HEADER LIGASE 06-NOV-14 4RRK TITLE Y115A MUTANT OF N-TERMINAL EDITING DOMAIN OF THREONYL-TRNA SYNTHETASE TITLE 2 FROM AEROPYRUM PERNIX WITH L-THR3AA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE THREONINE--TRNA LIGASE 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-136; COMPND 5 SYNONYM: THREONYL-TRNA SYNTHETASE 2, THRRS 2; COMPND 6 EC: 6.1.1.3; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROPYRUM PERNIX K1; SOURCE 3 ORGANISM_TAXID: 272557; SOURCE 4 STRAIN: ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1; SOURCE 5 GENE: THRS2, APE_0117.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DTD-LIKE FOLD, PROOFREADING, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR S.AHMAD,S.MUTHUKUMAR,R.SANKARANARAYANAN REVDAT 3 28-FEB-24 4RRK 1 REMARK SEQADV REVDAT 2 22-NOV-17 4RRK 1 REMARK REVDAT 1 15-JUL-15 4RRK 0 JRNL AUTH S.AHMAD,S.MUTHUKUMAR,S.K.KUNCHA,S.B.ROUTH,A.S.YERABHAM, JRNL AUTH 2 T.HUSSAIN,V.KAMARTHAPU,S.P.KRUPARANI,R.SANKARANARAYANAN JRNL TITL SPECIFICITY AND CATALYSIS HARDWIRED AT THE RNA-PROTEIN JRNL TITL 2 INTERFACE IN A TRANSLATIONAL PROOFREADING ENZYME. JRNL REF NAT COMMUN V. 6 7552 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26113036 JRNL DOI 10.1038/NCOMMS8552 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 11276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 565 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 697 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 30 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1061 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 127 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.44000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.962 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1120 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1523 ; 1.409 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 135 ; 6.588 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 43 ;41.265 ;21.628 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 177 ;13.132 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;16.757 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 168 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 845 ; 0.007 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4RRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000087709. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11276 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS HCL PH 8.5, 0.2M MGCL2, 30% REMARK 280 PEG4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.24050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 23.96050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 23.96050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.62025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 23.96050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 23.96050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 85.86075 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 23.96050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 23.96050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.62025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 23.96050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 23.96050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 85.86075 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 57.24050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 707 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 16 -107.18 -120.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A3T A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RR6 RELATED DB: PDB REMARK 900 RELATED ID: 4RR7 RELATED DB: PDB REMARK 900 RELATED ID: 4RR8 RELATED DB: PDB REMARK 900 RELATED ID: 4RR9 RELATED DB: PDB REMARK 900 RELATED ID: 4RRA RELATED DB: PDB REMARK 900 RELATED ID: 4RRB RELATED DB: PDB REMARK 900 RELATED ID: 4RRC RELATED DB: PDB REMARK 900 RELATED ID: 4RRD RELATED DB: PDB REMARK 900 RELATED ID: 4RRF RELATED DB: PDB REMARK 900 RELATED ID: 4RRG RELATED DB: PDB REMARK 900 RELATED ID: 4RRH RELATED DB: PDB REMARK 900 RELATED ID: 4RRI RELATED DB: PDB REMARK 900 RELATED ID: 4RRJ RELATED DB: PDB REMARK 900 RELATED ID: 4RRL RELATED DB: PDB REMARK 900 RELATED ID: 4RRM RELATED DB: PDB REMARK 900 RELATED ID: 4RRQ RELATED DB: PDB REMARK 900 RELATED ID: 4RRR RELATED DB: PDB DBREF 4RRK A 1 136 UNP Q9YFY3 SYT2_AERPE 1 136 SEQADV 4RRK ALA A 115 UNP Q9YFY3 TYR 115 ENGINEERED MUTATION SEQRES 1 A 136 MET ARG LEU LEU TYR LEU HIS ALA ASP ARG PHE GLU TYR SEQRES 2 A 136 LYS THR VAL LYS PRO ALA LEU LYS ASN PRO PRO ASP PRO SEQRES 3 A 136 PRO GLY GLU ALA SER PHE GLY GLU ALA LEU VAL VAL PHE SEQRES 4 A 136 THR THR VAL GLU ASP GLY ASP GLY PRO GLN THR VAL MET SEQRES 5 A 136 TYR ALA ALA SER ASP ILE ALA SER HIS SER SER ARG LEU SEQRES 6 A 136 LYS VAL THR THR VAL ILE LEU TYR PRO TYR ALA HIS LEU SEQRES 7 A 136 SER SER ARG LEU ALA LYS PRO MET ALA ALA HIS LYS ARG SEQRES 8 A 136 LEU ILE GLU LEU GLU GLY ALA LEU ARG THR LYS PHE PRO SEQRES 9 A 136 GLY HIS VAL HIS ARG ALA PRO PHE GLY TRP ALA LYS SER SEQRES 10 A 136 PHE SER ILE ALA CYS LYS GLY HIS PRO LEU ALA GLU LEU SEQRES 11 A 136 SER ARG SER PHE THR GLU HET A3T A 501 26 HET MG A 502 1 HETNAM A3T 3'-DEOXY-3'-(L-THREONYLAMINO)ADENOSINE HETNAM MG MAGNESIUM ION FORMUL 2 A3T C14 H21 N7 O5 FORMUL 3 MG MG 2+ FORMUL 4 HOH *127(H2 O) HELIX 1 1 GLY A 47 LYS A 66 1 20 HELIX 2 2 LYS A 84 THR A 101 1 18 SHEET 1 A 3 GLU A 29 PHE A 32 0 SHEET 2 A 3 ARG A 2 PRO A 18 -1 N PHE A 11 O PHE A 32 SHEET 3 A 3 TRP A 114 CYS A 122 -1 O ALA A 121 N ASP A 9 SHEET 1 B 5 HIS A 106 ARG A 109 0 SHEET 2 B 5 THR A 69 PRO A 74 1 N LEU A 72 O HIS A 108 SHEET 3 B 5 ALA A 35 THR A 41 1 N VAL A 38 O ILE A 71 SHEET 4 B 5 ARG A 2 PRO A 18 -1 N LEU A 6 O VAL A 37 SHEET 5 B 5 GLU A 129 SER A 133 -1 O LEU A 130 N TYR A 5 LINK O SER A 133 MG MG A 502 1555 1555 2.63 SITE 1 AC1 17 ALA A 19 THR A 40 VAL A 42 PRO A 74 SITE 2 AC1 17 TYR A 75 ALA A 76 ALA A 83 ALA A 88 SITE 3 AC1 17 PHE A 112 GLY A 113 TRP A 114 LYS A 116 SITE 4 AC1 17 GLU A 129 HOH A 611 HOH A 620 HOH A 628 SITE 5 AC1 17 HOH A 685 SITE 1 AC2 5 ARG A 100 HIS A 106 VAL A 107 SER A 133 SITE 2 AC2 5 PHE A 134 CRYST1 47.921 47.921 114.481 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020868 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020868 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008735 0.00000 TER 1062 GLU A 136 HETATM 1063 C A3T A 501 12.535 -2.648 -3.409 1.00 21.79 C HETATM 1064 N A3T A 501 10.242 -3.216 -2.550 1.00 22.72 N HETATM 1065 O A3T A 501 12.511 -1.306 -3.146 1.00 19.21 O HETATM 1066 N1 A3T A 501 17.630 1.181 1.029 1.00 16.36 N HETATM 1067 C2 A3T A 501 16.655 0.184 1.181 1.00 16.37 C HETATM 1068 N3 A3T A 501 16.611 -0.864 0.221 1.00 17.68 N HETATM 1069 C4 A3T A 501 17.509 -0.852 -0.787 1.00 17.75 C HETATM 1070 C5 A3T A 501 18.429 0.126 -0.904 1.00 17.28 C HETATM 1071 C6 A3T A 501 18.484 1.130 -0.003 1.00 16.71 C HETATM 1072 N6 A3T A 501 19.422 2.079 -0.151 1.00 16.22 N HETATM 1073 N7 A3T A 501 19.175 -0.147 -1.989 1.00 17.99 N HETATM 1074 C8 A3T A 501 18.707 -1.275 -2.536 1.00 17.82 C HETATM 1075 N8 A3T A 501 13.654 -3.397 -3.516 1.00 21.08 N HETATM 1076 N9 A3T A 501 17.675 -1.720 -1.800 1.00 18.46 N HETATM 1077 CA A3T A 501 11.187 -3.398 -3.678 1.00 22.85 C HETATM 1078 CB A3T A 501 10.531 -2.994 -5.030 1.00 25.06 C HETATM 1079 OG A3T A 501 9.492 -3.948 -5.389 1.00 24.68 O HETATM 1080 C1' A3T A 501 16.910 -3.024 -2.028 1.00 19.24 C HETATM 1081 C2' A3T A 501 15.401 -3.085 -1.874 1.00 19.01 C HETATM 1082 O2' A3T A 501 14.994 -4.448 -1.433 1.00 18.93 O HETATM 1083 C3' A3T A 501 14.997 -2.850 -3.285 1.00 19.88 C HETATM 1084 C4' A3T A 501 16.035 -3.672 -4.069 1.00 20.68 C HETATM 1085 O4' A3T A 501 17.259 -3.586 -3.315 1.00 20.16 O HETATM 1086 C5' A3T A 501 16.335 -3.019 -5.421 1.00 21.25 C HETATM 1087 O5' A3T A 501 16.685 -1.652 -5.193 1.00 23.40 O HETATM 1088 CG2 A3T A 501 11.577 -2.945 -6.165 1.00 25.78 C HETATM 1089 MG MG A 502 13.343 12.153 13.041 1.00 26.04 MG HETATM 1090 O HOH A 601 -4.249 6.134 6.532 1.00 17.31 O HETATM 1091 O HOH A 602 9.282 -13.220 11.253 1.00 14.96 O HETATM 1092 O HOH A 603 12.907 -11.267 10.367 1.00 15.30 O HETATM 1093 O HOH A 604 11.214 -14.811 -5.600 1.00 23.06 O HETATM 1094 O HOH A 605 21.245 12.829 14.709 1.00 18.89 O HETATM 1095 O HOH A 606 15.037 8.182 18.317 1.00 17.54 O HETATM 1096 O HOH A 607 11.382 -8.300 19.696 1.00 20.64 O HETATM 1097 O HOH A 608 8.885 13.754 7.308 1.00 24.80 O HETATM 1098 O HOH A 609 11.464 -12.793 12.736 1.00 19.53 O HETATM 1099 O HOH A 610 13.019 -10.377 19.290 1.00 16.57 O HETATM 1100 O HOH A 611 -3.746 7.618 2.686 1.00 17.39 O HETATM 1101 O HOH A 612 3.438 -12.329 -6.421 1.00 29.32 O HETATM 1102 O HOH A 613 25.297 3.151 5.317 1.00 20.39 O HETATM 1103 O HOH A 614 2.014 4.942 11.592 1.00 16.96 O HETATM 1104 O HOH A 615 -8.949 9.909 10.596 1.00 22.06 O HETATM 1105 O HOH A 616 1.819 -10.204 -2.596 1.00 22.27 O HETATM 1106 O HOH A 617 22.333 9.860 6.591 1.00 22.22 O HETATM 1107 O HOH A 618 -2.737 -8.454 3.184 1.00 33.13 O HETATM 1108 O HOH A 619 17.920 -9.763 14.670 1.00 24.53 O HETATM 1109 O HOH A 620 12.378 -4.574 -0.791 1.00 23.66 O HETATM 1110 O HOH A 621 19.611 -8.665 12.644 1.00 27.29 O HETATM 1111 O HOH A 622 -1.755 9.669 9.112 1.00 21.67 O HETATM 1112 O HOH A 623 -8.953 2.507 9.532 1.00 29.13 O HETATM 1113 O HOH A 624 26.791 3.740 0.736 1.00 22.99 O HETATM 1114 O HOH A 625 18.763 6.388 20.567 1.00 25.64 O HETATM 1115 O HOH A 626 16.613 12.694 -1.347 1.00 29.51 O HETATM 1116 O HOH A 627 32.238 3.401 -6.598 1.00 21.13 O HETATM 1117 O HOH A 628 21.400 1.090 -3.355 1.00 25.49 O HETATM 1118 O HOH A 629 -4.622 -8.520 13.421 1.00 28.32 O HETATM 1119 O HOH A 630 -2.455 -10.739 5.719 1.00 32.59 O HETATM 1120 O HOH A 631 19.591 -7.768 18.966 1.00 25.79 O HETATM 1121 O HOH A 632 32.313 2.168 -2.262 1.00 30.64 O HETATM 1122 O HOH A 633 24.892 15.210 14.182 1.00 31.49 O HETATM 1123 O HOH A 634 6.634 7.975 19.141 1.00 28.70 O HETATM 1124 O HOH A 635 15.869 6.238 -5.213 1.00 28.77 O HETATM 1125 O HOH A 636 14.281 13.698 4.523 1.00 27.65 O HETATM 1126 O HOH A 637 2.384 -13.240 0.957 1.00 26.45 O HETATM 1127 O HOH A 638 0.415 -10.799 12.409 1.00 27.97 O HETATM 1128 O HOH A 639 12.107 8.787 19.135 1.00 30.68 O HETATM 1129 O HOH A 640 -1.723 -14.288 7.494 1.00 47.56 O HETATM 1130 O HOH A 641 13.718 -14.481 2.644 1.00 32.37 O HETATM 1131 O HOH A 642 19.794 3.819 21.703 1.00 33.62 O HETATM 1132 O HOH A 643 12.104 3.888 22.354 1.00 28.99 O HETATM 1133 O HOH A 644 23.185 7.854 -3.470 1.00 30.71 O HETATM 1134 O HOH A 645 12.687 -12.507 5.805 1.00 30.89 O HETATM 1135 O HOH A 646 23.027 -5.607 -9.253 1.00 45.92 O HETATM 1136 O HOH A 647 22.556 11.191 3.143 1.00 45.71 O HETATM 1137 O HOH A 648 14.849 3.151 23.106 1.00 32.75 O HETATM 1138 O HOH A 649 -7.614 -0.172 5.404 1.00 26.96 O HETATM 1139 O HOH A 650 16.571 -12.010 10.440 1.00 34.30 O HETATM 1140 O HOH A 651 13.581 11.788 0.666 1.00 31.55 O HETATM 1141 O HOH A 652 8.169 -15.289 -3.272 1.00 31.61 O HETATM 1142 O HOH A 653 16.320 11.718 5.153 1.00 28.07 O HETATM 1143 O HOH A 654 5.474 12.593 9.432 1.00 28.70 O HETATM 1144 O HOH A 655 5.771 5.582 23.147 1.00 34.11 O HETATM 1145 O HOH A 656 6.087 -10.094 -12.420 1.00 50.36 O HETATM 1146 O HOH A 657 9.013 -17.407 2.719 1.00 35.70 O HETATM 1147 O HOH A 658 26.339 14.887 9.569 1.00 47.07 O HETATM 1148 O HOH A 659 12.268 0.584 24.612 1.00 38.55 O HETATM 1149 O HOH A 660 -8.078 3.304 12.497 1.00 26.30 O HETATM 1150 O HOH A 661 2.930 -18.368 -3.439 1.00 40.38 O HETATM 1151 O HOH A 662 27.213 -2.474 -2.852 1.00 22.26 O HETATM 1152 O HOH A 663 26.614 4.687 3.230 1.00 22.57 O HETATM 1153 O HOH A 664 -4.015 7.809 8.082 1.00 23.59 O HETATM 1154 O HOH A 665 5.873 14.921 7.817 1.00 23.75 O HETATM 1155 O HOH A 666 15.566 -13.032 4.512 1.00 28.62 O HETATM 1156 O HOH A 667 -8.922 -0.472 3.132 1.00 38.92 O HETATM 1157 O HOH A 668 16.418 8.396 20.724 1.00 27.57 O HETATM 1158 O HOH A 669 13.571 -7.388 -1.571 1.00 25.45 O HETATM 1159 O HOH A 670 12.991 -7.640 -10.908 1.00 33.07 O HETATM 1160 O HOH A 671 22.287 -3.463 15.889 1.00 29.46 O HETATM 1161 O HOH A 672 5.749 -14.323 -6.236 1.00 31.11 O HETATM 1162 O HOH A 673 11.628 7.502 21.332 1.00 38.22 O HETATM 1163 O HOH A 674 0.887 -8.953 16.527 1.00 30.55 O HETATM 1164 O HOH A 675 7.014 -17.552 -4.066 1.00 42.71 O HETATM 1165 O HOH A 676 9.538 9.140 -2.859 1.00 27.48 O HETATM 1166 O HOH A 677 10.432 -13.923 3.788 1.00 26.31 O HETATM 1167 O HOH A 678 8.798 -16.621 -5.772 1.00 37.17 O HETATM 1168 O HOH A 679 -6.378 -7.293 11.257 1.00 40.01 O HETATM 1169 O HOH A 680 20.505 11.490 5.312 1.00 36.21 O HETATM 1170 O HOH A 681 27.063 16.298 11.835 1.00 46.67 O HETATM 1171 O HOH A 682 -11.199 4.210 9.332 1.00 40.59 O HETATM 1172 O HOH A 683 19.439 -9.915 17.131 1.00 37.77 O HETATM 1173 O HOH A 684 9.792 -17.712 -3.172 1.00 42.42 O HETATM 1174 O HOH A 685 15.513 -0.264 -7.052 1.00 38.61 O HETATM 1175 O HOH A 686 7.872 -0.780 21.873 1.00 32.37 O HETATM 1176 O HOH A 687 0.033 -5.383 16.059 1.00 28.37 O HETATM 1177 O HOH A 688 8.127 9.431 16.941 1.00 32.88 O HETATM 1178 O HOH A 689 5.604 -2.235 22.634 1.00 31.75 O HETATM 1179 O HOH A 690 14.518 8.195 22.707 1.00 35.13 O HETATM 1180 O HOH A 691 -4.268 3.457 20.513 1.00 46.02 O HETATM 1181 O HOH A 692 12.498 -17.094 -6.513 1.00 33.95 O HETATM 1182 O HOH A 693 6.018 -17.466 5.000 1.00 30.18 O HETATM 1183 O HOH A 694 -7.718 -8.164 8.815 1.00 50.35 O HETATM 1184 O HOH A 695 20.830 -12.922 4.804 1.00 43.51 O HETATM 1185 O HOH A 696 -1.059 -15.662 -0.852 1.00 58.69 O HETATM 1186 O HOH A 697 13.423 -0.210 -8.775 1.00 40.28 O HETATM 1187 O HOH A 698 -5.864 -1.626 16.683 1.00 46.48 O HETATM 1188 O HOH A 699 -6.123 -4.181 18.409 1.00 44.98 O HETATM 1189 O HOH A 700 19.344 16.283 6.063 1.00 30.57 O HETATM 1190 O HOH A 701 21.619 14.260 6.326 1.00 40.44 O HETATM 1191 O HOH A 702 23.669 14.260 8.083 1.00 40.69 O HETATM 1192 O HOH A 703 25.543 0.857 18.018 1.00 42.08 O HETATM 1193 O HOH A 704 28.752 -0.625 5.754 1.00 32.71 O HETATM 1194 O HOH A 705 1.526 -18.694 -0.892 1.00 40.14 O HETATM 1195 O HOH A 706 -1.002 -19.311 -0.326 1.00 34.86 O HETATM 1196 O HOH A 707 9.897 9.897 0.000 0.50 23.85 O HETATM 1197 O HOH A 708 27.774 -0.792 -5.364 1.00 34.04 O HETATM 1198 O HOH A 709 19.728 -1.151 22.452 1.00 33.53 O HETATM 1199 O HOH A 710 -4.416 4.605 17.809 1.00 43.57 O HETATM 1200 O HOH A 711 -3.001 7.271 20.446 1.00 49.71 O HETATM 1201 O HOH A 712 24.695 -10.402 10.093 1.00 37.25 O HETATM 1202 O HOH A 713 24.815 -5.699 9.814 1.00 30.44 O HETATM 1203 O HOH A 714 25.686 -7.858 7.977 1.00 39.62 O HETATM 1204 O HOH A 715 -3.738 -12.843 8.695 1.00 53.19 O HETATM 1205 O HOH A 716 19.735 -16.172 -2.768 1.00 41.14 O HETATM 1206 O HOH A 717 17.351 -18.352 -4.667 1.00 44.36 O HETATM 1207 O HOH A 718 15.542 -17.813 -6.661 1.00 39.29 O HETATM 1208 O HOH A 719 10.197 2.628 23.604 1.00 38.46 O HETATM 1209 O HOH A 720 -9.445 -3.879 6.960 1.00 42.86 O HETATM 1210 O HOH A 721 1.004 -12.335 -1.139 1.00 36.48 O HETATM 1211 O HOH A 722 23.709 0.806 16.046 1.00 40.11 O HETATM 1212 O HOH A 723 27.634 5.886 13.873 1.00 38.20 O HETATM 1213 O HOH A 724 23.068 8.160 20.705 1.00 45.34 O HETATM 1214 O HOH A 725 15.482 11.938 2.457 1.00 38.09 O HETATM 1215 O HOH A 726 5.929 -2.092 25.448 1.00 32.49 O HETATM 1216 O HOH A 727 22.221 -7.371 14.174 1.00 41.05 O CONECT 1031 1089 CONECT 1063 1065 1075 1077 CONECT 1064 1077 CONECT 1065 1063 CONECT 1066 1067 1071 CONECT 1067 1066 1068 CONECT 1068 1067 1069 CONECT 1069 1068 1070 1076 CONECT 1070 1069 1071 1073 CONECT 1071 1066 1070 1072 CONECT 1072 1071 CONECT 1073 1070 1074 CONECT 1074 1073 1076 CONECT 1075 1063 1083 CONECT 1076 1069 1074 1080 CONECT 1077 1063 1064 1078 CONECT 1078 1077 1079 1088 CONECT 1079 1078 CONECT 1080 1076 1081 1085 CONECT 1081 1080 1082 1083 CONECT 1082 1081 CONECT 1083 1075 1081 1084 CONECT 1084 1083 1085 1086 CONECT 1085 1080 1084 CONECT 1086 1084 1087 CONECT 1087 1086 CONECT 1088 1078 CONECT 1089 1031 MASTER 312 0 2 2 8 0 7 6 1215 1 28 11 END