data_4RTJ # _entry.id 4RTJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI NDB NA3301 ? ? RCSB RCSB087777 ? ? PDB 4RTJ pdb_00004rtj 10.2210/pdb4rtj/pdb WWPDB D_1000087777 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.content_type 2GIP PDB 'Structure of E. coli DNA adenine methyltransferase (DAM)' unspecified 2ORE PDB 'Binary structure of E.coli DAM' unspecified 4RTK PDB . unspecified 4RTL PDB . unspecified 4RTM PDB . unspecified 4RTN PDB . unspecified 4RTO PDB . unspecified 4RTP PDB . unspecified 4RTQ PDB . unspecified 4RTR PDB . unspecified 4RTS PDB . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RTJ _pdbx_database_status.recvd_initial_deposition_date 2014-11-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Horton, J.R.' 1 'Cheng, X.' 2 # _citation.id primary _citation.title ;Structures of Escherichia coli DNA adenine methyltransferase (Dam) in complex with a non-GATC sequence: potential implications for methylation-independent transcriptional repression. ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 43 _citation.page_first 4296 _citation.page_last 4308 _citation.year 2015 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25845600 _citation.pdbx_database_id_DOI 10.1093/nar/gkv251 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Horton, J.R.' 1 ? primary 'Zhang, X.' 2 ? primary 'Blumenthal, R.M.' 3 ? primary 'Cheng, X.' 4 ? # _cell.entry_id 4RTJ _cell.length_a 36.367 _cell.length_b 63.114 _cell.length_c 145.043 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RTJ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA adenine methylase' 34330.961 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*CP*TP*AP*GP*AP*TP*CP*TP*AP*GP*A)-3') ; 3661.416 2 ? ? ? ? 3 non-polymer syn SINEFUNGIN 381.387 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 97 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLI SLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKK PYFPEAELYHFAEKAQNAFFYCESYADSMARADDSSVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERH IPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPAKK ; ;MGSSHHHHHHSSGLVPRGSHMKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLI SLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKK PYFPEAELYHFAEKAQNAFFYCESYADSMARADDSSVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERH IPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPAKK ; A ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DA)(DG)(DA)(DT)(DC)(DT)(DA)(DG)(DA)' TCTAGATCTAGA F,G ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 LYS n 1 23 LYS n 1 24 ASN n 1 25 ARG n 1 26 ALA n 1 27 PHE n 1 28 LEU n 1 29 LYS n 1 30 TRP n 1 31 ALA n 1 32 GLY n 1 33 GLY n 1 34 LYS n 1 35 TYR n 1 36 PRO n 1 37 LEU n 1 38 LEU n 1 39 ASP n 1 40 ASP n 1 41 ILE n 1 42 LYS n 1 43 ARG n 1 44 HIS n 1 45 LEU n 1 46 PRO n 1 47 LYS n 1 48 GLY n 1 49 GLU n 1 50 CYS n 1 51 LEU n 1 52 VAL n 1 53 GLU n 1 54 PRO n 1 55 PHE n 1 56 VAL n 1 57 GLY n 1 58 ALA n 1 59 GLY n 1 60 SER n 1 61 VAL n 1 62 PHE n 1 63 LEU n 1 64 ASN n 1 65 THR n 1 66 ASP n 1 67 PHE n 1 68 SER n 1 69 ARG n 1 70 TYR n 1 71 ILE n 1 72 LEU n 1 73 ALA n 1 74 ASP n 1 75 ILE n 1 76 ASN n 1 77 SER n 1 78 ASP n 1 79 LEU n 1 80 ILE n 1 81 SER n 1 82 LEU n 1 83 TYR n 1 84 ASN n 1 85 ILE n 1 86 VAL n 1 87 LYS n 1 88 MET n 1 89 ARG n 1 90 THR n 1 91 ASP n 1 92 GLU n 1 93 TYR n 1 94 VAL n 1 95 GLN n 1 96 ALA n 1 97 ALA n 1 98 ARG n 1 99 GLU n 1 100 LEU n 1 101 PHE n 1 102 VAL n 1 103 PRO n 1 104 GLU n 1 105 THR n 1 106 ASN n 1 107 CYS n 1 108 ALA n 1 109 GLU n 1 110 VAL n 1 111 TYR n 1 112 TYR n 1 113 GLN n 1 114 PHE n 1 115 ARG n 1 116 GLU n 1 117 GLU n 1 118 PHE n 1 119 ASN n 1 120 LYS n 1 121 SER n 1 122 GLN n 1 123 ASP n 1 124 PRO n 1 125 PHE n 1 126 ARG n 1 127 ARG n 1 128 ALA n 1 129 VAL n 1 130 LEU n 1 131 PHE n 1 132 LEU n 1 133 TYR n 1 134 LEU n 1 135 ASN n 1 136 ARG n 1 137 TYR n 1 138 GLY n 1 139 TYR n 1 140 ASN n 1 141 GLY n 1 142 LEU n 1 143 CYS n 1 144 ARG n 1 145 TYR n 1 146 ASN n 1 147 LEU n 1 148 ARG n 1 149 GLY n 1 150 GLU n 1 151 PHE n 1 152 ASN n 1 153 VAL n 1 154 PRO n 1 155 PHE n 1 156 GLY n 1 157 ARG n 1 158 TYR n 1 159 LYS n 1 160 LYS n 1 161 PRO n 1 162 TYR n 1 163 PHE n 1 164 PRO n 1 165 GLU n 1 166 ALA n 1 167 GLU n 1 168 LEU n 1 169 TYR n 1 170 HIS n 1 171 PHE n 1 172 ALA n 1 173 GLU n 1 174 LYS n 1 175 ALA n 1 176 GLN n 1 177 ASN n 1 178 ALA n 1 179 PHE n 1 180 PHE n 1 181 TYR n 1 182 CYS n 1 183 GLU n 1 184 SER n 1 185 TYR n 1 186 ALA n 1 187 ASP n 1 188 SER n 1 189 MET n 1 190 ALA n 1 191 ARG n 1 192 ALA n 1 193 ASP n 1 194 ASP n 1 195 SER n 1 196 SER n 1 197 VAL n 1 198 VAL n 1 199 TYR n 1 200 CYS n 1 201 ASP n 1 202 PRO n 1 203 PRO n 1 204 TYR n 1 205 ALA n 1 206 PRO n 1 207 LEU n 1 208 SER n 1 209 ALA n 1 210 THR n 1 211 ALA n 1 212 ASN n 1 213 PHE n 1 214 THR n 1 215 ALA n 1 216 TYR n 1 217 HIS n 1 218 THR n 1 219 ASN n 1 220 SER n 1 221 PHE n 1 222 THR n 1 223 LEU n 1 224 GLU n 1 225 GLN n 1 226 GLN n 1 227 ALA n 1 228 HIS n 1 229 LEU n 1 230 ALA n 1 231 GLU n 1 232 ILE n 1 233 ALA n 1 234 GLU n 1 235 GLY n 1 236 LEU n 1 237 VAL n 1 238 GLU n 1 239 ARG n 1 240 HIS n 1 241 ILE n 1 242 PRO n 1 243 VAL n 1 244 LEU n 1 245 ILE n 1 246 SER n 1 247 ASN n 1 248 HIS n 1 249 ASP n 1 250 THR n 1 251 MET n 1 252 LEU n 1 253 THR n 1 254 ARG n 1 255 GLU n 1 256 TRP n 1 257 TYR n 1 258 GLN n 1 259 ARG n 1 260 ALA n 1 261 LYS n 1 262 LEU n 1 263 HIS n 1 264 VAL n 1 265 VAL n 1 266 LYS n 1 267 VAL n 1 268 ARG n 1 269 ARG n 1 270 SER n 1 271 ILE n 1 272 SER n 1 273 SER n 1 274 ASN n 1 275 GLY n 1 276 GLY n 1 277 THR n 1 278 ARG n 1 279 LYS n 1 280 LYS n 1 281 VAL n 1 282 ASP n 1 283 GLU n 1 284 LEU n 1 285 LEU n 1 286 ALA n 1 287 LEU n 1 288 TYR n 1 289 LYS n 1 290 PRO n 1 291 GLY n 1 292 VAL n 1 293 VAL n 1 294 SER n 1 295 PRO n 1 296 ALA n 1 297 LYS n 1 298 LYS n 2 1 DT n 2 2 DC n 2 3 DT n 2 4 DA n 2 5 DG n 2 6 DA n 2 7 DT n 2 8 DC n 2 9 DT n 2 10 DA n 2 11 DG n 2 12 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dam, ECMDS42_2833' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'K-12 substr. MDS42' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1110693 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'HMS174(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP H0Q7C9_ECOLI H0Q7C9 1 ;MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLISLYNIVKMRTDEYVQAAREL FVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRA KLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPAKK ; 1 ? 2 PDB 4RTJ 4RTJ 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4RTJ A 21 ? 298 ? H0Q7C9 1 ? 278 ? 1 278 2 2 4RTJ F 1 ? 12 ? 4RTJ 1 ? 12 ? 1 12 3 2 4RTJ G 1 ? 12 ? 4RTJ 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RTJ MET A 1 ? UNP H0Q7C9 ? ? 'expression tag' -19 1 1 4RTJ GLY A 2 ? UNP H0Q7C9 ? ? 'expression tag' -18 2 1 4RTJ SER A 3 ? UNP H0Q7C9 ? ? 'expression tag' -17 3 1 4RTJ SER A 4 ? UNP H0Q7C9 ? ? 'expression tag' -16 4 1 4RTJ HIS A 5 ? UNP H0Q7C9 ? ? 'expression tag' -15 5 1 4RTJ HIS A 6 ? UNP H0Q7C9 ? ? 'expression tag' -14 6 1 4RTJ HIS A 7 ? UNP H0Q7C9 ? ? 'expression tag' -13 7 1 4RTJ HIS A 8 ? UNP H0Q7C9 ? ? 'expression tag' -12 8 1 4RTJ HIS A 9 ? UNP H0Q7C9 ? ? 'expression tag' -11 9 1 4RTJ HIS A 10 ? UNP H0Q7C9 ? ? 'expression tag' -10 10 1 4RTJ SER A 11 ? UNP H0Q7C9 ? ? 'expression tag' -9 11 1 4RTJ SER A 12 ? UNP H0Q7C9 ? ? 'expression tag' -8 12 1 4RTJ GLY A 13 ? UNP H0Q7C9 ? ? 'expression tag' -7 13 1 4RTJ LEU A 14 ? UNP H0Q7C9 ? ? 'expression tag' -6 14 1 4RTJ VAL A 15 ? UNP H0Q7C9 ? ? 'expression tag' -5 15 1 4RTJ PRO A 16 ? UNP H0Q7C9 ? ? 'expression tag' -4 16 1 4RTJ ARG A 17 ? UNP H0Q7C9 ? ? 'expression tag' -3 17 1 4RTJ GLY A 18 ? UNP H0Q7C9 ? ? 'expression tag' -2 18 1 4RTJ SER A 19 ? UNP H0Q7C9 ? ? 'expression tag' -1 19 1 4RTJ HIS A 20 ? UNP H0Q7C9 ? ? 'expression tag' 0 20 1 4RTJ SER A 195 ? UNP H0Q7C9 ALA 175 'SEE REMARK 999' 175 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SFG non-polymer . SINEFUNGIN ADENOSYL-ORNITHINE 'C15 H23 N7 O5' 381.387 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4RTJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '18% PEG200, 100mM KCl, 10mM MgSO4, 100mM MES buffer, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 289K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2005-07-05 _diffrn_detector.details 'SI(111)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength 1.00000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4RTJ _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 32.509 _reflns.d_resolution_high 1.990 _reflns.number_obs 23469 _reflns.number_all ? _reflns.percent_possible_obs 98.5 _reflns.pdbx_Rmerge_I_obs 0.05100 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.9000 _reflns.B_iso_Wilson_estimate 39.70 _reflns.pdbx_redundancy 7.700 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.99 _reflns_shell.d_res_low 2.06 _reflns_shell.percent_possible_all 98.0 _reflns_shell.Rmerge_I_obs 0.37400 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.500 _reflns_shell.pdbx_redundancy 7.70 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4RTJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 23412 _refine.ls_number_reflns_all 23412 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.50 _refine.ls_d_res_high 1.99 _refine.ls_percent_reflns_obs 98.4 _refine.ls_R_factor_obs 0.215 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.214 _refine.ls_R_factor_R_free 0.236 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.840 _refine.ls_number_reflns_R_free 1132 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2G1P' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.170 _refine.pdbx_overall_phase_error 24.070 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2015 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 2629 _refine_hist.d_res_high 1.99 _refine_hist.d_res_low 32.50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 2646 'X-RAY DIFFRACTION' ? f_angle_d 0.585 ? ? 3693 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 18.216 ? ? 976 'X-RAY DIFFRACTION' ? f_chiral_restr 0.023 ? ? 398 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 394 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.9900 2.0793 2697 0.2662 97.00 0.2869 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.0793 2.1889 2707 0.2462 97.00 0.2520 . . 137 . . . . 'X-RAY DIFFRACTION' . 2.1889 2.3260 2693 0.2467 98.00 0.2516 . . 166 . . . . 'X-RAY DIFFRACTION' . 2.3260 2.5055 2765 0.2444 99.00 0.2615 . . 131 . . . . 'X-RAY DIFFRACTION' . 2.5055 2.7576 2798 0.2440 99.00 0.2750 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.7576 3.1563 2834 0.2385 100.00 0.2515 . . 133 . . . . 'X-RAY DIFFRACTION' . 3.1563 3.9755 2856 0.1921 100.00 0.2251 . . 132 . . . . 'X-RAY DIFFRACTION' . 3.9755 32.5129 2930 0.1935 98.00 0.2166 . . 167 . . . . # _struct.entry_id 4RTJ _struct.title 'A non-cognate complex of Escherichia coli DNA Adenine Methyltransferase (DAM) with DNA and Sinefungin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RTJ _struct_keywords.pdbx_keywords Transferase/DNA _struct_keywords.text ;DAM METHYLATION, GATC RECOGNITION, BASE FLIPPING, BACTERIAL VIRULENCE, methylation-independent transcriptional repressor, Transferase-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 37 ? LEU A 45 ? LEU A 17 LEU A 25 1 ? 9 HELX_P HELX_P2 2 GLY A 59 ? ASN A 64 ? GLY A 39 ASN A 44 1 ? 6 HELX_P HELX_P3 3 ASN A 76 ? ARG A 89 ? ASN A 56 ARG A 69 1 ? 14 HELX_P HELX_P4 4 ARG A 89 ? GLU A 99 ? ARG A 69 GLU A 79 1 ? 11 HELX_P HELX_P5 5 LEU A 100 ? PHE A 101 ? LEU A 80 PHE A 81 5 ? 2 HELX_P HELX_P6 6 VAL A 102 ? ASN A 106 ? VAL A 82 ASN A 86 5 ? 5 HELX_P HELX_P7 7 CYS A 107 ? SER A 121 ? CYS A 87 SER A 101 1 ? 15 HELX_P HELX_P8 8 ASP A 123 ? GLY A 138 ? ASP A 103 GLY A 118 1 ? 16 HELX_P HELX_P9 9 TYR A 139 ? LEU A 142 ? TYR A 119 LEU A 122 5 ? 4 HELX_P HELX_P10 10 PRO A 164 ? GLN A 176 ? PRO A 144 GLN A 156 1 ? 13 HELX_P HELX_P11 11 SER A 184 ? ALA A 190 ? SER A 164 ALA A 170 1 ? 7 HELX_P HELX_P12 12 THR A 222 ? ARG A 239 ? THR A 202 ARG A 219 1 ? 18 HELX_P HELX_P13 13 THR A 250 ? TYR A 257 ? THR A 230 TYR A 237 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 11 N1 ? ? F DC 2 G DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 11 O6 ? ? F DC 2 G DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 11 N2 ? ? F DC 2 G DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 10 N1 ? ? F DT 3 G DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 10 N6 ? ? F DT 3 G DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 9 N3 ? ? F DA 4 G DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 9 O4 ? ? F DA 4 G DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 5 N1 ? ? ? 1_555 C DC 8 N3 ? ? F DG 5 G DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 8 O2 ? ? F DG 5 G DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 5 O6 ? ? ? 1_555 C DC 8 N4 ? ? F DG 5 G DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 7 N3 ? ? F DA 6 G DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 7 O4 ? ? F DA 6 G DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 6 N1 ? ? F DT 7 G DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 6 N6 ? ? F DT 7 G DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 5 N1 ? ? F DC 8 G DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 5 O6 ? ? F DC 8 G DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 5 N2 ? ? F DC 8 G DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 4 N1 ? ? F DT 9 G DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 4 N6 ? ? F DT 9 G DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 3 N3 ? ? F DA 10 G DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 3 O4 ? ? F DA 10 G DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 11 N1 ? ? ? 1_555 C DC 2 N3 ? ? F DG 11 G DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DC 2 O2 ? ? F DG 11 G DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 11 O6 ? ? ? 1_555 C DC 2 N4 ? ? F DG 11 G DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 11 N2 ? ? ? 1_555 C DT 3 O2 ? ? F DG 11 G DT 3 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 178 ? CYS A 182 ? ALA A 158 CYS A 162 A 2 ARG A 69 ? ASP A 74 ? ARG A 49 ASP A 54 A 3 CYS A 50 ? GLU A 53 ? CYS A 30 GLU A 33 A 4 SER A 196 ? CYS A 200 ? SER A 176 CYS A 180 A 5 VAL A 243 ? HIS A 248 ? VAL A 223 HIS A 228 A 6 GLU A 283 ? TYR A 288 ? GLU A 263 TYR A 268 A 7 LYS A 261 ? VAL A 265 ? LYS A 241 VAL A 245 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 179 ? O PHE A 159 N LEU A 72 ? N LEU A 52 A 2 3 O ALA A 73 ? O ALA A 53 N GLU A 53 ? N GLU A 33 A 3 4 N VAL A 52 ? N VAL A 32 O VAL A 197 ? O VAL A 177 A 4 5 N VAL A 198 ? N VAL A 178 O LEU A 244 ? O LEU A 224 A 5 6 N ILE A 245 ? N ILE A 225 O ALA A 286 ? O ALA A 266 A 6 7 O GLU A 283 ? O GLU A 263 N VAL A 265 ? N VAL A 245 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SFG 301 ? 18 'BINDING SITE FOR RESIDUE SFG A 301' AC2 Software A EDO 302 ? 3 'BINDING SITE FOR RESIDUE EDO A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 TRP A 30 ? TRP A 10 . ? 1_555 ? 2 AC1 18 ALA A 31 ? ALA A 11 . ? 1_555 ? 3 AC1 18 GLY A 32 ? GLY A 12 . ? 1_555 ? 4 AC1 18 LYS A 34 ? LYS A 14 . ? 1_555 ? 5 AC1 18 PRO A 54 ? PRO A 34 . ? 1_555 ? 6 AC1 18 PHE A 55 ? PHE A 35 . ? 1_555 ? 7 AC1 18 VAL A 56 ? VAL A 36 . ? 1_555 ? 8 AC1 18 ALA A 58 ? ALA A 38 . ? 1_555 ? 9 AC1 18 GLY A 59 ? GLY A 39 . ? 1_555 ? 10 AC1 18 SER A 60 ? SER A 40 . ? 1_555 ? 11 AC1 18 ASP A 74 ? ASP A 54 . ? 1_555 ? 12 AC1 18 ILE A 75 ? ILE A 55 . ? 1_555 ? 13 AC1 18 SER A 184 ? SER A 164 . ? 1_555 ? 14 AC1 18 TYR A 185 ? TYR A 165 . ? 1_555 ? 15 AC1 18 ASP A 201 ? ASP A 181 . ? 1_555 ? 16 AC1 18 HOH F . ? HOH A 409 . ? 1_555 ? 17 AC1 18 HOH F . ? HOH A 414 . ? 1_555 ? 18 AC1 18 HOH F . ? HOH A 437 . ? 1_555 ? 19 AC2 3 ARG A 115 ? ARG A 95 . ? 1_555 ? 20 AC2 3 GLU A 150 ? GLU A 130 . ? 1_555 ? 21 AC2 3 DA C 10 ? DA G 10 . ? 1_555 ? # _database_PDB_matrix.entry_id 4RTJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4RTJ _atom_sites.fract_transf_matrix[1][1] 0.027497 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015844 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006895 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 ? ? ? A . n A 1 22 LYS 22 2 ? ? ? A . n A 1 23 LYS 23 3 3 LYS LYS A . n A 1 24 ASN 24 4 4 ASN ASN A . n A 1 25 ARG 25 5 5 ARG ARG A . n A 1 26 ALA 26 6 6 ALA ALA A . n A 1 27 PHE 27 7 7 PHE PHE A . n A 1 28 LEU 28 8 8 LEU LEU A . n A 1 29 LYS 29 9 9 LYS LYS A . n A 1 30 TRP 30 10 10 TRP TRP A . n A 1 31 ALA 31 11 11 ALA ALA A . n A 1 32 GLY 32 12 12 GLY GLY A . n A 1 33 GLY 33 13 13 GLY GLY A . n A 1 34 LYS 34 14 14 LYS LYS A . n A 1 35 TYR 35 15 15 TYR TYR A . n A 1 36 PRO 36 16 16 PRO PRO A . n A 1 37 LEU 37 17 17 LEU LEU A . n A 1 38 LEU 38 18 18 LEU LEU A . n A 1 39 ASP 39 19 19 ASP ASP A . n A 1 40 ASP 40 20 20 ASP ASP A . n A 1 41 ILE 41 21 21 ILE ILE A . n A 1 42 LYS 42 22 22 LYS LYS A . n A 1 43 ARG 43 23 23 ARG ARG A . n A 1 44 HIS 44 24 24 HIS HIS A . n A 1 45 LEU 45 25 25 LEU LEU A . n A 1 46 PRO 46 26 26 PRO PRO A . n A 1 47 LYS 47 27 27 LYS LYS A . n A 1 48 GLY 48 28 28 GLY GLY A . n A 1 49 GLU 49 29 29 GLU GLU A . n A 1 50 CYS 50 30 30 CYS CYS A . n A 1 51 LEU 51 31 31 LEU LEU A . n A 1 52 VAL 52 32 32 VAL VAL A . n A 1 53 GLU 53 33 33 GLU GLU A . n A 1 54 PRO 54 34 34 PRO PRO A . n A 1 55 PHE 55 35 35 PHE PHE A . n A 1 56 VAL 56 36 36 VAL VAL A . n A 1 57 GLY 57 37 37 GLY GLY A . n A 1 58 ALA 58 38 38 ALA ALA A . n A 1 59 GLY 59 39 39 GLY GLY A . n A 1 60 SER 60 40 40 SER SER A . n A 1 61 VAL 61 41 41 VAL VAL A . n A 1 62 PHE 62 42 42 PHE PHE A . n A 1 63 LEU 63 43 43 LEU LEU A . n A 1 64 ASN 64 44 44 ASN ASN A . n A 1 65 THR 65 45 45 THR THR A . n A 1 66 ASP 66 46 46 ASP ASP A . n A 1 67 PHE 67 47 47 PHE PHE A . n A 1 68 SER 68 48 48 SER SER A . n A 1 69 ARG 69 49 49 ARG ARG A . n A 1 70 TYR 70 50 50 TYR TYR A . n A 1 71 ILE 71 51 51 ILE ILE A . n A 1 72 LEU 72 52 52 LEU LEU A . n A 1 73 ALA 73 53 53 ALA ALA A . n A 1 74 ASP 74 54 54 ASP ASP A . n A 1 75 ILE 75 55 55 ILE ILE A . n A 1 76 ASN 76 56 56 ASN ASN A . n A 1 77 SER 77 57 57 SER SER A . n A 1 78 ASP 78 58 58 ASP ASP A . n A 1 79 LEU 79 59 59 LEU LEU A . n A 1 80 ILE 80 60 60 ILE ILE A . n A 1 81 SER 81 61 61 SER SER A . n A 1 82 LEU 82 62 62 LEU LEU A . n A 1 83 TYR 83 63 63 TYR TYR A . n A 1 84 ASN 84 64 64 ASN ASN A . n A 1 85 ILE 85 65 65 ILE ILE A . n A 1 86 VAL 86 66 66 VAL VAL A . n A 1 87 LYS 87 67 67 LYS LYS A . n A 1 88 MET 88 68 68 MET MET A . n A 1 89 ARG 89 69 69 ARG ARG A . n A 1 90 THR 90 70 70 THR THR A . n A 1 91 ASP 91 71 71 ASP ASP A . n A 1 92 GLU 92 72 72 GLU GLU A . n A 1 93 TYR 93 73 73 TYR TYR A . n A 1 94 VAL 94 74 74 VAL VAL A . n A 1 95 GLN 95 75 75 GLN GLN A . n A 1 96 ALA 96 76 76 ALA ALA A . n A 1 97 ALA 97 77 77 ALA ALA A . n A 1 98 ARG 98 78 78 ARG ARG A . n A 1 99 GLU 99 79 79 GLU GLU A . n A 1 100 LEU 100 80 80 LEU LEU A . n A 1 101 PHE 101 81 81 PHE PHE A . n A 1 102 VAL 102 82 82 VAL VAL A . n A 1 103 PRO 103 83 83 PRO PRO A . n A 1 104 GLU 104 84 84 GLU GLU A . n A 1 105 THR 105 85 85 THR THR A . n A 1 106 ASN 106 86 86 ASN ASN A . n A 1 107 CYS 107 87 87 CYS CYS A . n A 1 108 ALA 108 88 88 ALA ALA A . n A 1 109 GLU 109 89 89 GLU GLU A . n A 1 110 VAL 110 90 90 VAL VAL A . n A 1 111 TYR 111 91 91 TYR TYR A . n A 1 112 TYR 112 92 92 TYR TYR A . n A 1 113 GLN 113 93 93 GLN GLN A . n A 1 114 PHE 114 94 94 PHE PHE A . n A 1 115 ARG 115 95 95 ARG ARG A . n A 1 116 GLU 116 96 96 GLU GLU A . n A 1 117 GLU 117 97 97 GLU GLU A . n A 1 118 PHE 118 98 98 PHE PHE A . n A 1 119 ASN 119 99 99 ASN ASN A . n A 1 120 LYS 120 100 100 LYS LYS A . n A 1 121 SER 121 101 101 SER SER A . n A 1 122 GLN 122 102 102 GLN GLN A . n A 1 123 ASP 123 103 103 ASP ASP A . n A 1 124 PRO 124 104 104 PRO PRO A . n A 1 125 PHE 125 105 105 PHE PHE A . n A 1 126 ARG 126 106 106 ARG ARG A . n A 1 127 ARG 127 107 107 ARG ARG A . n A 1 128 ALA 128 108 108 ALA ALA A . n A 1 129 VAL 129 109 109 VAL VAL A . n A 1 130 LEU 130 110 110 LEU LEU A . n A 1 131 PHE 131 111 111 PHE PHE A . n A 1 132 LEU 132 112 112 LEU LEU A . n A 1 133 TYR 133 113 113 TYR TYR A . n A 1 134 LEU 134 114 114 LEU LEU A . n A 1 135 ASN 135 115 115 ASN ASN A . n A 1 136 ARG 136 116 116 ARG ARG A . n A 1 137 TYR 137 117 117 TYR TYR A . n A 1 138 GLY 138 118 118 GLY GLY A . n A 1 139 TYR 139 119 119 TYR TYR A . n A 1 140 ASN 140 120 120 ASN ASN A . n A 1 141 GLY 141 121 121 GLY GLY A . n A 1 142 LEU 142 122 122 LEU LEU A . n A 1 143 CYS 143 123 123 CYS CYS A . n A 1 144 ARG 144 124 124 ARG ARG A . n A 1 145 TYR 145 125 125 TYR TYR A . n A 1 146 ASN 146 126 126 ASN ASN A . n A 1 147 LEU 147 127 127 LEU LEU A . n A 1 148 ARG 148 128 128 ARG ARG A . n A 1 149 GLY 149 129 129 GLY GLY A . n A 1 150 GLU 150 130 130 GLU GLU A . n A 1 151 PHE 151 131 131 PHE PHE A . n A 1 152 ASN 152 132 132 ASN ASN A . n A 1 153 VAL 153 133 133 VAL VAL A . n A 1 154 PRO 154 134 134 PRO PRO A . n A 1 155 PHE 155 135 135 PHE PHE A . n A 1 156 GLY 156 136 136 GLY GLY A . n A 1 157 ARG 157 137 137 ARG ARG A . n A 1 158 TYR 158 138 138 TYR TYR A . n A 1 159 LYS 159 139 139 LYS LYS A . n A 1 160 LYS 160 140 140 LYS LYS A . n A 1 161 PRO 161 141 141 PRO PRO A . n A 1 162 TYR 162 142 142 TYR TYR A . n A 1 163 PHE 163 143 143 PHE PHE A . n A 1 164 PRO 164 144 144 PRO PRO A . n A 1 165 GLU 165 145 145 GLU GLU A . n A 1 166 ALA 166 146 146 ALA ALA A . n A 1 167 GLU 167 147 147 GLU GLU A . n A 1 168 LEU 168 148 148 LEU LEU A . n A 1 169 TYR 169 149 149 TYR TYR A . n A 1 170 HIS 170 150 150 HIS HIS A . n A 1 171 PHE 171 151 151 PHE PHE A . n A 1 172 ALA 172 152 152 ALA ALA A . n A 1 173 GLU 173 153 153 GLU GLU A . n A 1 174 LYS 174 154 154 LYS LYS A . n A 1 175 ALA 175 155 155 ALA ALA A . n A 1 176 GLN 176 156 156 GLN GLN A . n A 1 177 ASN 177 157 157 ASN ASN A . n A 1 178 ALA 178 158 158 ALA ALA A . n A 1 179 PHE 179 159 159 PHE PHE A . n A 1 180 PHE 180 160 160 PHE PHE A . n A 1 181 TYR 181 161 161 TYR TYR A . n A 1 182 CYS 182 162 162 CYS CYS A . n A 1 183 GLU 183 163 163 GLU GLU A . n A 1 184 SER 184 164 164 SER SER A . n A 1 185 TYR 185 165 165 TYR TYR A . n A 1 186 ALA 186 166 166 ALA ALA A . n A 1 187 ASP 187 167 167 ASP ASP A . n A 1 188 SER 188 168 168 SER SER A . n A 1 189 MET 189 169 169 MET MET A . n A 1 190 ALA 190 170 170 ALA ALA A . n A 1 191 ARG 191 171 171 ARG ARG A . n A 1 192 ALA 192 172 172 ALA ALA A . n A 1 193 ASP 193 173 173 ASP ASP A . n A 1 194 ASP 194 174 174 ASP ASP A . n A 1 195 SER 195 175 175 SER SER A . n A 1 196 SER 196 176 176 SER SER A . n A 1 197 VAL 197 177 177 VAL VAL A . n A 1 198 VAL 198 178 178 VAL VAL A . n A 1 199 TYR 199 179 179 TYR TYR A . n A 1 200 CYS 200 180 180 CYS CYS A . n A 1 201 ASP 201 181 181 ASP ASP A . n A 1 202 PRO 202 182 182 PRO PRO A . n A 1 203 PRO 203 183 183 PRO PRO A . n A 1 204 TYR 204 184 184 TYR TYR A . n A 1 205 ALA 205 185 185 ALA ALA A . n A 1 206 PRO 206 186 186 PRO PRO A . n A 1 207 LEU 207 187 187 LEU LEU A . n A 1 208 SER 208 188 188 SER SER A . n A 1 209 ALA 209 189 ? ? ? A . n A 1 210 THR 210 190 ? ? ? A . n A 1 211 ALA 211 191 ? ? ? A . n A 1 212 ASN 212 192 ? ? ? A . n A 1 213 PHE 213 193 ? ? ? A . n A 1 214 THR 214 194 ? ? ? A . n A 1 215 ALA 215 195 ? ? ? A . n A 1 216 TYR 216 196 ? ? ? A . n A 1 217 HIS 217 197 ? ? ? A . n A 1 218 THR 218 198 198 THR THR A . n A 1 219 ASN 219 199 199 ASN ASN A . n A 1 220 SER 220 200 200 SER SER A . n A 1 221 PHE 221 201 201 PHE PHE A . n A 1 222 THR 222 202 202 THR THR A . n A 1 223 LEU 223 203 203 LEU LEU A . n A 1 224 GLU 224 204 204 GLU GLU A . n A 1 225 GLN 225 205 205 GLN GLN A . n A 1 226 GLN 226 206 206 GLN GLN A . n A 1 227 ALA 227 207 207 ALA ALA A . n A 1 228 HIS 228 208 208 HIS HIS A . n A 1 229 LEU 229 209 209 LEU LEU A . n A 1 230 ALA 230 210 210 ALA ALA A . n A 1 231 GLU 231 211 211 GLU GLU A . n A 1 232 ILE 232 212 212 ILE ILE A . n A 1 233 ALA 233 213 213 ALA ALA A . n A 1 234 GLU 234 214 214 GLU GLU A . n A 1 235 GLY 235 215 215 GLY GLY A . n A 1 236 LEU 236 216 216 LEU LEU A . n A 1 237 VAL 237 217 217 VAL VAL A . n A 1 238 GLU 238 218 218 GLU GLU A . n A 1 239 ARG 239 219 219 ARG ARG A . n A 1 240 HIS 240 220 220 HIS HIS A . n A 1 241 ILE 241 221 221 ILE ILE A . n A 1 242 PRO 242 222 222 PRO PRO A . n A 1 243 VAL 243 223 223 VAL VAL A . n A 1 244 LEU 244 224 224 LEU LEU A . n A 1 245 ILE 245 225 225 ILE ILE A . n A 1 246 SER 246 226 226 SER SER A . n A 1 247 ASN 247 227 227 ASN ASN A . n A 1 248 HIS 248 228 228 HIS HIS A . n A 1 249 ASP 249 229 229 ASP ASP A . n A 1 250 THR 250 230 230 THR THR A . n A 1 251 MET 251 231 231 MET MET A . n A 1 252 LEU 252 232 232 LEU LEU A . n A 1 253 THR 253 233 233 THR THR A . n A 1 254 ARG 254 234 234 ARG ARG A . n A 1 255 GLU 255 235 235 GLU GLU A . n A 1 256 TRP 256 236 236 TRP TRP A . n A 1 257 TYR 257 237 237 TYR TYR A . n A 1 258 GLN 258 238 238 GLN GLN A . n A 1 259 ARG 259 239 239 ARG ARG A . n A 1 260 ALA 260 240 240 ALA ALA A . n A 1 261 LYS 261 241 241 LYS LYS A . n A 1 262 LEU 262 242 242 LEU LEU A . n A 1 263 HIS 263 243 243 HIS HIS A . n A 1 264 VAL 264 244 244 VAL VAL A . n A 1 265 VAL 265 245 245 VAL VAL A . n A 1 266 LYS 266 246 246 LYS LYS A . n A 1 267 VAL 267 247 247 VAL VAL A . n A 1 268 ARG 268 248 248 ARG ARG A . n A 1 269 ARG 269 249 249 ARG ARG A . n A 1 270 SER 270 250 ? ? ? A . n A 1 271 ILE 271 251 ? ? ? A . n A 1 272 SER 272 252 ? ? ? A . n A 1 273 SER 273 253 ? ? ? A . n A 1 274 ASN 274 254 ? ? ? A . n A 1 275 GLY 275 255 ? ? ? A . n A 1 276 GLY 276 256 ? ? ? A . n A 1 277 THR 277 257 ? ? ? A . n A 1 278 ARG 278 258 258 ARG ARG A . n A 1 279 LYS 279 259 259 LYS LYS A . n A 1 280 LYS 280 260 260 LYS LYS A . n A 1 281 VAL 281 261 261 VAL VAL A . n A 1 282 ASP 282 262 262 ASP ASP A . n A 1 283 GLU 283 263 263 GLU GLU A . n A 1 284 LEU 284 264 264 LEU LEU A . n A 1 285 LEU 285 265 265 LEU LEU A . n A 1 286 ALA 286 266 266 ALA ALA A . n A 1 287 LEU 287 267 267 LEU LEU A . n A 1 288 TYR 288 268 268 TYR TYR A . n A 1 289 LYS 289 269 269 LYS LYS A . n A 1 290 PRO 290 270 270 PRO PRO A . n A 1 291 GLY 291 271 ? ? ? A . n A 1 292 VAL 292 272 ? ? ? A . n A 1 293 VAL 293 273 ? ? ? A . n A 1 294 SER 294 274 ? ? ? A . n A 1 295 PRO 295 275 ? ? ? A . n A 1 296 ALA 296 276 ? ? ? A . n A 1 297 LYS 297 277 ? ? ? A . n A 1 298 LYS 298 278 ? ? ? A . n B 2 1 DT 1 1 1 DT DT F . n B 2 2 DC 2 2 2 DC DC F . n B 2 3 DT 3 3 3 DT DT F . n B 2 4 DA 4 4 4 DA DA F . n B 2 5 DG 5 5 5 DG DG F . n B 2 6 DA 6 6 6 DA DA F . n B 2 7 DT 7 7 7 DT DT F . n B 2 8 DC 8 8 8 DC DC F . n B 2 9 DT 9 9 9 DT DT F . n B 2 10 DA 10 10 10 DA DA F . n B 2 11 DG 11 11 11 DG DG F . n B 2 12 DA 12 12 12 DA DA F . n C 2 1 DT 1 1 1 DT DT G . n C 2 2 DC 2 2 2 DC DC G . n C 2 3 DT 3 3 3 DT DT G . n C 2 4 DA 4 4 4 DA DA G . n C 2 5 DG 5 5 5 DG DG G . n C 2 6 DA 6 6 6 DA DA G . n C 2 7 DT 7 7 7 DT DT G . n C 2 8 DC 8 8 8 DC DC G . n C 2 9 DT 9 9 9 DT DT G . n C 2 10 DA 10 10 10 DA DA G . n C 2 11 DG 11 11 11 DG DG G . n C 2 12 DA 12 12 12 DA DA G . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SFG 1 301 301 SFG SFG A . E 4 EDO 1 302 1 EDO EDO A . F 5 HOH 1 401 1 HOH HOH A . F 5 HOH 2 402 2 HOH HOH A . F 5 HOH 3 403 3 HOH HOH A . F 5 HOH 4 404 4 HOH HOH A . F 5 HOH 5 405 5 HOH HOH A . F 5 HOH 6 406 6 HOH HOH A . F 5 HOH 7 407 7 HOH HOH A . F 5 HOH 8 408 10 HOH HOH A . F 5 HOH 9 409 12 HOH HOH A . F 5 HOH 10 410 13 HOH HOH A . F 5 HOH 11 411 14 HOH HOH A . F 5 HOH 12 412 15 HOH HOH A . F 5 HOH 13 413 16 HOH HOH A . F 5 HOH 14 414 17 HOH HOH A . F 5 HOH 15 415 18 HOH HOH A . F 5 HOH 16 416 19 HOH HOH A . F 5 HOH 17 417 20 HOH HOH A . F 5 HOH 18 418 23 HOH HOH A . F 5 HOH 19 419 24 HOH HOH A . F 5 HOH 20 420 25 HOH HOH A . F 5 HOH 21 421 27 HOH HOH A . F 5 HOH 22 422 28 HOH HOH A . F 5 HOH 23 423 29 HOH HOH A . F 5 HOH 24 424 39 HOH HOH A . F 5 HOH 25 425 40 HOH HOH A . F 5 HOH 26 426 41 HOH HOH A . F 5 HOH 27 427 42 HOH HOH A . F 5 HOH 28 428 43 HOH HOH A . F 5 HOH 29 429 44 HOH HOH A . F 5 HOH 30 430 46 HOH HOH A . F 5 HOH 31 431 47 HOH HOH A . F 5 HOH 32 432 48 HOH HOH A . F 5 HOH 33 433 49 HOH HOH A . F 5 HOH 34 434 50 HOH HOH A . F 5 HOH 35 435 58 HOH HOH A . F 5 HOH 36 436 60 HOH HOH A . F 5 HOH 37 437 61 HOH HOH A . F 5 HOH 38 438 63 HOH HOH A . F 5 HOH 39 439 67 HOH HOH A . F 5 HOH 40 440 68 HOH HOH A . F 5 HOH 41 441 69 HOH HOH A . F 5 HOH 42 442 70 HOH HOH A . F 5 HOH 43 443 71 HOH HOH A . F 5 HOH 44 444 73 HOH HOH A . F 5 HOH 45 445 74 HOH HOH A . F 5 HOH 46 446 75 HOH HOH A . F 5 HOH 47 447 77 HOH HOH A . F 5 HOH 48 448 79 HOH HOH A . F 5 HOH 49 449 80 HOH HOH A . F 5 HOH 50 450 81 HOH HOH A . F 5 HOH 51 451 88 HOH HOH A . F 5 HOH 52 452 89 HOH HOH A . F 5 HOH 53 453 92 HOH HOH A . F 5 HOH 54 454 93 HOH HOH A . F 5 HOH 55 455 98 HOH HOH A . F 5 HOH 56 456 99 HOH HOH A . F 5 HOH 57 457 101 HOH HOH A . F 5 HOH 58 458 102 HOH HOH A . F 5 HOH 59 459 112 HOH HOH A . F 5 HOH 60 460 113 HOH HOH A . F 5 HOH 61 461 114 HOH HOH A . F 5 HOH 62 462 116 HOH HOH A . F 5 HOH 63 463 119 HOH HOH A . F 5 HOH 64 464 120 HOH HOH A . F 5 HOH 65 465 121 HOH HOH A . F 5 HOH 66 466 122 HOH HOH A . F 5 HOH 67 467 123 HOH HOH A . F 5 HOH 68 468 124 HOH HOH A . F 5 HOH 69 469 125 HOH HOH A . F 5 HOH 70 470 127 HOH HOH A . F 5 HOH 71 471 128 HOH HOH A . F 5 HOH 72 472 130 HOH HOH A . F 5 HOH 73 473 132 HOH HOH A . F 5 HOH 74 474 133 HOH HOH A . F 5 HOH 75 475 134 HOH HOH A . G 5 HOH 1 101 30 HOH HOH F . G 5 HOH 2 102 31 HOH HOH F . G 5 HOH 3 103 32 HOH HOH F . G 5 HOH 4 104 34 HOH HOH F . G 5 HOH 5 105 35 HOH HOH F . G 5 HOH 6 106 36 HOH HOH F . G 5 HOH 7 107 37 HOH HOH F . G 5 HOH 8 108 53 HOH HOH F . G 5 HOH 9 109 64 HOH HOH F . G 5 HOH 10 110 78 HOH HOH F . G 5 HOH 11 111 84 HOH HOH F . G 5 HOH 12 112 87 HOH HOH F . G 5 HOH 13 113 129 HOH HOH F . H 5 HOH 1 101 33 HOH HOH G . H 5 HOH 2 102 51 HOH HOH G . H 5 HOH 3 103 52 HOH HOH G . H 5 HOH 4 104 62 HOH HOH G . H 5 HOH 5 105 65 HOH HOH G . H 5 HOH 6 106 85 HOH HOH G . H 5 HOH 7 107 86 HOH HOH G . H 5 HOH 8 108 94 HOH HOH G . H 5 HOH 9 109 131 HOH HOH G . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1930 ? 1 MORE -6 ? 1 'SSA (A^2)' 16270 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-15 2 'Structure model' 1 1 2015-04-22 3 'Structure model' 1 2 2015-05-20 4 'Structure model' 1 3 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -12.7497 -3.5599 89.9391 0.4654 0.5699 0.6250 0.0561 -0.2055 -0.0274 1.6582 1.9787 3.1235 0.5728 0.7043 0.5402 0.3642 -0.1605 -0.1327 0.5074 -0.5152 0.8810 -0.6577 0.1692 -0.6015 'X-RAY DIFFRACTION' 2 ? refined -5.2201 3.4341 102.1932 0.1934 0.2544 0.2475 0.0352 -0.0300 0.0271 3.1639 4.0762 2.7505 -0.3350 0.9026 -0.2802 0.0876 0.0424 -0.1100 -0.1295 -0.1377 0.2094 0.1224 0.0557 -0.2649 'X-RAY DIFFRACTION' 3 ? refined -3.2514 -5.8626 78.0537 0.6849 0.9136 0.4826 0.2715 -0.1570 -0.2323 4.8726 4.3584 3.9964 -0.4490 -0.4741 -0.3770 0.7482 -0.4785 -0.2093 1.7096 -0.7058 0.1677 -0.7761 0.6491 0.1716 'X-RAY DIFFRACTION' 4 ? refined 19.7954 17.5147 86.3693 0.3491 0.6470 0.5462 -0.0196 0.0503 0.1771 5.5505 8.3224 7.2649 0.1448 2.6504 0.2475 -0.5172 0.1923 0.1574 1.3205 1.0483 -0.4282 -0.3672 0.2114 -0.0778 'X-RAY DIFFRACTION' 5 ? refined 18.5379 19.0744 88.0119 0.3537 0.4761 0.5873 0.0028 -0.0614 0.1445 7.4588 3.4503 5.3088 3.3489 -0.7523 -2.2012 -0.5350 0.1958 0.1534 0.7914 0.3889 -0.3287 -0.1648 -0.0103 0.1950 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 3 A 39 '( CHAIN A AND RESID 3:39 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 40 A 180 '( CHAIN A AND RESID 40:180 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 181 A 270 '( CHAIN A AND RESID 181:270 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 F 1 F 12 '( CHAIN F AND RESID 1:12 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 G 1 G 12 '( CHAIN G AND RESID 1:12 )' ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SERGUI 'data collection' . ? 1 GLRF phasing . ? 2 PHENIX refinement '(phenix.refine: 1.9_1692)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4RTJ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'AUTHOR STATES THAT RESIDUES 175 WERE MODELED AS SER INSTEAD OF ALA BECAUSE OF EXTRA DENSITY.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 81 ? ? -100.24 55.43 2 1 ASN A 120 ? ? 54.77 18.63 3 1 LYS A 140 ? ? -154.62 87.97 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 27 ? CG ? A LYS 47 CG 2 1 Y 1 A LYS 27 ? CD ? A LYS 47 CD 3 1 Y 1 A LYS 27 ? CE ? A LYS 47 CE 4 1 Y 1 A LYS 27 ? NZ ? A LYS 47 NZ 5 1 Y 1 A GLU 29 ? CG ? A GLU 49 CG 6 1 Y 1 A GLU 29 ? CD ? A GLU 49 CD 7 1 Y 1 A GLU 29 ? OE1 ? A GLU 49 OE1 8 1 Y 1 A GLU 29 ? OE2 ? A GLU 49 OE2 9 1 Y 1 A GLN 75 ? CG ? A GLN 95 CG 10 1 Y 1 A GLN 75 ? CD ? A GLN 95 CD 11 1 Y 1 A GLN 75 ? OE1 ? A GLN 95 OE1 12 1 Y 1 A GLN 75 ? NE2 ? A GLN 95 NE2 13 1 Y 0 A ARG 137 ? NE ? A ARG 157 NE 14 1 Y 0 A ARG 137 ? CZ ? A ARG 157 CZ 15 1 Y 0 A ARG 137 ? NH1 ? A ARG 157 NH1 16 1 Y 0 A ARG 137 ? NH2 ? A ARG 157 NH2 17 1 Y 0 A LYS 139 ? CD ? A LYS 159 CD 18 1 Y 0 A LYS 139 ? CE ? A LYS 159 CE 19 1 Y 0 A LYS 139 ? NZ ? A LYS 159 NZ 20 1 Y 1 A ASP 173 ? CG ? A ASP 193 CG 21 1 Y 1 A ASP 173 ? OD1 ? A ASP 193 OD1 22 1 Y 1 A ASP 173 ? OD2 ? A ASP 193 OD2 23 1 Y 1 A ASP 174 ? CG ? A ASP 194 CG 24 1 Y 1 A ASP 174 ? OD1 ? A ASP 194 OD1 25 1 Y 1 A ASP 174 ? OD2 ? A ASP 194 OD2 26 1 Y 1 A SER 175 ? OG ? A SER 195 OG 27 1 Y 1 A SER 188 ? OG ? A SER 208 OG 28 1 Y 1 A SER 200 ? OG ? A SER 220 OG 29 1 Y 1 A HIS 220 ? CG ? A HIS 240 CG 30 1 Y 1 A HIS 220 ? ND1 ? A HIS 240 ND1 31 1 Y 1 A HIS 220 ? CD2 ? A HIS 240 CD2 32 1 Y 1 A HIS 220 ? CE1 ? A HIS 240 CE1 33 1 Y 1 A HIS 220 ? NE2 ? A HIS 240 NE2 34 1 Y 1 A MET 231 ? CG ? A MET 251 CG 35 1 Y 1 A MET 231 ? SD ? A MET 251 SD 36 1 Y 1 A MET 231 ? CE ? A MET 251 CE 37 1 Y 1 A ARG 239 ? CG ? A ARG 259 CG 38 1 Y 1 A ARG 239 ? CD ? A ARG 259 CD 39 1 Y 1 A ARG 239 ? NE ? A ARG 259 NE 40 1 Y 1 A ARG 239 ? CZ ? A ARG 259 CZ 41 1 Y 1 A ARG 239 ? NH1 ? A ARG 259 NH1 42 1 Y 1 A ARG 239 ? NH2 ? A ARG 259 NH2 43 1 Y 1 A LYS 241 ? CG ? A LYS 261 CG 44 1 Y 1 A LYS 241 ? CD ? A LYS 261 CD 45 1 Y 1 A LYS 241 ? CE ? A LYS 261 CE 46 1 Y 1 A LYS 241 ? NZ ? A LYS 261 NZ 47 1 Y 1 A LYS 246 ? CG ? A LYS 266 CG 48 1 Y 1 A LYS 246 ? CD ? A LYS 266 CD 49 1 Y 1 A LYS 246 ? CE ? A LYS 266 CE 50 1 Y 1 A LYS 246 ? NZ ? A LYS 266 NZ 51 1 Y 1 A VAL 247 ? CG1 ? A VAL 267 CG1 52 1 Y 1 A VAL 247 ? CG2 ? A VAL 267 CG2 53 1 Y 1 A ARG 248 ? CG ? A ARG 268 CG 54 1 Y 1 A ARG 248 ? CD ? A ARG 268 CD 55 1 Y 1 A ARG 248 ? NE ? A ARG 268 NE 56 1 Y 1 A ARG 248 ? CZ ? A ARG 268 CZ 57 1 Y 1 A ARG 248 ? NH1 ? A ARG 268 NH1 58 1 Y 1 A ARG 248 ? NH2 ? A ARG 268 NH2 59 1 Y 1 A ARG 258 ? CG ? A ARG 278 CG 60 1 Y 1 A ARG 258 ? CD ? A ARG 278 CD 61 1 Y 1 A ARG 258 ? NE ? A ARG 278 NE 62 1 Y 1 A ARG 258 ? CZ ? A ARG 278 CZ 63 1 Y 1 A ARG 258 ? NH1 ? A ARG 278 NH1 64 1 Y 1 A ARG 258 ? NH2 ? A ARG 278 NH2 65 1 Y 1 A LYS 259 ? CG ? A LYS 279 CG 66 1 Y 1 A LYS 259 ? CD ? A LYS 279 CD 67 1 Y 1 A LYS 259 ? CE ? A LYS 279 CE 68 1 Y 1 A LYS 259 ? NZ ? A LYS 279 NZ 69 1 Y 1 A LYS 260 ? CG ? A LYS 280 CG 70 1 Y 1 A LYS 260 ? CD ? A LYS 280 CD 71 1 Y 1 A LYS 260 ? CE ? A LYS 280 CE 72 1 Y 1 A LYS 260 ? NZ ? A LYS 280 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MET 1 ? A MET 21 22 1 Y 1 A LYS 2 ? A LYS 22 23 1 Y 1 A ALA 189 ? A ALA 209 24 1 Y 1 A THR 190 ? A THR 210 25 1 Y 1 A ALA 191 ? A ALA 211 26 1 Y 1 A ASN 192 ? A ASN 212 27 1 Y 1 A PHE 193 ? A PHE 213 28 1 Y 1 A THR 194 ? A THR 214 29 1 Y 1 A ALA 195 ? A ALA 215 30 1 Y 1 A TYR 196 ? A TYR 216 31 1 Y 1 A HIS 197 ? A HIS 217 32 1 Y 1 A SER 250 ? A SER 270 33 1 Y 1 A ILE 251 ? A ILE 271 34 1 Y 1 A SER 252 ? A SER 272 35 1 Y 1 A SER 253 ? A SER 273 36 1 Y 1 A ASN 254 ? A ASN 274 37 1 Y 1 A GLY 255 ? A GLY 275 38 1 Y 1 A GLY 256 ? A GLY 276 39 1 Y 1 A THR 257 ? A THR 277 40 1 Y 1 A GLY 271 ? A GLY 291 41 1 Y 1 A VAL 272 ? A VAL 292 42 1 Y 1 A VAL 273 ? A VAL 293 43 1 Y 1 A SER 274 ? A SER 294 44 1 Y 1 A PRO 275 ? A PRO 295 45 1 Y 1 A ALA 276 ? A ALA 296 46 1 Y 1 A LYS 277 ? A LYS 297 47 1 Y 1 A LYS 278 ? A LYS 298 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EDO C1 C N N 231 EDO O1 O N N 232 EDO C2 C N N 233 EDO O2 O N N 234 EDO H11 H N N 235 EDO H12 H N N 236 EDO HO1 H N N 237 EDO H21 H N N 238 EDO H22 H N N 239 EDO HO2 H N N 240 GLN N N N N 241 GLN CA C N S 242 GLN C C N N 243 GLN O O N N 244 GLN CB C N N 245 GLN CG C N N 246 GLN CD C N N 247 GLN OE1 O N N 248 GLN NE2 N N N 249 GLN OXT O N N 250 GLN H H N N 251 GLN H2 H N N 252 GLN HA H N N 253 GLN HB2 H N N 254 GLN HB3 H N N 255 GLN HG2 H N N 256 GLN HG3 H N N 257 GLN HE21 H N N 258 GLN HE22 H N N 259 GLN HXT H N N 260 GLU N N N N 261 GLU CA C N S 262 GLU C C N N 263 GLU O O N N 264 GLU CB C N N 265 GLU CG C N N 266 GLU CD C N N 267 GLU OE1 O N N 268 GLU OE2 O N N 269 GLU OXT O N N 270 GLU H H N N 271 GLU H2 H N N 272 GLU HA H N N 273 GLU HB2 H N N 274 GLU HB3 H N N 275 GLU HG2 H N N 276 GLU HG3 H N N 277 GLU HE2 H N N 278 GLU HXT H N N 279 GLY N N N N 280 GLY CA C N N 281 GLY C C N N 282 GLY O O N N 283 GLY OXT O N N 284 GLY H H N N 285 GLY H2 H N N 286 GLY HA2 H N N 287 GLY HA3 H N N 288 GLY HXT H N N 289 HIS N N N N 290 HIS CA C N S 291 HIS C C N N 292 HIS O O N N 293 HIS CB C N N 294 HIS CG C Y N 295 HIS ND1 N Y N 296 HIS CD2 C Y N 297 HIS CE1 C Y N 298 HIS NE2 N Y N 299 HIS OXT O N N 300 HIS H H N N 301 HIS H2 H N N 302 HIS HA H N N 303 HIS HB2 H N N 304 HIS HB3 H N N 305 HIS HD1 H N N 306 HIS HD2 H N N 307 HIS HE1 H N N 308 HIS HE2 H N N 309 HIS HXT H N N 310 HOH O O N N 311 HOH H1 H N N 312 HOH H2 H N N 313 ILE N N N N 314 ILE CA C N S 315 ILE C C N N 316 ILE O O N N 317 ILE CB C N S 318 ILE CG1 C N N 319 ILE CG2 C N N 320 ILE CD1 C N N 321 ILE OXT O N N 322 ILE H H N N 323 ILE H2 H N N 324 ILE HA H N N 325 ILE HB H N N 326 ILE HG12 H N N 327 ILE HG13 H N N 328 ILE HG21 H N N 329 ILE HG22 H N N 330 ILE HG23 H N N 331 ILE HD11 H N N 332 ILE HD12 H N N 333 ILE HD13 H N N 334 ILE HXT H N N 335 LEU N N N N 336 LEU CA C N S 337 LEU C C N N 338 LEU O O N N 339 LEU CB C N N 340 LEU CG C N N 341 LEU CD1 C N N 342 LEU CD2 C N N 343 LEU OXT O N N 344 LEU H H N N 345 LEU H2 H N N 346 LEU HA H N N 347 LEU HB2 H N N 348 LEU HB3 H N N 349 LEU HG H N N 350 LEU HD11 H N N 351 LEU HD12 H N N 352 LEU HD13 H N N 353 LEU HD21 H N N 354 LEU HD22 H N N 355 LEU HD23 H N N 356 LEU HXT H N N 357 LYS N N N N 358 LYS CA C N S 359 LYS C C N N 360 LYS O O N N 361 LYS CB C N N 362 LYS CG C N N 363 LYS CD C N N 364 LYS CE C N N 365 LYS NZ N N N 366 LYS OXT O N N 367 LYS H H N N 368 LYS H2 H N N 369 LYS HA H N N 370 LYS HB2 H N N 371 LYS HB3 H N N 372 LYS HG2 H N N 373 LYS HG3 H N N 374 LYS HD2 H N N 375 LYS HD3 H N N 376 LYS HE2 H N N 377 LYS HE3 H N N 378 LYS HZ1 H N N 379 LYS HZ2 H N N 380 LYS HZ3 H N N 381 LYS HXT H N N 382 MET N N N N 383 MET CA C N S 384 MET C C N N 385 MET O O N N 386 MET CB C N N 387 MET CG C N N 388 MET SD S N N 389 MET CE C N N 390 MET OXT O N N 391 MET H H N N 392 MET H2 H N N 393 MET HA H N N 394 MET HB2 H N N 395 MET HB3 H N N 396 MET HG2 H N N 397 MET HG3 H N N 398 MET HE1 H N N 399 MET HE2 H N N 400 MET HE3 H N N 401 MET HXT H N N 402 PHE N N N N 403 PHE CA C N S 404 PHE C C N N 405 PHE O O N N 406 PHE CB C N N 407 PHE CG C Y N 408 PHE CD1 C Y N 409 PHE CD2 C Y N 410 PHE CE1 C Y N 411 PHE CE2 C Y N 412 PHE CZ C Y N 413 PHE OXT O N N 414 PHE H H N N 415 PHE H2 H N N 416 PHE HA H N N 417 PHE HB2 H N N 418 PHE HB3 H N N 419 PHE HD1 H N N 420 PHE HD2 H N N 421 PHE HE1 H N N 422 PHE HE2 H N N 423 PHE HZ H N N 424 PHE HXT H N N 425 PRO N N N N 426 PRO CA C N S 427 PRO C C N N 428 PRO O O N N 429 PRO CB C N N 430 PRO CG C N N 431 PRO CD C N N 432 PRO OXT O N N 433 PRO H H N N 434 PRO HA H N N 435 PRO HB2 H N N 436 PRO HB3 H N N 437 PRO HG2 H N N 438 PRO HG3 H N N 439 PRO HD2 H N N 440 PRO HD3 H N N 441 PRO HXT H N N 442 SER N N N N 443 SER CA C N S 444 SER C C N N 445 SER O O N N 446 SER CB C N N 447 SER OG O N N 448 SER OXT O N N 449 SER H H N N 450 SER H2 H N N 451 SER HA H N N 452 SER HB2 H N N 453 SER HB3 H N N 454 SER HG H N N 455 SER HXT H N N 456 SFG N N N N 457 SFG CA C N S 458 SFG C C N N 459 SFG O O N N 460 SFG OXT O N N 461 SFG CB C N N 462 SFG CG C N N 463 SFG CD C N S 464 SFG NE N N N 465 SFG "C5'" C N N 466 SFG "C4'" C N R 467 SFG "O4'" O N N 468 SFG "C3'" C N S 469 SFG "O3'" O N N 470 SFG "C2'" C N R 471 SFG "O2'" O N N 472 SFG "C1'" C N R 473 SFG N9 N Y N 474 SFG C8 C Y N 475 SFG N7 N Y N 476 SFG C5 C Y N 477 SFG C6 C Y N 478 SFG N6 N N N 479 SFG N1 N Y N 480 SFG C2 C Y N 481 SFG N3 N Y N 482 SFG C4 C Y N 483 SFG HN1 H N N 484 SFG HN2 H N N 485 SFG HA H N N 486 SFG HXT H N N 487 SFG HB1 H N N 488 SFG HB2 H N N 489 SFG HG1 H N N 490 SFG HG2 H N N 491 SFG HD H N N 492 SFG HNE1 H N N 493 SFG HNE2 H N N 494 SFG "H5'1" H N N 495 SFG "H5'2" H N N 496 SFG "H4'" H N N 497 SFG "H3'" H N N 498 SFG "HO3'" H N N 499 SFG "H2'" H N N 500 SFG "HO2'" H N N 501 SFG "H1'" H N N 502 SFG H8 H N N 503 SFG HN61 H N N 504 SFG HN62 H N N 505 SFG H2 H N N 506 THR N N N N 507 THR CA C N S 508 THR C C N N 509 THR O O N N 510 THR CB C N R 511 THR OG1 O N N 512 THR CG2 C N N 513 THR OXT O N N 514 THR H H N N 515 THR H2 H N N 516 THR HA H N N 517 THR HB H N N 518 THR HG1 H N N 519 THR HG21 H N N 520 THR HG22 H N N 521 THR HG23 H N N 522 THR HXT H N N 523 TRP N N N N 524 TRP CA C N S 525 TRP C C N N 526 TRP O O N N 527 TRP CB C N N 528 TRP CG C Y N 529 TRP CD1 C Y N 530 TRP CD2 C Y N 531 TRP NE1 N Y N 532 TRP CE2 C Y N 533 TRP CE3 C Y N 534 TRP CZ2 C Y N 535 TRP CZ3 C Y N 536 TRP CH2 C Y N 537 TRP OXT O N N 538 TRP H H N N 539 TRP H2 H N N 540 TRP HA H N N 541 TRP HB2 H N N 542 TRP HB3 H N N 543 TRP HD1 H N N 544 TRP HE1 H N N 545 TRP HE3 H N N 546 TRP HZ2 H N N 547 TRP HZ3 H N N 548 TRP HH2 H N N 549 TRP HXT H N N 550 TYR N N N N 551 TYR CA C N S 552 TYR C C N N 553 TYR O O N N 554 TYR CB C N N 555 TYR CG C Y N 556 TYR CD1 C Y N 557 TYR CD2 C Y N 558 TYR CE1 C Y N 559 TYR CE2 C Y N 560 TYR CZ C Y N 561 TYR OH O N N 562 TYR OXT O N N 563 TYR H H N N 564 TYR H2 H N N 565 TYR HA H N N 566 TYR HB2 H N N 567 TYR HB3 H N N 568 TYR HD1 H N N 569 TYR HD2 H N N 570 TYR HE1 H N N 571 TYR HE2 H N N 572 TYR HH H N N 573 TYR HXT H N N 574 VAL N N N N 575 VAL CA C N S 576 VAL C C N N 577 VAL O O N N 578 VAL CB C N N 579 VAL CG1 C N N 580 VAL CG2 C N N 581 VAL OXT O N N 582 VAL H H N N 583 VAL H2 H N N 584 VAL HA H N N 585 VAL HB H N N 586 VAL HG11 H N N 587 VAL HG12 H N N 588 VAL HG13 H N N 589 VAL HG21 H N N 590 VAL HG22 H N N 591 VAL HG23 H N N 592 VAL HXT H N N 593 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDO C1 O1 sing N N 232 EDO C1 C2 sing N N 233 EDO C1 H11 sing N N 234 EDO C1 H12 sing N N 235 EDO O1 HO1 sing N N 236 EDO C2 O2 sing N N 237 EDO C2 H21 sing N N 238 EDO C2 H22 sing N N 239 EDO O2 HO2 sing N N 240 GLN N CA sing N N 241 GLN N H sing N N 242 GLN N H2 sing N N 243 GLN CA C sing N N 244 GLN CA CB sing N N 245 GLN CA HA sing N N 246 GLN C O doub N N 247 GLN C OXT sing N N 248 GLN CB CG sing N N 249 GLN CB HB2 sing N N 250 GLN CB HB3 sing N N 251 GLN CG CD sing N N 252 GLN CG HG2 sing N N 253 GLN CG HG3 sing N N 254 GLN CD OE1 doub N N 255 GLN CD NE2 sing N N 256 GLN NE2 HE21 sing N N 257 GLN NE2 HE22 sing N N 258 GLN OXT HXT sing N N 259 GLU N CA sing N N 260 GLU N H sing N N 261 GLU N H2 sing N N 262 GLU CA C sing N N 263 GLU CA CB sing N N 264 GLU CA HA sing N N 265 GLU C O doub N N 266 GLU C OXT sing N N 267 GLU CB CG sing N N 268 GLU CB HB2 sing N N 269 GLU CB HB3 sing N N 270 GLU CG CD sing N N 271 GLU CG HG2 sing N N 272 GLU CG HG3 sing N N 273 GLU CD OE1 doub N N 274 GLU CD OE2 sing N N 275 GLU OE2 HE2 sing N N 276 GLU OXT HXT sing N N 277 GLY N CA sing N N 278 GLY N H sing N N 279 GLY N H2 sing N N 280 GLY CA C sing N N 281 GLY CA HA2 sing N N 282 GLY CA HA3 sing N N 283 GLY C O doub N N 284 GLY C OXT sing N N 285 GLY OXT HXT sing N N 286 HIS N CA sing N N 287 HIS N H sing N N 288 HIS N H2 sing N N 289 HIS CA C sing N N 290 HIS CA CB sing N N 291 HIS CA HA sing N N 292 HIS C O doub N N 293 HIS C OXT sing N N 294 HIS CB CG sing N N 295 HIS CB HB2 sing N N 296 HIS CB HB3 sing N N 297 HIS CG ND1 sing Y N 298 HIS CG CD2 doub Y N 299 HIS ND1 CE1 doub Y N 300 HIS ND1 HD1 sing N N 301 HIS CD2 NE2 sing Y N 302 HIS CD2 HD2 sing N N 303 HIS CE1 NE2 sing Y N 304 HIS CE1 HE1 sing N N 305 HIS NE2 HE2 sing N N 306 HIS OXT HXT sing N N 307 HOH O H1 sing N N 308 HOH O H2 sing N N 309 ILE N CA sing N N 310 ILE N H sing N N 311 ILE N H2 sing N N 312 ILE CA C sing N N 313 ILE CA CB sing N N 314 ILE CA HA sing N N 315 ILE C O doub N N 316 ILE C OXT sing N N 317 ILE CB CG1 sing N N 318 ILE CB CG2 sing N N 319 ILE CB HB sing N N 320 ILE CG1 CD1 sing N N 321 ILE CG1 HG12 sing N N 322 ILE CG1 HG13 sing N N 323 ILE CG2 HG21 sing N N 324 ILE CG2 HG22 sing N N 325 ILE CG2 HG23 sing N N 326 ILE CD1 HD11 sing N N 327 ILE CD1 HD12 sing N N 328 ILE CD1 HD13 sing N N 329 ILE OXT HXT sing N N 330 LEU N CA sing N N 331 LEU N H sing N N 332 LEU N H2 sing N N 333 LEU CA C sing N N 334 LEU CA CB sing N N 335 LEU CA HA sing N N 336 LEU C O doub N N 337 LEU C OXT sing N N 338 LEU CB CG sing N N 339 LEU CB HB2 sing N N 340 LEU CB HB3 sing N N 341 LEU CG CD1 sing N N 342 LEU CG CD2 sing N N 343 LEU CG HG sing N N 344 LEU CD1 HD11 sing N N 345 LEU CD1 HD12 sing N N 346 LEU CD1 HD13 sing N N 347 LEU CD2 HD21 sing N N 348 LEU CD2 HD22 sing N N 349 LEU CD2 HD23 sing N N 350 LEU OXT HXT sing N N 351 LYS N CA sing N N 352 LYS N H sing N N 353 LYS N H2 sing N N 354 LYS CA C sing N N 355 LYS CA CB sing N N 356 LYS CA HA sing N N 357 LYS C O doub N N 358 LYS C OXT sing N N 359 LYS CB CG sing N N 360 LYS CB HB2 sing N N 361 LYS CB HB3 sing N N 362 LYS CG CD sing N N 363 LYS CG HG2 sing N N 364 LYS CG HG3 sing N N 365 LYS CD CE sing N N 366 LYS CD HD2 sing N N 367 LYS CD HD3 sing N N 368 LYS CE NZ sing N N 369 LYS CE HE2 sing N N 370 LYS CE HE3 sing N N 371 LYS NZ HZ1 sing N N 372 LYS NZ HZ2 sing N N 373 LYS NZ HZ3 sing N N 374 LYS OXT HXT sing N N 375 MET N CA sing N N 376 MET N H sing N N 377 MET N H2 sing N N 378 MET CA C sing N N 379 MET CA CB sing N N 380 MET CA HA sing N N 381 MET C O doub N N 382 MET C OXT sing N N 383 MET CB CG sing N N 384 MET CB HB2 sing N N 385 MET CB HB3 sing N N 386 MET CG SD sing N N 387 MET CG HG2 sing N N 388 MET CG HG3 sing N N 389 MET SD CE sing N N 390 MET CE HE1 sing N N 391 MET CE HE2 sing N N 392 MET CE HE3 sing N N 393 MET OXT HXT sing N N 394 PHE N CA sing N N 395 PHE N H sing N N 396 PHE N H2 sing N N 397 PHE CA C sing N N 398 PHE CA CB sing N N 399 PHE CA HA sing N N 400 PHE C O doub N N 401 PHE C OXT sing N N 402 PHE CB CG sing N N 403 PHE CB HB2 sing N N 404 PHE CB HB3 sing N N 405 PHE CG CD1 doub Y N 406 PHE CG CD2 sing Y N 407 PHE CD1 CE1 sing Y N 408 PHE CD1 HD1 sing N N 409 PHE CD2 CE2 doub Y N 410 PHE CD2 HD2 sing N N 411 PHE CE1 CZ doub Y N 412 PHE CE1 HE1 sing N N 413 PHE CE2 CZ sing Y N 414 PHE CE2 HE2 sing N N 415 PHE CZ HZ sing N N 416 PHE OXT HXT sing N N 417 PRO N CA sing N N 418 PRO N CD sing N N 419 PRO N H sing N N 420 PRO CA C sing N N 421 PRO CA CB sing N N 422 PRO CA HA sing N N 423 PRO C O doub N N 424 PRO C OXT sing N N 425 PRO CB CG sing N N 426 PRO CB HB2 sing N N 427 PRO CB HB3 sing N N 428 PRO CG CD sing N N 429 PRO CG HG2 sing N N 430 PRO CG HG3 sing N N 431 PRO CD HD2 sing N N 432 PRO CD HD3 sing N N 433 PRO OXT HXT sing N N 434 SER N CA sing N N 435 SER N H sing N N 436 SER N H2 sing N N 437 SER CA C sing N N 438 SER CA CB sing N N 439 SER CA HA sing N N 440 SER C O doub N N 441 SER C OXT sing N N 442 SER CB OG sing N N 443 SER CB HB2 sing N N 444 SER CB HB3 sing N N 445 SER OG HG sing N N 446 SER OXT HXT sing N N 447 SFG N CA sing N N 448 SFG N HN1 sing N N 449 SFG N HN2 sing N N 450 SFG CA C sing N N 451 SFG CA CB sing N N 452 SFG CA HA sing N N 453 SFG C O doub N N 454 SFG C OXT sing N N 455 SFG OXT HXT sing N N 456 SFG CB CG sing N N 457 SFG CB HB1 sing N N 458 SFG CB HB2 sing N N 459 SFG CG CD sing N N 460 SFG CG HG1 sing N N 461 SFG CG HG2 sing N N 462 SFG CD NE sing N N 463 SFG CD "C5'" sing N N 464 SFG CD HD sing N N 465 SFG NE HNE1 sing N N 466 SFG NE HNE2 sing N N 467 SFG "C5'" "C4'" sing N N 468 SFG "C5'" "H5'1" sing N N 469 SFG "C5'" "H5'2" sing N N 470 SFG "C4'" "O4'" sing N N 471 SFG "C4'" "C3'" sing N N 472 SFG "C4'" "H4'" sing N N 473 SFG "O4'" "C1'" sing N N 474 SFG "C3'" "O3'" sing N N 475 SFG "C3'" "C2'" sing N N 476 SFG "C3'" "H3'" sing N N 477 SFG "O3'" "HO3'" sing N N 478 SFG "C2'" "O2'" sing N N 479 SFG "C2'" "C1'" sing N N 480 SFG "C2'" "H2'" sing N N 481 SFG "O2'" "HO2'" sing N N 482 SFG "C1'" N9 sing N N 483 SFG "C1'" "H1'" sing N N 484 SFG N9 C8 sing Y N 485 SFG N9 C4 sing Y N 486 SFG C8 N7 doub Y N 487 SFG C8 H8 sing N N 488 SFG N7 C5 sing Y N 489 SFG C5 C6 sing Y N 490 SFG C5 C4 doub Y N 491 SFG C6 N6 sing N N 492 SFG C6 N1 doub Y N 493 SFG N6 HN61 sing N N 494 SFG N6 HN62 sing N N 495 SFG N1 C2 sing Y N 496 SFG C2 N3 doub Y N 497 SFG C2 H2 sing N N 498 SFG N3 C4 sing Y N 499 THR N CA sing N N 500 THR N H sing N N 501 THR N H2 sing N N 502 THR CA C sing N N 503 THR CA CB sing N N 504 THR CA HA sing N N 505 THR C O doub N N 506 THR C OXT sing N N 507 THR CB OG1 sing N N 508 THR CB CG2 sing N N 509 THR CB HB sing N N 510 THR OG1 HG1 sing N N 511 THR CG2 HG21 sing N N 512 THR CG2 HG22 sing N N 513 THR CG2 HG23 sing N N 514 THR OXT HXT sing N N 515 TRP N CA sing N N 516 TRP N H sing N N 517 TRP N H2 sing N N 518 TRP CA C sing N N 519 TRP CA CB sing N N 520 TRP CA HA sing N N 521 TRP C O doub N N 522 TRP C OXT sing N N 523 TRP CB CG sing N N 524 TRP CB HB2 sing N N 525 TRP CB HB3 sing N N 526 TRP CG CD1 doub Y N 527 TRP CG CD2 sing Y N 528 TRP CD1 NE1 sing Y N 529 TRP CD1 HD1 sing N N 530 TRP CD2 CE2 doub Y N 531 TRP CD2 CE3 sing Y N 532 TRP NE1 CE2 sing Y N 533 TRP NE1 HE1 sing N N 534 TRP CE2 CZ2 sing Y N 535 TRP CE3 CZ3 doub Y N 536 TRP CE3 HE3 sing N N 537 TRP CZ2 CH2 doub Y N 538 TRP CZ2 HZ2 sing N N 539 TRP CZ3 CH2 sing Y N 540 TRP CZ3 HZ3 sing N N 541 TRP CH2 HH2 sing N N 542 TRP OXT HXT sing N N 543 TYR N CA sing N N 544 TYR N H sing N N 545 TYR N H2 sing N N 546 TYR CA C sing N N 547 TYR CA CB sing N N 548 TYR CA HA sing N N 549 TYR C O doub N N 550 TYR C OXT sing N N 551 TYR CB CG sing N N 552 TYR CB HB2 sing N N 553 TYR CB HB3 sing N N 554 TYR CG CD1 doub Y N 555 TYR CG CD2 sing Y N 556 TYR CD1 CE1 sing Y N 557 TYR CD1 HD1 sing N N 558 TYR CD2 CE2 doub Y N 559 TYR CD2 HD2 sing N N 560 TYR CE1 CZ doub Y N 561 TYR CE1 HE1 sing N N 562 TYR CE2 CZ sing Y N 563 TYR CE2 HE2 sing N N 564 TYR CZ OH sing N N 565 TYR OH HH sing N N 566 TYR OXT HXT sing N N 567 VAL N CA sing N N 568 VAL N H sing N N 569 VAL N H2 sing N N 570 VAL CA C sing N N 571 VAL CA CB sing N N 572 VAL CA HA sing N N 573 VAL C O doub N N 574 VAL C OXT sing N N 575 VAL CB CG1 sing N N 576 VAL CB CG2 sing N N 577 VAL CB HB sing N N 578 VAL CG1 HG11 sing N N 579 VAL CG1 HG12 sing N N 580 VAL CG1 HG13 sing N N 581 VAL CG2 HG21 sing N N 582 VAL CG2 HG22 sing N N 583 VAL CG2 HG23 sing N N 584 VAL OXT HXT sing N N 585 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4RTJ 'double helix' 4RTJ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 2 1_555 C DG 11 1_555 0.217 -0.053 0.222 -18.322 -7.007 2.066 1 F_DC2:DG11_G F 2 ? G 11 ? 19 1 1 B DT 3 1_555 C DA 10 1_555 -0.095 -0.167 -0.364 6.432 6.284 8.421 2 F_DT3:DA10_G F 3 ? G 10 ? 20 1 1 B DA 4 1_555 C DT 9 1_555 0.089 -0.188 0.578 22.114 -17.697 3.933 3 F_DA4:DT9_G F 4 ? G 9 ? 20 1 1 B DG 5 1_555 C DC 8 1_555 -0.006 -0.275 0.351 10.473 -17.541 3.684 4 F_DG5:DC8_G F 5 ? G 8 ? 19 1 1 B DA 6 1_555 C DT 7 1_555 0.238 -0.082 -0.107 -0.701 -17.365 6.361 5 F_DA6:DT7_G F 6 ? G 7 ? 20 1 1 B DT 7 1_555 C DA 6 1_555 0.197 0.018 0.243 -3.720 -19.032 1.765 6 F_DT7:DA6_G F 7 ? G 6 ? 20 1 1 B DC 8 1_555 C DG 5 1_555 0.076 -0.070 0.778 -17.929 -18.899 4.551 7 F_DC8:DG5_G F 8 ? G 5 ? 19 1 1 B DT 9 1_555 C DA 4 1_555 0.165 -0.086 0.416 -18.754 -19.752 -2.159 8 F_DT9:DA4_G F 9 ? G 4 ? 20 1 1 B DA 10 1_555 C DT 3 1_555 -0.117 -0.106 -0.590 -16.787 -4.281 8.763 9 F_DA10:DT3_G F 10 ? G 3 ? 20 1 1 B DG 11 1_555 C DC 2 1_555 0.481 -0.344 0.022 14.730 -2.090 -4.974 10 F_DG11:DC2_G F 11 ? G 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 2 1_555 C DG 11 1_555 B DT 3 1_555 C DA 10 1_555 0.638 0.450 2.854 6.947 2.956 31.434 0.336 -0.038 2.952 5.361 -12.595 32.305 1 FF_DC2DT3:DA10DG11_GG F 2 ? G 11 ? F 3 ? G 10 ? 1 B DT 3 1_555 C DA 10 1_555 B DA 4 1_555 C DT 9 1_555 -1.402 1.509 3.101 -4.986 3.454 34.990 1.970 1.571 3.391 5.692 8.217 35.496 2 FF_DT3DA4:DT9DA10_GG F 3 ? G 10 ? F 4 ? G 9 ? 1 B DA 4 1_555 C DT 9 1_555 B DG 5 1_555 C DC 8 1_555 0.113 -0.369 3.545 -0.670 9.011 34.092 -2.043 -0.294 3.339 15.045 1.119 35.235 3 FF_DA4DG5:DC8DT9_GG F 4 ? G 9 ? F 5 ? G 8 ? 1 B DG 5 1_555 C DC 8 1_555 B DA 6 1_555 C DT 7 1_555 -0.042 -0.399 3.504 3.871 2.419 37.076 -0.964 0.610 3.450 3.787 -6.059 37.346 4 FF_DG5DA6:DT7DC8_GG F 5 ? G 8 ? F 6 ? G 7 ? 1 B DA 6 1_555 C DT 7 1_555 B DT 7 1_555 C DA 6 1_555 -0.023 -0.925 3.308 -2.394 -0.479 34.105 -1.496 -0.343 3.314 -0.816 4.075 34.190 5 FF_DA6DT7:DA6DT7_GG F 6 ? G 7 ? F 7 ? G 6 ? 1 B DT 7 1_555 C DA 6 1_555 B DC 8 1_555 C DG 5 1_555 -0.160 -0.608 3.496 -2.601 2.652 36.240 -1.365 -0.129 3.447 4.249 4.168 36.423 6 FF_DT7DC8:DG5DA6_GG F 7 ? G 6 ? F 8 ? G 5 ? 1 B DC 8 1_555 C DG 5 1_555 B DT 9 1_555 C DA 4 1_555 -0.559 -0.163 3.281 3.892 10.537 31.826 -1.974 1.590 2.991 18.509 -6.837 33.701 7 FF_DC8DT9:DA4DG5_GG F 8 ? G 5 ? F 9 ? G 4 ? 1 B DT 9 1_555 C DA 4 1_555 B DA 10 1_555 C DT 3 1_555 1.332 1.532 3.358 6.999 -3.047 38.127 2.691 -1.112 3.413 -4.607 -10.585 38.855 8 FF_DT9DA10:DT3DA4_GG F 9 ? G 4 ? F 10 ? G 3 ? 1 B DA 10 1_555 C DT 3 1_555 B DG 11 1_555 C DC 2 1_555 -0.631 0.418 2.759 -3.158 2.062 27.933 0.446 0.662 2.835 4.248 6.504 28.181 9 FF_DA10DG11:DC2DT3_GG F 10 ? G 3 ? F 11 ? G 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 SINEFUNGIN SFG 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2G1P _pdbx_initial_refinement_model.details 'PDB ENTRY 2G1P' #