HEADER SIGNALING PROTEIN 07-NOV-14 4RSG TITLE NEUTRON CRYSTAL STRUCTURE OF RAS BOUND TO THE GTP ANALOGUE GPPNHP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-RAS-1, HA-RAS, TRANSFORMING PROTEIN P21, C-H-RAS, P21RAS, COMPND 5 GTPASE HRAS, N-TERMINALLY PROCESSED; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS ONCOPROTEIN, NUCLEOTIDE-BINDING PROTEIN, PROTEIN-NUCLEOTIDE COMPLEX, KEYWDS 2 SIGNALING PROTEIN EXPDTA NEUTRON DIFFRACTION AUTHOR R.R.KNIHTILA,G.HOLZAPFEL,K.L.WEISS,F.MEILLEUR,C.MATTOS REVDAT 6 28-FEB-24 4RSG 1 REMARK REVDAT 5 30-JUN-21 4RSG 1 REMARK LINK REVDAT 4 25-APR-18 4RSG 1 REMARK REVDAT 3 13-JAN-16 4RSG 1 JRNL REVDAT 2 18-NOV-15 4RSG 1 JRNL REVDAT 1 04-NOV-15 4RSG 0 JRNL AUTH R.KNIHTILA,G.HOLZAPFEL,K.WEISS,F.MEILLEUR,C.MATTOS JRNL TITL NEUTRON CRYSTAL STRUCTURE OF RAS GTPASE PUTS IN QUESTION THE JRNL TITL 2 PROTONATION STATE OF THE GTP GAMMA-PHOSPHATE. JRNL REF J.BIOL.CHEM. V. 290 31025 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 26515069 JRNL DOI 10.1074/JBC.M115.679860 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 79.6 REMARK 3 NUMBER OF REFLECTIONS : 9882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 17.0096 - 3.6369 0.94 1599 183 0.2270 0.2737 REMARK 3 2 3.6369 - 2.8913 0.88 1425 159 0.2215 0.2272 REMARK 3 3 2.8913 - 2.5272 0.85 1342 155 0.2470 0.2868 REMARK 3 4 2.5272 - 2.2967 0.81 1292 139 0.2312 0.2955 REMARK 3 5 2.2967 - 2.1325 0.78 1208 145 0.2688 0.2901 REMARK 3 6 2.1325 - 2.0069 0.73 1119 123 0.3018 0.3467 REMARK 3 7 2.0069 - 1.9066 0.57 894 99 0.3318 0.3974 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 8.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 2584 REMARK 3 ANGLE : 0.872 4511 REMARK 3 CHIRALITY : 0.036 203 REMARK 3 PLANARITY : 0.003 442 REMARK 3 DIHEDRAL : 18.327 707 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RSG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000087739. REMARK 230 REMARK 230 EXPERIMENTAL DETAILS REMARK 230 EXPERIMENT TYPE : NEUTRON DIFFRACTION REMARK 230 DATE OF DATA COLLECTION : 09-MAY-14 REMARK 230 TEMPERATURE (KELVIN) : 293.0 REMARK 230 PH : 7.50 REMARK 230 NUMBER OF CRYSTALS USED : 1 REMARK 230 REMARK 230 NEUTRON SOURCE : NUCLEAR REACTOR REMARK 230 BEAMLINE : CG4D REMARK 230 WAVELENGTH OR RANGE (A) : 3.3-4.5 REMARK 230 MONOCHROMATOR : NEUTRON MIRRORS AND NEUTRON REMARK 230 FILTERS REMARK 230 OPTICS : NULL REMARK 230 REMARK 230 DETECTOR TYPE : IMAGE PLATE REMARK 230 DETECTOR MANUFACTURER : FUJI REMARK 230 INTENSITY-INTEGRATION SOFTWARE : LAUEGEN REMARK 230 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 230 REMARK 230 NUMBER OF UNIQUE REFLECTIONS : 9888 REMARK 230 RESOLUTION RANGE HIGH (A) : 1.899 REMARK 230 RESOLUTION RANGE LOW (A) : 17.010 REMARK 230 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 230 REMARK 230 OVERALL. REMARK 230 COMPLETENESS FOR RANGE (%) : 82.1 REMARK 230 DATA REDUNDANCY : 6.200 REMARK 230 R MERGE (I) : 0.26200 REMARK 230 R SYM (I) : 0.26200 REMARK 230 FOR THE DATA SET : 5.6000 REMARK 230 REMARK 230 IN THE HIGHEST RESOLUTION SHELL. REMARK 230 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 230 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 230 COMPLETENESS FOR SHELL (%) : 60.4 REMARK 230 DATA REDUNDANCY IN SHELL : 3.00 REMARK 230 R MERGE FOR SHELL (I) : 0.37900 REMARK 230 R SYM FOR SHELL (I) : 0.37900 REMARK 230 FOR SHELL : 1.900 REMARK 230 REMARK 230 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 230 SOFTWARE USED : PHENIX REMARK 230 STARTING MODEL: NULL REMARK 230 REMARK 230 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18MG/ML PROTEIN, 0.2M CALCIUM ACETATE, REMARK 280 20% PEG 3350, 20MM HEPES, 50MM NACL, 20MM MGCL2, 0.1% N-OCTY-B-D- REMARK 280 GLUCOPYRANOSIDE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 107.19000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.59500 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.59500 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 107.19000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 O DOD A 354 LIES ON A SPECIAL POSITION. REMARK 375 O DOD A 356 LIES ON A SPECIAL POSITION. REMARK 375 O DOD A 374 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 62 REMARK 465 GLU A 63 REMARK 465 TYR A 64 REMARK 465 SER A 65 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 VAL A 29 CG1 CG2 REMARK 470 ASP A 30 CG OD1 OD2 REMARK 470 ILE A 36 CG1 CG2 CD1 REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 SER A 39 OG REMARK 470 GLN A 61 CG CD OE1 NE2 REMARK 470 MET A 67 CG SD CE REMARK 470 GLN A 70 CG CD OE1 NE2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 GLN A 95 CG CD OE1 NE2 REMARK 470 GLU A 98 CG CD OE1 OE2 REMARK 470 ARG A 102 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 ARG A 128 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 ASP A 132 CG OD1 OD2 REMARK 470 ARG A 135 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 154 CG OD1 OD2 REMARK 470 GLN A 165 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 DG SER A 127 OE2 GLU A 143 1.28 REMARK 500 D1 DOD A 346 O DOD A 362 1.34 REMARK 500 O ASP A 119 D2 DOD A 352 1.46 REMARK 500 D2 DOD A 346 O DOD A 349 1.50 REMARK 500 DH TYR A 40 O DOD A 305 1.50 REMARK 500 O TYR A 141 D2 DOD A 335 1.51 REMARK 500 O VAL A 29 DO2' GNP A 201 1.58 REMARK 500 OE1 GLU A 143 D2 DOD A 360 1.58 REMARK 500 DG SER A 17 OD2 ASP A 57 1.58 REMARK 500 D THR A 35 O1G GNP A 201 1.59 REMARK 500 D2 DOD A 332 O DOD A 363 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 54.94 -99.54 REMARK 500 GLU A 37 115.87 -169.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 75.9 REMARK 620 3 GNP A 201 O2B 91.7 165.0 REMARK 620 4 GNP A 201 O1G 155.0 92.7 95.5 REMARK 620 5 DOD A 303 O 83.7 77.2 93.4 72.0 REMARK 620 6 DOD A 304 O 91.3 101.8 86.6 112.9 175.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 DBREF 4RSG A 1 166 UNP P01112 RASH_HUMAN 1 166 SEQRES 1 A 166 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY GLY SEQRES 2 A 166 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 166 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 166 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 166 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 A 166 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 166 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 166 ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 166 ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 166 CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN ALA SEQRES 11 A 166 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE GLU SEQRES 12 A 166 THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA PHE SEQRES 13 A 166 TYR THR LEU VAL ARG GLU ILE ARG GLN HIS HET GNP A 201 46 HET MG A 202 1 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 2 GNP C10 H17 N6 O13 P3 FORMUL 3 MG MG 2+ FORMUL 4 DOD *75(D2 O) HELIX 1 1 GLY A 15 GLN A 25 1 11 HELIX 2 2 ARG A 68 GLY A 75 1 8 HELIX 3 3 ASN A 86 ASP A 92 1 7 HELIX 4 4 ASP A 92 ASP A 105 1 14 HELIX 5 5 GLU A 126 GLY A 138 1 13 HELIX 6 6 GLY A 151 HIS A 166 1 16 SHEET 1 A 6 GLU A 37 ILE A 46 0 SHEET 2 A 6 GLU A 49 THR A 58 -1 O ILE A 55 N TYR A 40 SHEET 3 A 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 A 6 GLY A 77 ALA A 83 1 O LEU A 79 N VAL A 7 SHEET 5 A 6 MET A 111 ASN A 116 1 O VAL A 114 N CYS A 80 SHEET 6 A 6 TYR A 141 GLU A 143 1 O ILE A 142 N GLY A 115 LINK OG SER A 17 MG MG A 202 1555 1555 2.14 LINK OG1 THR A 35 MG MG A 202 1555 1555 2.46 LINK O2B GNP A 201 MG MG A 202 1555 1555 2.07 LINK O1G GNP A 201 MG MG A 202 1555 1555 2.35 LINK MG MG A 202 O DOD A 303 1555 1555 2.22 LINK MG MG A 202 O DOD A 304 1555 1555 2.08 SITE 1 AC1 28 ALA A 11 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 28 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 28 VAL A 29 ASP A 30 PRO A 34 THR A 35 SITE 4 AC1 28 GLY A 60 ASN A 116 LYS A 117 ASP A 119 SITE 5 AC1 28 LEU A 120 SER A 145 ALA A 146 LYS A 147 SITE 6 AC1 28 MG A 202 DOD A 301 DOD A 303 DOD A 304 SITE 7 AC1 28 DOD A 306 DOD A 312 DOD A 341 DOD A 369 SITE 1 AC2 6 SER A 17 THR A 35 ASP A 57 GNP A 201 SITE 2 AC2 6 DOD A 303 DOD A 304 CRYST1 40.084 40.084 160.785 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024948 0.014404 0.000000 0.00000 SCALE2 0.000000 0.028807 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006219 0.00000 TER 2434 HIS A 166 HETATM 2435 PG GNP A 201 -5.193 14.551 -21.840 1.00 9.31 P HETATM 2436 O1G GNP A 201 -6.728 14.452 -21.462 1.00 12.25 O HETATM 2437 O2G GNP A 201 -5.090 14.640 -23.230 1.00 18.00 O HETATM 2438 O3G GNP A 201 -4.278 15.571 -21.150 1.00 15.01 O HETATM 2439 N3B GNP A 201 -4.611 12.945 -21.512 1.00 13.32 N HETATM 2440 PB GNP A 201 -3.816 12.564 -20.004 1.00 5.89 P HETATM 2441 O1B GNP A 201 -2.466 13.219 -20.064 1.00 12.14 O HETATM 2442 O2B GNP A 201 -4.929 13.094 -19.079 1.00 11.92 O HETATM 2443 O3A GNP A 201 -3.652 11.002 -20.112 1.00 6.88 O HETATM 2444 PA GNP A 201 -4.825 9.898 -19.654 1.00 9.13 P HETATM 2445 O1A GNP A 201 -4.707 9.944 -18.092 1.00 9.97 O HETATM 2446 O2A GNP A 201 -6.090 10.319 -20.321 1.00 6.24 O HETATM 2447 O5' GNP A 201 -4.205 8.569 -20.187 1.00 11.53 O HETATM 2448 C5' GNP A 201 -3.543 8.298 -21.351 1.00 6.70 C HETATM 2449 C4' GNP A 201 -3.319 6.842 -21.597 1.00 9.27 C HETATM 2450 O4' GNP A 201 -2.180 6.257 -20.945 1.00 11.15 O HETATM 2451 C3' GNP A 201 -4.555 5.972 -21.280 1.00 5.98 C HETATM 2452 O3' GNP A 201 -4.838 5.178 -22.402 1.00 20.95 O HETATM 2453 C2' GNP A 201 -4.170 5.413 -19.954 1.00 12.11 C HETATM 2454 O2' GNP A 201 -4.838 4.350 -19.264 1.00 16.85 O HETATM 2455 C1' GNP A 201 -2.581 5.457 -19.941 1.00 10.49 C HETATM 2456 N9 GNP A 201 -1.773 5.496 -18.743 1.00 14.77 N HETATM 2457 C8 GNP A 201 -1.890 6.470 -17.880 1.00 11.82 C HETATM 2458 N7 GNP A 201 -1.084 6.312 -16.856 1.00 14.77 N HETATM 2459 C5 GNP A 201 -0.458 5.227 -17.093 1.00 13.86 C HETATM 2460 C6 GNP A 201 0.560 4.449 -16.442 1.00 16.13 C HETATM 2461 O6 GNP A 201 0.924 4.910 -15.409 1.00 13.44 O HETATM 2462 N1 GNP A 201 1.054 3.385 -16.896 1.00 14.95 N HETATM 2463 C2 GNP A 201 0.591 2.888 -18.089 1.00 12.85 C HETATM 2464 N2 GNP A 201 1.104 1.752 -18.562 1.00 17.51 N HETATM 2465 N3 GNP A 201 -0.378 3.514 -18.819 1.00 12.28 N HETATM 2466 C4 GNP A 201 -0.911 4.657 -18.367 1.00 18.03 C HETATM 2467 DOG2 GNP A 201 -4.220 14.350 -23.480 1.00 21.60 D HETATM 2468 DNB3 GNP A 201 -4.638 12.314 -22.176 1.00 15.99 D HETATM 2469 H5'2 GNP A 201 -4.064 8.664 -22.100 1.00 8.04 H HETATM 2470 H5'1 GNP A 201 -2.670 8.749 -21.327 1.00 8.04 H HETATM 2471 H4' GNP A 201 -3.158 6.751 -22.563 1.00 11.13 H HETATM 2472 H3' GNP A 201 -5.321 6.570 -21.140 1.00 7.17 H HETATM 2473 DO3' GNP A 201 -5.612 5.410 -22.779 1.00 25.14 D HETATM 2474 H2' GNP A 201 -4.391 6.162 -19.360 1.00 14.54 H HETATM 2475 DO2' GNP A 201 -5.490 4.672 -18.757 1.00 20.22 D HETATM 2476 H1' GNP A 201 -2.361 4.562 -20.283 1.00 12.59 H HETATM 2477 H8 GNP A 201 -2.520 7.220 -17.970 1.00 14.18 H HETATM 2478 DN1 GNP A 201 1.698 2.933 -16.423 1.00 17.94 D HETATM 2479 DN21 GNP A 201 1.566 1.190 -18.004 1.00 21.01 D HETATM 2480 DN22 GNP A 201 0.995 1.532 -19.446 1.00 21.01 D HETATM 2481 MG MG A 202 -6.766 14.051 -19.144 1.00 13.29 MG HETATM 2482 O DOD A 301 -6.875 9.751 -23.209 1.00 18.57 O HETATM 2483 D1 DOD A 301 -6.652 9.848 -22.291 1.00 22.29 D HETATM 2484 D2 DOD A 301 -6.583 10.543 -23.647 1.00 22.29 D HETATM 2485 O DOD A 302 -11.111 12.838 -18.817 1.00 26.65 O HETATM 2486 D1 DOD A 302 -10.768 12.434 -19.605 1.00 31.98 D HETATM 2487 D2 DOD A 302 -10.597 12.505 -18.092 1.00 31.98 D HETATM 2488 O DOD A 303 -7.764 12.349 -20.151 1.00 14.76 O HETATM 2489 D1 DOD A 303 -8.562 12.074 -20.587 1.00 17.72 D HETATM 2490 D2 DOD A 303 -7.180 11.600 -20.147 1.00 17.72 D HETATM 2491 O DOD A 304 -5.876 15.571 -18.045 1.00 10.31 O HETATM 2492 D1 DOD A 304 -5.806 16.480 -18.311 1.00 12.37 D HETATM 2493 D2 DOD A 304 -5.769 15.553 -17.101 1.00 12.37 D HETATM 2494 O DOD A 305 -10.647 13.693 -15.047 1.00 22.88 O HETATM 2495 D1 DOD A 305 -9.758 13.909 -15.304 1.00 27.46 D HETATM 2496 D2 DOD A 305 -11.225 14.144 -15.652 1.00 27.46 D HETATM 2497 O DOD A 306 -6.561 16.893 -23.173 1.00 16.20 O HETATM 2498 O DOD A 307 -13.462 17.175 -19.700 1.00 22.23 O HETATM 2499 D1 DOD A 307 -13.072 16.327 -19.876 1.00 26.68 D HETATM 2500 D2 DOD A 307 -13.466 17.283 -18.756 1.00 26.68 D HETATM 2501 O DOD A 308 -7.515 22.361 8.621 1.00 19.75 O HETATM 2502 D1 DOD A 308 -7.701 21.554 8.155 1.00 23.70 D HETATM 2503 D2 DOD A 308 -7.567 22.162 9.548 1.00 23.70 D HETATM 2504 O DOD A 309 -15.020 14.326 0.526 1.00 18.06 O HETATM 2505 O DOD A 310 11.632 33.710 -14.932 1.00 17.96 O HETATM 2506 O DOD A 311 -6.372 6.054 -13.396 1.00 17.26 O HETATM 2507 D1 DOD A 311 -6.892 5.540 -12.789 1.00 20.71 D HETATM 2508 D2 DOD A 311 -6.118 6.846 -12.938 1.00 20.71 D HETATM 2509 O DOD A 312 -8.104 8.392 -19.933 1.00 24.61 O HETATM 2510 D1 DOD A 312 -7.331 8.930 -20.051 1.00 29.54 D HETATM 2511 D2 DOD A 312 -7.992 7.625 -20.482 1.00 29.54 D HETATM 2512 O DOD A 313 0.525 17.613 -26.281 1.00 10.31 O HETATM 2513 O DOD A 314 3.014 13.752 -26.168 1.00 34.83 O HETATM 2514 D1 DOD A 314 3.487 14.576 -26.135 1.00 41.80 D HETATM 2515 D2 DOD A 314 2.113 13.946 -25.936 1.00 41.80 D HETATM 2516 O DOD A 315 -6.364 27.577 -0.316 1.00 22.52 O HETATM 2517 D1 DOD A 315 -5.657 27.627 -0.948 1.00 27.02 D HETATM 2518 D2 DOD A 315 -6.210 26.800 0.207 1.00 27.02 D HETATM 2519 O DOD A 316 -3.097 26.577 1.092 1.00 10.49 O HETATM 2520 O DOD A 317 -12.599 7.846 -2.484 1.00 20.86 O HETATM 2521 O DOD A 318 -11.052 10.386 2.590 1.00 12.24 O HETATM 2522 O DOD A 319 -1.399 20.450 -19.288 1.00 18.15 O HETATM 2523 D1 DOD A 319 -2.151 20.635 -18.738 1.00 21.77 D HETATM 2524 D2 DOD A 319 -1.708 20.451 -20.186 1.00 21.77 D HETATM 2525 O DOD A 320 3.524 7.725 -22.788 1.00 22.30 O HETATM 2526 D1 DOD A 320 4.128 7.077 -22.446 1.00 26.76 D HETATM 2527 D2 DOD A 320 3.201 7.391 -23.617 1.00 26.76 D HETATM 2528 O DOD A 321 -9.392 8.720 -2.129 1.00 13.99 O HETATM 2529 O DOD A 322 -13.893 6.596 -23.457 1.00 30.19 O HETATM 2530 O DOD A 323 1.573 11.215 -24.999 1.00 12.54 O HETATM 2531 O DOD A 324 16.351 5.112 -16.120 1.00 16.56 O HETATM 2532 D1 DOD A 324 16.587 4.883 -17.010 1.00 19.87 D HETATM 2533 D2 DOD A 324 16.408 4.315 -15.607 1.00 19.87 D HETATM 2534 O DOD A 325 8.051 22.876 -4.886 1.00 16.33 O HETATM 2535 D1 DOD A 325 8.823 22.377 -5.128 1.00 19.60 D HETATM 2536 D2 DOD A 325 8.250 23.314 -4.067 1.00 19.60 D HETATM 2537 O DOD A 326 8.155 26.102 -2.431 1.00 19.95 O HETATM 2538 D1 DOD A 326 8.544 25.917 -3.277 1.00 23.94 D HETATM 2539 D2 DOD A 326 7.705 26.936 -2.512 1.00 23.94 D HETATM 2540 O DOD A 327 4.638 16.713 -20.541 1.00 11.88 O HETATM 2541 D1 DOD A 327 5.588 16.698 -20.540 1.00 14.26 D HETATM 2542 D2 DOD A 327 4.359 16.515 -19.655 1.00 14.26 D HETATM 2543 O DOD A 328 12.429 27.452 -14.520 1.00 26.27 O HETATM 2544 D1 DOD A 328 13.379 27.456 -14.490 1.00 31.53 D HETATM 2545 D2 DOD A 328 12.184 27.257 -15.418 1.00 31.53 D HETATM 2546 O DOD A 329 9.343 25.998 -8.581 1.00 22.68 O HETATM 2547 D1 DOD A 329 8.460 25.927 -8.240 1.00 27.22 D HETATM 2548 D2 DOD A 329 9.932 25.808 -7.859 1.00 27.22 D HETATM 2549 O DOD A 330 9.541 34.630 -7.002 1.00 19.08 O HETATM 2550 O DOD A 331 -4.189 -2.164 -12.699 1.00 19.41 O HETATM 2551 O DOD A 332 12.299 1.512 -12.838 1.00 34.09 O HETATM 2552 D1 DOD A 332 11.967 2.206 -12.280 1.00 40.91 D HETATM 2553 D2 DOD A 332 11.852 1.594 -13.672 1.00 40.91 D HETATM 2554 O DOD A 333 0.395 18.498 8.828 1.00 20.44 O HETATM 2555 D1 DOD A 333 -0.424 18.018 8.857 1.00 24.53 D HETATM 2556 D2 DOD A 333 1.076 17.897 9.108 1.00 24.53 D HETATM 2557 O DOD A 334 14.334 15.508 -5.712 1.00 11.44 O HETATM 2558 O DOD A 335 13.618 12.663 -6.322 1.00 20.34 O HETATM 2559 D1 DOD A 335 14.248 12.603 -7.030 1.00 24.41 D HETATM 2560 D2 DOD A 335 12.759 12.722 -6.724 1.00 24.41 D HETATM 2561 O DOD A 336 8.466 7.191 -6.781 1.00 21.34 O HETATM 2562 D1 DOD A 336 9.264 7.708 -6.807 1.00 25.61 D HETATM 2563 D2 DOD A 336 8.062 7.267 -7.638 1.00 25.61 D HETATM 2564 O DOD A 337 7.028 6.051 -4.296 1.00 23.30 O HETATM 2565 D1 DOD A 337 7.064 6.865 -3.808 1.00 27.96 D HETATM 2566 D2 DOD A 337 7.461 6.208 -5.125 1.00 27.96 D HETATM 2567 O DOD A 338 7.266 14.895 0.769 1.00 11.70 O HETATM 2568 O DOD A 339 10.480 3.742 -8.626 1.00 16.26 O HETATM 2569 O DOD A 340 11.305 1.467 -17.213 1.00 27.71 O HETATM 2570 D1 DOD A 340 10.445 1.147 -17.459 1.00 33.25 D HETATM 2571 D2 DOD A 340 11.912 1.157 -17.876 1.00 33.25 D HETATM 2572 O DOD A 341 -0.282 3.768 -21.608 1.00 13.52 O HETATM 2573 O DOD A 342 9.325 25.120 -5.333 1.00 25.83 O HETATM 2574 D1 DOD A 342 10.061 24.651 -4.958 1.00 31.00 D HETATM 2575 D2 DOD A 342 9.558 26.042 -5.331 1.00 31.00 D HETATM 2576 O DOD A 343 12.597 21.654 -2.958 1.00 22.62 O HETATM 2577 D1 DOD A 343 12.706 22.078 -3.801 1.00 27.14 D HETATM 2578 D2 DOD A 343 11.671 21.684 -2.753 1.00 27.14 D HETATM 2579 O DOD A 344 2.181 -2.599 -17.988 1.00 30.99 O HETATM 2580 D1 DOD A 344 2.684 -2.229 -17.272 1.00 37.19 D HETATM 2581 D2 DOD A 344 2.538 -2.238 -18.790 1.00 37.19 D HETATM 2582 O DOD A 345 -13.792 22.749 -7.661 1.00 28.97 O HETATM 2583 D1 DOD A 345 -12.854 22.665 -7.539 1.00 34.76 D HETATM 2584 D2 DOD A 345 -14.012 23.655 -7.476 1.00 34.76 D HETATM 2585 O DOD A 346 2.316 4.280 -23.540 1.00 24.96 O HETATM 2586 D1 DOD A 346 2.423 3.442 -23.976 1.00 29.95 D HETATM 2587 D2 DOD A 346 2.022 4.897 -24.198 1.00 29.95 D HETATM 2588 O DOD A 347 10.328 23.306 0.394 1.00 17.31 O HETATM 2589 O DOD A 348 -2.882 22.328 -22.653 1.00 29.07 O HETATM 2590 D1 DOD A 348 -2.016 21.970 -22.807 1.00 34.88 D HETATM 2591 D2 DOD A 348 -3.339 21.711 -22.095 1.00 34.88 D HETATM 2592 O DOD A 349 1.142 5.818 -24.995 1.00 36.79 O HETATM 2593 D1 DOD A 349 1.465 5.854 -25.887 1.00 44.14 D HETATM 2594 D2 DOD A 349 0.556 6.558 -24.883 1.00 44.14 D HETATM 2595 O DOD A 350 3.077 -4.647 -15.291 1.00 31.65 O HETATM 2596 D1 DOD A 350 2.871 -4.080 -16.027 1.00 37.98 D HETATM 2597 D2 DOD A 350 3.964 -4.436 -15.023 1.00 37.98 D HETATM 2598 O DOD A 351 14.635 1.429 -22.572 1.00 14.16 O HETATM 2599 O DOD A 352 8.505 -1.786 -16.196 1.00 33.12 O HETATM 2600 D1 DOD A 352 8.800 -0.975 -16.595 1.00 39.74 D HETATM 2601 D2 DOD A 352 7.590 -1.889 -16.430 1.00 39.74 D HETATM 2602 O DOD A 353 -0.073 22.669 7.129 1.00 14.68 O HETATM 2603 O DOD A 354 6.562 11.366 0.000 0.50 14.05 O HETATM 2604 O DOD A 355 -15.014 14.019 -17.514 1.00 23.79 O HETATM 2605 O DOD A 356 10.392 18.000 0.000 0.50 14.29 O HETATM 2606 O DOD A 357 1.524 26.519 6.017 1.00 25.67 O HETATM 2607 D1 DOD A 357 2.350 26.226 5.650 1.00 30.80 D HETATM 2608 D2 DOD A 357 0.917 25.792 5.945 1.00 30.80 D HETATM 2609 O DOD A 358 17.415 9.073 -21.994 1.00 13.82 O HETATM 2610 O DOD A 359 -1.351 -2.150 -8.246 1.00 31.44 O HETATM 2611 D1 DOD A 359 -0.802 -1.377 -8.220 1.00 37.73 D HETATM 2612 D2 DOD A 359 -0.992 -2.721 -8.915 1.00 37.73 D HETATM 2613 O DOD A 360 10.966 3.804 -11.249 1.00 24.96 O HETATM 2614 D1 DOD A 360 10.736 3.977 -10.344 1.00 29.96 D HETATM 2615 D2 DOD A 360 11.104 4.648 -11.664 1.00 29.96 D HETATM 2616 O DOD A 361 20.979 15.671 -18.518 1.00 30.75 O HETATM 2617 D1 DOD A 361 21.403 16.259 -19.133 1.00 36.90 D HETATM 2618 D2 DOD A 361 20.060 15.911 -18.499 1.00 36.90 D HETATM 2619 O DOD A 362 2.741 2.150 -24.103 1.00 34.15 O HETATM 2620 D1 DOD A 362 3.606 1.882 -24.389 1.00 40.98 D HETATM 2621 D2 DOD A 362 2.118 1.589 -24.550 1.00 40.98 D HETATM 2622 O DOD A 363 10.772 2.111 -14.731 1.00 28.85 O HETATM 2623 D1 DOD A 363 11.006 1.842 -15.611 1.00 34.61 D HETATM 2624 D2 DOD A 363 9.824 2.073 -14.675 1.00 34.61 D HETATM 2625 O DOD A 364 18.273 16.835 -18.375 1.00 23.84 O HETATM 2626 O DOD A 365 -15.516 16.274 -6.651 1.00 24.33 O HETATM 2627 D1 DOD A 365 -15.376 15.870 -7.500 1.00 29.19 D HETATM 2628 D2 DOD A 365 -15.590 17.209 -6.800 1.00 29.19 D HETATM 2629 O DOD A 366 9.606 12.323 -28.218 1.00 16.57 O HETATM 2630 O DOD A 367 13.727 21.713 -20.553 1.00 25.47 O HETATM 2631 D1 DOD A 367 14.118 20.852 -20.475 1.00 30.56 D HETATM 2632 D2 DOD A 367 13.517 22.001 -19.673 1.00 30.56 D HETATM 2633 O DOD A 368 -3.559 7.243 2.377 1.00 13.77 O HETATM 2634 O DOD A 369 -2.980 4.165 -24.591 1.00 16.90 O HETATM 2635 O DOD A 370 5.916 -3.698 -19.082 1.00 17.65 O HETATM 2636 O DOD A 371 16.664 19.101 -20.162 1.00 8.40 O HETATM 2637 O DOD A 372 11.387 26.908 -16.885 1.00 13.84 O HETATM 2638 O DOD A 373 -8.607 17.278 -24.590 1.00 11.52 O HETATM 2639 O DOD A 374 13.451 23.297 0.000 0.50 11.92 O HETATM 2640 O DOD A 375 -11.316 24.967 -10.760 1.00 10.26 O CONECT 233 2481 CONECT 511 2481 CONECT 2435 2436 2437 2438 2439 CONECT 2436 2435 2481 CONECT 2437 2435 CONECT 2438 2435 CONECT 2439 2435 2440 CONECT 2440 2439 2441 2442 2443 CONECT 2441 2440 CONECT 2442 2440 2481 CONECT 2443 2440 2444 CONECT 2444 2443 2445 2446 2447 CONECT 2445 2444 CONECT 2446 2444 CONECT 2447 2444 2448 CONECT 2448 2447 2449 2469 2470 CONECT 2449 2448 2450 2451 2471 CONECT 2450 2449 2455 CONECT 2451 2449 2452 2453 2472 CONECT 2452 2451 CONECT 2453 2451 2454 2455 2474 CONECT 2454 2453 CONECT 2455 2450 2453 2456 2476 CONECT 2456 2455 2457 2466 CONECT 2457 2456 2458 2477 CONECT 2458 2457 2459 CONECT 2459 2458 2460 2466 CONECT 2460 2459 2461 2462 CONECT 2461 2460 CONECT 2462 2460 2463 CONECT 2463 2462 2464 2465 CONECT 2464 2463 CONECT 2465 2463 2466 CONECT 2466 2456 2459 2465 CONECT 2469 2448 CONECT 2470 2448 CONECT 2471 2449 CONECT 2472 2451 CONECT 2474 2453 CONECT 2476 2455 CONECT 2477 2457 CONECT 2481 233 511 2436 2442 CONECT 2481 2488 2491 CONECT 2488 2481 CONECT 2491 2481 MASTER 313 0 2 6 6 0 9 6 1315 1 45 13 END