O N N 576 TRP H H N N 577 TRP H2 H N N 578 TRP HA H N N 579 TRP HB2 H N N 580 TRP HB3 H N N 581 TRP HD1 H N N 582 TRP HE1 H N N 583 TRP HE3 H N N 584 TRP HZ2 H N N 585 TRP HZ3 H N N 586 TRP HH2 H N N 587 TRP HXT H N N 588 TYR N N N N 589 TYR CA C N S 590 TYR C C N N 591 TYR O O N N 592 TYR CB C N N 593 TYR CG C Y N 594 TYR CD1 C Y N 595 TYR CD2 C Y N 596 TYR CE1 C Y N 597 TYR CE2 C Y N 598 TYR CZ C Y N 599 TYR OH O N N 600 TYR OXT O N N 601 TYR H H N N 602 TYR H2 H N N 603 TYR HA H N N 604 TYR HB2 H N N 605 TYR HB3 H N N 606 TYR HD1 H N N 607 TYR HD2 H N N 608 TYR HE1 H N N 609 TYR HE2 H N N 610 TYR HH H N N 611 TYR HXT H N N 612 VAL N N N N 613 VAL CA C N S 614 VAL C C N N 615 VAL O O N N 616 VAL CB C N N 617 VAL CG1 C N N 618 VAL CG2 C N N 619 VAL OXT O N N 620 VAL H H N N 621 VAL H2 H N N 622 VAL HA H N N 623 VAL HB H N N 624 VAL HG11 H N N 625 VAL HG12 H N N 626 VAL HG13 H N N 627 VAL HG21 H N N 628 VAL HG22 H N N 629 VAL HG23 H N N 630 VAL HXT H N N 631 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DCP N1 C2 sing N N 196 DCP N1 C6 sing N N 197 DCP N1 "C1'" sing N N 198 DCP C2 N3 sing N N 199 DCP C2 O2 doub N N 200 DCP N3 C4 doub N N 201 DCP C4 C5 sing N N 202 DCP C4 N4 sing N N 203 DCP C5 C6 doub N N 204 DCP C5 H5 sing N N 205 DCP C6 H6 sing N N 206 DCP N4 HN41 sing N N 207 DCP N4 HN42 sing N N 208 DCP "C1'" "C2'" sing N N 209 DCP "C1'" "O4'" sing N N 210 DCP "C1'" "H1'" sing N N 211 DCP "C2'" "C3'" sing N N 212 DCP "C2'" "H2'1" sing N N 213 DCP "C2'" "H2'2" sing N N 214 DCP "C3'" "C4'" sing N N 215 DCP "C3'" "O3'" sing N N 216 DCP "C3'" "H3'" sing N N 217 DCP "C4'" "O4'" sing N N 218 DCP "C4'" "C5'" sing N N 219 DCP "C4'" "H4'" sing N N 220 DCP "O3'" "HO3'" sing N N 221 DCP "C5'" "O5'" sing N N 222 DCP "C5'" "H5'1" sing N N 223 DCP "C5'" "H5'2" sing N N 224 DCP "O5'" PA sing N N 225 DCP PA O1A doub N N 226 DCP PA O2A sing N N 227 DCP PA O3A sing N N 228 DCP O2A HOA2 sing N N 229 DCP O3A PB sing N N 230 DCP PB O1B doub N N 231 DCP PB O2B sing N N 232 DCP PB O3B sing N N 233 DCP O2B HOB2 sing N N 234 DCP O3B PG sing N N 235 DCP PG O1G doub N N 236 DCP PG O2G sing N N 237 DCP PG O3G sing N N 238 DCP O2G HOG2 sing N N 239 DCP O3G HOG3 sing N N 240 DG OP3 P sing N N 241 DG OP3 HOP3 sing N N 242 DG P OP1 doub N N 243 DG P OP2 sing N N 244 DG P "O5'" sing N N 245 DG OP2 HOP2 sing N N 246 DG "O5'" "C5'" sing N N 247 DG "C5'" "C4'" sing N N 248 DG "C5'" "H5'" sing N N 249 DG "C5'" "H5''" sing N N 250 DG "C4'" "O4'" sing N N 251 DG "C4'" "C3'" sing N N 252 DG "C4'" "H4'" sing N N 253 DG "O4'" "C1'" sing N N 254 DG "C3'" "O3'" sing N N 255 DG "C3'" "C2'" sing N N 256 DG "C3'" "H3'" sing N N 257 DG "O3'" "HO3'" sing N N 258 DG "C2'" "C1'" sing N N 259 DG "C2'" "H2'" sing N N 260 DG "C2'" "H2''" sing N N 261 DG "C1'" N9 sing N N 262 DG "C1'" "H1'" sing N N 263 DG N9 C8 sing Y N 264 DG N9 C4 sing Y N 265 DG C8 N7 doub Y N 266 DG C8 H8 sing N N 267 DG N7 C5 sing Y N 268 DG C5 C6 sing N N 269 DG C5 C4 doub Y N 270 DG C6 O6 doub N N 271 DG C6 N1 sing N N 272 DG N1 C2 sing N N 273 DG N1 H1 sing N N 274 DG C2 N2 sing N N 275 DG C2 N3 doub N N 276 DG N2 H21 sing N N 277 DG N2 H22 sing N N 278 DG N3 C4 sing N N 279 DT OP3 P sing N N 280 DT OP3 HOP3 sing N N 281 DT P OP1 doub N N 282 DT P OP2 sing N N 283 DT P "O5'" sing N N 284 DT OP2 HOP2 sing N N 285 DT "O5'" "C5'" sing N N 286 DT "C5'" "C4'" sing N N 287 DT "C5'" "H5'" sing N N 288 DT "C5'" "H5''" sing N N 289 DT "C4'" "O4'" sing N N 290 DT "C4'" "C3'" sing N N 291 DT "C4'" "H4'" sing N N 292 DT "O4'" "C1'" sing N N 293 DT "C3'" "O3'" sing N N 294 DT "C3'" "C2'" sing N N 295 DT "C3'" "H3'" sing N N 296 DT "O3'" "HO3'" sing N N 297 DT "C2'" "C1'" sing N N 298 DT "C2'" "H2'" sing N N 299 DT "C2'" "H2''" sing N N 300 DT "C1'" N1 sing N N 301 DT "C1'" "H1'" sing N N 302 DT N1 C2 sing N N 303 DT N1 C6 sing N N 304 DT C2 O2 doub N N 305 DT C2 N3 sing N N 306 DT N3 C4 sing N N 307 DT N3 H3 sing N N 308 DT C4 O4 doub N N 309 DT C4 C5 sing N N 310 DT C5 C7 sing N N 311 DT C5 C6 doub N N 312 DT C7 H71 sing N N 313 DT C7 H72 sing N N 314 DT C7 H73 sing N N 315 DT C6 H6 sing N N 316 GLN N CA sing N N 317 GLN N H sing N N 318 GLN N H2 sing N N 319 GLN CA C sing N N 320 GLN CA CB sing N N 321 GLN CA HA sing N N 322 GLN C O doub N N 323 GLN C OXT sing N N 324 GLN CB CG sing N N 325 GLN CB HB2 sing N N 326 GLN CB HB3 sing N N 327 GLN CG CD sing N N 328 GLN CG HG2 sing N N 329 GLN CG HG3 sing N N 330 GLN CD OE1 doub N N 331 GLN CD NE2 sing N N 332 GLN NE2 HE21 sing N N 333 GLN NE2 HE22 sing N N 334 GLN OXT HXT sing N N 335 GLU N CA sing N N 336 GLU N H sing N N 337 GLU N H2 sing N N 338 GLU CA C sing N N 339 GLU CA CB sing N N 340 GLU CA HA sing N N 341 GLU C O doub N N 342 GLU C OXT sing N N 343 GLU CB CG sing N N 344 GLU CB HB2 sing N N 345 GLU CB HB3 sing N N 346 GLU CG CD sing N N 347 GLU CG HG2 sing N N 348 GLU CG HG3 sing N N 349 GLU CD OE1 doub N N 350 GLU CD OE2 sing N N 351 GLU OE2 HE2 sing N N 352 GLU OXT HXT sing N N 353 GLY N CA sing N N 354 GLY N H sing N N 355 GLY N H2 sing N N 356 GLY CA C sing N N 357 GLY CA HA2 sing N N 358 GLY CA HA3 sing N N 359 GLY C O doub N N 360 GLY C OXT sing N N 361 GLY OXT HXT sing N N 362 HIS N CA sing N N 363 HIS N H sing N N 364 HIS N H2 sing N N 365 HIS CA C sing N N 366 HIS CA CB sing N N 367 HIS CA HA sing N N 368 HIS C O doub N N 369 HIS C OXT sing N N 370 HIS CB CG sing N N 371 HIS CB HB2 sing N N 372 HIS CB HB3 sing N N 373 HIS CG ND1 sing Y N 374 HIS CG CD2 doub Y N 375 HIS ND1 CE1 doub Y N 376 HIS ND1 HD1 sing N N 377 HIS CD2 NE2 sing Y N 378 HIS CD2 HD2 sing N N 379 HIS CE1 NE2 sing Y N 380 HIS CE1 HE1 sing N N 381 HIS NE2 HE2 sing N N 382 HIS OXT HXT sing N N 383 HOH O H1 sing N N 384 HOH O H2 sing N N 385 ILE N CA sing N N 386 ILE N H sing N N 387 ILE N H2 sing N N 388 ILE CA C sing N N 389 ILE CA CB sing N N 390 ILE CA HA sing N N 391 ILE C O doub N N 392 ILE C OXT sing N N 393 ILE CB CG1 sing N N 394 ILE CB CG2 sing N N 395 ILE CB HB sing N N 396 ILE CG1 CD1 sing N N 397 ILE CG1 HG12 sing N N 398 ILE CG1 HG13 sing N N 399 ILE CG2 HG21 sing N N 400 ILE CG2 HG22 sing N N 401 ILE CG2 HG23 sing N N 402 ILE CD1 HD11 sing N N 403 ILE CD1 HD12 sing N N 404 ILE CD1 HD13 sing N N 405 ILE OXT HXT sing N N 406 LEU N CA sing N N 407 LEU N H sing N N 408 LEU N H2 sing N N 409 LEU CA C sing N N 410 LEU CA CB sing N N 411 LEU CA HA sing N N 412 LEU C O doub N N 413 LEU C OXT sing N N 414 LEU CB CG sing N N 415 LEU CB HB2 sing N N 416 LEU CB HB3 sing N N 417 LEU CG CD1 sing N N 418 LEU CG CD2 sing N N 419 LEU CG HG sing N N 420 LEU CD1 HD11 sing N N 421 LEU CD1 HD12 sing N N 422 LEU CD1 HD13 sing N N 423 LEU CD2 HD21 sing N N 424 LEU CD2 HD22 sing N N 425 LEU CD2 HD23 sing N N 426 LEU OXT HXT sing N N 427 LYS N CA sing N N 428 LYS N H sing N N 429 LYS N H2 sing N N 430 LYS CA C sing N N 431 LYS CA CB sing N N 432 LYS CA HA sing N N 433 LYS C O doub N N 434 LYS C OXT sing N N 435 LYS CB CG sing N N 436 LYS CB HB2 sing N N 437 LYS CB HB3 sing N N 438 LYS CG CD sing N N 439 LYS CG HG2 sing N N 440 LYS CG HG3 sing N N 441 LYS CD CE sing N N 442 LYS CD HD2 sing N N 443 LYS CD HD3 sing N N 444 LYS CE NZ sing N N 445 LYS CE HE2 sing N N 446 LYS CE HE3 sing N N 447 LYS NZ HZ1 sing N N 448 LYS NZ HZ2 sing N N 449 LYS NZ HZ3 sing N N 450 LYS OXT HXT sing N N 451 MET N CA sing N N 452 MET N H sing N N 453 MET N H2 sing N N 454 MET CA C sing N N 455 MET CA CB sing N N 456 MET CA HA sing N N 457 MET C O doub N N 458 MET C OXT sing N N 459 MET CB CG sing N N 460 MET CB HB2 sing N N 461 MET CB HB3 sing N N 462 MET CG SD sing N N 463 MET CG HG2 sing N N 464 MET CG HG3 sing N N 465 MET SD CE sing N N 466 MET CE HE1 sing N N 467 MET CE HE2 sing N N 468 MET CE HE3 sing N N 469 MET OXT HXT sing N N 470 PHE N CA sing N N 471 PHE N H sing N N 472 PHE N H2 sing N N 473 PHE CA C sing N N 474 PHE CA CB sing N N 475 PHE CA HA sing N N 476 PHE C O doub N N 477 PHE C OXT sing N N 478 PHE CB CG sing N N 479 PHE CB HB2 sing N N 480 PHE CB HB3 sing N N 481 PHE CG CD1 doub Y N 482 PHE CG CD2 sing Y N 483 PHE CD1 CE1 sing Y N 484 PHE CD1 HD1 sing N N 485 PHE CD2 CE2 doub Y N 486 PHE CD2 HD2 sing N N 487 PHE CE1 CZ doub Y N 488 PHE CE1 HE1 sing N N 489 PHE CE2 CZ sing Y N 490 PHE CE2 HE2 sing N N 491 PHE CZ HZ sing N N 492 PHE OXT HXT sing N N 493 PPV O11 P1 sing N N 494 PPV O11 H11 sing N N 495 PPV P1 O21 sing N N 496 PPV P1 O31 doub N N 497 PPV P1 OPP sing N N 498 PPV O21 H21 sing N N 499 PPV OPP P2 sing N N 500 PPV P2 O12 sing N N 501 PPV P2 O22 doub N N 502 PPV P2 O32 sing N N 503 PPV O12 H12 sing N N 504 PPV O32 H32 sing N N 505 PRO N CA sing N N 506 PRO N CD sing N N 507 PRO N H sing N N 508 PRO CA C sing N N 509 PRO CA CB sing N N 510 PRO CA HA sing N N 511 PRO C O doub N N 512 PRO C OXT sing N N 513 PRO CB CG sing N N 514 PRO CB HB2 sing N N 515 PRO CB HB3 sing N N 516 PRO CG CD sing N N 517 PRO CG HG2 sing N N 518 PRO CG HG3 sing N N 519 PRO CD HD2 sing N N 520 PRO CD HD3 sing N N 521 PRO OXT HXT sing N N 522 SER N CA sing N N 523 SER N H sing N N 524 SER N H2 sing N N 525 SER CA C sing N N 526 SER CA CB sing N N 527 SER CA HA sing N N 528 SER C O doub N N 529 SER C OXT sing N N 530 SER CB OG sing N N 531 SER CB HB2 sing N N 532 SER CB HB3 sing N N 533 SER OG HG sing N N 534 SER OXT HXT sing N N 535 THR N CA sing N N 536 THR N H sing N N 537 THR N H2 sing N N 538 THR CA C sing N N 539 THR CA CB sing N N 540 THR CA HA sing N N 541 THR C O doub N N 542 THR C OXT sing N N 543 THR CB OG1 sing N N 544 THR CB CG2 sing N N 545 THR CB HB sing N N 546 THR OG1 HG1 sing N N 547 THR CG2 HG21 sing N N 548 THR CG2 HG22 sing N N 549 THR CG2 HG23 sing N N 550 THR OXT HXT sing N N 551 TRP N CA sing N N 552 TRP N H sing N N 553 TRP N H2 sing N N 554 TRP CA C sing N N 555 TRP CA CB sing N N 556 TRP CA HA sing N N 557 TRP C O doub N N 558 TRP C OXT sing N N 559 TRP CB CG sing N N 560 TRP CB HB2 sing N N 561 TRP CB HB3 sing N N 562 TRP CG CD1 doub Y N 563 TRP CG CD2 sing Y N 564 TRP CD1 NE1 sing Y N 565 TRP CD1 HD1 sing N N 566 TRP CD2 CE2 doub Y N 567 TRP CD2 CE3 sing Y N 568 TRP NE1 CE2 sing Y N 569 TRP NE1 HE1 sing N N 570 TRP CE2 CZ2 sing Y N 571 TRP CE3 CZ3 doub Y N 572 TRP CE3 HE3 sing N N 573 TRP CZ2 CH2 doub Y N 574 TRP CZ2 HZ2 sing N N 575 TRP CZ3 CH2 sing Y N 576 TRP CZ3 HZ3 sing N N 577 TRP CH2 HH2 sing N N 578 TRP OXT HXT sing N N 579 TYR N CA sing N N 580 TYR N H sing N N 581 TYR N H2 sing N N 582 TYR CA C sing N N 583 TYR CA CB sing N N 584 TYR CA HA sing N N 585 TYR C O doub N N 586 TYR C OXT sing N N 587 TYR CB CG sing N N 588 TYR CB HB2 sing N N 589 TYR CB HB3 sing N N 590 TYR CG CD1 doub Y N 591 TYR CG CD2 sing Y N 592 TYR CD1 CE1 sing Y N 593 TYR CD1 HD1 sing N N 594 TYR CD2 CE2 doub Y N 595 TYR CD2 HD2 sing N N 596 TYR CE1 CZ doub Y N 597 TYR CE1 HE1 sing N N 598 TYR CE2 CZ sing Y N 599 TYR CE2 HE2 sing N N 600 TYR CZ OH sing N N 601 TYR OH HH sing N N 602 TYR OXT HXT sing N N 603 VAL N CA sing N N 604 VAL N H sing N N 605 VAL N H2 sing N N 606 VAL CA C sing N N 607 VAL CA CB sing N N 608 VAL CA HA sing N N 609 VAL C O doub N N 610 VAL C OXT sing N N 611 VAL CB CG1 sing N N 612 VAL CB CG2 sing N N 613 VAL CB HB sing N N 614 VAL CG1 HG11 sing N N 615 VAL CG1 HG12 sing N N 616 VAL CG1 HG13 sing N N 617 VAL CG2 HG21 sing N N 618 VAL CG2 HG22 sing N N 619 VAL CG2 HG23 sing N N 620 VAL OXT HXT sing N N 621 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4RPZ 'double helix' 4RPZ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 -0.141 -0.001 -0.202 -12.426 -1.269 0.480 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 -0.009 0.108 0.340 -3.988 -6.781 -0.625 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 0.085 0.126 -0.078 -1.311 -12.040 -0.043 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 -0.151 -0.157 0.637 11.174 -11.768 0.957 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 C DG 1 1_555 D DC 16 1_555 -0.274 -0.481 0.724 -2.204 -15.562 -6.084 5 P_DG1:DC16_T P 1 ? T 16 ? 19 1 1 C DC 2 1_555 D DG 15 1_555 0.238 0.023 0.342 -6.697 -18.456 5.813 6 P_DC2:DG15_T P 2 ? T 15 ? 19 1 1 C DT 3 1_555 D DA 14 1_555 -0.190 -0.072 -0.074 2.982 -11.257 -1.130 7 P_DT3:DA14_T P 3 ? T 14 ? 20 1 1 C DG 4 1_555 D DC 13 1_555 -0.176 -0.071 0.010 1.355 -12.194 0.506 8 P_DG4:DC13_T P 4 ? T 13 ? 19 1 1 C DA 5 1_555 D DT 12 1_555 -0.717 0.034 0.053 -5.317 -11.063 0.560 9 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 C DT 6 1_555 D DA 11 1_555 0.246 -0.040 0.073 1.990 -12.698 2.439 10 P_DT6:DA11_T P 6 ? T 11 ? 20 1 1 C DG 7 1_555 D DC 10 1_555 -0.142 -0.104 -0.178 -3.235 -10.622 -1.242 11 P_DG7:DC10_T P 7 ? T 10 ? 19 1 1 C DC 8 1_555 D DG 9 1_555 0.349 -0.120 0.092 -15.689 -9.865 4.335 12 P_DC8:DG9_T P 8 ? T 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.329 0.063 -0.744 -26.708 -5.564 3.475 13 P_DG9:DC8_T P 9 ? T 8 ? 19 1 1 C DC 10 1_555 D DG 7 1_555 0.164 -0.008 -0.101 -12.683 9.123 -1.055 14 P_DC10:DG7_T P 10 ? T 7 ? 19 1 1 C DC 11 1_555 D 8OG 6 1_555 0.167 -0.146 -0.504 6.933 12.006 0.667 15 P_DC11:8OG6_T P 11 ? T 6 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.802 -0.432 3.157 -3.496 0.033 29.606 -0.846 0.845 3.228 0.064 6.812 29.807 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 0.515 0.224 3.124 6.750 -1.064 37.135 0.479 0.048 3.159 -1.654 -10.491 37.737 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 0.228 0.532 3.071 -6.489 5.177 31.849 0.103 -1.452 3.014 9.239 11.581 32.886 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 C DG 1 1_555 D DC 16 1_555 C DC 2 1_555 D DG 15 1_555 -0.260 -1.008 3.283 4.538 0.826 35.429 -1.762 1.077 3.202 1.350 -7.417 35.719 4 PP_DG1DC2:DG15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DC 2 1_555 D DG 15 1_555 C DT 3 1_555 D DA 14 1_555 -0.442 -0.014 2.982 5.826 10.485 29.547 -1.750 1.764 2.689 19.572 -10.876 31.839 5 PP_DC2DT3:DA14DG15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DG 4 1_555 D DC 13 1_555 0.752 -0.165 3.278 0.574 11.508 35.189 -1.809 -1.108 3.087 18.435 -0.919 36.971 6 PP_DT3DG4:DC13DA14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DG 4 1_555 D DC 13 1_555 C DA 5 1_555 D DT 12 1_555 0.043 -0.381 3.351 -0.733 4.382 35.148 -1.282 -0.180 3.280 7.221 1.208 35.419 7 PP_DG4DA5:DT12DC13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DA 5 1_555 D DT 12 1_555 C DT 6 1_555 D DA 11 1_555 -0.150 -0.669 3.153 -1.265 -2.256 33.284 -0.802 0.058 3.193 -3.931 2.205 33.381 8 PP_DA5DT6:DA11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DT 6 1_555 D DA 11 1_555 C DG 7 1_555 D DC 10 1_555 -0.062 -0.637 3.204 0.583 10.389 33.154 -2.584 0.189 2.879 17.673 -0.992 34.705 9 PP_DT6DG7:DC10DA11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DG 7 1_555 D DC 10 1_555 C DC 8 1_555 D DG 9 1_555 0.439 -0.504 3.642 -1.552 1.879 35.766 -1.118 -0.959 3.591 3.055 2.523 35.847 10 PP_DG7DC8:DG9DC10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DC 8 1_555 D DG 9 1_555 C DG 9 1_555 D DC 8 1_555 1.372 -0.754 3.657 9.742 6.976 31.754 -2.593 -0.539 3.666 12.219 -17.064 33.885 11 PP_DC8DG9:DC8DG9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DC 10 1_555 D DG 7 1_555 -0.519 -0.912 3.217 -2.698 7.030 32.230 -2.744 0.474 2.989 12.452 4.778 33.075 12 PP_DG9DC10:DG7DC8_TT P 9 ? T 8 ? P 10 ? T 7 ? 1 C DC 10 1_555 D DG 7 1_555 C DC 11 1_555 D 8OG 6 1_555 0.090 -0.383 2.995 6.101 8.559 22.009 -3.323 1.509 2.599 20.950 -14.934 24.362 13 PP_DC10DC11:8OG6DG7_TT P 10 ? T 7 ? P 11 ? T 6 ? # _atom_sites.entry_id 4RPZ _atom_sites.fract_transf_matrix[1][1] 0.020239 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005880 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012607 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018794 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N NA O P S # loop_