data_4RQ6 # _entry.id 4RQ6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RQ6 pdb_00004rq6 10.2210/pdb4rq6/pdb NDB NA3290 ? ? RCSB RCSB087659 ? ? WWPDB D_1000087659 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-15 2 'Structure model' 1 1 2015-05-06 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.value' 24 3 'Structure model' '_struct_conn.pdbx_dist_value' 25 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 40 3 'Structure model' '_struct_ref_seq_dif.details' 41 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 42 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 43 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RQ6 _pdbx_database_status.recvd_initial_deposition_date 2014-10-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.content_type 4RPX PDB . unspecified 4RPY PDB . unspecified 4RPZ PDB . unspecified 4RQ0 PDB . unspecified 4RQ1 PDB . unspecified 4RQ2 PDB . unspecified 4RQ3 PDB . unspecified 4RQ4 PDB . unspecified 4RQ5 PDB . unspecified 4RQ7 PDB . unspecified 4RQ8 PDB . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vyas, R.' 1 'Suo, Z.' 2 # _citation.id primary _citation.title 'Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 137 _citation.page_first 5225 _citation.page_last 5230 _citation.year 2015 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25825995 _citation.pdbx_database_id_DOI 10.1021/jacs.5b02109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vyas, R.' 1 ? primary 'Reed, A.J.' 2 ? primary 'Tokarsky, E.J.' 3 ? primary 'Suo, Z.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 39258.785 1 '2.7.7.7, 4.2.99.-' ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*A)-3') ; 3374.210 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4885.157 1 ? ? ? ? 5 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 6 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 8 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 9 water nat water 18.015 71 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 '5-mer phosphorylated Downstream Primer' 3 '11-mer Primer' 4 '16-mer Template' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; ;MGMSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLA TGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQM QDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGV CQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKD IFDYIQWKYREPKDRSEHHHHHH ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)(DA)' GCTGATGCGCA P ? 4 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(8OG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGGCGCATCAGC T ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 PYROPHOSPHATE PPV 6 'MAGNESIUM ION' MG 7 'SODIUM ION' NA 8 'ACETATE ION' ACT 9 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 MET n 1 4 SER n 1 5 LYS n 1 6 ARG n 1 7 LYS n 1 8 ALA n 1 9 PRO n 1 10 GLN n 1 11 GLU n 1 12 THR n 1 13 LEU n 1 14 ASN n 1 15 GLY n 1 16 GLY n 1 17 ILE n 1 18 THR n 1 19 ASP n 1 20 MET n 1 21 LEU n 1 22 THR n 1 23 GLU n 1 24 LEU n 1 25 ALA n 1 26 ASN n 1 27 PHE n 1 28 GLU n 1 29 LYS n 1 30 ASN n 1 31 VAL n 1 32 SER n 1 33 GLN n 1 34 ALA n 1 35 ILE n 1 36 HIS n 1 37 LYS n 1 38 TYR n 1 39 ASN n 1 40 ALA n 1 41 TYR n 1 42 ARG n 1 43 LYS n 1 44 ALA n 1 45 ALA n 1 46 SER n 1 47 VAL n 1 48 ILE n 1 49 ALA n 1 50 LYS n 1 51 TYR n 1 52 PRO n 1 53 HIS n 1 54 LYS n 1 55 ILE n 1 56 LYS n 1 57 SER n 1 58 GLY n 1 59 ALA n 1 60 GLU n 1 61 ALA n 1 62 LYS n 1 63 LYS n 1 64 LEU n 1 65 PRO n 1 66 GLY n 1 67 VAL n 1 68 GLY n 1 69 THR n 1 70 LYS n 1 71 ILE n 1 72 ALA n 1 73 GLU n 1 74 LYS n 1 75 ILE n 1 76 ASP n 1 77 GLU n 1 78 PHE n 1 79 LEU n 1 80 ALA n 1 81 THR n 1 82 GLY n 1 83 LYS n 1 84 LEU n 1 85 ARG n 1 86 LYS n 1 87 LEU n 1 88 GLU n 1 89 LYS n 1 90 ILE n 1 91 ARG n 1 92 GLN n 1 93 ASP n 1 94 ASP n 1 95 THR n 1 96 SER n 1 97 SER n 1 98 SER n 1 99 ILE n 1 100 ASN n 1 101 PHE n 1 102 LEU n 1 103 THR n 1 104 ARG n 1 105 VAL n 1 106 SER n 1 107 GLY n 1 108 ILE n 1 109 GLY n 1 110 PRO n 1 111 SER n 1 112 ALA n 1 113 ALA n 1 114 ARG n 1 115 LYS n 1 116 PHE n 1 117 VAL n 1 118 ASP n 1 119 GLU n 1 120 GLY n 1 121 ILE n 1 122 LYS n 1 123 THR n 1 124 LEU n 1 125 GLU n 1 126 ASP n 1 127 LEU n 1 128 ARG n 1 129 LYS n 1 130 ASN n 1 131 GLU n 1 132 ASP n 1 133 LYS n 1 134 LEU n 1 135 ASN n 1 136 HIS n 1 137 HIS n 1 138 GLN n 1 139 ARG n 1 140 ILE n 1 141 GLY n 1 142 LEU n 1 143 LYS n 1 144 TYR n 1 145 PHE n 1 146 GLY n 1 147 ASP n 1 148 PHE n 1 149 GLU n 1 150 LYS n 1 151 ARG n 1 152 ILE n 1 153 PRO n 1 154 ARG n 1 155 GLU n 1 156 GLU n 1 157 MET n 1 158 LEU n 1 159 GLN n 1 160 MET n 1 161 GLN n 1 162 ASP n 1 163 ILE n 1 164 VAL n 1 165 LEU n 1 166 ASN n 1 167 GLU n 1 168 VAL n 1 169 LYS n 1 170 LYS n 1 171 VAL n 1 172 ASP n 1 173 SER n 1 174 GLU n 1 175 TYR n 1 176 ILE n 1 177 ALA n 1 178 THR n 1 179 VAL n 1 180 CYS n 1 181 GLY n 1 182 SER n 1 183 PHE n 1 184 ARG n 1 185 ARG n 1 186 GLY n 1 187 ALA n 1 188 GLU n 1 189 SER n 1 190 SER n 1 191 GLY n 1 192 ASP n 1 193 MET n 1 194 ASP n 1 195 VAL n 1 196 LEU n 1 197 LEU n 1 198 THR n 1 199 HIS n 1 200 PRO n 1 201 SER n 1 202 PHE n 1 203 THR n 1 204 SER n 1 205 GLU n 1 206 SER n 1 207 THR n 1 208 LYS n 1 209 GLN n 1 210 PRO n 1 211 LYS n 1 212 LEU n 1 213 LEU n 1 214 HIS n 1 215 GLN n 1 216 VAL n 1 217 VAL n 1 218 GLU n 1 219 GLN n 1 220 LEU n 1 221 GLN n 1 222 LYS n 1 223 VAL n 1 224 HIS n 1 225 PHE n 1 226 ILE n 1 227 THR n 1 228 ASP n 1 229 THR n 1 230 LEU n 1 231 SER n 1 232 LYS n 1 233 GLY n 1 234 GLU n 1 235 THR n 1 236 LYS n 1 237 PHE n 1 238 MET n 1 239 GLY n 1 240 VAL n 1 241 CYS n 1 242 GLN n 1 243 LEU n 1 244 PRO n 1 245 SER n 1 246 LYS n 1 247 ASN n 1 248 ASP n 1 249 GLU n 1 250 LYS n 1 251 GLU n 1 252 TYR n 1 253 PRO n 1 254 HIS n 1 255 ARG n 1 256 ARG n 1 257 ILE n 1 258 ASP n 1 259 ILE n 1 260 ARG n 1 261 LEU n 1 262 ILE n 1 263 PRO n 1 264 LYS n 1 265 ASP n 1 266 GLN n 1 267 TYR n 1 268 TYR n 1 269 CYS n 1 270 GLY n 1 271 VAL n 1 272 LEU n 1 273 TYR n 1 274 PHE n 1 275 THR n 1 276 GLY n 1 277 SER n 1 278 ASP n 1 279 ILE n 1 280 PHE n 1 281 ASN n 1 282 LYS n 1 283 ASN n 1 284 MET n 1 285 ARG n 1 286 ALA n 1 287 HIS n 1 288 ALA n 1 289 LEU n 1 290 GLU n 1 291 LYS n 1 292 GLY n 1 293 PHE n 1 294 THR n 1 295 ILE n 1 296 ASN n 1 297 GLU n 1 298 TYR n 1 299 THR n 1 300 ILE n 1 301 ARG n 1 302 PRO n 1 303 LEU n 1 304 GLY n 1 305 VAL n 1 306 THR n 1 307 GLY n 1 308 VAL n 1 309 ALA n 1 310 GLY n 1 311 GLU n 1 312 PRO n 1 313 LEU n 1 314 PRO n 1 315 VAL n 1 316 ASP n 1 317 SER n 1 318 GLU n 1 319 LYS n 1 320 ASP n 1 321 ILE n 1 322 PHE n 1 323 ASP n 1 324 TYR n 1 325 ILE n 1 326 GLN n 1 327 TRP n 1 328 LYS n 1 329 TYR n 1 330 ARG n 1 331 GLU n 1 332 PRO n 1 333 LYS n 1 334 ASP n 1 335 ARG n 1 336 SER n 1 337 GLU n 1 338 HIS n 1 339 HIS n 1 340 HIS n 1 341 HIS n 1 342 HIS n 1 343 HIS n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DC n 3 11 DA n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 8OG n 4 7 DG n 4 8 DC n 4 9 DG n 4 10 DC n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DG n 4 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POL B, POLB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 ? 3 1 sample ? ? 'synthetic construct' ? 32630 ? 4 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 GLY 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 SER 4 2 ? ? ? A . n A 1 5 LYS 5 3 ? ? ? A . n A 1 6 ARG 6 4 ? ? ? A . n A 1 7 LYS 7 5 ? ? ? A . n A 1 8 ALA 8 6 ? ? ? A . n A 1 9 PRO 9 7 ? ? ? A . n A 1 10 GLN 10 8 ? ? ? A . n A 1 11 GLU 11 9 ? ? ? A . n A 1 12 THR 12 10 10 THR THR A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 ASN 14 12 12 ASN ASN A . n A 1 15 GLY 15 13 13 GLY GLY A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 ILE 17 15 15 ILE ILE A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 ASP 19 17 17 ASP ASP A . n A 1 20 MET 20 18 18 MET MET A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 THR 22 20 20 THR THR A . n A 1 23 GLU 23 21 21 GLU GLU A . n A 1 24 LEU 24 22 22 LEU LEU A . n A 1 25 ALA 25 23 23 ALA ALA A . n A 1 26 ASN 26 24 24 ASN ASN A . n A 1 27 PHE 27 25 25 PHE PHE A . n A 1 28 GLU 28 26 26 GLU GLU A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 ASN 30 28 28 ASN ASN A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 SER 32 30 30 SER SER A . n A 1 33 GLN 33 31 31 GLN GLN A . n A 1 34 ALA 34 32 32 ALA ALA A . n A 1 35 ILE 35 33 33 ILE ILE A . n A 1 36 HIS 36 34 34 HIS HIS A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 TYR 38 36 36 TYR TYR A . n A 1 39 ASN 39 37 37 ASN ASN A . n A 1 40 ALA 40 38 38 ALA ALA A . n A 1 41 TYR 41 39 39 TYR TYR A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 ALA 44 42 42 ALA ALA A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 SER 46 44 44 SER SER A . n A 1 47 VAL 47 45 45 VAL VAL A . n A 1 48 ILE 48 46 46 ILE ILE A . n A 1 49 ALA 49 47 47 ALA ALA A . n A 1 50 LYS 50 48 48 LYS LYS A . n A 1 51 TYR 51 49 49 TYR TYR A . n A 1 52 PRO 52 50 50 PRO PRO A . n A 1 53 HIS 53 51 51 HIS HIS A . n A 1 54 LYS 54 52 52 LYS LYS A . n A 1 55 ILE 55 53 53 ILE ILE A . n A 1 56 LYS 56 54 54 LYS LYS A . n A 1 57 SER 57 55 55 SER SER A . n A 1 58 GLY 58 56 56 GLY GLY A . n A 1 59 ALA 59 57 57 ALA ALA A . n A 1 60 GLU 60 58 58 GLU GLU A . n A 1 61 ALA 61 59 59 ALA ALA A . n A 1 62 LYS 62 60 60 LYS LYS A . n A 1 63 LYS 63 61 61 LYS LYS A . n A 1 64 LEU 64 62 62 LEU LEU A . n A 1 65 PRO 65 63 63 PRO PRO A . n A 1 66 GLY 66 64 64 GLY GLY A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 GLY 68 66 66 GLY GLY A . n A 1 69 THR 69 67 67 THR THR A . n A 1 70 LYS 70 68 68 LYS LYS A . n A 1 71 ILE 71 69 69 ILE ILE A . n A 1 72 ALA 72 70 70 ALA ALA A . n A 1 73 GLU 73 71 71 GLU GLU A . n A 1 74 LYS 74 72 72 LYS LYS A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 ASP 76 74 74 ASP ASP A . n A 1 77 GLU 77 75 75 GLU GLU A . n A 1 78 PHE 78 76 76 PHE PHE A . n A 1 79 LEU 79 77 77 LEU LEU A . n A 1 80 ALA 80 78 78 ALA ALA A . n A 1 81 THR 81 79 79 THR THR A . n A 1 82 GLY 82 80 80 GLY GLY A . n A 1 83 LYS 83 81 81 LYS LYS A . n A 1 84 LEU 84 82 82 LEU LEU A . n A 1 85 ARG 85 83 83 ARG ARG A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 GLU 88 86 86 GLU GLU A . n A 1 89 LYS 89 87 87 LYS LYS A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 ARG 91 89 89 ARG ARG A . n A 1 92 GLN 92 90 90 GLN GLN A . n A 1 93 ASP 93 91 91 ASP ASP A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 THR 95 93 93 THR THR A . n A 1 96 SER 96 94 94 SER SER A . n A 1 97 SER 97 95 95 SER SER A . n A 1 98 SER 98 96 96 SER SER A . n A 1 99 ILE 99 97 97 ILE ILE A . n A 1 100 ASN 100 98 98 ASN ASN A . n A 1 101 PHE 101 99 99 PHE PHE A . n A 1 102 LEU 102 100 100 LEU LEU A . n A 1 103 THR 103 101 101 THR THR A . n A 1 104 ARG 104 102 102 ARG ARG A . n A 1 105 VAL 105 103 103 VAL VAL A . n A 1 106 SER 106 104 104 SER SER A . n A 1 107 GLY 107 105 105 GLY GLY A . n A 1 108 ILE 108 106 106 ILE ILE A . n A 1 109 GLY 109 107 107 GLY GLY A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 SER 111 109 109 SER SER A . n A 1 112 ALA 112 110 110 ALA ALA A . n A 1 113 ALA 113 111 111 ALA ALA A . n A 1 114 ARG 114 112 112 ARG ARG A . n A 1 115 LYS 115 113 113 LYS LYS A . n A 1 116 PHE 116 114 114 PHE PHE A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 ASP 118 116 116 ASP ASP A . n A 1 119 GLU 119 117 117 GLU GLU A . n A 1 120 GLY 120 118 118 GLY GLY A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 THR 123 121 121 THR THR A . n A 1 124 LEU 124 122 122 LEU LEU A . n A 1 125 GLU 125 123 123 GLU GLU A . n A 1 126 ASP 126 124 124 ASP ASP A . n A 1 127 LEU 127 125 125 LEU LEU A . n A 1 128 ARG 128 126 126 ARG ARG A . n A 1 129 LYS 129 127 127 LYS LYS A . n A 1 130 ASN 130 128 128 ASN ASN A . n A 1 131 GLU 131 129 129 GLU GLU A . n A 1 132 ASP 132 130 130 ASP ASP A . n A 1 133 LYS 133 131 131 LYS LYS A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ASN 135 133 133 ASN ASN A . n A 1 136 HIS 136 134 134 HIS HIS A . n A 1 137 HIS 137 135 135 HIS HIS A . n A 1 138 GLN 138 136 136 GLN GLN A . n A 1 139 ARG 139 137 137 ARG ARG A . n A 1 140 ILE 140 138 138 ILE ILE A . n A 1 141 GLY 141 139 139 GLY GLY A . n A 1 142 LEU 142 140 140 LEU LEU A . n A 1 143 LYS 143 141 141 LYS LYS A . n A 1 144 TYR 144 142 142 TYR TYR A . n A 1 145 PHE 145 143 143 PHE PHE A . n A 1 146 GLY 146 144 144 GLY GLY A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 PHE 148 146 146 PHE PHE A . n A 1 149 GLU 149 147 147 GLU GLU A . n A 1 150 LYS 150 148 148 LYS LYS A . n A 1 151 ARG 151 149 149 ARG ARG A . n A 1 152 ILE 152 150 150 ILE ILE A . n A 1 153 PRO 153 151 151 PRO PRO A . n A 1 154 ARG 154 152 152 ARG ARG A . n A 1 155 GLU 155 153 153 GLU GLU A . n A 1 156 GLU 156 154 154 GLU GLU A . n A 1 157 MET 157 155 155 MET MET A . n A 1 158 LEU 158 156 156 LEU LEU A . n A 1 159 GLN 159 157 157 GLN GLN A . n A 1 160 MET 160 158 158 MET MET A . n A 1 161 GLN 161 159 159 GLN GLN A . n A 1 162 ASP 162 160 160 ASP ASP A . n A 1 163 ILE 163 161 161 ILE ILE A . n A 1 164 VAL 164 162 162 VAL VAL A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 ASN 166 164 164 ASN ASN A . n A 1 167 GLU 167 165 165 GLU GLU A . n A 1 168 VAL 168 166 166 VAL VAL A . n A 1 169 LYS 169 167 167 LYS LYS A . n A 1 170 LYS 170 168 168 LYS LYS A . n A 1 171 VAL 171 169 169 VAL VAL A . n A 1 172 ASP 172 170 170 ASP ASP A . n A 1 173 SER 173 171 171 SER SER A . n A 1 174 GLU 174 172 172 GLU GLU A . n A 1 175 TYR 175 173 173 TYR TYR A . n A 1 176 ILE 176 174 174 ILE ILE A . n A 1 177 ALA 177 175 175 ALA ALA A . n A 1 178 THR 178 176 176 THR THR A . n A 1 179 VAL 179 177 177 VAL VAL A . n A 1 180 CYS 180 178 178 CYS CYS A . n A 1 181 GLY 181 179 179 GLY GLY A . n A 1 182 SER 182 180 180 SER SER A . n A 1 183 PHE 183 181 181 PHE PHE A . n A 1 184 ARG 184 182 182 ARG ARG A . n A 1 185 ARG 185 183 183 ARG ARG A . n A 1 186 GLY 186 184 184 GLY GLY A . n A 1 187 ALA 187 185 185 ALA ALA A . n A 1 188 GLU 188 186 186 GLU GLU A . n A 1 189 SER 189 187 187 SER SER A . n A 1 190 SER 190 188 188 SER SER A . n A 1 191 GLY 191 189 189 GLY GLY A . n A 1 192 ASP 192 190 190 ASP ASP A . n A 1 193 MET 193 191 191 MET MET A . n A 1 194 ASP 194 192 192 ASP ASP A . n A 1 195 VAL 195 193 193 VAL VAL A . n A 1 196 LEU 196 194 194 LEU LEU A . n A 1 197 LEU 197 195 195 LEU LEU A . n A 1 198 THR 198 196 196 THR THR A . n A 1 199 HIS 199 197 197 HIS HIS A . n A 1 200 PRO 200 198 198 PRO PRO A . n A 1 201 SER 201 199 199 SER SER A . n A 1 202 PHE 202 200 200 PHE PHE A . n A 1 203 THR 203 201 201 THR THR A . n A 1 204 SER 204 202 202 SER SER A . n A 1 205 GLU 205 203 203 GLU GLU A . n A 1 206 SER 206 204 204 SER SER A . n A 1 207 THR 207 205 205 THR THR A . n A 1 208 LYS 208 206 206 LYS LYS A . n A 1 209 GLN 209 207 207 GLN GLN A . n A 1 210 PRO 210 208 208 PRO PRO A . n A 1 211 LYS 211 209 209 LYS LYS A . n A 1 212 LEU 212 210 210 LEU LEU A . n A 1 213 LEU 213 211 211 LEU LEU A . n A 1 214 HIS 214 212 212 HIS HIS A . n A 1 215 GLN 215 213 213 GLN GLN A . n A 1 216 VAL 216 214 214 VAL VAL A . n A 1 217 VAL 217 215 215 VAL VAL A . n A 1 218 GLU 218 216 216 GLU GLU A . n A 1 219 GLN 219 217 217 GLN GLN A . n A 1 220 LEU 220 218 218 LEU LEU A . n A 1 221 GLN 221 219 219 GLN GLN A . n A 1 222 LYS 222 220 220 LYS LYS A . n A 1 223 VAL 223 221 221 VAL VAL A . n A 1 224 HIS 224 222 222 HIS HIS A . n A 1 225 PHE 225 223 223 PHE PHE A . n A 1 226 ILE 226 224 224 ILE ILE A . n A 1 227 THR 227 225 225 THR THR A . n A 1 228 ASP 228 226 226 ASP ASP A . n A 1 229 THR 229 227 227 THR THR A . n A 1 230 LEU 230 228 228 LEU LEU A . n A 1 231 SER 231 229 229 SER SER A . n A 1 232 LYS 232 230 230 LYS LYS A . n A 1 233 GLY 233 231 231 GLY GLY A . n A 1 234 GLU 234 232 232 GLU GLU A . n A 1 235 THR 235 233 233 THR THR A . n A 1 236 LYS 236 234 234 LYS LYS A . n A 1 237 PHE 237 235 235 PHE PHE A . n A 1 238 MET 238 236 236 MET MET A . n A 1 239 GLY 239 237 237 GLY GLY A . n A 1 240 VAL 240 238 238 VAL VAL A . n A 1 241 CYS 241 239 239 CYS CYS A . n A 1 242 GLN 242 240 240 GLN GLN A . n A 1 243 LEU 243 241 241 LEU LEU A . n A 1 244 PRO 244 242 242 PRO PRO A . n A 1 245 SER 245 243 243 SER SER A . n A 1 246 LYS 246 244 244 LYS LYS A . n A 1 247 ASN 247 245 245 ASN ASN A . n A 1 248 ASP 248 246 246 ASP ASP A . n A 1 249 GLU 249 247 247 GLU GLU A . n A 1 250 LYS 250 248 248 LYS LYS A . n A 1 251 GLU 251 249 249 GLU GLU A . n A 1 252 TYR 252 250 250 TYR TYR A . n A 1 253 PRO 253 251 251 PRO PRO A . n A 1 254 HIS 254 252 252 HIS HIS A . n A 1 255 ARG 255 253 253 ARG ARG A . n A 1 256 ARG 256 254 254 ARG ARG A . n A 1 257 ILE 257 255 255 ILE ILE A . n A 1 258 ASP 258 256 256 ASP ASP A . n A 1 259 ILE 259 257 257 ILE ILE A . n A 1 260 ARG 260 258 258 ARG ARG A . n A 1 261 LEU 261 259 259 LEU LEU A . n A 1 262 ILE 262 260 260 ILE ILE A . n A 1 263 PRO 263 261 261 PRO PRO A . n A 1 264 LYS 264 262 262 LYS LYS A . n A 1 265 ASP 265 263 263 ASP ASP A . n A 1 266 GLN 266 264 264 GLN GLN A . n A 1 267 TYR 267 265 265 TYR TYR A . n A 1 268 TYR 268 266 266 TYR TYR A . n A 1 269 CYS 269 267 267 CYS CYS A . n A 1 270 GLY 270 268 268 GLY GLY A . n A 1 271 VAL 271 269 269 VAL VAL A . n A 1 272 LEU 272 270 270 LEU LEU A . n A 1 273 TYR 273 271 271 TYR TYR A . n A 1 274 PHE 274 272 272 PHE PHE A . n A 1 275 THR 275 273 273 THR THR A . n A 1 276 GLY 276 274 274 GLY GLY A . n A 1 277 SER 277 275 275 SER SER A . n A 1 278 ASP 278 276 276 ASP ASP A . n A 1 279 ILE 279 277 277 ILE ILE A . n A 1 280 PHE 280 278 278 PHE PHE A . n A 1 281 ASN 281 279 279 ASN ASN A . n A 1 282 LYS 282 280 280 LYS LYS A . n A 1 283 ASN 283 281 281 ASN ASN A . n A 1 284 MET 284 282 282 MET MET A . n A 1 285 ARG 285 283 283 ARG ARG A . n A 1 286 ALA 286 284 284 ALA ALA A . n A 1 287 HIS 287 285 285 HIS HIS A . n A 1 288 ALA 288 286 286 ALA ALA A . n A 1 289 LEU 289 287 287 LEU LEU A . n A 1 290 GLU 290 288 288 GLU GLU A . n A 1 291 LYS 291 289 289 LYS LYS A . n A 1 292 GLY 292 290 290 GLY GLY A . n A 1 293 PHE 293 291 291 PHE PHE A . n A 1 294 THR 294 292 292 THR THR A . n A 1 295 ILE 295 293 293 ILE ILE A . n A 1 296 ASN 296 294 294 ASN ASN A . n A 1 297 GLU 297 295 295 GLU GLU A . n A 1 298 TYR 298 296 296 TYR TYR A . n A 1 299 THR 299 297 297 THR THR A . n A 1 300 ILE 300 298 298 ILE ILE A . n A 1 301 ARG 301 299 299 ARG ARG A . n A 1 302 PRO 302 300 300 PRO PRO A . n A 1 303 LEU 303 301 301 LEU LEU A . n A 1 304 GLY 304 302 302 GLY GLY A . n A 1 305 VAL 305 303 303 VAL VAL A . n A 1 306 THR 306 304 304 THR THR A . n A 1 307 GLY 307 305 305 GLY GLY A . n A 1 308 VAL 308 306 306 VAL VAL A . n A 1 309 ALA 309 307 307 ALA ALA A . n A 1 310 GLY 310 308 308 GLY GLY A . n A 1 311 GLU 311 309 309 GLU GLU A . n A 1 312 PRO 312 310 310 PRO PRO A . n A 1 313 LEU 313 311 311 LEU LEU A . n A 1 314 PRO 314 312 312 PRO PRO A . n A 1 315 VAL 315 313 313 VAL VAL A . n A 1 316 ASP 316 314 314 ASP ASP A . n A 1 317 SER 317 315 315 SER SER A . n A 1 318 GLU 318 316 316 GLU GLU A . n A 1 319 LYS 319 317 317 LYS LYS A . n A 1 320 ASP 320 318 318 ASP ASP A . n A 1 321 ILE 321 319 319 ILE ILE A . n A 1 322 PHE 322 320 320 PHE PHE A . n A 1 323 ASP 323 321 321 ASP ASP A . n A 1 324 TYR 324 322 322 TYR TYR A . n A 1 325 ILE 325 323 323 ILE ILE A . n A 1 326 GLN 326 324 324 GLN GLN A . n A 1 327 TRP 327 325 325 TRP TRP A . n A 1 328 LYS 328 326 326 LYS LYS A . n A 1 329 TYR 329 327 327 TYR TYR A . n A 1 330 ARG 330 328 328 ARG ARG A . n A 1 331 GLU 331 329 329 GLU GLU A . n A 1 332 PRO 332 330 330 PRO PRO A . n A 1 333 LYS 333 331 331 LYS LYS A . n A 1 334 ASP 334 332 332 ASP ASP A . n A 1 335 ARG 335 333 333 ARG ARG A . n A 1 336 SER 336 334 334 SER SER A . n A 1 337 GLU 337 335 335 GLU GLU A . n A 1 338 HIS 338 336 ? ? ? A . n A 1 339 HIS 339 337 ? ? ? A . n A 1 340 HIS 340 338 ? ? ? A . n A 1 341 HIS 341 339 ? ? ? A . n A 1 342 HIS 342 340 ? ? ? A . n A 1 343 HIS 343 341 ? ? ? A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DC 10 10 10 DC DC P . n C 3 11 DA 11 11 11 DA DA P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 8OG 6 6 6 8OG 8OG T . n D 4 7 DG 7 7 7 DG DG T . n D 4 8 DC 8 8 8 DC DC T . n D 4 9 DG 9 9 9 DG DG T . n D 4 10 DC 10 10 10 DC DC T . n D 4 11 DA 11 11 11 DA DA T . n D 4 12 DT 12 12 12 DT DT T . n D 4 13 DC 13 13 13 DC DC T . n D 4 14 DA 14 14 14 DA DA T . n D 4 15 DG 15 15 15 DG DG T . n D 4 16 DC 16 16 16 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 PPV 1 401 1 PPV PPV A . F 6 MG 1 402 2 MG MG A . G 7 NA 1 403 3 NA NA A . H 7 NA 1 404 6 NA NA A . I 7 NA 1 405 7 NA NA A . J 8 ACT 1 406 8 ACT ACT A . K 6 MG 1 101 4 MG MG P . L 9 HOH 1 501 1 HOH HOH A . L 9 HOH 2 502 2 HOH HOH A . L 9 HOH 3 503 3 HOH HOH A . L 9 HOH 4 504 4 HOH HOH A . L 9 HOH 5 505 5 HOH HOH A . L 9 HOH 6 506 6 HOH HOH A . L 9 HOH 7 507 7 HOH HOH A . L 9 HOH 8 508 8 HOH HOH A . L 9 HOH 9 509 9 HOH HOH A . L 9 HOH 10 510 10 HOH HOH A . L 9 HOH 11 511 12 HOH HOH A . L 9 HOH 12 512 13 HOH HOH A . L 9 HOH 13 513 14 HOH HOH A . L 9 HOH 14 514 15 HOH HOH A . L 9 HOH 15 515 16 HOH HOH A . L 9 HOH 16 516 17 HOH HOH A . L 9 HOH 17 517 19 HOH HOH A . L 9 HOH 18 518 20 HOH HOH A . L 9 HOH 19 519 21 HOH HOH A . L 9 HOH 20 520 22 HOH HOH A . L 9 HOH 21 521 23 HOH HOH A . L 9 HOH 22 522 24 HOH HOH A . L 9 HOH 23 523 25 HOH HOH A . L 9 HOH 24 524 26 HOH HOH A . L 9 HOH 25 525 27 HOH HOH A . L 9 HOH 26 526 28 HOH HOH A . L 9 HOH 27 527 29 HOH HOH A . L 9 HOH 28 528 31 HOH HOH A . L 9 HOH 29 529 32 HOH HOH A . L 9 HOH 30 530 34 HOH HOH A . L 9 HOH 31 531 35 HOH HOH A . L 9 HOH 32 532 38 HOH HOH A . L 9 HOH 33 533 40 HOH HOH A . L 9 HOH 34 534 41 HOH HOH A . L 9 HOH 35 535 42 HOH HOH A . L 9 HOH 36 536 43 HOH HOH A . L 9 HOH 37 537 47 HOH HOH A . L 9 HOH 38 538 48 HOH HOH A . L 9 HOH 39 539 49 HOH HOH A . L 9 HOH 40 540 51 HOH HOH A . L 9 HOH 41 541 52 HOH HOH A . L 9 HOH 42 542 54 HOH HOH A . L 9 HOH 43 543 55 HOH HOH A . L 9 HOH 44 544 56 HOH HOH A . L 9 HOH 45 545 57 HOH HOH A . L 9 HOH 46 546 58 HOH HOH A . L 9 HOH 47 547 60 HOH HOH A . L 9 HOH 48 548 61 HOH HOH A . L 9 HOH 49 549 62 HOH HOH A . L 9 HOH 50 550 63 HOH HOH A . L 9 HOH 51 551 64 HOH HOH A . L 9 HOH 52 552 65 HOH HOH A . L 9 HOH 53 553 67 HOH HOH A . L 9 HOH 54 554 72 HOH HOH A . M 9 HOH 1 201 11 HOH HOH P . M 9 HOH 2 202 33 HOH HOH P . M 9 HOH 3 203 37 HOH HOH P . M 9 HOH 4 204 44 HOH HOH P . M 9 HOH 5 205 45 HOH HOH P . M 9 HOH 6 206 59 HOH HOH P . M 9 HOH 7 207 73 HOH HOH P . N 9 HOH 1 101 18 HOH HOH T . N 9 HOH 2 102 30 HOH HOH T . N 9 HOH 3 103 36 HOH HOH T . N 9 HOH 4 104 39 HOH HOH T . N 9 HOH 5 105 50 HOH HOH T . N 9 HOH 6 106 53 HOH HOH T . N 9 HOH 7 107 68 HOH HOH T . N 9 HOH 8 108 69 HOH HOH T . N 9 HOH 9 109 70 HOH HOH T . N 9 HOH 10 110 71 HOH HOH T . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 REFMAC refinement 5.8.0073 ? 2 MOSFLM 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 4RQ6 _cell.length_a 50.410 _cell.length_b 80.450 _cell.length_c 55.680 _cell.angle_alpha 90.00 _cell.angle_beta 107.75 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RQ6 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4RQ6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_percent_sol 43.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '50 MM IMIDAZOLE, 350 MM SODIUM Acetate, 17% PEG3350, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 193 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.pdbx_collection_date 2014-07-23 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 # _reflns.entry_id 4RQ6 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 44.28 _reflns.d_resolution_high 2.25 _reflns.number_obs 19914 _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.number_all ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.32 _reflns_shell.percent_possible_all 98.0 _reflns_shell.Rmerge_I_obs 0.542 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 6458 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4RQ6 _refine.ls_number_reflns_obs 18900 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.28 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 98.53 _refine.ls_R_factor_obs 0.20040 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19766 _refine.ls_R_factor_R_free 0.25204 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 991 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.918 _refine.B_iso_mean 44.391 _refine.aniso_B[1][1] 0.06 _refine.aniso_B[2][2] 0.09 _refine.aniso_B[3][3] -0.11 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.04 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.360 _refine.pdbx_overall_ESU_R_Free 0.245 _refine.overall_SU_ML 0.208 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 8.884 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2613 _refine_hist.pdbx_number_atoms_nucleic_acid 654 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 71 _refine_hist.number_atoms_total 3356 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 44.28 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.018 ? 3442 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 2978 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.232 1.799 ? 4753 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.846 3.000 ? 6903 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5.433 5.000 ? 329 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 36.648 24.127 ? 126 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 14.409 15.000 ? 516 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15.541 15.000 ? 19 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.062 0.200 ? 489 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 3400 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 772 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 2.156 4.149 ? 1314 ? 'X-RAY DIFFRACTION' r_mcbond_other 2.147 4.145 ? 1312 ? 'X-RAY DIFFRACTION' r_mcangle_it 3.500 6.211 ? 1643 ? 'X-RAY DIFFRACTION' r_mcangle_other 3.502 6.213 ? 1644 ? 'X-RAY DIFFRACTION' r_scbond_it 2.698 4.692 ? 2128 ? 'X-RAY DIFFRACTION' r_scbond_other 2.698 4.692 ? 2127 ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other 4.489 6.988 ? 3110 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 6.600 36.639 ? 4092 ? 'X-RAY DIFFRACTION' r_long_range_B_other 6.597 36.648 ? 4084 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.250 _refine_ls_shell.d_res_low 2.308 _refine_ls_shell.number_reflns_R_work 1393 _refine_ls_shell.R_factor_R_work 0.307 _refine_ls_shell.percent_reflns_obs 97.80 _refine_ls_shell.R_factor_R_free 0.370 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4RQ6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4RQ6 _struct.title 'Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine(8-oxoG) and dATP soaked with MgCl2 for 80 s' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RQ6 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'X-family, pol beta, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 7 ? J N N 8 ? K N N 6 ? L N N 9 ? M N N 9 ? N N N 9 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 4RQ6 4RQ6 2 ? ? ? 3 PDB 4RQ6 4RQ6 3 ? ? ? 4 PDB 4RQ6 4RQ6 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RQ6 A 3 ? 337 ? P06746 1 ? 335 ? 1 335 2 2 4RQ6 D 1 ? 5 ? 4RQ6 1 ? 5 ? 1 5 3 3 4RQ6 P 1 ? 11 ? 4RQ6 1 ? 11 ? 1 11 4 4 4RQ6 T 1 ? 16 ? 4RQ6 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RQ6 MET A 1 ? UNP P06746 ? ? 'expression tag' -1 1 1 4RQ6 GLY A 2 ? UNP P06746 ? ? 'expression tag' 0 2 1 4RQ6 HIS A 338 ? UNP P06746 ? ? 'expression tag' 336 3 1 4RQ6 HIS A 339 ? UNP P06746 ? ? 'expression tag' 337 4 1 4RQ6 HIS A 340 ? UNP P06746 ? ? 'expression tag' 338 5 1 4RQ6 HIS A 341 ? UNP P06746 ? ? 'expression tag' 339 6 1 4RQ6 HIS A 342 ? UNP P06746 ? ? 'expression tag' 340 7 1 4RQ6 HIS A 343 ? UNP P06746 ? ? 'expression tag' 341 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6510 ? 1 MORE -91 ? 1 'SSA (A^2)' 19910 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? VAL A 31 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 34 ? TYR A 51 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 SER A 57 ? LYS A 63 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 68 ? GLY A 82 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 84 ? ASP A 93 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP A 93 ? ARG A 104 ? ASP A 91 ARG A 102 1 ? 12 HELX_P HELX_P7 7 GLY A 109 ? GLU A 119 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 123 ? LYS A 129 ? THR A 121 LYS A 127 1 ? 7 HELX_P HELX_P9 9 ASN A 130 ? LEU A 134 ? ASN A 128 LEU A 132 5 ? 5 HELX_P HELX_P10 10 ASN A 135 ? TYR A 144 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 144 ? GLU A 149 ? TYR A 142 GLU A 147 1 ? 6 HELX_P HELX_P12 12 ARG A 154 ? ASP A 172 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 CYS A 180 ? ARG A 185 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 LYS A 211 ? VAL A 223 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO A 263 ? ASP A 265 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 266 ? GLY A 276 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 277 ? LYS A 291 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 18 SER A 317 ? ILE A 325 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU A 331 ? SER A 336 ? GLU A 329 SER A 334 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D DC 5 "O3'" ? ? ? 1_555 D 8OG 6 P ? ? T DC 5 T 8OG 6 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale both ? D 8OG 6 "O3'" ? ? ? 1_555 D DG 7 P ? ? T 8OG 6 T DG 7 1_555 ? ? ? ? ? ? ? 1.582 ? ? metalc1 metalc ? ? A LYS 62 O ? ? ? 1_555 H NA . NA ? ? A LYS 60 A NA 404 1_555 ? ? ? ? ? ? ? 2.358 ? ? metalc2 metalc ? ? A LEU 64 O ? ? ? 1_555 H NA . NA ? ? A LEU 62 A NA 404 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc3 metalc ? ? A VAL 67 O ? ? ? 1_555 H NA . NA ? ? A VAL 65 A NA 404 1_555 ? ? ? ? ? ? ? 2.681 ? ? metalc4 metalc ? ? A THR 103 O ? ? ? 1_555 I NA . NA ? ? A THR 101 A NA 405 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc5 metalc ? ? A VAL 105 O ? ? ? 1_555 I NA . NA ? ? A VAL 103 A NA 405 1_555 ? ? ? ? ? ? ? 2.598 ? ? metalc6 metalc ? ? A ILE 108 O ? ? ? 1_555 I NA . NA ? ? A ILE 106 A NA 405 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc7 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 190 A MG 402 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc8 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 G NA . NA ? ? A ASP 190 A NA 403 1_555 ? ? ? ? ? ? ? 2.219 ? ? metalc9 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 G NA . NA ? ? A ASP 190 A NA 403 1_555 ? ? ? ? ? ? ? 3.032 ? ? metalc10 metalc ? ? A ASP 194 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 192 A MG 402 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc11 metalc ? ? A ASP 194 OD1 ? ? ? 1_555 G NA . NA ? ? A ASP 192 A NA 403 1_555 ? ? ? ? ? ? ? 2.218 ? ? metalc12 metalc ? ? A ASP 258 OD2 ? ? ? 1_555 G NA . NA ? ? A ASP 256 A NA 403 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc13 metalc ? ? E PPV . O32 ? ? ? 1_555 F MG . MG ? ? A PPV 401 A MG 402 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc14 metalc ? ? E PPV . O21 ? ? ? 1_555 F MG . MG ? ? A PPV 401 A MG 402 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc15 metalc ? ? E PPV . O12 ? ? ? 1_555 K MG . MG ? ? A PPV 401 P MG 101 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc16 metalc ? ? F MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 402 A HOH 505 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc17 metalc ? ? F MG . MG ? ? ? 1_555 C DA 11 OP1 ? ? A MG 402 P DA 11 1_555 ? ? ? ? ? ? ? 2.154 ? ? metalc18 metalc ? ? G NA . NA ? ? ? 1_555 C DC 10 "O3'" ? ? A NA 403 P DC 10 1_555 ? ? ? ? ? ? ? 2.457 ? ? metalc19 metalc ? ? G NA . NA ? ? ? 1_555 C DA 11 OP1 ? ? A NA 403 P DA 11 1_555 ? ? ? ? ? ? ? 2.253 ? ? metalc20 metalc ? ? H NA . NA ? ? ? 1_555 B DC 3 OP1 ? ? A NA 404 D DC 3 1_555 ? ? ? ? ? ? ? 2.475 ? ? metalc21 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 405 A HOH 529 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc22 metalc ? ? I NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 405 P DG 9 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc23 metalc ? ? I NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 405 P HOH 201 1_555 ? ? ? ? ? ? ? 2.601 ? ? metalc24 metalc ? ? L HOH . O ? ? ? 1_555 K MG . MG ? ? A HOH 525 P MG 101 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc25 metalc ? ? L HOH . O ? ? ? 1_555 K MG . MG ? ? A HOH 554 P MG 101 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc26 metalc ? ? C DA 11 OP2 ? ? ? 1_555 K MG . MG ? ? P DA 11 P MG 101 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc27 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? P MG 101 P HOH 205 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc28 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? P MG 101 P HOH 207 1_555 ? ? ? ? ? ? ? 2.173 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 4 T DC 1 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog10 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 5 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 16 N3 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 16 O2 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 15 N1 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 15 O6 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 15 N2 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 13 N3 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 13 O2 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 13 N4 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 10 N3 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 10 O2 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 10 N4 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 7 N1 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 7 O6 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 7 N2 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D 8OG 6 O6 ? ? P DA 11 T 8OG 6 1_555 ? ? ? ? ? ? 'DA-8OG MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A LEU 64 ? A LEU 62 ? 1_555 85.9 ? 2 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 81.4 ? 3 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 67 ? A VAL 65 ? 1_555 92.4 ? 4 O ? A LYS 62 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 173.3 ? 5 O ? A LEU 64 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 95.4 ? 6 O ? A VAL 67 ? A VAL 65 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 91.9 ? 7 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A VAL 105 ? A VAL 103 ? 1_555 85.9 ? 8 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 86.8 ? 9 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 108 ? A ILE 106 ? 1_555 80.5 ? 10 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 529 ? 1_555 76.9 ? 11 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 529 ? 1_555 161.1 ? 12 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? A HOH 529 ? 1_555 90.6 ? 13 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 175.6 ? 14 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 92.0 ? 15 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 96.6 ? 16 O ? L HOH . ? A HOH 529 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 105.7 ? 17 O ? A THR 103 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? M HOH . ? P HOH 201 ? 1_555 91.4 ? 18 O ? A VAL 105 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? M HOH . ? P HOH 201 ? 1_555 88.7 ? 19 O ? A ILE 108 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? M HOH . ? P HOH 201 ? 1_555 169.2 ? 20 O ? L HOH . ? A HOH 529 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? M HOH . ? P HOH 201 ? 1_555 99.4 ? 21 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? M HOH . ? P HOH 201 ? 1_555 84.7 ? 22 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 99.3 ? 23 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O32 ? E PPV . ? A PPV 401 ? 1_555 170.0 ? 24 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O32 ? E PPV . ? A PPV 401 ? 1_555 90.7 ? 25 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O21 ? E PPV . ? A PPV 401 ? 1_555 90.0 ? 26 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O21 ? E PPV . ? A PPV 401 ? 1_555 167.7 ? 27 O32 ? E PPV . ? A PPV 401 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O21 ? E PPV . ? A PPV 401 ? 1_555 80.1 ? 28 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 505 ? 1_555 91.3 ? 29 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 505 ? 1_555 87.7 ? 30 O32 ? E PPV . ? A PPV 401 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 505 ? 1_555 89.3 ? 31 O21 ? E PPV . ? A PPV 401 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 O ? L HOH . ? A HOH 505 ? 1_555 84.1 ? 32 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 89.0 ? 33 OD2 ? A ASP 194 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 77.3 ? 34 O32 ? E PPV . ? A PPV 401 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 93.0 ? 35 O21 ? E PPV . ? A PPV 401 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 111.1 ? 36 O ? L HOH . ? A HOH 505 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 164.9 ? 37 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 45.9 ? 38 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 121.5 ? 39 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 92.0 ? 40 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 95.9 ? 41 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 137.5 ? 42 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 96.4 ? 43 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 134.1 ? 44 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 128.9 ? 45 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 103.0 ? 46 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 89.4 ? 47 OD2 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 102.8 ? 48 OD1 ? A ASP 192 ? A ASP 190 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 68.1 ? 49 OD1 ? A ASP 194 ? A ASP 192 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 90.6 ? 50 OD2 ? A ASP 258 ? A ASP 256 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 152.8 ? 51 "O3'" ? C DC 10 ? P DC 10 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DA 11 ? P DA 11 ? 1_555 63.4 ? 52 O12 ? E PPV . ? A PPV 401 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 525 ? 1_555 73.1 ? 53 O12 ? E PPV . ? A PPV 401 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 554 ? 1_555 91.5 ? 54 O ? L HOH . ? A HOH 525 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 554 ? 1_555 81.3 ? 55 O12 ? E PPV . ? A PPV 401 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 OP2 ? C DA 11 ? P DA 11 ? 1_555 81.7 ? 56 O ? L HOH . ? A HOH 525 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 OP2 ? C DA 11 ? P DA 11 ? 1_555 79.7 ? 57 O ? L HOH . ? A HOH 554 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 OP2 ? C DA 11 ? P DA 11 ? 1_555 160.9 ? 58 O12 ? E PPV . ? A PPV 401 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 205 ? 1_555 102.6 ? 59 O ? L HOH . ? A HOH 525 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 205 ? 1_555 167.9 ? 60 O ? L HOH . ? A HOH 554 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 205 ? 1_555 110.4 ? 61 OP2 ? C DA 11 ? P DA 11 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 205 ? 1_555 88.5 ? 62 O12 ? E PPV . ? A PPV 401 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 207 ? 1_555 150.1 ? 63 O ? L HOH . ? A HOH 525 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 207 ? 1_555 79.1 ? 64 O ? L HOH . ? A HOH 554 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 207 ? 1_555 73.2 ? 65 OP2 ? C DA 11 ? P DA 11 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 207 ? 1_555 104.3 ? 66 O ? M HOH . ? P HOH 205 ? 1_555 MG ? K MG . ? P MG 101 ? 1_555 O ? M HOH . ? P HOH 207 ? 1_555 106.8 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 276 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 277 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 152 ? PRO A 153 ? ILE A 150 PRO A 151 A 2 SER A 189 ? SER A 190 ? SER A 187 SER A 188 B 1 ILE A 176 ? VAL A 179 ? ILE A 174 VAL A 177 B 2 MET A 193 ? THR A 198 ? MET A 191 THR A 196 B 3 ARG A 255 ? LEU A 261 ? ARG A 253 LEU A 259 B 4 LYS A 236 ? CYS A 241 ? LYS A 234 CYS A 239 B 5 ILE A 226 ? LYS A 232 ? ILE A 224 LYS A 230 C 1 PHE A 293 ? ILE A 295 ? PHE A 291 ILE A 293 C 2 ILE A 300 ? PRO A 302 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 152 ? N ILE A 150 O SER A 190 ? O SER A 188 B 1 2 N THR A 178 ? N THR A 176 O LEU A 196 ? O LEU A 194 B 2 3 N VAL A 195 ? N VAL A 193 O ASP A 258 ? O ASP A 256 B 3 4 O ILE A 259 ? O ILE A 257 N PHE A 237 ? N PHE A 235 B 4 5 O MET A 238 ? O MET A 236 N SER A 231 ? N SER A 229 C 1 2 N THR A 294 ? N THR A 292 O ARG A 301 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PPV 401 ? 14 'BINDING SITE FOR RESIDUE PPV A 401' AC2 Software A MG 402 ? 6 'BINDING SITE FOR RESIDUE MG A 402' AC3 Software A NA 403 ? 6 'BINDING SITE FOR RESIDUE NA A 403' AC4 Software A NA 404 ? 4 'BINDING SITE FOR RESIDUE NA A 404' AC5 Software A NA 405 ? 6 'BINDING SITE FOR RESIDUE NA A 405' AC6 Software A ACT 406 ? 3 'BINDING SITE FOR RESIDUE ACT A 406' AC7 Software P MG 101 ? 6 'BINDING SITE FOR RESIDUE MG P 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 ARG A 151 ? ARG A 149 . ? 1_555 ? 2 AC1 14 GLY A 181 ? GLY A 179 . ? 1_555 ? 3 AC1 14 SER A 182 ? SER A 180 . ? 1_555 ? 4 AC1 14 ARG A 185 ? ARG A 183 . ? 1_555 ? 5 AC1 14 GLY A 191 ? GLY A 189 . ? 1_555 ? 6 AC1 14 ASP A 192 ? ASP A 190 . ? 1_555 ? 7 AC1 14 ASP A 194 ? ASP A 192 . ? 1_555 ? 8 AC1 14 MG F . ? MG A 402 . ? 1_555 ? 9 AC1 14 HOH L . ? HOH A 505 . ? 1_555 ? 10 AC1 14 HOH L . ? HOH A 525 . ? 1_555 ? 11 AC1 14 HOH L . ? HOH A 552 . ? 1_555 ? 12 AC1 14 HOH L . ? HOH A 554 . ? 1_555 ? 13 AC1 14 DA C 11 ? DA P 11 . ? 1_555 ? 14 AC1 14 MG K . ? MG P 101 . ? 1_555 ? 15 AC2 6 ASP A 192 ? ASP A 190 . ? 1_555 ? 16 AC2 6 ASP A 194 ? ASP A 192 . ? 1_555 ? 17 AC2 6 PPV E . ? PPV A 401 . ? 1_555 ? 18 AC2 6 NA G . ? NA A 403 . ? 1_555 ? 19 AC2 6 HOH L . ? HOH A 505 . ? 1_555 ? 20 AC2 6 DA C 11 ? DA P 11 . ? 1_555 ? 21 AC3 6 ASP A 192 ? ASP A 190 . ? 1_555 ? 22 AC3 6 ASP A 194 ? ASP A 192 . ? 1_555 ? 23 AC3 6 ASP A 258 ? ASP A 256 . ? 1_555 ? 24 AC3 6 MG F . ? MG A 402 . ? 1_555 ? 25 AC3 6 DC C 10 ? DC P 10 . ? 1_555 ? 26 AC3 6 DA C 11 ? DA P 11 . ? 1_555 ? 27 AC4 4 LYS A 62 ? LYS A 60 . ? 1_555 ? 28 AC4 4 LEU A 64 ? LEU A 62 . ? 1_555 ? 29 AC4 4 VAL A 67 ? VAL A 65 . ? 1_555 ? 30 AC4 4 DC B 3 ? DC D 3 . ? 1_555 ? 31 AC5 6 THR A 103 ? THR A 101 . ? 1_555 ? 32 AC5 6 VAL A 105 ? VAL A 103 . ? 1_555 ? 33 AC5 6 ILE A 108 ? ILE A 106 . ? 1_555 ? 34 AC5 6 HOH L . ? HOH A 529 . ? 1_555 ? 35 AC5 6 DG C 9 ? DG P 9 . ? 1_555 ? 36 AC5 6 HOH M . ? HOH P 201 . ? 1_555 ? 37 AC6 3 ARG A 151 ? ARG A 149 . ? 1_555 ? 38 AC6 3 GLU A 156 ? GLU A 154 . ? 1_555 ? 39 AC6 3 ARG A 255 ? ARG A 253 . ? 1_555 ? 40 AC7 6 PPV E . ? PPV A 401 . ? 1_555 ? 41 AC7 6 HOH L . ? HOH A 525 . ? 1_555 ? 42 AC7 6 HOH L . ? HOH A 554 . ? 1_555 ? 43 AC7 6 DA C 11 ? DA P 11 . ? 1_555 ? 44 AC7 6 HOH M . ? HOH P 205 . ? 1_555 ? 45 AC7 6 HOH M . ? HOH P 207 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.488 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.119 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 32 ? ? -114.77 78.16 2 1 CYS A 178 ? ? -114.03 -135.55 3 1 ASP A 246 ? ? 75.16 -6.37 4 1 ASN A 294 ? ? -125.05 -165.57 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id D _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id T _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A GLY 0 ? A GLY 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A SER 2 ? A SER 4 5 1 Y 1 A LYS 3 ? A LYS 5 6 1 Y 1 A ARG 4 ? A ARG 6 7 1 Y 1 A LYS 5 ? A LYS 7 8 1 Y 1 A ALA 6 ? A ALA 8 9 1 Y 1 A PRO 7 ? A PRO 9 10 1 Y 1 A GLN 8 ? A GLN 10 11 1 Y 1 A GLU 9 ? A GLU 11 12 1 Y 1 A HIS 336 ? A HIS 338 13 1 Y 1 A HIS 337 ? A HIS 339 14 1 Y 1 A HIS 338 ? A HIS 340 15 1 Y 1 A HIS 339 ? A HIS 341 16 1 Y 1 A HIS 340 ? A HIS 342 17 1 Y 1 A HIS 341 ? A HIS 343 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ACT C C N N 39 ACT O O N N 40 ACT OXT O N N 41 ACT CH3 C N N 42 ACT H1 H N N 43 ACT H2 H N N 44 ACT H3 H N N 45 ALA N N N N 46 ALA CA C N S 47 ALA C C N N 48 ALA O O N N 49 ALA CB C N N 50 ALA OXT O N N 51 ALA H H N N 52 ALA H2 H N N 53 ALA HA H N N 54 ALA HB1 H N N 55 ALA HB2 H N N 56 ALA HB3 H N N 57 ALA HXT H N N 58 ARG N N N N 59 ARG CA C N S 60 ARG C C N N 61 ARG O O N N 62 ARG CB C N N 63 ARG CG C N N 64 ARG CD C N N 65 ARG NE N N N 66 ARG CZ C N N 67 ARG NH1 N N N 68 ARG NH2 N N N 69 ARG OXT O N N 70 ARG H H N N 71 ARG H2 H N N 72 ARG HA H N N 73 ARG HB2 H N N 74 ARG HB3 H N N 75 ARG HG2 H N N 76 ARG HG3 H N N 77 ARG HD2 H N N 78 ARG HD3 H N N 79 ARG HE H N N 80 ARG HH11 H N N 81 ARG HH12 H N N 82 ARG HH21 H N N 83 ARG HH22 H N N 84 ARG HXT H N N 85 ASN N N N N 86 ASN CA C N S 87 ASN C C N N 88 ASN O O N N 89 ASN CB C N N 90 ASN CG C N N 91 ASN OD1 O N N 92 ASN ND2 N N N 93 ASN OXT O N N 94 ASN H H N N 95 ASN H2 H N N 96 ASN HA H N N 97 ASN HB2 H N N 98 ASN HB3 H N N 99 ASN HD21 H N N 100 ASN HD22 H N N 101 ASN HXT H N N 102 ASP N N N N 103 ASP CA C N S 104 ASP C C N N 105 ASP O O N N 106 ASP CB C N N 107 ASP CG C N N 108 ASP OD1 O N N 109 ASP OD2 O N N 110 ASP OXT O N N 111 ASP H H N N 112 ASP H2 H N N 113 ASP HA H N N 114 ASP HB2 H N N 115 ASP HB3 H N N 116 ASP HD2 H N N 117 ASP HXT H N N 118 CYS N N N N 119 CYS CA C N R 120 CYS C C N N 121 CYS O O N N 122 CYS CB C N N 123 CYS SG S N N 124 CYS OXT O N N 125 CYS H H N N 126 CYS H2 H N N 127 CYS HA H N N 128 CYS HB2 H N N 129 CYS HB3 H N N 130 CYS HG H N N 131 CYS HXT H N N 132 DA OP3 O N N 133 DA P P N N 134 DA OP1 O N N 135 DA OP2 O N N 136 DA "O5'" O N N 137 DA "C5'" C N N 138 DA "C4'" C N R 139 DA "O4'" O N N 140 DA "C3'" C N S 141 DA "O3'" O N N 142 DA "C2'" C N N 143 DA "C1'" C N R 144 DA N9 N Y N 145 DA C8 C Y N 146 DA N7 N Y N 147 DA C5 C Y N 148 DA C6 C Y N 149 DA N6 N N N 150 DA N1 N Y N 151 DA C2 C Y N 152 DA N3 N Y N 153 DA C4 C Y N 154 DA HOP3 H N N 155 DA HOP2 H N N 156 DA "H5'" H N N 157 DA "H5''" H N N 158 DA "H4'" H N N 159 DA "H3'" H N N 160 DA "HO3'" H N N 161 DA "H2'" H N N 162 DA "H2''" H N N 163 DA "H1'" H N N 164 DA H8 H N N 165 DA H61 H N N 166 DA H62 H N N 167 DA H2 H N N 168 DC OP3 O N N 169 DC P P N N 170 DC OP1 O N N 171 DC OP2 O N N 172 DC "O5'" O N N 173 DC "C5'" C N N 174 DC "C4'" C N R 175 DC "O4'" O N N 176 DC "C3'" C N S 177 DC "O3'" O N N 178 DC "C2'" C N N 179 DC "C1'" C N R 180 DC N1 N N N 181 DC C2 C N N 182 DC O2 O N N 183 DC N3 N N N 184 DC C4 C N N 185 DC N4 N N N 186 DC C5 C N N 187 DC C6 C N N 188 DC HOP3 H N N 189 DC HOP2 H N N 190 DC "H5'" H N N 191 DC "H5''" H N N 192 DC "H4'" H N N 193 DC "H3'" H N N 194 DC "HO3'" H N N 195 DC "H2'" H N N 196 DC "H2''" H N N 197 DC "H1'" H N N 198 DC H41 H N N 199 DC H42 H N N 200 DC H5 H N N 201 DC H6 H N N 202 DG OP3 O N N 203 DG P P N N 204 DG OP1 O N N 205 DG OP2 O N N 206 DG "O5'" O N N 207 DG "C5'" C N N 208 DG "C4'" C N R 209 DG "O4'" O N N 210 DG "C3'" C N S 211 DG "O3'" O N N 212 DG "C2'" C N N 213 DG "C1'" C N R 214 DG N9 N Y N 215 DG C8 C Y N 216 DG N7 N Y N 217 DG C5 C Y N 218 DG C6 C N N 219 DG O6 O N N 220 DG N1 N N N 221 DG C2 C N N 222 DG N2 N N N 223 DG N3 N N N 224 DG C4 C Y N 225 DG HOP3 H N N 226 DG HOP2 H N N 227 DG "H5'" H N N 228 DG "H5''" H N N 229 DG "H4'" H N N 230 DG "H3'" H N N 231 DG "HO3'" H N N 232 DG "H2'" H N N 233 DG "H2''" H N N 234 DG "H1'" H N N 235 DG H8 H N N 236 DG H1 H N N 237 DG H21 H N N 238 DG H22 H N N 239 DT OP3 O N N 240 DT P P N N 241 DT OP1 O N N 242 DT OP2 O N N 243 DT "O5'" O N N 244 DT "C5'" C N N 245 DT "C4'" C N R 246 DT "O4'" O N N 247 DT "C3'" C N S 248 DT "O3'" O N N 249 DT "C2'" C N N 250 DT "C1'" C N R 251 DT N1 N N N 252 DT C2 C N N 253 DT O2 O N N 254 DT N3 N N N 255 DT C4 C N N 256 DT O4 O N N 257 DT C5 C N N 258 DT C7 C N N 259 DT C6 C N N 260 DT HOP3 H N N 261 DT HOP2 H N N 262 DT "H5'" H N N 263 DT "H5''" H N N 264 DT "H4'" H N N 265 DT "H3'" H N N 266 DT "HO3'" H N N 267 DT "H2'" H N N 268 DT "H2''" H N N 269 DT "H1'" H N N 270 DT H3 H N N 271 DT H71 H N N 272 DT H72 H N N 273 DT H73 H N N 274 DT H6 H N N 275 GLN N N N N 276 GLN CA C N S 277 GLN C C N N 278 GLN O O N N 279 GLN CB C N N 280 GLN CG C N N 281 GLN CD C N N 282 GLN OE1 O N N 283 GLN NE2 N N N 284 GLN OXT O N N 285 GLN H H N N 286 GLN H2 H N N 287 GLN HA H N N 288 GLN HB2 H N N 289 GLN HB3 H N N 290 GLN HG2 H N N 291 GLN HG3 H N N 292 GLN HE21 H N N 293 GLN HE22 H N N 294 GLN HXT H N N 295 GLU N N N N 296 GLU CA C N S 297 GLU C C N N 298 GLU O O N N 299 GLU CB C N N 300 GLU CG C N N 301 GLU CD C N N 302 GLU OE1 O N N 303 GLU OE2 O N N 304 GLU OXT O N N 305 GLU H H N N 306 GLU H2 H N N 307 GLU HA H N N 308 GLU HB2 H N N 309 GLU HB3 H N N 310 GLU HG2 H N N 311 GLU HG3 H N N 312 GLU HE2 H N N 313 GLU HXT H N N 314 GLY N N N N 315 GLY CA C N N 316 GLY C C N N 317 GLY O O N N 318 GLY OXT O N N 319 GLY H H N N 320 GLY H2 H N N 321 GLY HA2 H N N 322 GLY HA3 H N N 323 GLY HXT H N N 324 HIS N N N N 325 HIS CA C N S 326 HIS C C N N 327 HIS O O N N 328 HIS CB C N N 329 HIS CG C Y N 330 HIS ND1 N Y N 331 HIS CD2 C Y N 332 HIS CE1 C Y N 333 HIS NE2 N Y N 334 HIS OXT O N N 335 HIS H H N N 336 HIS H2 H N N 337 HIS HA H N N 338 HIS HB2 H N N 339 HIS HB3 H N N 340 HIS HD1 H N N 341 HIS HD2 H N N 342 HIS HE1 H N N 343 HIS HE2 H N N 344 HIS HXT H N N 345 HOH O O N N 346 HOH H1 H N N 347 HOH H2 H N N 348 ILE N N N N 349 ILE CA C N S 350 ILE C C N N 351 ILE O O N N 352 ILE CB C N S 353 ILE CG1 C N N 354 ILE CG2 C N N 355 ILE CD1 C N N 356 ILE OXT O N N 357 ILE H H N N 358 ILE H2 H N N 359 ILE HA H N N 360 ILE HB H N N 361 ILE HG12 H N N 362 ILE HG13 H N N 363 ILE HG21 H N N 364 ILE HG22 H N N 365 ILE HG23 H N N 366 ILE HD11 H N N 367 ILE HD12 H N N 368 ILE HD13 H N N 369 ILE HXT H N N 370 LEU N N N N 371 LEU CA C N S 372 LEU C C N N 373 LEU O O N N 374 LEU CB C N N 375 LEU CG C N N 376 LEU CD1 C N N 377 LEU CD2 C N N 378 LEU OXT O N N 379 LEU H H N N 380 LEU H2 H N N 381 LEU HA H N N 382 LEU HB2 H N N 383 LEU HB3 H N N 384 LEU HG H N N 385 LEU HD11 H N N 386 LEU HD12 H N N 387 LEU HD13 H N N 388 LEU HD21 H N N 389 LEU HD22 H N N 390 LEU HD23 H N N 391 LEU HXT H N N 392 LYS N N N N 393 LYS CA C N S 394 LYS C C N N 395 LYS O O N N 396 LYS CB C N N 397 LYS CG C N N 398 LYS CD C N N 399 LYS CE C N N 400 LYS NZ N N N 401 LYS OXT O N N 402 LYS H H N N 403 LYS H2 H N N 404 LYS HA H N N 405 LYS HB2 H N N 406 LYS HB3 H N N 407 LYS HG2 H N N 408 LYS HG3 H N N 409 LYS HD2 H N N 410 LYS HD3 H N N 411 LYS HE2 H N N 412 LYS HE3 H N N 413 LYS HZ1 H N N 414 LYS HZ2 H N N 415 LYS HZ3 H N N 416 LYS HXT H N N 417 MET N N N N 418 MET CA C N S 419 MET C C N N 420 MET O O N N 421 MET CB C N N 422 MET CG C N N 423 MET SD S N N 424 MET CE C N N 425 MET OXT O N N 426 MET H H N N 427 MET H2 H N N 428 MET HA H N N 429 MET HB2 H N N 430 MET HB3 H N N 431 MET HG2 H N N 432 MET HG3 H N N 433 MET HE1 H N N 434 MET HE2 H N N 435 MET HE3 H N N 436 MET HXT H N N 437 MG MG MG N N 438 NA NA NA N N 439 PHE N N N N 440 PHE CA C N S 441 PHE C C N N 442 PHE O O N N 443 PHE CB C N N 444 PHE CG C Y N 445 PHE CD1 C Y N 446 PHE CD2 C Y N 447 PHE CE1 C Y N 448 PHE CE2 C Y N 449 PHE CZ C Y N 450 PHE OXT O N N 451 PHE H H N N 452 PHE H2 H N N 453 PHE HA H N N 454 PHE HB2 H N N 455 PHE HB3 H N N 456 PHE HD1 H N N 457 PHE HD2 H N N 458 PHE HE1 H N N 459 PHE HE2 H N N 460 PHE HZ H N N 461 PHE HXT H N N 462 PPV O11 O N N 463 PPV P1 P N N 464 PPV O21 O N N 465 PPV O31 O N N 466 PPV OPP O N N 467 PPV P2 P N N 468 PPV O12 O N N 469 PPV O22 O N N 470 PPV O32 O N N 471 PPV H11 H N N 472 PPV H21 H N N 473 PPV H12 H N N 474 PPV H32 H N N 475 PRO N N N N 476 PRO CA C N S 477 PRO C C N N 478 PRO O O N N 479 PRO CB C N N 480 PRO CG C N N 481 PRO CD C N N 482 PRO OXT O N N 483 PRO H H N N 484 PRO HA H N N 485 PRO HB2 H N N 486 PRO HB3 H N N 487 PRO HG2 H N N 488 PRO HG3 H N N 489 PRO HD2 H N N 490 PRO HD3 H N N 491 PRO HXT H N N 492 SER N N N N 493 SER CA C N S 494 SER C C N N 495 SER O O N N 496 SER CB C N N 497 SER OG O N N 498 SER OXT O N N 499 SER H H N N 500 SER H2 H N N 501 SER HA H N N 502 SER HB2 H N N 503 SER HB3 H N N 504 SER HG H N N 505 SER HXT H N N 506 THR N N N N 507 THR CA C N S 508 THR C C N N 509 THR O O N N 510 THR CB C N R 511 THR OG1 O N N 512 THR CG2 C N N 513 THR OXT O N N 514 THR H H N N 515 THR H2 H N N 516 THR HA H N N 517 THR HB H N N 518 THR HG1 H N N 519 THR HG21 H N N 520 THR HG22 H N N 521 THR HG23 H N N 522 THR HXT H N N 523 TRP N N N N 524 TRP CA C N S 525 TRP C C N N 526 TRP O O N N 527 TRP CB C N N 528 TRP CG C Y N 529 TRP CD1 C Y N 530 TRP CD2 C Y N 531 TRP NE1 N Y N 532 TRP CE2 C Y N 533 TRP CE3 C Y N 534 TRP CZ2 C Y N 535 TRP CZ3 C Y N 536 TRP CH2 C Y N 537 TRP OXT O N N 538 TRP H H N N 539 TRP H2 H N N 540 TRP HA H N N 541 TRP HB2 H N N 542 TRP HB3 H N N 543 TRP HD1 H N N 544 TRP HE1 H N N 545 TRP HE3 H N N 546 TRP HZ2 H N N 547 TRP HZ3 H N N 548 TRP HH2 H N N 549 TRP HXT H N N 550 TYR N N N N 551 TYR CA C N S 552 TYR C C N N 553 TYR O O N N 554 TYR CB C N N 555 TYR CG C Y N 556 TYR CD1 C Y N 557 TYR CD2 C Y N 558 TYR CE1 C Y N 559 TYR CE2 C Y N 560 TYR CZ C Y N 561 TYR OH O N N 562 TYR OXT O N N 563 TYR H H N N 564 TYR H2 H N N 565 TYR HA H N N 566 TYR HB2 H N N 567 TYR HB3 H N N 568 TYR HD1 H N N 569 TYR HD2 H N N 570 TYR HE1 H N N 571 TYR HE2 H N N 572 TYR HH H N N 573 TYR HXT H N N 574 VAL N N N N 575 VAL CA C N S 576 VAL C C N N 577 VAL O O N N 578 VAL CB C N N 579 VAL CG1 C N N 580 VAL CG2 C N N 581 VAL OXT O N N 582 VAL H H N N 583 VAL H2 H N N 584 VAL HA H N N 585 VAL HB H N N 586 VAL HG11 H N N 587 VAL HG12 H N N 588 VAL HG13 H N N 589 VAL HG21 H N N 590 VAL HG22 H N N 591 VAL HG23 H N N 592 VAL HXT H N N 593 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ACT C O doub N N 41 ACT C OXT sing N N 42 ACT C CH3 sing N N 43 ACT CH3 H1 sing N N 44 ACT CH3 H2 sing N N 45 ACT CH3 H3 sing N N 46 ALA N CA sing N N 47 ALA N H sing N N 48 ALA N H2 sing N N 49 ALA CA C sing N N 50 ALA CA CB sing N N 51 ALA CA HA sing N N 52 ALA C O doub N N 53 ALA C OXT sing N N 54 ALA CB HB1 sing N N 55 ALA CB HB2 sing N N 56 ALA CB HB3 sing N N 57 ALA OXT HXT sing N N 58 ARG N CA sing N N 59 ARG N H sing N N 60 ARG N H2 sing N N 61 ARG CA C sing N N 62 ARG CA CB sing N N 63 ARG CA HA sing N N 64 ARG C O doub N N 65 ARG C OXT sing N N 66 ARG CB CG sing N N 67 ARG CB HB2 sing N N 68 ARG CB HB3 sing N N 69 ARG CG CD sing N N 70 ARG CG HG2 sing N N 71 ARG CG HG3 sing N N 72 ARG CD NE sing N N 73 ARG CD HD2 sing N N 74 ARG CD HD3 sing N N 75 ARG NE CZ sing N N 76 ARG NE HE sing N N 77 ARG CZ NH1 sing N N 78 ARG CZ NH2 doub N N 79 ARG NH1 HH11 sing N N 80 ARG NH1 HH12 sing N N 81 ARG NH2 HH21 sing N N 82 ARG NH2 HH22 sing N N 83 ARG OXT HXT sing N N 84 ASN N CA sing N N 85 ASN N H sing N N 86 ASN N H2 sing N N 87 ASN CA C sing N N 88 ASN CA CB sing N N 89 ASN CA HA sing N N 90 ASN C O doub N N 91 ASN C OXT sing N N 92 ASN CB CG sing N N 93 ASN CB HB2 sing N N 94 ASN CB HB3 sing N N 95 ASN CG OD1 doub N N 96 ASN CG ND2 sing N N 97 ASN ND2 HD21 sing N N 98 ASN ND2 HD22 sing N N 99 ASN OXT HXT sing N N 100 ASP N CA sing N N 101 ASP N H sing N N 102 ASP N H2 sing N N 103 ASP CA C sing N N 104 ASP CA CB sing N N 105 ASP CA HA sing N N 106 ASP C O doub N N 107 ASP C OXT sing N N 108 ASP CB CG sing N N 109 ASP CB HB2 sing N N 110 ASP CB HB3 sing N N 111 ASP CG OD1 doub N N 112 ASP CG OD2 sing N N 113 ASP OD2 HD2 sing N N 114 ASP OXT HXT sing N N 115 CYS N CA sing N N 116 CYS N H sing N N 117 CYS N H2 sing N N 118 CYS CA C sing N N 119 CYS CA CB sing N N 120 CYS CA HA sing N N 121 CYS C O doub N N 122 CYS C OXT sing N N 123 CYS CB SG sing N N 124 CYS CB HB2 sing N N 125 CYS CB HB3 sing N N 126 CYS SG HG sing N N 127 CYS OXT HXT sing N N 128 DA OP3 P sing N N 129 DA OP3 HOP3 sing N N 130 DA P OP1 doub N N 131 DA P OP2 sing N N 132 DA P "O5'" sing N N 133 DA OP2 HOP2 sing N N 134 DA "O5'" "C5'" sing N N 135 DA "C5'" "C4'" sing N N 136 DA "C5'" "H5'" sing N N 137 DA "C5'" "H5''" sing N N 138 DA "C4'" "O4'" sing N N 139 DA "C4'" "C3'" sing N N 140 DA "C4'" "H4'" sing N N 141 DA "O4'" "C1'" sing N N 142 DA "C3'" "O3'" sing N N 143 DA "C3'" "C2'" sing N N 144 DA "C3'" "H3'" sing N N 145 DA "O3'" "HO3'" sing N N 146 DA "C2'" "C1'" sing N N 147 DA "C2'" "H2'" sing N N 148 DA "C2'" "H2''" sing N N 149 DA "C1'" N9 sing N N 150 DA "C1'" "H1'" sing N N 151 DA N9 C8 sing Y N 152 DA N9 C4 sing Y N 153 DA C8 N7 doub Y N 154 DA C8 H8 sing N N 155 DA N7 C5 sing Y N 156 DA C5 C6 sing Y N 157 DA C5 C4 doub Y N 158 DA C6 N6 sing N N 159 DA C6 N1 doub Y N 160 DA N6 H61 sing N N 161 DA N6 H62 sing N N 162 DA N1 C2 sing Y N 163 DA C2 N3 doub Y N 164 DA C2 H2 sing N N 165 DA N3 C4 sing Y N 166 DC OP3 P sing N N 167 DC OP3 HOP3 sing N N 168 DC P OP1 doub N N 169 DC P OP2 sing N N 170 DC P "O5'" sing N N 171 DC OP2 HOP2 sing N N 172 DC "O5'" "C5'" sing N N 173 DC "C5'" "C4'" sing N N 174 DC "C5'" "H5'" sing N N 175 DC "C5'" "H5''" sing N N 176 DC "C4'" "O4'" sing N N 177 DC "C4'" "C3'" sing N N 178 DC "C4'" "H4'" sing N N 179 DC "O4'" "C1'" sing N N 180 DC "C3'" "O3'" sing N N 181 DC "C3'" "C2'" sing N N 182 DC "C3'" "H3'" sing N N 183 DC "O3'" "HO3'" sing N N 184 DC "C2'" "C1'" sing N N 185 DC "C2'" "H2'" sing N N 186 DC "C2'" "H2''" sing N N 187 DC "C1'" N1 sing N N 188 DC "C1'" "H1'" sing N N 189 DC N1 C2 sing N N 190 DC N1 C6 sing N N 191 DC C2 O2 doub N N 192 DC C2 N3 sing N N 193 DC N3 C4 doub N N 194 DC C4 N4 sing N N 195 DC C4 C5 sing N N 196 DC N4 H41 sing N N 197 DC N4 H42 sing N N 198 DC C5 C6 doub N N 199 DC C5 H5 sing N N 200 DC C6 H6 sing N N 201 DG OP3 P sing N N 202 DG OP3 HOP3 sing N N 203 DG P OP1 doub N N 204 DG P OP2 sing N N 205 DG P "O5'" sing N N 206 DG OP2 HOP2 sing N N 207 DG "O5'" "C5'" sing N N 208 DG "C5'" "C4'" sing N N 209 DG "C5'" "H5'" sing N N 210 DG "C5'" "H5''" sing N N 211 DG "C4'" "O4'" sing N N 212 DG "C4'" "C3'" sing N N 213 DG "C4'" "H4'" sing N N 214 DG "O4'" "C1'" sing N N 215 DG "C3'" "O3'" sing N N 216 DG "C3'" "C2'" sing N N 217 DG "C3'" "H3'" sing N N 218 DG "O3'" "HO3'" sing N N 219 DG "C2'" "C1'" sing N N 220 DG "C2'" "H2'" sing N N 221 DG "C2'" "H2''" sing N N 222 DG "C1'" N9 sing N N 223 DG "C1'" "H1'" sing N N 224 DG N9 C8 sing Y N 225 DG N9 C4 sing Y N 226 DG C8 N7 doub Y N 227 DG C8 H8 sing N N 228 DG N7 C5 sing Y N 229 DG C5 C6 sing N N 230 DG C5 C4 doub Y N 231 DG C6 O6 doub N N 232 DG C6 N1 sing N N 233 DG N1 C2 sing N N 234 DG N1 H1 sing N N 235 DG C2 N2 sing N N 236 DG C2 N3 doub N N 237 DG N2 H21 sing N N 238 DG N2 H22 sing N N 239 DG N3 C4 sing N N 240 DT OP3 P sing N N 241 DT OP3 HOP3 sing N N 242 DT P OP1 doub N N 243 DT P OP2 sing N N 244 DT P "O5'" sing N N 245 DT OP2 HOP2 sing N N 246 DT "O5'" "C5'" sing N N 247 DT "C5'" "C4'" sing N N 248 DT "C5'" "H5'" sing N N 249 DT "C5'" "H5''" sing N N 250 DT "C4'" "O4'" sing N N 251 DT "C4'" "C3'" sing N N 252 DT "C4'" "H4'" sing N N 253 DT "O4'" "C1'" sing N N 254 DT "C3'" "O3'" sing N N 255 DT "C3'" "C2'" sing N N 256 DT "C3'" "H3'" sing N N 257 DT "O3'" "HO3'" sing N N 258 DT "C2'" "C1'" sing N N 259 DT "C2'" "H2'" sing N N 260 DT "C2'" "H2''" sing N N 261 DT "C1'" N1 sing N N 262 DT "C1'" "H1'" sing N N 263 DT N1 C2 sing N N 264 DT N1 C6 sing N N 265 DT C2 O2 doub N N 266 DT C2 N3 sing N N 267 DT N3 C4 sing N N 268 DT N3 H3 sing N N 269 DT C4 O4 doub N N 270 DT C4 C5 sing N N 271 DT C5 C7 sing N N 272 DT C5 C6 doub N N 273 DT C7 H71 sing N N 274 DT C7 H72 sing N N 275 DT C7 H73 sing N N 276 DT C6 H6 sing N N 277 GLN N CA sing N N 278 GLN N H sing N N 279 GLN N H2 sing N N 280 GLN CA C sing N N 281 GLN CA CB sing N N 282 GLN CA HA sing N N 283 GLN C O doub N N 284 GLN C OXT sing N N 285 GLN CB CG sing N N 286 GLN CB HB2 sing N N 287 GLN CB HB3 sing N N 288 GLN CG CD sing N N 289 GLN CG HG2 sing N N 290 GLN CG HG3 sing N N 291 GLN CD OE1 doub N N 292 GLN CD NE2 sing N N 293 GLN NE2 HE21 sing N N 294 GLN NE2 HE22 sing N N 295 GLN OXT HXT sing N N 296 GLU N CA sing N N 297 GLU N H sing N N 298 GLU N H2 sing N N 299 GLU CA C sing N N 300 GLU CA CB sing N N 301 GLU CA HA sing N N 302 GLU C O doub N N 303 GLU C OXT sing N N 304 GLU CB CG sing N N 305 GLU CB HB2 sing N N 306 GLU CB HB3 sing N N 307 GLU CG CD sing N N 308 GLU CG HG2 sing N N 309 GLU CG HG3 sing N N 310 GLU CD OE1 doub N N 311 GLU CD OE2 sing N N 312 GLU OE2 HE2 sing N N 313 GLU OXT HXT sing N N 314 GLY N CA sing N N 315 GLY N H sing N N 316 GLY N H2 sing N N 317 GLY CA C sing N N 318 GLY CA HA2 sing N N 319 GLY CA HA3 sing N N 320 GLY C O doub N N 321 GLY C OXT sing N N 322 GLY OXT HXT sing N N 323 HIS N CA sing N N 324 HIS N H sing N N 325 HIS N H2 sing N N 326 HIS CA C sing N N 327 HIS CA CB sing N N 328 HIS CA HA sing N N 329 HIS C O doub N N 330 HIS C OXT sing N N 331 HIS CB CG sing N N 332 HIS CB HB2 sing N N 333 HIS CB HB3 sing N N 334 HIS CG ND1 sing Y N 335 HIS CG CD2 doub Y N 336 HIS ND1 CE1 doub Y N 337 HIS ND1 HD1 sing N N 338 HIS CD2 NE2 sing Y N 339 HIS CD2 HD2 sing N N 340 HIS CE1 NE2 sing Y N 341 HIS CE1 HE1 sing N N 342 HIS NE2 HE2 sing N N 343 HIS OXT HXT sing N N 344 HOH O H1 sing N N 345 HOH O H2 sing N N 346 ILE N CA sing N N 347 ILE N H sing N N 348 ILE N H2 sing N N 349 ILE CA C sing N N 350 ILE CA CB sing N N 351 ILE CA HA sing N N 352 ILE C O doub N N 353 ILE C OXT sing N N 354 ILE CB CG1 sing N N 355 ILE CB CG2 sing N N 356 ILE CB HB sing N N 357 ILE CG1 CD1 sing N N 358 ILE CG1 HG12 sing N N 359 ILE CG1 HG13 sing N N 360 ILE CG2 HG21 sing N N 361 ILE CG2 HG22 sing N N 362 ILE CG2 HG23 sing N N 363 ILE CD1 HD11 sing N N 364 ILE CD1 HD12 sing N N 365 ILE CD1 HD13 sing N N 366 ILE OXT HXT sing N N 367 LEU N CA sing N N 368 LEU N H sing N N 369 LEU N H2 sing N N 370 LEU CA C sing N N 371 LEU CA CB sing N N 372 LEU CA HA sing N N 373 LEU C O doub N N 374 LEU C OXT sing N N 375 LEU CB CG sing N N 376 LEU CB HB2 sing N N 377 LEU CB HB3 sing N N 378 LEU CG CD1 sing N N 379 LEU CG CD2 sing N N 380 LEU CG HG sing N N 381 LEU CD1 HD11 sing N N 382 LEU CD1 HD12 sing N N 383 LEU CD1 HD13 sing N N 384 LEU CD2 HD21 sing N N 385 LEU CD2 HD22 sing N N 386 LEU CD2 HD23 sing N N 387 LEU OXT HXT sing N N 388 LYS N CA sing N N 389 LYS N H sing N N 390 LYS N H2 sing N N 391 LYS CA C sing N N 392 LYS CA CB sing N N 393 LYS CA HA sing N N 394 LYS C O doub N N 395 LYS C OXT sing N N 396 LYS CB CG sing N N 397 LYS CB HB2 sing N N 398 LYS CB HB3 sing N N 399 LYS CG CD sing N N 400 LYS CG HG2 sing N N 401 LYS CG HG3 sing N N 402 LYS CD CE sing N N 403 LYS CD HD2 sing N N 404 LYS CD HD3 sing N N 405 LYS CE NZ sing N N 406 LYS CE HE2 sing N N 407 LYS CE HE3 sing N N 408 LYS NZ HZ1 sing N N 409 LYS NZ HZ2 sing N N 410 LYS NZ HZ3 sing N N 411 LYS OXT HXT sing N N 412 MET N CA sing N N 413 MET N H sing N N 414 MET N H2 sing N N 415 MET CA C sing N N 416 MET CA CB sing N N 417 MET CA HA sing N N 418 MET C O doub N N 419 MET C OXT sing N N 420 MET CB CG sing N N 421 MET CB HB2 sing N N 422 MET CB HB3 sing N N 423 MET CG SD sing N N 424 MET CG HG2 sing N N 425 MET CG HG3 sing N N 426 MET SD CE sing N N 427 MET CE HE1 sing N N 428 MET CE HE2 sing N N 429 MET CE HE3 sing N N 430 MET OXT HXT sing N N 431 PHE N CA sing N N 432 PHE N H sing N N 433 PHE N H2 sing N N 434 PHE CA C sing N N 435 PHE CA CB sing N N 436 PHE CA HA sing N N 437 PHE C O doub N N 438 PHE C OXT sing N N 439 PHE CB CG sing N N 440 PHE CB HB2 sing N N 441 PHE CB HB3 sing N N 442 PHE CG CD1 doub Y N 443 PHE CG CD2 sing Y N 444 PHE CD1 CE1 sing Y N 445 PHE CD1 HD1 sing N N 446 PHE CD2 CE2 doub Y N 447 PHE CD2 HD2 sing N N 448 PHE CE1 CZ doub Y N 449 PHE CE1 HE1 sing N N 450 PHE CE2 CZ sing Y N 451 PHE CE2 HE2 sing N N 452 PHE CZ HZ sing N N 453 PHE OXT HXT sing N N 454 PPV O11 P1 sing N N 455 PPV O11 H11 sing N N 456 PPV P1 O21 sing N N 457 PPV P1 O31 doub N N 458 PPV P1 OPP sing N N 459 PPV O21 H21 sing N N 460 PPV OPP P2 sing N N 461 PPV P2 O12 sing N N 462 PPV P2 O22 doub N N 463 PPV P2 O32 sing N N 464 PPV O12 H12 sing N N 465 PPV O32 H32 sing N N 466 PRO N CA sing N N 467 PRO N CD sing N N 468 PRO N H sing N N 469 PRO CA C sing N N 470 PRO CA CB sing N N 471 PRO CA HA sing N N 472 PRO C O doub N N 473 PRO C OXT sing N N 474 PRO CB CG sing N N 475 PRO CB HB2 sing N N 476 PRO CB HB3 sing N N 477 PRO CG CD sing N N 478 PRO CG HG2 sing N N 479 PRO CG HG3 sing N N 480 PRO CD HD2 sing N N 481 PRO CD HD3 sing N N 482 PRO OXT HXT sing N N 483 SER N CA sing N N 484 SER N H sing N N 485 SER N H2 sing N N 486 SER CA C sing N N 487 SER CA CB sing N N 488 SER CA HA sing N N 489 SER C O doub N N 490 SER C OXT sing N N 491 SER CB OG sing N N 492 SER CB HB2 sing N N 493 SER CB HB3 sing N N 494 SER OG HG sing N N 495 SER OXT HXT sing N N 496 THR N CA sing N N 497 THR N H sing N N 498 THR N H2 sing N N 499 THR CA C sing N N 500 THR CA CB sing N N 501 THR CA HA sing N N 502 THR C O doub N N 503 THR C OXT sing N N 504 THR CB OG1 sing N N 505 THR CB CG2 sing N N 506 THR CB HB sing N N 507 THR OG1 HG1 sing N N 508 THR CG2 HG21 sing N N 509 THR CG2 HG22 sing N N 510 THR CG2 HG23 sing N N 511 THR OXT HXT sing N N 512 TRP N CA sing N N 513 TRP N H sing N N 514 TRP N H2 sing N N 515 TRP CA C sing N N 516 TRP CA CB sing N N 517 TRP CA HA sing N N 518 TRP C O doub N N 519 TRP C OXT sing N N 520 TRP CB CG sing N N 521 TRP CB HB2 sing N N 522 TRP CB HB3 sing N N 523 TRP CG CD1 doub Y N 524 TRP CG CD2 sing Y N 525 TRP CD1 NE1 sing Y N 526 TRP CD1 HD1 sing N N 527 TRP CD2 CE2 doub Y N 528 TRP CD2 CE3 sing Y N 529 TRP NE1 CE2 sing Y N 530 TRP NE1 HE1 sing N N 531 TRP CE2 CZ2 sing Y N 532 TRP CE3 CZ3 doub Y N 533 TRP CE3 HE3 sing N N 534 TRP CZ2 CH2 doub Y N 535 TRP CZ2 HZ2 sing N N 536 TRP CZ3 CH2 sing Y N 537 TRP CZ3 HZ3 sing N N 538 TRP CH2 HH2 sing N N 539 TRP OXT HXT sing N N 540 TYR N CA sing N N 541 TYR N H sing N N 542 TYR N H2 sing N N 543 TYR CA C sing N N 544 TYR CA CB sing N N 545 TYR CA HA sing N N 546 TYR C O doub N N 547 TYR C OXT sing N N 548 TYR CB CG sing N N 549 TYR CB HB2 sing N N 550 TYR CB HB3 sing N N 551 TYR CG CD1 doub Y N 552 TYR CG CD2 sing Y N 553 TYR CD1 CE1 sing Y N 554 TYR CD1 HD1 sing N N 555 TYR CD2 CE2 doub Y N 556 TYR CD2 HD2 sing N N 557 TYR CE1 CZ doub Y N 558 TYR CE1 HE1 sing N N 559 TYR CE2 CZ sing Y N 560 TYR CE2 HE2 sing N N 561 TYR CZ OH sing N N 562 TYR OH HH sing N N 563 TYR OXT HXT sing N N 564 VAL N CA sing N N 565 VAL N H sing N N 566 VAL N H2 sing N N 567 VAL CA C sing N N 568 VAL CA CB sing N N 569 VAL CA HA sing N N 570 VAL C O doub N N 571 VAL C OXT sing N N 572 VAL CB CG1 sing N N 573 VAL CB CG2 sing N N 574 VAL CB HB sing N N 575 VAL CG1 HG11 sing N N 576 VAL CG1 HG12 sing N N 577 VAL CG1 HG13 sing N N 578 VAL CG2 HG21 sing N N 579 VAL CG2 HG22 sing N N 580 VAL CG2 HG23 sing N N 581 VAL OXT HXT sing N N 582 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4RQ6 'double helix' 4RQ6 'b-form double helix' 4RQ6 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 0.207 0.075 -0.680 -21.552 -4.020 -10.010 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 0.483 -0.025 0.351 -10.509 -12.459 2.564 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 -0.300 0.233 -0.126 -7.248 -17.252 1.172 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 -0.917 -0.437 0.309 0.925 -13.597 -10.958 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 B DG 5 1_555 D DC 1 1_555 -0.142 0.099 1.221 29.716 -5.759 -4.921 5 D_DG5:DC1_T D 5 ? T 1 ? 19 1 1 C DG 1 1_555 D DC 16 1_555 -0.351 -0.008 0.164 -7.291 -13.997 3.237 6 P_DG1:DC16_T P 1 ? T 16 ? 19 1 1 C DC 2 1_555 D DG 15 1_555 0.180 -0.116 0.231 -6.056 -13.677 3.727 7 P_DC2:DG15_T P 2 ? T 15 ? 19 1 1 C DT 3 1_555 D DA 14 1_555 -0.108 -0.118 0.160 -0.312 -9.082 0.129 8 P_DT3:DA14_T P 3 ? T 14 ? 20 1 1 C DG 4 1_555 D DC 13 1_555 -0.249 0.050 -0.031 -2.193 -11.239 1.179 9 P_DG4:DC13_T P 4 ? T 13 ? 19 1 1 C DA 5 1_555 D DT 12 1_555 -0.382 -0.098 0.026 -1.297 -12.769 4.717 10 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 C DT 6 1_555 D DA 11 1_555 0.006 -0.001 0.073 3.588 -12.301 4.895 11 P_DT6:DA11_T P 6 ? T 11 ? 20 1 1 C DG 7 1_555 D DC 10 1_555 -0.155 -0.034 -0.209 -6.560 -6.301 -0.597 12 P_DG7:DC10_T P 7 ? T 10 ? 19 1 1 C DC 8 1_555 D DG 9 1_555 0.136 -0.160 -0.264 -0.097 -1.845 -0.356 13 P_DC8:DG9_T P 8 ? T 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.326 -0.130 -0.544 -21.709 -8.328 1.844 14 P_DG9:DC8_T P 9 ? T 8 ? 19 1 1 C DC 10 1_555 D DG 7 1_555 0.067 -0.011 0.276 -9.637 -3.416 0.809 15 P_DC10:DG7_T P 10 ? T 7 ? 19 1 1 C DA 11 1_555 D 8OG 6 1_555 0.178 4.816 -0.431 9.869 5.537 -79.206 16 P_DA11:8OG6_T P 11 ? T 6 ? ? 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.473 -0.179 3.089 -7.536 0.580 29.167 -0.458 -0.573 3.107 1.128 14.656 30.110 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 0.061 0.187 3.005 7.145 1.607 31.842 0.076 1.035 2.955 2.881 -12.812 32.652 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 -0.290 2.411 3.390 -5.946 -0.447 39.398 3.592 -0.290 3.370 -0.659 8.759 39.829 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 B DG 4 1_555 D DC 2 1_555 B DG 5 1_555 D DC 1 1_555 0.666 0.365 2.774 -8.504 0.309 33.177 0.580 -2.237 2.534 0.531 14.596 34.221 4 DD_DG4DG5:DC1DC2_TT D 4 ? T 2 ? D 5 ? T 1 ? 1 C DG 1 1_555 D DC 16 1_555 C DC 2 1_555 D DG 15 1_555 -0.381 -0.748 3.138 1.436 6.027 36.209 -1.961 0.788 2.963 9.611 -2.290 36.718 5 PP_DG1DC2:DG15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DC 2 1_555 D DG 15 1_555 C DT 3 1_555 D DA 14 1_555 -0.137 -0.132 3.186 2.519 7.190 29.857 -1.609 0.734 3.050 13.677 -4.792 30.793 6 PP_DC2DT3:DA14DG15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DG 4 1_555 D DC 13 1_555 0.285 0.233 3.232 2.130 8.532 35.809 -0.790 -0.162 3.212 13.625 -3.401 36.839 7 PP_DT3DG4:DC13DA14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DG 4 1_555 D DC 13 1_555 C DA 5 1_555 D DT 12 1_555 -0.047 -0.202 3.184 -2.147 5.340 33.992 -1.145 -0.244 3.114 9.053 3.639 34.462 8 PP_DG4DA5:DT12DC13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DA 5 1_555 D DT 12 1_555 C DT 6 1_555 D DA 11 1_555 0.106 -0.373 3.198 -0.212 -0.636 31.169 -0.575 -0.237 3.204 -1.183 0.394 31.176 9 PP_DA5DT6:DA11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DT 6 1_555 D DA 11 1_555 C DG 7 1_555 D DC 10 1_555 -0.255 -0.187 3.442 1.947 8.207 38.601 -1.289 0.617 3.319 12.237 -2.903 39.477 10 PP_DT6DG7:DC10DA11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DG 7 1_555 D DC 10 1_555 C DC 8 1_555 D DG 9 1_555 0.590 -0.464 3.226 1.475 2.922 30.656 -1.433 -0.828 3.193 5.506 -2.780 30.826 11 PP_DG7DC8:DG9DC10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DC 8 1_555 D DG 9 1_555 C DG 9 1_555 D DC 8 1_555 1.153 -0.124 3.830 5.572 7.027 38.814 -1.154 -0.923 3.873 10.406 -8.251 39.797 12 PP_DC8DG9:DC8DG9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DC 10 1_555 D DG 7 1_555 -0.299 -0.752 3.165 -4.093 8.071 30.348 -2.790 -0.167 2.889 15.003 7.608 31.638 13 PP_DG9DC10:DG7DC8_TT P 9 ? T 8 ? P 10 ? T 7 ? 1 C DC 10 1_555 D DG 7 1_555 C DA 11 1_555 D 8OG 6 1_555 0.834 -2.521 3.034 6.663 10.605 63.234 -2.768 -0.532 2.692 10.010 -6.289 64.336 14 PP_DC10DA11:8OG6DG7_TT P 10 ? T 7 ? P 11 ? T 6 ? # _atom_sites.entry_id 4RQ6 _atom_sites.fract_transf_matrix[1][1] 0.019837 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006350 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012430 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018857 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S # loop_