data_4RT3 # _entry.id 4RT3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RT3 pdb_00004rt3 10.2210/pdb4rt3/pdb RCSB RCSB087761 ? ? NDB NA3299 ? ? WWPDB D_1000087761 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4RT2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4RT3 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-11-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Batra, V.K.' 1 'Wilson, S.H.' 2 # _citation.id primary _citation.title ;Two Scaffolds from Two Flips: (alpha, beta)/(beta, gamma) CH2/NH "Met-Im" Analogues of dTTP. ; _citation.journal_abbrev Org.Lett. _citation.journal_volume 17 _citation.page_first 2586 _citation.page_last 2589 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1523-7060 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25970636 _citation.pdbx_database_id_DOI 10.1021/acs.orglett.5b00799 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kadina, A.P.' 1 ? primary 'Kashemirov, B.A.' 2 ? primary 'Oertell, K.' 3 ? primary 'Batra, V.K.' 4 ? primary 'Wilson, S.H.' 5 ? primary 'Goodman, M.F.' 6 ? primary 'McKenna, C.E.' 7 ? # _cell.length_a 50.735 _cell.length_b 79.909 _cell.length_c 55.337 _cell.angle_alpha 90.000 _cell.angle_beta 107.520 _cell.angle_gamma 90.000 _cell.entry_id 4RT3 _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4RT3 _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 38241.672 1 '2.7.7.7, 4.2.99.-' ? ? ? 2 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4853.158 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3') ; 3045.005 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 7 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 8 non-polymer syn "2'-deoxy-5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]amino}phosphoryl]-3,4-dihydrothymidine" 479.211 1 ? ? ? ? 9 water nat water 18.015 328 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 'Template Strand' 3 'Primer Strand' 4 'Downstream Primer Strand' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DA)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACAGCGCATCAGC T ? 3 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DOC)' GCTGATGCGC P ? 4 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PRO n 1 8 GLN n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 THR n 1 17 ASP n 1 18 MET n 1 19 LEU n 1 20 THR n 1 21 GLU n 1 22 LEU n 1 23 ALA n 1 24 ASN n 1 25 PHE n 1 26 GLU n 1 27 LYS n 1 28 ASN n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 ALA n 1 33 ILE n 1 34 HIS n 1 35 LYS n 1 36 TYR n 1 37 ASN n 1 38 ALA n 1 39 TYR n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 LYS n 1 49 TYR n 1 50 PRO n 1 51 HIS n 1 52 LYS n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LYS n 1 61 LYS n 1 62 LEU n 1 63 PRO n 1 64 GLY n 1 65 VAL n 1 66 GLY n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ALA n 1 71 GLU n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 THR n 1 80 GLY n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 LEU n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 GLN n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 SER n 1 95 SER n 1 96 SER n 1 97 ILE n 1 98 ASN n 1 99 PHE n 1 100 LEU n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 SER n 1 105 GLY n 1 106 ILE n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 LYS n 1 114 PHE n 1 115 VAL n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 GLU n 1 124 ASP n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLU n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 ASN n 1 134 HIS n 1 135 HIS n 1 136 GLN n 1 137 ARG n 1 138 ILE n 1 139 GLY n 1 140 LEU n 1 141 LYS n 1 142 TYR n 1 143 PHE n 1 144 GLY n 1 145 ASP n 1 146 PHE n 1 147 GLU n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 PRO n 1 152 ARG n 1 153 GLU n 1 154 GLU n 1 155 MET n 1 156 LEU n 1 157 GLN n 1 158 MET n 1 159 GLN n 1 160 ASP n 1 161 ILE n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 GLU n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 SER n 1 172 GLU n 1 173 TYR n 1 174 ILE n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 ARG n 1 184 GLY n 1 185 ALA n 1 186 GLU n 1 187 SER n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 MET n 1 192 ASP n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 THR n 1 197 HIS n 1 198 PRO n 1 199 SER n 1 200 PHE n 1 201 THR n 1 202 SER n 1 203 GLU n 1 204 SER n 1 205 THR n 1 206 LYS n 1 207 GLN n 1 208 PRO n 1 209 LYS n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 GLN n 1 214 VAL n 1 215 VAL n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 GLN n 1 220 LYS n 1 221 VAL n 1 222 HIS n 1 223 PHE n 1 224 ILE n 1 225 THR n 1 226 ASP n 1 227 THR n 1 228 LEU n 1 229 SER n 1 230 LYS n 1 231 GLY n 1 232 GLU n 1 233 THR n 1 234 LYS n 1 235 PHE n 1 236 MET n 1 237 GLY n 1 238 VAL n 1 239 CYS n 1 240 GLN n 1 241 LEU n 1 242 PRO n 1 243 SER n 1 244 LYS n 1 245 ASN n 1 246 ASP n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 TYR n 1 251 PRO n 1 252 HIS n 1 253 ARG n 1 254 ARG n 1 255 ILE n 1 256 ASP n 1 257 ILE n 1 258 ARG n 1 259 LEU n 1 260 ILE n 1 261 PRO n 1 262 LYS n 1 263 ASP n 1 264 GLN n 1 265 TYR n 1 266 TYR n 1 267 CYS n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 TYR n 1 272 PHE n 1 273 THR n 1 274 GLY n 1 275 SER n 1 276 ASP n 1 277 ILE n 1 278 PHE n 1 279 ASN n 1 280 LYS n 1 281 ASN n 1 282 MET n 1 283 ARG n 1 284 ALA n 1 285 HIS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 LYS n 1 290 GLY n 1 291 PHE n 1 292 THR n 1 293 ILE n 1 294 ASN n 1 295 GLU n 1 296 TYR n 1 297 THR n 1 298 ILE n 1 299 ARG n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ALA n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 LEU n 1 312 PRO n 1 313 VAL n 1 314 ASP n 1 315 SER n 1 316 GLU n 1 317 LYS n 1 318 ASP n 1 319 ILE n 1 320 PHE n 1 321 ASP n 1 322 TYR n 1 323 ILE n 1 324 GLN n 1 325 TRP n 1 326 LYS n 1 327 TYR n 1 328 ARG n 1 329 GLU n 1 330 PRO n 1 331 LYS n 1 332 ASP n 1 333 ARG n 1 334 SER n 1 335 GLU n 2 1 DC n 2 2 DC n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DA n 2 7 DG n 2 8 DC n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DT n 2 13 DC n 2 14 DA n 2 15 DG n 2 16 DC n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DOC n 4 1 DG n 4 2 DT n 4 3 DC n 4 4 DG n 4 5 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pWL11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 ? 3 1 sample ? ? 'synthetic construct' ? 32630 ? 4 1 sample ? ? 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 4RT3 4RT3 2 ? ? ? 3 PDB 4RT3 4RT3 3 ? ? ? 4 PDB 4RT3 4RT3 4 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RT3 A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 4RT3 T 1 ? 16 ? 4RT3 1 ? 16 ? 1 16 3 3 4RT3 P 1 ? 10 ? 4RT3 1 ? 10 ? 1 10 4 4 4RT3 D 1 ? 5 ? 4RT3 1 ? 5 ? 1 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C6T non-polymer . "2'-deoxy-5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]amino}phosphoryl]-3,4-dihydrothymidine" ? 'C11 H20 N3 O12 P3' 479.211 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4RT3 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.24 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '50 mM Imidazole, pH 7.5, 350 mM Sodium Acetate, 18 % PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 92' _diffrn_detector.pdbx_collection_date 2014-02-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Mirror Viramax' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.d_resolution_high 1.920 _reflns.d_resolution_low 50.000 _reflns.number_obs 28973 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_netI_over_sigmaI 16.600 _reflns.pdbx_chi_squared 1.306 _reflns.pdbx_redundancy 3.300 _reflns.percent_possible_obs 89.800 _reflns.entry_id 4RT3 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 28973 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.920 1.990 ? ? ? 0.479 ? ? 1.560 2.000 ? 1547 48.000 1 1 1.990 2.070 ? ? ? 0.334 ? ? 1.523 2.300 ? 2106 65.900 2 1 2.070 2.160 ? ? ? 0.256 ? ? 1.327 2.800 ? 2757 85.700 3 1 2.160 2.280 ? ? ? 0.223 ? ? 1.312 3.400 ? 3195 100.000 4 1 2.280 2.420 ? ? ? 0.186 ? ? 1.250 3.600 ? 3243 100.000 5 1 2.420 2.610 ? ? ? 0.155 ? ? 1.415 3.600 ? 3192 99.900 6 1 2.610 2.870 ? ? ? 0.123 ? ? 1.475 3.600 ? 3233 99.900 7 1 2.870 3.280 ? ? ? 0.087 ? ? 1.329 3.600 ? 3210 99.900 8 1 3.280 4.140 ? ? ? 0.064 ? ? 1.158 3.700 ? 3233 99.800 9 1 4.140 50.000 ? ? ? 0.056 ? ? 1.090 3.700 ? 3257 98.500 10 1 # _refine.entry_id 4RT3 _refine.ls_d_res_high 1.92 _refine.ls_d_res_low 22.2580 _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 89.5500 _refine.ls_number_reflns_obs 28875 _refine.ls_number_reflns_all 28973 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1829 _refine.ls_R_factor_R_work 0.1798 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2256 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 6.9200 _refine.ls_number_reflns_R_free 1999 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 35.2626 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2000 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB entry 2FMS' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 69.680 _refine.B_iso_min 6.540 _refine.pdbx_overall_phase_error 25.9400 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2608 _refine_hist.pdbx_number_atoms_nucleic_acid 630 _refine_hist.pdbx_number_atoms_ligand 36 _refine_hist.number_atoms_solvent 328 _refine_hist.number_atoms_total 3602 _refine_hist.d_res_high 1.92 _refine_hist.d_res_low 22.2580 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 3392 0.008 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 4703 1.039 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 513 0.044 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 496 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 1329 20.046 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.92 1.9672 14 46.0000 971 . 0.3139 0.3473 . 72 . 1043 . . 'X-RAY DIFFRACTION' 1.9672 2.0203 14 57.0000 1227 . 0.2331 0.2716 . 91 . 1318 . . 'X-RAY DIFFRACTION' 2.0203 2.0797 14 71.0000 1500 . 0.2292 0.2910 . 111 . 1611 . . 'X-RAY DIFFRACTION' 2.0797 2.1468 14 85.0000 1825 . 0.2140 0.2504 . 136 . 1961 . . 'X-RAY DIFFRACTION' 2.1468 2.2235 14 99.0000 2122 . 0.2071 0.2838 . 157 . 2279 . . 'X-RAY DIFFRACTION' 2.2235 2.3124 14 100.0000 2153 . 0.2052 0.2585 . 160 . 2313 . . 'X-RAY DIFFRACTION' 2.3124 2.4175 14 100.0000 2134 . 0.2085 0.2393 . 159 . 2293 . . 'X-RAY DIFFRACTION' 2.4175 2.5448 14 100.0000 2111 . 0.2117 0.2770 . 156 . 2267 . . 'X-RAY DIFFRACTION' 2.5448 2.7040 14 100.0000 2121 . 0.2178 0.2507 . 159 . 2280 . . 'X-RAY DIFFRACTION' 2.7040 2.9124 14 99.0000 2115 . 0.2297 0.2696 . 158 . 2273 . . 'X-RAY DIFFRACTION' 2.9124 3.2047 14 99.0000 2117 . 0.2135 0.2683 . 159 . 2276 . . 'X-RAY DIFFRACTION' 3.2047 3.6666 14 100.0000 2158 . 0.1591 0.2046 . 160 . 2318 . . 'X-RAY DIFFRACTION' 3.6666 4.6128 14 99.0000 2159 . 0.1350 0.1731 . 161 . 2320 . . 'X-RAY DIFFRACTION' 4.6128 22.2597 14 99.0000 2163 . 0.1447 0.1900 . 160 . 2323 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4RT3 _struct.title 'Ternary complex crystal structure of DNA polymerase Beta with (alpha, beta)-NH-(beta,gamma)-CH2-dTTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RT3 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'DNA Polymerase Beta, Ternary complex, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 7 ? K N N 7 ? L N N 8 ? M N N 9 ? N N N 9 ? O N N 9 ? P N N 9 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 12 ? VAL A 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 32 ? LYS A 48 ? ALA A 32 LYS A 48 1 ? 17 HELX_P HELX_P3 3 SER A 55 ? LYS A 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 66 ? GLY A 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP A 91 ? THR A 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY A 107 ? GLU A 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 121 ? ASN A 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU A 129 ? LEU A 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN A 133 ? TYR A 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 142 ? GLU A 147 ? TYR A 142 GLU A 147 1 ? 6 HELX_P HELX_P12 12 ARG A 152 ? ASP A 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 13 CYS A 178 ? ARG A 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 LYS A 209 ? VAL A 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO A 261 ? ASP A 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 275 ? LYS A 289 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 18 SER A 315 ? ILE A 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU A 329 ? ARG A 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DG 9 "O3'" ? ? ? 1_555 C DOC 10 P ? ? P DG 9 P DOC 10 1_555 ? ? ? ? ? ? ? 1.601 ? ? metalc1 metalc ? ? A LYS 60 O ? ? ? 1_555 H NA . NA ? ? A LYS 60 A NA 404 1_555 ? ? ? ? ? ? ? 2.438 ? ? metalc2 metalc ? ? A LEU 62 O ? ? ? 1_555 H NA . NA ? ? A LEU 62 A NA 404 1_555 ? ? ? ? ? ? ? 2.439 ? ? metalc3 metalc ? ? A VAL 65 O ? ? ? 1_555 H NA . NA ? ? A VAL 65 A NA 404 1_555 ? ? ? ? ? ? ? 2.442 ? ? metalc4 metalc ? ? A THR 101 O ? ? ? 1_555 G NA . NA ? ? A THR 101 A NA 403 1_555 ? ? ? ? ? ? ? 2.288 ? ? metalc5 metalc ? ? A VAL 103 O ? ? ? 1_555 G NA . NA ? ? A VAL 103 A NA 403 1_555 ? ? ? ? ? ? ? 2.496 ? ? metalc6 metalc ? ? A ILE 106 O ? ? ? 1_555 G NA . NA ? ? A ILE 106 A NA 403 1_555 ? ? ? ? ? ? ? 2.492 ? ? metalc7 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 401 1_555 ? ? ? ? ? ? ? 1.977 ? ? metalc8 metalc ? ? A ASP 190 OD2 ? ? ? 1_555 F NA . NA ? ? A ASP 190 A NA 402 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc9 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 F NA . NA ? ? A ASP 190 A NA 402 1_555 ? ? ? ? ? ? ? 3.074 ? ? metalc10 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 192 A MG 401 1_555 ? ? ? ? ? ? ? 1.980 ? ? metalc11 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F NA . NA ? ? A ASP 192 A NA 402 1_555 ? ? ? ? ? ? ? 2.060 ? ? metalc12 metalc ? ? A ASP 256 OD2 ? ? ? 1_555 F NA . NA ? ? A ASP 256 A NA 402 1_555 ? ? ? ? ? ? ? 2.058 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 L C6T . O2B ? ? A MG 401 A C6T 408 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc14 metalc ? ? E MG . MG ? ? ? 1_555 L C6T . O3G ? ? A MG 401 A C6T 408 1_555 ? ? ? ? ? ? ? 2.090 ? ? metalc15 metalc ? ? E MG . MG ? ? ? 1_555 L C6T . O1A ? ? A MG 401 A C6T 408 1_555 ? ? ? ? ? ? ? 2.101 ? ? metalc16 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 401 A HOH 501 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc17 metalc ? ? F NA . NA ? ? ? 1_555 L C6T . O1A ? ? A NA 402 A C6T 408 1_555 ? ? ? ? ? ? ? 2.259 ? ? metalc18 metalc ? ? F NA . NA ? ? ? 1_555 O HOH . O ? ? A NA 402 P HOH 501 1_555 ? ? ? ? ? ? ? 2.155 ? ? metalc19 metalc ? ? G NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 403 A HOH 535 1_555 ? ? ? ? ? ? ? 2.536 ? ? metalc20 metalc ? ? G NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 403 P DG 9 1_555 ? ? ? ? ? ? ? 2.606 ? ? metalc21 metalc ? ? G NA . NA ? ? ? 1_555 O HOH . O ? ? A NA 403 P HOH 502 1_555 ? ? ? ? ? ? ? 2.493 ? ? metalc22 metalc ? ? H NA . NA ? ? ? 1_555 D DC 3 OP1 ? ? A NA 404 D DC 3 1_555 ? ? ? ? ? ? ? 2.611 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 D DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 D DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 D DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N1 ? ? ? 1_555 D DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 4 N6 ? ? ? 1_555 D DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DOC 10 N3 ? ? T DG 7 P DOC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DOC 10 O2 ? ? T DG 7 P DOC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DOC 10 N4 ? ? T DG 7 P DOC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 11 N1 ? ? ? 1_555 C DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 11 N6 ? ? ? 1_555 C DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DA 14 N1 ? ? ? 1_555 C DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DA 14 N6 ? ? ? 1_555 C DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DC 16 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DC 16 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DC 16 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.16 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 150 ? PRO A 151 ? ILE A 150 PRO A 151 A 2 SER A 187 ? SER A 188 ? SER A 187 SER A 188 B 1 ILE A 174 ? VAL A 177 ? ILE A 174 VAL A 177 B 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196 B 3 ARG A 253 ? LEU A 259 ? ARG A 253 LEU A 259 B 4 LYS A 234 ? CYS A 239 ? LYS A 234 CYS A 239 B 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230 C 1 PHE A 291 ? ILE A 293 ? PHE A 291 ILE A 293 C 2 ILE A 298 ? PRO A 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 150 ? N ILE A 150 O SER A 188 ? O SER A 188 B 1 2 N THR A 176 ? N THR A 176 O LEU A 194 ? O LEU A 194 B 2 3 N LEU A 195 ? N LEU A 195 O ARG A 258 ? O ARG A 258 B 3 4 O ARG A 253 ? O ARG A 253 N CYS A 239 ? N CYS A 239 B 4 5 O MET A 236 ? O MET A 236 N SER A 229 ? N SER A 229 C 1 2 N THR A 292 ? N THR A 292 O ARG A 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 5 'BINDING SITE FOR RESIDUE MG A 401' AC2 Software A NA 402 ? 6 'BINDING SITE FOR RESIDUE NA A 402' AC3 Software A NA 403 ? 6 'BINDING SITE FOR RESIDUE NA A 403' AC4 Software A NA 404 ? 4 'BINDING SITE FOR RESIDUE NA A 404' AC5 Software A CL 405 ? 3 'BINDING SITE FOR RESIDUE CL A 405' AC6 Software A CL 406 ? 2 'BINDING SITE FOR RESIDUE CL A 406' AC7 Software A CL 407 ? 3 'BINDING SITE FOR RESIDUE CL A 407' AC8 Software A C6T 408 ? 24 'BINDING SITE FOR RESIDUE C6T A 408' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 190 ? ASP A 190 . ? 1_555 ? 2 AC1 5 ASP A 192 ? ASP A 192 . ? 1_555 ? 3 AC1 5 NA F . ? NA A 402 . ? 1_555 ? 4 AC1 5 C6T L . ? C6T A 408 . ? 1_555 ? 5 AC1 5 HOH M . ? HOH A 501 . ? 1_555 ? 6 AC2 6 ASP A 190 ? ASP A 190 . ? 1_555 ? 7 AC2 6 ASP A 192 ? ASP A 192 . ? 1_555 ? 8 AC2 6 ASP A 256 ? ASP A 256 . ? 1_555 ? 9 AC2 6 MG E . ? MG A 401 . ? 1_555 ? 10 AC2 6 C6T L . ? C6T A 408 . ? 1_555 ? 11 AC2 6 HOH O . ? HOH P 501 . ? 1_555 ? 12 AC3 6 THR A 101 ? THR A 101 . ? 1_555 ? 13 AC3 6 VAL A 103 ? VAL A 103 . ? 1_555 ? 14 AC3 6 ILE A 106 ? ILE A 106 . ? 1_555 ? 15 AC3 6 HOH M . ? HOH A 535 . ? 1_555 ? 16 AC3 6 DG C 9 ? DG P 9 . ? 1_555 ? 17 AC3 6 HOH O . ? HOH P 502 . ? 1_555 ? 18 AC4 4 LYS A 60 ? LYS A 60 . ? 1_555 ? 19 AC4 4 LEU A 62 ? LEU A 62 . ? 1_555 ? 20 AC4 4 VAL A 65 ? VAL A 65 . ? 1_555 ? 21 AC4 4 DC D 3 ? DC D 3 . ? 1_555 ? 22 AC5 3 ALA A 32 ? ALA A 32 . ? 1_555 ? 23 AC5 3 HIS A 34 ? HIS A 34 . ? 1_555 ? 24 AC5 3 LYS A 35 ? LYS A 35 . ? 1_555 ? 25 AC6 2 LEU A 82 ? LEU A 82 . ? 1_555 ? 26 AC6 2 ARG A 89 ? ARG A 89 . ? 1_555 ? 27 AC7 3 ASN A 294 ? ASN A 294 . ? 1_555 ? 28 AC7 3 THR A 297 ? THR A 297 . ? 1_555 ? 29 AC7 3 HOH M . ? HOH A 727 . ? 1_555 ? 30 AC8 24 GLY A 179 ? GLY A 179 . ? 1_555 ? 31 AC8 24 SER A 180 ? SER A 180 . ? 1_555 ? 32 AC8 24 ARG A 183 ? ARG A 183 . ? 1_555 ? 33 AC8 24 SER A 188 ? SER A 188 . ? 1_555 ? 34 AC8 24 GLY A 189 ? GLY A 189 . ? 1_555 ? 35 AC8 24 ASP A 190 ? ASP A 190 . ? 1_555 ? 36 AC8 24 ASP A 192 ? ASP A 192 . ? 1_555 ? 37 AC8 24 TYR A 271 ? TYR A 271 . ? 1_555 ? 38 AC8 24 PHE A 272 ? PHE A 272 . ? 1_555 ? 39 AC8 24 THR A 273 ? THR A 273 . ? 1_555 ? 40 AC8 24 GLY A 274 ? GLY A 274 . ? 1_555 ? 41 AC8 24 ASP A 276 ? ASP A 276 . ? 1_555 ? 42 AC8 24 ASN A 279 ? ASN A 279 . ? 1_555 ? 43 AC8 24 MG E . ? MG A 401 . ? 1_555 ? 44 AC8 24 NA F . ? NA A 402 . ? 1_555 ? 45 AC8 24 HOH M . ? HOH A 501 . ? 1_555 ? 46 AC8 24 HOH M . ? HOH A 505 . ? 1_555 ? 47 AC8 24 HOH M . ? HOH A 506 . ? 1_555 ? 48 AC8 24 HOH M . ? HOH A 600 . ? 1_555 ? 49 AC8 24 HOH M . ? HOH A 633 . ? 1_555 ? 50 AC8 24 HOH M . ? HOH A 653 . ? 1_555 ? 51 AC8 24 DOC C 10 ? DOC P 10 . ? 1_555 ? 52 AC8 24 HOH O . ? HOH P 501 . ? 1_555 ? 53 AC8 24 DA B 6 ? DA T 6 . ? 1_555 ? # _atom_sites.entry_id 4RT3 _atom_sites.fract_transf_matrix[1][1] 0.019710 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006221 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012514 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018950 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 PRO 7 7 ? ? ? A . n A 1 8 GLN 8 8 ? ? ? A . n A 1 9 GLU 9 9 ? ? ? A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 MET 236 236 236 MET MET A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 TYR 296 296 296 TYR TYR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 TRP 325 325 325 TRP TRP A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 PRO 330 330 330 PRO PRO A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 GLU 335 335 335 GLU GLU A . n B 2 1 DC 1 1 1 DC DC T . n B 2 2 DC 2 2 2 DC DC T . n B 2 3 DG 3 3 3 DG DG T . n B 2 4 DA 4 4 4 DA DA T . n B 2 5 DC 5 5 5 DC DC T . n B 2 6 DA 6 6 6 DA DA T . n B 2 7 DG 7 7 7 DG DG T . n B 2 8 DC 8 8 8 DC DC T . n B 2 9 DG 9 9 9 DG DG T . n B 2 10 DC 10 10 10 DC DC T . n B 2 11 DA 11 11 11 DA DA T . n B 2 12 DT 12 12 12 DT DT T . n B 2 13 DC 13 13 13 DC DC T . n B 2 14 DA 14 14 14 DA DA T . n B 2 15 DG 15 15 15 DG DG T . n B 2 16 DC 16 16 16 DC DC T . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DOC 10 10 10 DOC DOC P . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DT 2 2 2 DT DT D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n D 4 5 DG 5 5 5 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 401 401 MG MG A . F 6 NA 1 402 402 NA NA A . G 6 NA 1 403 403 NA NA A . H 6 NA 1 404 404 NA NA A . I 7 CL 1 405 405 CL CL A . J 7 CL 1 406 406 CL CL A . K 7 CL 1 407 407 CL CL A . L 8 C6T 1 408 408 C6T C6T A . M 9 HOH 1 501 502 HOH HOH A . M 9 HOH 2 502 503 HOH HOH A . M 9 HOH 3 503 504 HOH HOH A . M 9 HOH 4 504 505 HOH HOH A . M 9 HOH 5 505 506 HOH HOH A . M 9 HOH 6 506 507 HOH HOH A . M 9 HOH 7 507 508 HOH HOH A . M 9 HOH 8 508 509 HOH HOH A . M 9 HOH 9 509 510 HOH HOH A . M 9 HOH 10 510 511 HOH HOH A . M 9 HOH 11 511 512 HOH HOH A . M 9 HOH 12 512 513 HOH HOH A . M 9 HOH 13 513 514 HOH HOH A . M 9 HOH 14 514 515 HOH HOH A . M 9 HOH 15 515 516 HOH HOH A . M 9 HOH 16 516 517 HOH HOH A . M 9 HOH 17 517 518 HOH HOH A . M 9 HOH 18 518 519 HOH HOH A . M 9 HOH 19 519 520 HOH HOH A . M 9 HOH 20 520 521 HOH HOH A . M 9 HOH 21 521 522 HOH HOH A . M 9 HOH 22 522 523 HOH HOH A . M 9 HOH 23 523 524 HOH HOH A . M 9 HOH 24 524 525 HOH HOH A . M 9 HOH 25 525 526 HOH HOH A . M 9 HOH 26 526 527 HOH HOH A . M 9 HOH 27 527 528 HOH HOH A . M 9 HOH 28 528 529 HOH HOH A . M 9 HOH 29 529 530 HOH HOH A . M 9 HOH 30 530 531 HOH HOH A . M 9 HOH 31 531 532 HOH HOH A . M 9 HOH 32 532 533 HOH HOH A . M 9 HOH 33 533 534 HOH HOH A . M 9 HOH 34 534 535 HOH HOH A . M 9 HOH 35 535 536 HOH HOH A . M 9 HOH 36 536 537 HOH HOH A . M 9 HOH 37 537 538 HOH HOH A . M 9 HOH 38 538 539 HOH HOH A . M 9 HOH 39 539 540 HOH HOH A . M 9 HOH 40 540 541 HOH HOH A . M 9 HOH 41 541 542 HOH HOH A . M 9 HOH 42 542 543 HOH HOH A . M 9 HOH 43 543 544 HOH HOH A . M 9 HOH 44 544 545 HOH HOH A . M 9 HOH 45 545 546 HOH HOH A . M 9 HOH 46 546 547 HOH HOH A . M 9 HOH 47 547 548 HOH HOH A . M 9 HOH 48 548 549 HOH HOH A . M 9 HOH 49 549 550 HOH HOH A . M 9 HOH 50 550 551 HOH HOH A . M 9 HOH 51 551 552 HOH HOH A . M 9 HOH 52 552 553 HOH HOH A . M 9 HOH 53 553 554 HOH HOH A . M 9 HOH 54 554 555 HOH HOH A . M 9 HOH 55 555 556 HOH HOH A . M 9 HOH 56 556 557 HOH HOH A . M 9 HOH 57 557 558 HOH HOH A . M 9 HOH 58 558 559 HOH HOH A . M 9 HOH 59 559 560 HOH HOH A . M 9 HOH 60 560 561 HOH HOH A . M 9 HOH 61 561 562 HOH HOH A . M 9 HOH 62 562 563 HOH HOH A . M 9 HOH 63 563 564 HOH HOH A . M 9 HOH 64 564 565 HOH HOH A . M 9 HOH 65 565 566 HOH HOH A . M 9 HOH 66 566 567 HOH HOH A . M 9 HOH 67 567 568 HOH HOH A . M 9 HOH 68 568 569 HOH HOH A . M 9 HOH 69 569 570 HOH HOH A . M 9 HOH 70 570 571 HOH HOH A . M 9 HOH 71 571 572 HOH HOH A . M 9 HOH 72 572 573 HOH HOH A . M 9 HOH 73 573 574 HOH HOH A . M 9 HOH 74 574 575 HOH HOH A . M 9 HOH 75 575 576 HOH HOH A . M 9 HOH 76 576 577 HOH HOH A . M 9 HOH 77 577 578 HOH HOH A . M 9 HOH 78 578 579 HOH HOH A . M 9 HOH 79 579 580 HOH HOH A . M 9 HOH 80 580 581 HOH HOH A . M 9 HOH 81 581 582 HOH HOH A . M 9 HOH 82 582 583 HOH HOH A . M 9 HOH 83 583 584 HOH HOH A . M 9 HOH 84 584 585 HOH HOH A . M 9 HOH 85 585 586 HOH HOH A . M 9 HOH 86 586 587 HOH HOH A . M 9 HOH 87 587 588 HOH HOH A . M 9 HOH 88 588 589 HOH HOH A . M 9 HOH 89 589 590 HOH HOH A . M 9 HOH 90 590 591 HOH HOH A . M 9 HOH 91 591 592 HOH HOH A . M 9 HOH 92 592 593 HOH HOH A . M 9 HOH 93 593 594 HOH HOH A . M 9 HOH 94 594 595 HOH HOH A . M 9 HOH 95 595 596 HOH HOH A . M 9 HOH 96 596 597 HOH HOH A . M 9 HOH 97 597 598 HOH HOH A . M 9 HOH 98 598 599 HOH HOH A . M 9 HOH 99 599 600 HOH HOH A . M 9 HOH 100 600 601 HOH HOH A . M 9 HOH 101 601 602 HOH HOH A . M 9 HOH 102 602 603 HOH HOH A . M 9 HOH 103 603 604 HOH HOH A . M 9 HOH 104 604 605 HOH HOH A . M 9 HOH 105 605 606 HOH HOH A . M 9 HOH 106 606 607 HOH HOH A . M 9 HOH 107 607 608 HOH HOH A . M 9 HOH 108 608 609 HOH HOH A . M 9 HOH 109 609 610 HOH HOH A . M 9 HOH 110 610 611 HOH HOH A . M 9 HOH 111 611 612 HOH HOH A . M 9 HOH 112 612 613 HOH HOH A . M 9 HOH 113 613 614 HOH HOH A . M 9 HOH 114 614 615 HOH HOH A . M 9 HOH 115 615 616 HOH HOH A . M 9 HOH 116 616 617 HOH HOH A . M 9 HOH 117 617 618 HOH HOH A . M 9 HOH 118 618 619 HOH HOH A . M 9 HOH 119 619 620 HOH HOH A . M 9 HOH 120 620 621 HOH HOH A . M 9 HOH 121 621 622 HOH HOH A . M 9 HOH 122 622 623 HOH HOH A . M 9 HOH 123 623 624 HOH HOH A . M 9 HOH 124 624 625 HOH HOH A . M 9 HOH 125 625 626 HOH HOH A . M 9 HOH 126 626 627 HOH HOH A . M 9 HOH 127 627 628 HOH HOH A . M 9 HOH 128 628 629 HOH HOH A . M 9 HOH 129 629 630 HOH HOH A . M 9 HOH 130 630 631 HOH HOH A . M 9 HOH 131 631 632 HOH HOH A . M 9 HOH 132 632 633 HOH HOH A . M 9 HOH 133 633 634 HOH HOH A . M 9 HOH 134 634 635 HOH HOH A . M 9 HOH 135 635 636 HOH HOH A . M 9 HOH 136 636 637 HOH HOH A . M 9 HOH 137 637 638 HOH HOH A . M 9 HOH 138 638 639 HOH HOH A . M 9 HOH 139 639 640 HOH HOH A . M 9 HOH 140 640 641 HOH HOH A . M 9 HOH 141 641 642 HOH HOH A . M 9 HOH 142 642 643 HOH HOH A . M 9 HOH 143 643 644 HOH HOH A . M 9 HOH 144 644 645 HOH HOH A . M 9 HOH 145 645 646 HOH HOH A . M 9 HOH 146 646 647 HOH HOH A . M 9 HOH 147 647 648 HOH HOH A . M 9 HOH 148 648 649 HOH HOH A . M 9 HOH 149 649 650 HOH HOH A . M 9 HOH 150 650 651 HOH HOH A . M 9 HOH 151 651 652 HOH HOH A . M 9 HOH 152 652 653 HOH HOH A . M 9 HOH 153 653 654 HOH HOH A . M 9 HOH 154 654 655 HOH HOH A . M 9 HOH 155 655 656 HOH HOH A . M 9 HOH 156 656 657 HOH HOH A . M 9 HOH 157 657 658 HOH HOH A . M 9 HOH 158 658 659 HOH HOH A . M 9 HOH 159 659 660 HOH HOH A . M 9 HOH 160 660 661 HOH HOH A . M 9 HOH 161 661 662 HOH HOH A . M 9 HOH 162 662 663 HOH HOH A . M 9 HOH 163 663 664 HOH HOH A . M 9 HOH 164 664 665 HOH HOH A . M 9 HOH 165 665 666 HOH HOH A . M 9 HOH 166 666 667 HOH HOH A . M 9 HOH 167 667 668 HOH HOH A . M 9 HOH 168 668 669 HOH HOH A . M 9 HOH 169 669 670 HOH HOH A . M 9 HOH 170 670 671 HOH HOH A . M 9 HOH 171 671 672 HOH HOH A . M 9 HOH 172 672 673 HOH HOH A . M 9 HOH 173 673 674 HOH HOH A . M 9 HOH 174 674 675 HOH HOH A . M 9 HOH 175 675 676 HOH HOH A . M 9 HOH 176 676 677 HOH HOH A . M 9 HOH 177 677 678 HOH HOH A . M 9 HOH 178 678 679 HOH HOH A . M 9 HOH 179 679 680 HOH HOH A . M 9 HOH 180 680 681 HOH HOH A . M 9 HOH 181 681 682 HOH HOH A . M 9 HOH 182 682 683 HOH HOH A . M 9 HOH 183 683 684 HOH HOH A . M 9 HOH 184 684 685 HOH HOH A . M 9 HOH 185 685 686 HOH HOH A . M 9 HOH 186 686 687 HOH HOH A . M 9 HOH 187 687 688 HOH HOH A . M 9 HOH 188 688 689 HOH HOH A . M 9 HOH 189 689 690 HOH HOH A . M 9 HOH 190 690 691 HOH HOH A . M 9 HOH 191 691 692 HOH HOH A . M 9 HOH 192 692 693 HOH HOH A . M 9 HOH 193 693 694 HOH HOH A . M 9 HOH 194 694 695 HOH HOH A . M 9 HOH 195 695 696 HOH HOH A . M 9 HOH 196 696 697 HOH HOH A . M 9 HOH 197 697 698 HOH HOH A . M 9 HOH 198 698 699 HOH HOH A . M 9 HOH 199 699 700 HOH HOH A . M 9 HOH 200 700 701 HOH HOH A . M 9 HOH 201 701 702 HOH HOH A . M 9 HOH 202 702 703 HOH HOH A . M 9 HOH 203 703 704 HOH HOH A . M 9 HOH 204 704 705 HOH HOH A . M 9 HOH 205 705 706 HOH HOH A . M 9 HOH 206 706 707 HOH HOH A . M 9 HOH 207 707 708 HOH HOH A . M 9 HOH 208 708 709 HOH HOH A . M 9 HOH 209 709 710 HOH HOH A . M 9 HOH 210 710 711 HOH HOH A . M 9 HOH 211 711 712 HOH HOH A . M 9 HOH 212 712 713 HOH HOH A . M 9 HOH 213 713 714 HOH HOH A . M 9 HOH 214 714 715 HOH HOH A . M 9 HOH 215 715 716 HOH HOH A . M 9 HOH 216 716 717 HOH HOH A . M 9 HOH 217 717 718 HOH HOH A . M 9 HOH 218 718 719 HOH HOH A . M 9 HOH 219 719 720 HOH HOH A . M 9 HOH 220 720 721 HOH HOH A . M 9 HOH 221 721 722 HOH HOH A . M 9 HOH 222 722 723 HOH HOH A . M 9 HOH 223 723 724 HOH HOH A . M 9 HOH 224 724 725 HOH HOH A . M 9 HOH 225 725 726 HOH HOH A . M 9 HOH 226 726 727 HOH HOH A . M 9 HOH 227 727 728 HOH HOH A . M 9 HOH 228 728 729 HOH HOH A . M 9 HOH 229 729 730 HOH HOH A . M 9 HOH 230 730 731 HOH HOH A . M 9 HOH 231 731 732 HOH HOH A . M 9 HOH 232 732 733 HOH HOH A . M 9 HOH 233 733 734 HOH HOH A . M 9 HOH 234 734 735 HOH HOH A . M 9 HOH 235 735 736 HOH HOH A . M 9 HOH 236 736 737 HOH HOH A . M 9 HOH 237 737 738 HOH HOH A . M 9 HOH 238 738 739 HOH HOH A . M 9 HOH 239 739 740 HOH HOH A . M 9 HOH 240 740 741 HOH HOH A . M 9 HOH 241 741 742 HOH HOH A . M 9 HOH 242 742 743 HOH HOH A . M 9 HOH 243 743 744 HOH HOH A . M 9 HOH 244 744 745 HOH HOH A . M 9 HOH 245 745 746 HOH HOH A . M 9 HOH 246 746 747 HOH HOH A . M 9 HOH 247 747 748 HOH HOH A . M 9 HOH 248 748 749 HOH HOH A . M 9 HOH 249 749 750 HOH HOH A . M 9 HOH 250 750 751 HOH HOH A . M 9 HOH 251 751 752 HOH HOH A . M 9 HOH 252 752 753 HOH HOH A . M 9 HOH 253 753 754 HOH HOH A . M 9 HOH 254 754 755 HOH HOH A . M 9 HOH 255 755 756 HOH HOH A . M 9 HOH 256 756 757 HOH HOH A . M 9 HOH 257 757 758 HOH HOH A . M 9 HOH 258 758 759 HOH HOH A . M 9 HOH 259 759 760 HOH HOH A . M 9 HOH 260 760 761 HOH HOH A . M 9 HOH 261 761 762 HOH HOH A . N 9 HOH 1 101 101 HOH HOH T . N 9 HOH 2 102 102 HOH HOH T . N 9 HOH 3 103 103 HOH HOH T . N 9 HOH 4 104 104 HOH HOH T . N 9 HOH 5 105 105 HOH HOH T . N 9 HOH 6 106 106 HOH HOH T . N 9 HOH 7 107 107 HOH HOH T . N 9 HOH 8 108 108 HOH HOH T . N 9 HOH 9 109 109 HOH HOH T . N 9 HOH 10 110 110 HOH HOH T . N 9 HOH 11 111 111 HOH HOH T . N 9 HOH 12 112 112 HOH HOH T . N 9 HOH 13 113 113 HOH HOH T . N 9 HOH 14 114 114 HOH HOH T . N 9 HOH 15 115 115 HOH HOH T . N 9 HOH 16 116 116 HOH HOH T . N 9 HOH 17 117 117 HOH HOH T . N 9 HOH 18 118 118 HOH HOH T . N 9 HOH 19 119 119 HOH HOH T . N 9 HOH 20 120 120 HOH HOH T . N 9 HOH 21 121 121 HOH HOH T . N 9 HOH 22 122 122 HOH HOH T . N 9 HOH 23 123 123 HOH HOH T . N 9 HOH 24 124 124 HOH HOH T . N 9 HOH 25 125 125 HOH HOH T . N 9 HOH 26 126 126 HOH HOH T . N 9 HOH 27 127 127 HOH HOH T . N 9 HOH 28 128 128 HOH HOH T . N 9 HOH 29 129 129 HOH HOH T . N 9 HOH 30 130 130 HOH HOH T . N 9 HOH 31 131 131 HOH HOH T . N 9 HOH 32 132 132 HOH HOH T . N 9 HOH 33 133 133 HOH HOH T . N 9 HOH 34 134 134 HOH HOH T . N 9 HOH 35 135 135 HOH HOH T . N 9 HOH 36 136 136 HOH HOH T . N 9 HOH 37 137 137 HOH HOH T . N 9 HOH 38 138 138 HOH HOH T . N 9 HOH 39 139 139 HOH HOH T . N 9 HOH 40 140 140 HOH HOH T . N 9 HOH 41 141 141 HOH HOH T . O 9 HOH 1 501 118 HOH HOH P . O 9 HOH 2 502 101 HOH HOH P . O 9 HOH 3 503 102 HOH HOH P . O 9 HOH 4 504 103 HOH HOH P . O 9 HOH 5 505 104 HOH HOH P . O 9 HOH 6 506 105 HOH HOH P . O 9 HOH 7 507 106 HOH HOH P . O 9 HOH 8 508 107 HOH HOH P . O 9 HOH 9 509 108 HOH HOH P . O 9 HOH 10 510 109 HOH HOH P . O 9 HOH 11 511 110 HOH HOH P . O 9 HOH 12 512 111 HOH HOH P . O 9 HOH 13 513 112 HOH HOH P . O 9 HOH 14 514 113 HOH HOH P . O 9 HOH 15 515 114 HOH HOH P . O 9 HOH 16 516 115 HOH HOH P . O 9 HOH 17 517 116 HOH HOH P . O 9 HOH 18 518 117 HOH HOH P . P 9 HOH 1 101 101 HOH HOH D . P 9 HOH 2 102 102 HOH HOH D . P 9 HOH 3 103 103 HOH HOH D . P 9 HOH 4 104 104 HOH HOH D . P 9 HOH 5 105 105 HOH HOH D . P 9 HOH 6 106 106 HOH HOH D . P 9 HOH 7 107 107 HOH HOH D . P 9 HOH 8 108 501 HOH HOH D . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id DOC _pdbx_struct_mod_residue.label_seq_id 10 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id DOC _pdbx_struct_mod_residue.auth_seq_id 10 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5800 ? 1 MORE -98 ? 1 'SSA (A^2)' 19940 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A LEU 62 ? A LEU 62 ? 1_555 90.8 ? 2 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 89.2 ? 3 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 93.9 ? 4 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 170.4 ? 5 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 96.0 ? 6 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? D DC 3 ? D DC 3 ? 1_555 83.6 ? 7 O ? A THR 101 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 95.5 ? 8 O ? A THR 101 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 91.1 ? 9 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 86.0 ? 10 O ? A THR 101 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 535 ? 1_555 84.0 ? 11 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 535 ? 1_555 87.5 ? 12 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 535 ? 1_555 171.5 ? 13 O ? A THR 101 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 165.1 ? 14 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 96.4 ? 15 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 98.6 ? 16 O ? M HOH . ? A HOH 535 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 87.6 ? 17 O ? A THR 101 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? O HOH . ? P HOH 502 ? 1_555 81.9 ? 18 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? O HOH . ? P HOH 502 ? 1_555 176.1 ? 19 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? O HOH . ? P HOH 502 ? 1_555 91.0 ? 20 O ? M HOH . ? A HOH 535 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? O HOH . ? P HOH 502 ? 1_555 95.2 ? 21 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? O HOH . ? P HOH 502 ? 1_555 86.6 ? 22 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 96.1 ? 23 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O2B ? L C6T . ? A C6T 408 ? 1_555 172.5 ? 24 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O2B ? L C6T . ? A C6T 408 ? 1_555 90.2 ? 25 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O3G ? L C6T . ? A C6T 408 ? 1_555 86.3 ? 26 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O3G ? L C6T . ? A C6T 408 ? 1_555 173.4 ? 27 O2B ? L C6T . ? A C6T 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O3G ? L C6T . ? A C6T 408 ? 1_555 87.9 ? 28 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 94.3 ? 29 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 85.0 ? 30 O2B ? L C6T . ? A C6T 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 90.4 ? 31 O3G ? L C6T . ? A C6T 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 88.7 ? 32 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? M HOH . ? A HOH 501 ? 1_555 86.9 ? 33 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? M HOH . ? A HOH 501 ? 1_555 91.0 ? 34 O2B ? L C6T . ? A C6T 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? M HOH . ? A HOH 501 ? 1_555 88.9 ? 35 O3G ? L C6T . ? A C6T 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? M HOH . ? A HOH 501 ? 1_555 95.3 ? 36 O1A ? L C6T . ? A C6T 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? M HOH . ? A HOH 501 ? 1_555 175.9 ? 37 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 45.6 ? 38 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 107.4 ? 39 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 80.2 ? 40 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 99.1 ? 41 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 138.5 ? 42 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 95.5 ? 43 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 102.4 ? 44 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 66.2 ? 45 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 89.5 ? 46 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O1A ? L C6T . ? A C6T 408 ? 1_555 155.3 ? 47 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? O HOH . ? P HOH 501 ? 1_555 91.2 ? 48 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? O HOH . ? P HOH 501 ? 1_555 112.3 ? 49 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? O HOH . ? P HOH 501 ? 1_555 161.2 ? 50 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? O HOH . ? P HOH 501 ? 1_555 84.3 ? 51 O1A ? L C6T . ? A C6T 408 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? O HOH . ? P HOH 501 ? 1_555 83.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-07-01 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 2 'Structure model' '_pdbx_struct_conn_angle.value' 23 2 'Structure model' '_struct_conn.pdbx_dist_value' 24 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 25 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 40 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 41 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.920 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 28973 _diffrn_reflns.pdbx_Rmerge_I_obs 0.079 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.31 _diffrn_reflns.pdbx_redundancy 3.30 _diffrn_reflns.pdbx_rejects ? _diffrn_reflns.pdbx_percent_possible_obs 89.80 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.number 96986 _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 1.92 1.99 ? ? 0.479 ? 1.560 2.00 ? 1 1.99 2.07 ? ? 0.334 ? 1.523 2.30 ? 1 2.07 2.16 ? ? 0.256 ? 1.327 2.80 ? 1 2.16 2.28 ? ? 0.223 ? 1.312 3.40 ? 1 2.28 2.42 ? ? 0.186 ? 1.250 3.60 ? 1 2.42 2.61 ? ? 0.155 ? 1.415 3.60 ? 1 2.61 2.87 ? ? 0.123 ? 1.475 3.60 ? 1 2.87 3.28 ? ? 0.087 ? 1.329 3.60 ? 1 3.28 4.14 ? ? 0.064 ? 1.158 3.70 ? 1 4.14 50.00 ? ? 0.056 ? 1.090 3.70 ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX . ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.15 'July. 29, 2014' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 PHENIX . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 186 ? ? O A HOH 650 ? ? 1.85 2 1 O A HOH 637 ? ? O A HOH 726 ? ? 1.86 3 1 O A HOH 722 ? ? O A HOH 732 ? ? 1.86 4 1 OP2 P DC 2 ? ? O P HOH 506 ? ? 1.87 5 1 O A HOH 729 ? ? O A HOH 730 ? ? 1.89 6 1 O T HOH 124 ? ? O T HOH 127 ? ? 2.00 7 1 O T HOH 133 ? ? O T HOH 138 ? ? 2.00 8 1 O A HOH 648 ? ? O A HOH 742 ? ? 2.00 9 1 O A HOH 550 ? ? O A HOH 742 ? ? 2.03 10 1 O A HOH 532 ? ? O A HOH 741 ? ? 2.04 11 1 O P HOH 510 ? ? O P HOH 514 ? ? 2.07 12 1 O T HOH 110 ? ? O T HOH 129 ? ? 2.11 13 1 O T HOH 137 ? ? O P HOH 513 ? ? 2.13 14 1 O A HOH 630 ? ? O T HOH 109 ? ? 2.14 15 1 O T HOH 118 ? ? O T HOH 139 ? ? 2.15 16 1 O T HOH 135 ? ? O T HOH 137 ? ? 2.15 17 1 O A HOH 758 ? ? O A HOH 759 ? ? 2.17 18 1 OP2 P DG 7 ? ? O P HOH 510 ? ? 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 THR _pdbx_validate_symm_contact.auth_seq_id_1 79 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 583 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_646 _pdbx_validate_symm_contact.dist 2.16 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.488 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.119 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" T DC 5 ? ? "C1'" T DC 5 ? ? N1 T DC 5 ? ? 110.53 108.30 2.23 0.30 N 2 1 "O4'" T DC 8 ? ? "C1'" T DC 8 ? ? N1 T DC 8 ? ? 110.23 108.30 1.93 0.30 N 3 1 "O4'" P DG 9 ? ? "C4'" P DG 9 ? ? "C3'" P DG 9 ? ? 102.06 104.50 -2.44 0.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 178 ? ? -116.52 -137.07 2 1 ASN A 294 ? ? -126.16 -169.31 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 248 ? CG ? A LYS 248 CG 2 1 Y 1 A LYS 248 ? CD ? A LYS 248 CD 3 1 Y 1 A LYS 248 ? CE ? A LYS 248 CE 4 1 Y 1 A LYS 248 ? NZ ? A LYS 248 NZ 5 1 Y 1 A VAL 303 ? CG1 ? A VAL 303 CG1 6 1 Y 1 A VAL 303 ? CG2 ? A VAL 303 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A PRO 7 ? A PRO 7 8 1 Y 1 A GLN 8 ? A GLN 8 9 1 Y 1 A GLU 9 ? A GLU 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C6T O4 O N N 74 C6T C4 C N N 75 C6T C5 C N N 76 C6T C7 C N N 77 C6T C6 C N N 78 C6T N3 N N N 79 C6T C2 C N N 80 C6T O2 O N N 81 C6T N1 N N N 82 C6T "C1'" C N R 83 C6T "C2'" C N N 84 C6T "C3'" C N S 85 C6T "O3'" O N N 86 C6T "O4'" O N N 87 C6T "C4'" C N R 88 C6T "C5'" C N N 89 C6T "O5'" O N N 90 C6T PA P N N 91 C6T O1A O N N 92 C6T O2A O N N 93 C6T N3A N N N 94 C6T PB P N N 95 C6T O1B O N N 96 C6T O2B O N N 97 C6T C3B C N N 98 C6T PG P N N 99 C6T O2G O N N 100 C6T O1G O N N 101 C6T O3G O N N 102 C6T H1 H N N 103 C6T H2 H N N 104 C6T H3 H N N 105 C6T H4 H N N 106 C6T H5 H N N 107 C6T H6 H N N 108 C6T H7 H N N 109 C6T H8 H N N 110 C6T H9 H N N 111 C6T H10 H N N 112 C6T H11 H N N 113 C6T H12 H N N 114 C6T H13 H N N 115 C6T H14 H N N 116 C6T H15 H N N 117 C6T H16 H N N 118 C6T H17 H N N 119 C6T H18 H N N 120 C6T H19 H N N 121 C6T H20 H N N 122 CL CL CL N N 123 CYS N N N N 124 CYS CA C N R 125 CYS C C N N 126 CYS O O N N 127 CYS CB C N N 128 CYS SG S N N 129 CYS OXT O N N 130 CYS H H N N 131 CYS H2 H N N 132 CYS HA H N N 133 CYS HB2 H N N 134 CYS HB3 H N N 135 CYS HG H N N 136 CYS HXT H N N 137 DA OP3 O N N 138 DA P P N N 139 DA OP1 O N N 140 DA OP2 O N N 141 DA "O5'" O N N 142 DA "C5'" C N N 143 DA "C4'" C N R 144 DA "O4'" O N N 145 DA "C3'" C N S 146 DA "O3'" O N N 147 DA "C2'" C N N 148 DA "C1'" C N R 149 DA N9 N Y N 150 DA C8 C Y N 151 DA N7 N Y N 152 DA C5 C Y N 153 DA C6 C Y N 154 DA N6 N N N 155 DA N1 N Y N 156 DA C2 C Y N 157 DA N3 N Y N 158 DA C4 C Y N 159 DA HOP3 H N N 160 DA HOP2 H N N 161 DA "H5'" H N N 162 DA "H5''" H N N 163 DA "H4'" H N N 164 DA "H3'" H N N 165 DA "HO3'" H N N 166 DA "H2'" H N N 167 DA "H2''" H N N 168 DA "H1'" H N N 169 DA H8 H N N 170 DA H61 H N N 171 DA H62 H N N 172 DA H2 H N N 173 DC OP3 O N N 174 DC P P N N 175 DC OP1 O N N 176 DC OP2 O N N 177 DC "O5'" O N N 178 DC "C5'" C N N 179 DC "C4'" C N R 180 DC "O4'" O N N 181 DC "C3'" C N S 182 DC "O3'" O N N 183 DC "C2'" C N N 184 DC "C1'" C N R 185 DC N1 N N N 186 DC C2 C N N 187 DC O2 O N N 188 DC N3 N N N 189 DC C4 C N N 190 DC N4 N N N 191 DC C5 C N N 192 DC C6 C N N 193 DC HOP3 H N N 194 DC HOP2 H N N 195 DC "H5'" H N N 196 DC "H5''" H N N 197 DC "H4'" H N N 198 DC "H3'" H N N 199 DC "HO3'" H N N 200 DC "H2'" H N N 201 DC "H2''" H N N 202 DC "H1'" H N N 203 DC H41 H N N 204 DC H42 H N N 205 DC H5 H N N 206 DC H6 H N N 207 DG OP3 O N N 208 DG P P N N 209 DG OP1 O N N 210 DG OP2 O N N 211 DG "O5'" O N N 212 DG "C5'" C N N 213 DG "C4'" C N R 214 DG "O4'" O N N 215 DG "C3'" C N S 216 DG "O3'" O N N 217 DG "C2'" C N N 218 DG "C1'" C N R 219 DG N9 N Y N 220 DG C8 C Y N 221 DG N7 N Y N 222 DG C5 C Y N 223 DG C6 C N N 224 DG O6 O N N 225 DG N1 N N N 226 DG C2 C N N 227 DG N2 N N N 228 DG N3 N N N 229 DG C4 C Y N 230 DG HOP3 H N N 231 DG HOP2 H N N 232 DG "H5'" H N N 233 DG "H5''" H N N 234 DG "H4'" H N N 235 DG "H3'" H N N 236 DG "HO3'" H N N 237 DG "H2'" H N N 238 DG "H2''" H N N 239 DG "H1'" H N N 240 DG H8 H N N 241 DG H1 H N N 242 DG H21 H N N 243 DG H22 H N N 244 DOC N1 N N N 245 DOC C2 C N N 246 DOC N3 N N N 247 DOC C4 C N N 248 DOC C5 C N N 249 DOC C6 C N N 250 DOC O2 O N N 251 DOC N4 N N N 252 DOC "C1'" C N R 253 DOC "C2'" C N N 254 DOC "C3'" C N N 255 DOC "C4'" C N S 256 DOC "O4'" O N N 257 DOC "C5'" C N N 258 DOC "O5'" O N N 259 DOC P P N N 260 DOC OP1 O N N 261 DOC OP2 O N N 262 DOC OP3 O N N 263 DOC H5 H N N 264 DOC H6 H N N 265 DOC HN41 H N N 266 DOC HN42 H N N 267 DOC "H1'" H N N 268 DOC "H2'" H N N 269 DOC "H2''" H N N 270 DOC "H3'1" H N N 271 DOC "H3'2" H N N 272 DOC "H4'" H N N 273 DOC "H5'" H N N 274 DOC "H5''" H N N 275 DOC HOP2 H N N 276 DOC HOP3 H N N 277 DT OP3 O N N 278 DT P P N N 279 DT OP1 O N N 280 DT OP2 O N N 281 DT "O5'" O N N 282 DT "C5'" C N N 283 DT "C4'" C N R 284 DT "O4'" O N N 285 DT "C3'" C N S 286 DT "O3'" O N N 287 DT "C2'" C N N 288 DT "C1'" C N R 289 DT N1 N N N 290 DT C2 C N N 291 DT O2 O N N 292 DT N3 N N N 293 DT C4 C N N 294 DT O4 O N N 295 DT C5 C N N 296 DT C7 C N N 297 DT C6 C N N 298 DT HOP3 H N N 299 DT HOP2 H N N 300 DT "H5'" H N N 301 DT "H5''" H N N 302 DT "H4'" H N N 303 DT "H3'" H N N 304 DT "HO3'" H N N 305 DT "H2'" H N N 306 DT "H2''" H N N 307 DT "H1'" H N N 308 DT H3 H N N 309 DT H71 H N N 310 DT H72 H N N 311 DT H73 H N N 312 DT H6 H N N 313 GLN N N N N 314 GLN CA C N S 315 GLN C C N N 316 GLN O O N N 317 GLN CB C N N 318 GLN CG C N N 319 GLN CD C N N 320 GLN OE1 O N N 321 GLN NE2 N N N 322 GLN OXT O N N 323 GLN H H N N 324 GLN H2 H N N 325 GLN HA H N N 326 GLN HB2 H N N 327 GLN HB3 H N N 328 GLN HG2 H N N 329 GLN HG3 H N N 330 GLN HE21 H N N 331 GLN HE22 H N N 332 GLN HXT H N N 333 GLU N N N N 334 GLU CA C N S 335 GLU C C N N 336 GLU O O N N 337 GLU CB C N N 338 GLU CG C N N 339 GLU CD C N N 340 GLU OE1 O N N 341 GLU OE2 O N N 342 GLU OXT O N N 343 GLU H H N N 344 GLU H2 H N N 345 GLU HA H N N 346 GLU HB2 H N N 347 GLU HB3 H N N 348 GLU HG2 H N N 349 GLU HG3 H N N 350 GLU HE2 H N N 351 GLU HXT H N N 352 GLY N N N N 353 GLY CA C N N 354 GLY C C N N 355 GLY O O N N 356 GLY OXT O N N 357 GLY H H N N 358 GLY H2 H N N 359 GLY HA2 H N N 360 GLY HA3 H N N 361 GLY HXT H N N 362 HIS N N N N 363 HIS CA C N S 364 HIS C C N N 365 HIS O O N N 366 HIS CB C N N 367 HIS CG C Y N 368 HIS ND1 N Y N 369 HIS CD2 C Y N 370 HIS CE1 C Y N 371 HIS NE2 N Y N 372 HIS OXT O N N 373 HIS H H N N 374 HIS H2 H N N 375 HIS HA H N N 376 HIS HB2 H N N 377 HIS HB3 H N N 378 HIS HD1 H N N 379 HIS HD2 H N N 380 HIS HE1 H N N 381 HIS HE2 H N N 382 HIS HXT H N N 383 HOH O O N N 384 HOH H1 H N N 385 HOH H2 H N N 386 ILE N N N N 387 ILE CA C N S 388 ILE C C N N 389 ILE O O N N 390 ILE CB C N S 391 ILE CG1 C N N 392 ILE CG2 C N N 393 ILE CD1 C N N 394 ILE OXT O N N 395 ILE H H N N 396 ILE H2 H N N 397 ILE HA H N N 398 ILE HB H N N 399 ILE HG12 H N N 400 ILE HG13 H N N 401 ILE HG21 H N N 402 ILE HG22 H N N 403 ILE HG23 H N N 404 ILE HD11 H N N 405 ILE HD12 H N N 406 ILE HD13 H N N 407 ILE HXT H N N 408 LEU N N N N 409 LEU CA C N S 410 LEU C C N N 411 LEU O O N N 412 LEU CB C N N 413 LEU CG C N N 414 LEU CD1 C N N 415 LEU CD2 C N N 416 LEU OXT O N N 417 LEU H H N N 418 LEU H2 H N N 419 LEU HA H N N 420 LEU HB2 H N N 421 LEU HB3 H N N 422 LEU HG H N N 423 LEU HD11 H N N 424 LEU HD12 H N N 425 LEU HD13 H N N 426 LEU HD21 H N N 427 LEU HD22 H N N 428 LEU HD23 H N N 429 LEU HXT H N N 430 LYS N N N N 431 LYS CA C N S 432 LYS C C N N 433 LYS O O N N 434 LYS CB C N N 435 LYS CG C N N 436 LYS CD C N N 437 LYS CE C N N 438 LYS NZ N N N 439 LYS OXT O N N 440 LYS H H N N 441 LYS H2 H N N 442 LYS HA H N N 443 LYS HB2 H N N 444 LYS HB3 H N N 445 LYS HG2 H N N 446 LYS HG3 H N N 447 LYS HD2 H N N 448 LYS HD3 H N N 449 LYS HE2 H N N 450 LYS HE3 H N N 451 LYS HZ1 H N N 452 LYS HZ2 H N N 453 LYS HZ3 H N N 454 LYS HXT H N N 455 MET N N N N 456 MET CA C N S 457 MET C C N N 458 MET O O N N 459 MET CB C N N 460 MET CG C N N 461 MET SD S N N 462 MET CE C N N 463 MET OXT O N N 464 MET H H N N 465 MET H2 H N N 466 MET HA H N N 467 MET HB2 H N N 468 MET HB3 H N N 469 MET HG2 H N N 470 MET HG3 H N N 471 MET HE1 H N N 472 MET HE2 H N N 473 MET HE3 H N N 474 MET HXT H N N 475 MG MG MG N N 476 NA NA NA N N 477 PHE N N N N 478 PHE CA C N S 479 PHE C C N N 480 PHE O O N N 481 PHE CB C N N 482 PHE CG C Y N 483 PHE CD1 C Y N 484 PHE CD2 C Y N 485 PHE CE1 C Y N 486 PHE CE2 C Y N 487 PHE CZ C Y N 488 PHE OXT O N N 489 PHE H H N N 490 PHE H2 H N N 491 PHE HA H N N 492 PHE HB2 H N N 493 PHE HB3 H N N 494 PHE HD1 H N N 495 PHE HD2 H N N 496 PHE HE1 H N N 497 PHE HE2 H N N 498 PHE HZ H N N 499 PHE HXT H N N 500 PRO N N N N 501 PRO CA C N S 502 PRO C C N N 503 PRO O O N N 504 PRO CB C N N 505 PRO CG C N N 506 PRO CD C N N 507 PRO OXT O N N 508 PRO H H N N 509 PRO HA H N N 510 PRO HB2 H N N 511 PRO HB3 H N N 512 PRO HG2 H N N 513 PRO HG3 H N N 514 PRO HD2 H N N 515 PRO HD3 H N N 516 PRO HXT H N N 517 SER N N N N 518 SER CA C N S 519 SER C C N N 520 SER O O N N 521 SER CB C N N 522 SER OG O N N 523 SER OXT O N N 524 SER H H N N 525 SER H2 H N N 526 SER HA H N N 527 SER HB2 H N N 528 SER HB3 H N N 529 SER HG H N N 530 SER HXT H N N 531 THR N N N N 532 THR CA C N S 533 THR C C N N 534 THR O O N N 535 THR CB C N R 536 THR OG1 O N N 537 THR CG2 C N N 538 THR OXT O N N 539 THR H H N N 540 THR H2 H N N 541 THR HA H N N 542 THR HB H N N 543 THR HG1 H N N 544 THR HG21 H N N 545 THR HG22 H N N 546 THR HG23 H N N 547 THR HXT H N N 548 TRP N N N N 549 TRP CA C N S 550 TRP C C N N 551 TRP O O N N 552 TRP CB C N N 553 TRP CG C Y N 554 TRP CD1 C Y N 555 TRP CD2 C Y N 556 TRP NE1 N Y N 557 TRP CE2 C Y N 558 TRP CE3 C Y N 559 TRP CZ2 C Y N 560 TRP CZ3 C Y N 561 TRP CH2 C Y N 562 TRP OXT O N N 563 TRP H H N N 564 TRP H2 H N N 565 TRP HA H N N 566 TRP HB2 H N N 567 TRP HB3 H N N 568 TRP HD1 H N N 569 TRP HE1 H N N 570 TRP HE3 H N N 571 TRP HZ2 H N N 572 TRP HZ3 H N N 573 TRP HH2 H N N 574 TRP HXT H N N 575 TYR N N N N 576 TYR CA C N S 577 TYR C C N N 578 TYR O O N N 579 TYR CB C N N 580 TYR CG C Y N 581 TYR CD1 C Y N 582 TYR CD2 C Y N 583 TYR CE1 C Y N 584 TYR CE2 C Y N 585 TYR CZ C Y N 586 TYR OH O N N 587 TYR OXT O N N 588 TYR H H N N 589 TYR H2 H N N 590 TYR HA H N N 591 TYR HB2 H N N 592 TYR HB3 H N N 593 TYR HD1 H N N 594 TYR HD2 H N N 595 TYR HE1 H N N 596 TYR HE2 H N N 597 TYR HH H N N 598 TYR HXT H N N 599 VAL N N N N 600 VAL CA C N S 601 VAL C C N N 602 VAL O O N N 603 VAL CB C N N 604 VAL CG1 C N N 605 VAL CG2 C N N 606 VAL OXT O N N 607 VAL H H N N 608 VAL H2 H N N 609 VAL HA H N N 610 VAL HB H N N 611 VAL HG11 H N N 612 VAL HG12 H N N 613 VAL HG13 H N N 614 VAL HG21 H N N 615 VAL HG22 H N N 616 VAL HG23 H N N 617 VAL HXT H N N 618 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C6T O2 C2 doub N N 70 C6T C2 N3 sing N N 71 C6T C2 N1 sing N N 72 C6T N3 C4 sing N N 73 C6T "C2'" "C1'" sing N N 74 C6T "C2'" "C3'" sing N N 75 C6T "C1'" N1 sing N N 76 C6T "C1'" "O4'" sing N N 77 C6T N1 C6 sing N N 78 C6T "O3'" "C3'" sing N N 79 C6T C4 O4 doub N N 80 C6T C4 C5 sing N N 81 C6T "C3'" "C4'" sing N N 82 C6T "O4'" "C4'" sing N N 83 C6T C6 C5 doub N N 84 C6T "C4'" "C5'" sing N N 85 C6T C5 C7 sing N N 86 C6T O1B PB doub N N 87 C6T "C5'" "O5'" sing N N 88 C6T "O5'" PA sing N N 89 C6T PB N3A sing N N 90 C6T PB O2B sing N N 91 C6T PB C3B sing N N 92 C6T N3A PA sing N N 93 C6T C3B PG sing N N 94 C6T PA O2A doub N N 95 C6T PA O1A sing N N 96 C6T PG O2G doub N N 97 C6T PG O3G sing N N 98 C6T PG O1G sing N N 99 C6T C7 H1 sing N N 100 C6T C7 H2 sing N N 101 C6T C7 H3 sing N N 102 C6T C6 H4 sing N N 103 C6T N3 H5 sing N N 104 C6T "C1'" H6 sing N N 105 C6T "C2'" H7 sing N N 106 C6T "C2'" H8 sing N N 107 C6T "C3'" H9 sing N N 108 C6T "O3'" H10 sing N N 109 C6T "C4'" H11 sing N N 110 C6T "C5'" H12 sing N N 111 C6T "C5'" H13 sing N N 112 C6T O1A H14 sing N N 113 C6T N3A H15 sing N N 114 C6T O2B H16 sing N N 115 C6T C3B H17 sing N N 116 C6T C3B H18 sing N N 117 C6T O1G H19 sing N N 118 C6T O3G H20 sing N N 119 CYS N CA sing N N 120 CYS N H sing N N 121 CYS N H2 sing N N 122 CYS CA C sing N N 123 CYS CA CB sing N N 124 CYS CA HA sing N N 125 CYS C O doub N N 126 CYS C OXT sing N N 127 CYS CB SG sing N N 128 CYS CB HB2 sing N N 129 CYS CB HB3 sing N N 130 CYS SG HG sing N N 131 CYS OXT HXT sing N N 132 DA OP3 P sing N N 133 DA OP3 HOP3 sing N N 134 DA P OP1 doub N N 135 DA P OP2 sing N N 136 DA P "O5'" sing N N 137 DA OP2 HOP2 sing N N 138 DA "O5'" "C5'" sing N N 139 DA "C5'" "C4'" sing N N 140 DA "C5'" "H5'" sing N N 141 DA "C5'" "H5''" sing N N 142 DA "C4'" "O4'" sing N N 143 DA "C4'" "C3'" sing N N 144 DA "C4'" "H4'" sing N N 145 DA "O4'" "C1'" sing N N 146 DA "C3'" "O3'" sing N N 147 DA "C3'" "C2'" sing N N 148 DA "C3'" "H3'" sing N N 149 DA "O3'" "HO3'" sing N N 150 DA "C2'" "C1'" sing N N 151 DA "C2'" "H2'" sing N N 152 DA "C2'" "H2''" sing N N 153 DA "C1'" N9 sing N N 154 DA "C1'" "H1'" sing N N 155 DA N9 C8 sing Y N 156 DA N9 C4 sing Y N 157 DA C8 N7 doub Y N 158 DA C8 H8 sing N N 159 DA N7 C5 sing Y N 160 DA C5 C6 sing Y N 161 DA C5 C4 doub Y N 162 DA C6 N6 sing N N 163 DA C6 N1 doub Y N 164 DA N6 H61 sing N N 165 DA N6 H62 sing N N 166 DA N1 C2 sing Y N 167 DA C2 N3 doub Y N 168 DA C2 H2 sing N N 169 DA N3 C4 sing Y N 170 DC OP3 P sing N N 171 DC OP3 HOP3 sing N N 172 DC P OP1 doub N N 173 DC P OP2 sing N N 174 DC P "O5'" sing N N 175 DC OP2 HOP2 sing N N 176 DC "O5'" "C5'" sing N N 177 DC "C5'" "C4'" sing N N 178 DC "C5'" "H5'" sing N N 179 DC "C5'" "H5''" sing N N 180 DC "C4'" "O4'" sing N N 181 DC "C4'" "C3'" sing N N 182 DC "C4'" "H4'" sing N N 183 DC "O4'" "C1'" sing N N 184 DC "C3'" "O3'" sing N N 185 DC "C3'" "C2'" sing N N 186 DC "C3'" "H3'" sing N N 187 DC "O3'" "HO3'" sing N N 188 DC "C2'" "C1'" sing N N 189 DC "C2'" "H2'" sing N N 190 DC "C2'" "H2''" sing N N 191 DC "C1'" N1 sing N N 192 DC "C1'" "H1'" sing N N 193 DC N1 C2 sing N N 194 DC N1 C6 sing N N 195 DC C2 O2 doub N N 196 DC C2 N3 sing N N 197 DC N3 C4 doub N N 198 DC C4 N4 sing N N 199 DC C4 C5 sing N N 200 DC N4 H41 sing N N 201 DC N4 H42 sing N N 202 DC C5 C6 doub N N 203 DC C5 H5 sing N N 204 DC C6 H6 sing N N 205 DG OP3 P sing N N 206 DG OP3 HOP3 sing N N 207 DG P OP1 doub N N 208 DG P OP2 sing N N 209 DG P "O5'" sing N N 210 DG OP2 HOP2 sing N N 211 DG "O5'" "C5'" sing N N 212 DG "C5'" "C4'" sing N N 213 DG "C5'" "H5'" sing N N 214 DG "C5'" "H5''" sing N N 215 DG "C4'" "O4'" sing N N 216 DG "C4'" "C3'" sing N N 217 DG "C4'" "H4'" sing N N 218 DG "O4'" "C1'" sing N N 219 DG "C3'" "O3'" sing N N 220 DG "C3'" "C2'" sing N N 221 DG "C3'" "H3'" sing N N 222 DG "O3'" "HO3'" sing N N 223 DG "C2'" "C1'" sing N N 224 DG "C2'" "H2'" sing N N 225 DG "C2'" "H2''" sing N N 226 DG "C1'" N9 sing N N 227 DG "C1'" "H1'" sing N N 228 DG N9 C8 sing Y N 229 DG N9 C4 sing Y N 230 DG C8 N7 doub Y N 231 DG C8 H8 sing N N 232 DG N7 C5 sing Y N 233 DG C5 C6 sing N N 234 DG C5 C4 doub Y N 235 DG C6 O6 doub N N 236 DG C6 N1 sing N N 237 DG N1 C2 sing N N 238 DG N1 H1 sing N N 239 DG C2 N2 sing N N 240 DG C2 N3 doub N N 241 DG N2 H21 sing N N 242 DG N2 H22 sing N N 243 DG N3 C4 sing N N 244 DOC N1 C2 sing N N 245 DOC N1 C6 sing N N 246 DOC N1 "C1'" sing N N 247 DOC C2 N3 sing N N 248 DOC C2 O2 doub N N 249 DOC N3 C4 doub N N 250 DOC C4 C5 sing N N 251 DOC C4 N4 sing N N 252 DOC C5 C6 doub N N 253 DOC C5 H5 sing N N 254 DOC C6 H6 sing N N 255 DOC N4 HN41 sing N N 256 DOC N4 HN42 sing N N 257 DOC "C1'" "C2'" sing N N 258 DOC "C1'" "O4'" sing N N 259 DOC "C1'" "H1'" sing N N 260 DOC "C2'" "C3'" sing N N 261 DOC "C2'" "H2'" sing N N 262 DOC "C2'" "H2''" sing N N 263 DOC "C3'" "C4'" sing N N 264 DOC "C3'" "H3'1" sing N N 265 DOC "C3'" "H3'2" sing N N 266 DOC "C4'" "O4'" sing N N 267 DOC "C4'" "C5'" sing N N 268 DOC "C4'" "H4'" sing N N 269 DOC "C5'" "O5'" sing N N 270 DOC "C5'" "H5'" sing N N 271 DOC "C5'" "H5''" sing N N 272 DOC "O5'" P sing N N 273 DOC P OP1 doub N N 274 DOC P OP2 sing N N 275 DOC P OP3 sing N N 276 DOC OP2 HOP2 sing N N 277 DOC OP3 HOP3 sing N N 278 DT OP3 P sing N N 279 DT OP3 HOP3 sing N N 280 DT P OP1 doub N N 281 DT P OP2 sing N N 282 DT P "O5'" sing N N 283 DT OP2 HOP2 sing N N 284 DT "O5'" "C5'" sing N N 285 DT "C5'" "C4'" sing N N 286 DT "C5'" "H5'" sing N N 287 DT "C5'" "H5''" sing N N 288 DT "C4'" "O4'" sing N N 289 DT "C4'" "C3'" sing N N 290 DT "C4'" "H4'" sing N N 291 DT "O4'" "C1'" sing N N 292 DT "C3'" "O3'" sing N N 293 DT "C3'" "C2'" sing N N 294 DT "C3'" "H3'" sing N N 295 DT "O3'" "HO3'" sing N N 296 DT "C2'" "C1'" sing N N 297 DT "C2'" "H2'" sing N N 298 DT "C2'" "H2''" sing N N 299 DT "C1'" N1 sing N N 300 DT "C1'" "H1'" sing N N 301 DT N1 C2 sing N N 302 DT N1 C6 sing N N 303 DT C2 O2 doub N N 304 DT C2 N3 sing N N 305 DT N3 C4 sing N N 306 DT N3 H3 sing N N 307 DT C4 O4 doub N N 308 DT C4 C5 sing N N 309 DT C5 C7 sing N N 310 DT C5 C6 doub N N 311 DT C7 H71 sing N N 312 DT C7 H72 sing N N 313 DT C7 H73 sing N N 314 DT C6 H6 sing N N 315 GLN N CA sing N N 316 GLN N H sing N N 317 GLN N H2 sing N N 318 GLN CA C sing N N 319 GLN CA CB sing N N 320 GLN CA HA sing N N 321 GLN C O doub N N 322 GLN C OXT sing N N 323 GLN CB CG sing N N 324 GLN CB HB2 sing N N 325 GLN CB HB3 sing N N 326 GLN CG CD sing N N 327 GLN CG HG2 sing N N 328 GLN CG HG3 sing N N 329 GLN CD OE1 doub N N 330 GLN CD NE2 sing N N 331 GLN NE2 HE21 sing N N 332 GLN NE2 HE22 sing N N 333 GLN OXT HXT sing N N 334 GLU N CA sing N N 335 GLU N H sing N N 336 GLU N H2 sing N N 337 GLU CA C sing N N 338 GLU CA CB sing N N 339 GLU CA HA sing N N 340 GLU C O doub N N 341 GLU C OXT sing N N 342 GLU CB CG sing N N 343 GLU CB HB2 sing N N 344 GLU CB HB3 sing N N 345 GLU CG CD sing N N 346 GLU CG HG2 sing N N 347 GLU CG HG3 sing N N 348 GLU CD OE1 doub N N 349 GLU CD OE2 sing N N 350 GLU OE2 HE2 sing N N 351 GLU OXT HXT sing N N 352 GLY N CA sing N N 353 GLY N H sing N N 354 GLY N H2 sing N N 355 GLY CA C sing N N 356 GLY CA HA2 sing N N 357 GLY CA HA3 sing N N 358 GLY C O doub N N 359 GLY C OXT sing N N 360 GLY OXT HXT sing N N 361 HIS N CA sing N N 362 HIS N H sing N N 363 HIS N H2 sing N N 364 HIS CA C sing N N 365 HIS CA CB sing N N 366 HIS CA HA sing N N 367 HIS C O doub N N 368 HIS C OXT sing N N 369 HIS CB CG sing N N 370 HIS CB HB2 sing N N 371 HIS CB HB3 sing N N 372 HIS CG ND1 sing Y N 373 HIS CG CD2 doub Y N 374 HIS ND1 CE1 doub Y N 375 HIS ND1 HD1 sing N N 376 HIS CD2 NE2 sing Y N 377 HIS CD2 HD2 sing N N 378 HIS CE1 NE2 sing Y N 379 HIS CE1 HE1 sing N N 380 HIS NE2 HE2 sing N N 381 HIS OXT HXT sing N N 382 HOH O H1 sing N N 383 HOH O H2 sing N N 384 ILE N CA sing N N 385 ILE N H sing N N 386 ILE N H2 sing N N 387 ILE CA C sing N N 388 ILE CA CB sing N N 389 ILE CA HA sing N N 390 ILE C O doub N N 391 ILE C OXT sing N N 392 ILE CB CG1 sing N N 393 ILE CB CG2 sing N N 394 ILE CB HB sing N N 395 ILE CG1 CD1 sing N N 396 ILE CG1 HG12 sing N N 397 ILE CG1 HG13 sing N N 398 ILE CG2 HG21 sing N N 399 ILE CG2 HG22 sing N N 400 ILE CG2 HG23 sing N N 401 ILE CD1 HD11 sing N N 402 ILE CD1 HD12 sing N N 403 ILE CD1 HD13 sing N N 404 ILE OXT HXT sing N N 405 LEU N CA sing N N 406 LEU N H sing N N 407 LEU N H2 sing N N 408 LEU CA C sing N N 409 LEU CA CB sing N N 410 LEU CA HA sing N N 411 LEU C O doub N N 412 LEU C OXT sing N N 413 LEU CB CG sing N N 414 LEU CB HB2 sing N N 415 LEU CB HB3 sing N N 416 LEU CG CD1 sing N N 417 LEU CG CD2 sing N N 418 LEU CG HG sing N N 419 LEU CD1 HD11 sing N N 420 LEU CD1 HD12 sing N N 421 LEU CD1 HD13 sing N N 422 LEU CD2 HD21 sing N N 423 LEU CD2 HD22 sing N N 424 LEU CD2 HD23 sing N N 425 LEU OXT HXT sing N N 426 LYS N CA sing N N 427 LYS N H sing N N 428 LYS N H2 sing N N 429 LYS CA C sing N N 430 LYS CA CB sing N N 431 LYS CA HA sing N N 432 LYS C O doub N N 433 LYS C OXT sing N N 434 LYS CB CG sing N N 435 LYS CB HB2 sing N N 436 LYS CB HB3 sing N N 437 LYS CG CD sing N N 438 LYS CG HG2 sing N N 439 LYS CG HG3 sing N N 440 LYS CD CE sing N N 441 LYS CD HD2 sing N N 442 LYS CD HD3 sing N N 443 LYS CE NZ sing N N 444 LYS CE HE2 sing N N 445 LYS CE HE3 sing N N 446 LYS NZ HZ1 sing N N 447 LYS NZ HZ2 sing N N 448 LYS NZ HZ3 sing N N 449 LYS OXT HXT sing N N 450 MET N CA sing N N 451 MET N H sing N N 452 MET N H2 sing N N 453 MET CA C sing N N 454 MET CA CB sing N N 455 MET CA HA sing N N 456 MET C O doub N N 457 MET C OXT sing N N 458 MET CB CG sing N N 459 MET CB HB2 sing N N 460 MET CB HB3 sing N N 461 MET CG SD sing N N 462 MET CG HG2 sing N N 463 MET CG HG3 sing N N 464 MET SD CE sing N N 465 MET CE HE1 sing N N 466 MET CE HE2 sing N N 467 MET CE HE3 sing N N 468 MET OXT HXT sing N N 469 PHE N CA sing N N 470 PHE N H sing N N 471 PHE N H2 sing N N 472 PHE CA C sing N N 473 PHE CA CB sing N N 474 PHE CA HA sing N N 475 PHE C O doub N N 476 PHE C OXT sing N N 477 PHE CB CG sing N N 478 PHE CB HB2 sing N N 479 PHE CB HB3 sing N N 480 PHE CG CD1 doub Y N 481 PHE CG CD2 sing Y N 482 PHE CD1 CE1 sing Y N 483 PHE CD1 HD1 sing N N 484 PHE CD2 CE2 doub Y N 485 PHE CD2 HD2 sing N N 486 PHE CE1 CZ doub Y N 487 PHE CE1 HE1 sing N N 488 PHE CE2 CZ sing Y N 489 PHE CE2 HE2 sing N N 490 PHE CZ HZ sing N N 491 PHE OXT HXT sing N N 492 PRO N CA sing N N 493 PRO N CD sing N N 494 PRO N H sing N N 495 PRO CA C sing N N 496 PRO CA CB sing N N 497 PRO CA HA sing N N 498 PRO C O doub N N 499 PRO C OXT sing N N 500 PRO CB CG sing N N 501 PRO CB HB2 sing N N 502 PRO CB HB3 sing N N 503 PRO CG CD sing N N 504 PRO CG HG2 sing N N 505 PRO CG HG3 sing N N 506 PRO CD HD2 sing N N 507 PRO CD HD3 sing N N 508 PRO OXT HXT sing N N 509 SER N CA sing N N 510 SER N H sing N N 511 SER N H2 sing N N 512 SER CA C sing N N 513 SER CA CB sing N N 514 SER CA HA sing N N 515 SER C O doub N N 516 SER C OXT sing N N 517 SER CB OG sing N N 518 SER CB HB2 sing N N 519 SER CB HB3 sing N N 520 SER OG HG sing N N 521 SER OXT HXT sing N N 522 THR N CA sing N N 523 THR N H sing N N 524 THR N H2 sing N N 525 THR CA C sing N N 526 THR CA CB sing N N 527 THR CA HA sing N N 528 THR C O doub N N 529 THR C OXT sing N N 530 THR CB OG1 sing N N 531 THR CB CG2 sing N N 532 THR CB HB sing N N 533 THR OG1 HG1 sing N N 534 THR CG2 HG21 sing N N 535 THR CG2 HG22 sing N N 536 THR CG2 HG23 sing N N 537 THR OXT HXT sing N N 538 TRP N CA sing N N 539 TRP N H sing N N 540 TRP N H2 sing N N 541 TRP CA C sing N N 542 TRP CA CB sing N N 543 TRP CA HA sing N N 544 TRP C O doub N N 545 TRP C OXT sing N N 546 TRP CB CG sing N N 547 TRP CB HB2 sing N N 548 TRP CB HB3 sing N N 549 TRP CG CD1 doub Y N 550 TRP CG CD2 sing Y N 551 TRP CD1 NE1 sing Y N 552 TRP CD1 HD1 sing N N 553 TRP CD2 CE2 doub Y N 554 TRP CD2 CE3 sing Y N 555 TRP NE1 CE2 sing Y N 556 TRP NE1 HE1 sing N N 557 TRP CE2 CZ2 sing Y N 558 TRP CE3 CZ3 doub Y N 559 TRP CE3 HE3 sing N N 560 TRP CZ2 CH2 doub Y N 561 TRP CZ2 HZ2 sing N N 562 TRP CZ3 CH2 sing Y N 563 TRP CZ3 HZ3 sing N N 564 TRP CH2 HH2 sing N N 565 TRP OXT HXT sing N N 566 TYR N CA sing N N 567 TYR N H sing N N 568 TYR N H2 sing N N 569 TYR CA C sing N N 570 TYR CA CB sing N N 571 TYR CA HA sing N N 572 TYR C O doub N N 573 TYR C OXT sing N N 574 TYR CB CG sing N N 575 TYR CB HB2 sing N N 576 TYR CB HB3 sing N N 577 TYR CG CD1 doub Y N 578 TYR CG CD2 sing Y N 579 TYR CD1 CE1 sing Y N 580 TYR CD1 HD1 sing N N 581 TYR CD2 CE2 doub Y N 582 TYR CD2 HD2 sing N N 583 TYR CE1 CZ doub Y N 584 TYR CE1 HE1 sing N N 585 TYR CE2 CZ sing Y N 586 TYR CE2 HE2 sing N N 587 TYR CZ OH sing N N 588 TYR OH HH sing N N 589 TYR OXT HXT sing N N 590 VAL N CA sing N N 591 VAL N H sing N N 592 VAL N H2 sing N N 593 VAL CA C sing N N 594 VAL CA CB sing N N 595 VAL CA HA sing N N 596 VAL C O doub N N 597 VAL C OXT sing N N 598 VAL CB CG1 sing N N 599 VAL CB CG2 sing N N 600 VAL CB HB sing N N 601 VAL CG1 HG11 sing N N 602 VAL CG1 HG12 sing N N 603 VAL CG1 HG13 sing N N 604 VAL CG2 HG21 sing N N 605 VAL CG2 HG22 sing N N 606 VAL CG2 HG23 sing N N 607 VAL OXT HXT sing N N 608 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4RT3 'double helix' 4RT3 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 D DG 5 1_555 -0.226 -0.190 0.085 -11.814 -9.174 -3.510 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 B DC 2 1_555 D DG 4 1_555 0.610 -0.303 0.182 -0.958 -8.878 2.399 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 B DG 3 1_555 D DC 3 1_555 -0.065 -0.087 -0.115 -6.162 -17.806 5.653 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 B DA 4 1_555 D DT 2 1_555 0.081 -0.184 0.309 10.410 -6.925 -5.750 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 B DC 5 1_555 D DG 1 1_555 0.258 -0.064 -0.348 16.253 2.707 0.421 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 B DG 7 1_555 C DOC 10 1_555 -0.050 -0.136 0.376 15.365 -0.100 -0.140 6 T_DG7:DOC10_P T 7 ? P 10 ? 19 1 1 B DC 8 1_555 C DG 9 1_555 0.379 -0.142 -0.560 23.965 -11.547 1.881 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 B DG 9 1_555 C DC 8 1_555 -0.236 -0.220 -0.382 -3.598 0.102 -1.393 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 B DC 10 1_555 C DG 7 1_555 0.287 -0.125 0.146 2.494 -6.898 -1.429 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 B DA 11 1_555 C DT 6 1_555 -0.111 -0.142 0.036 -5.048 -9.954 1.949 10 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 B DT 12 1_555 C DA 5 1_555 0.040 -0.048 0.139 1.897 -8.917 1.915 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 B DC 13 1_555 C DG 4 1_555 0.580 -0.190 -0.116 3.172 -10.828 1.822 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 B DA 14 1_555 C DT 3 1_555 0.324 -0.188 -0.016 -0.144 -13.144 -1.520 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 B DG 15 1_555 C DC 2 1_555 -0.146 -0.161 0.235 5.690 -10.010 -0.645 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 B DC 16 1_555 C DG 1 1_555 0.424 -0.180 0.113 10.298 -9.907 2.367 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 D DG 5 1_555 B DC 2 1_555 D DG 4 1_555 0.008 0.566 3.239 0.921 9.443 33.343 -0.524 0.131 3.272 16.058 -1.566 34.630 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 B DC 2 1_555 D DG 4 1_555 B DG 3 1_555 D DC 3 1_555 -0.073 1.698 3.530 -0.377 0.487 38.431 2.513 0.060 3.551 0.740 0.572 38.436 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 B DG 3 1_555 D DC 3 1_555 B DA 4 1_555 D DT 2 1_555 -0.332 0.027 2.846 -3.579 0.474 31.633 -0.026 0.032 2.865 0.865 6.539 31.833 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 B DA 4 1_555 D DT 2 1_555 B DC 5 1_555 D DG 1 1_555 1.020 -0.518 3.248 4.360 3.377 29.292 -1.717 -1.067 3.282 6.603 -8.526 29.795 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 B DG 7 1_555 C DOC 10 1_555 B DC 8 1_555 C DG 9 1_555 0.664 -0.768 3.157 6.463 4.781 33.960 -1.984 -0.157 3.094 8.046 -10.876 34.871 5 TT_DG7DC8:DG9DOC10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 B DC 8 1_555 C DG 9 1_555 B DG 9 1_555 C DC 8 1_555 -1.327 -0.633 3.933 -3.528 9.662 35.237 -2.593 1.530 3.747 15.555 5.680 36.661 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 B DG 9 1_555 C DC 8 1_555 B DC 10 1_555 C DG 7 1_555 -0.526 -0.513 3.254 -4.033 2.891 32.526 -1.399 0.241 3.238 5.125 7.148 32.892 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 B DC 10 1_555 C DG 7 1_555 B DA 11 1_555 C DT 6 1_555 -0.190 -0.395 3.368 -1.352 6.541 36.484 -1.517 0.114 3.255 10.342 2.137 37.070 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 B DA 11 1_555 C DT 6 1_555 B DT 12 1_555 C DA 5 1_555 -0.017 -0.689 3.135 -1.595 -0.795 31.084 -1.139 -0.261 3.148 -1.482 2.973 31.134 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 B DT 12 1_555 C DA 5 1_555 B DC 13 1_555 C DG 4 1_555 0.336 -0.189 3.141 4.289 2.887 37.980 -0.636 0.006 3.137 4.412 -6.553 38.318 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 B DC 13 1_555 C DG 4 1_555 B DA 14 1_555 C DT 3 1_555 -0.550 0.435 3.438 -0.193 7.694 34.403 -0.501 0.877 3.455 12.811 0.321 35.228 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 B DA 14 1_555 C DT 3 1_555 B DG 15 1_555 C DC 2 1_555 0.290 -0.199 3.100 -3.031 5.447 30.738 -1.331 -1.073 2.980 10.145 5.646 31.349 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 B DG 15 1_555 C DC 2 1_555 B DC 16 1_555 C DG 1 1_555 0.498 -0.641 3.077 0.141 7.771 36.398 -1.959 -0.763 2.886 12.269 -0.223 37.191 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 'CHLORIDE ION' CL 8 "2'-deoxy-5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]amino}phosphoryl]-3,4-dihydrothymidine" C6T 9 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FMS _pdbx_initial_refinement_model.details 'PDB entry 2FMS' #