HEADER TRANSPORT PROTEIN 24-NOV-14 4RV5 TITLE THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN FROM ANABAENA TITLE 2 VARIABILIS ATCC 29413 IN COMPLEX WITH PYRUVIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINO ACID/AMIDE ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN, COMPND 3 HAAT FAMILY; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANABAENA VARIABILIS ATCC 29413; SOURCE 3 ORGANISM_TAXID: 240292; SOURCE 4 STRAIN: ATCC 29413; SOURCE 5 GENE: AVA_0465; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG73 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,H.LI,R.JEDRZEJCZAK,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 4 15-NOV-23 4RV5 1 REMARK SEQADV LINK ATOM REVDAT 3 22-NOV-17 4RV5 1 REMARK REVDAT 2 28-JAN-15 4RV5 1 JRNL TITLE REVDAT 1 10-DEC-14 4RV5 0 JRNL AUTH K.TAN,H.LI,R.JEDRZEJCZAK,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A SOLUTE-BINDING PROTEIN FROM JRNL TITL 2 ANABAENA VARIABILIS ATCC 29413 IN COMPLEX WITH PYRUVIC ACID JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 323945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.113 REMARK 3 R VALUE (WORKING SET) : 0.112 REMARK 3 FREE R VALUE : 0.131 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 16176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 18.7327 - 3.2265 0.94 10999 567 0.1202 0.1398 REMARK 3 2 3.2265 - 2.5631 1.00 11378 615 0.1171 0.1457 REMARK 3 3 2.5631 - 2.2397 1.00 11368 556 0.1092 0.1227 REMARK 3 4 2.2397 - 2.0352 1.00 11284 627 0.1065 0.1279 REMARK 3 5 2.0352 - 1.8895 1.00 11238 601 0.1088 0.1218 REMARK 3 6 1.8895 - 1.7782 1.00 11260 589 0.1085 0.1187 REMARK 3 7 1.7782 - 1.6892 1.00 11250 558 0.1065 0.1241 REMARK 3 8 1.6892 - 1.6157 1.00 11227 550 0.1001 0.1139 REMARK 3 9 1.6157 - 1.5535 1.00 11193 576 0.0970 0.1143 REMARK 3 10 1.5535 - 1.4999 0.99 11049 655 0.0939 0.1133 REMARK 3 11 1.4999 - 1.4530 0.99 11112 630 0.0943 0.1085 REMARK 3 12 1.4530 - 1.4115 0.99 11097 554 0.0979 0.1188 REMARK 3 13 1.4115 - 1.3744 0.99 11091 573 0.1015 0.1207 REMARK 3 14 1.3744 - 1.3409 0.99 11096 571 0.1042 0.1231 REMARK 3 15 1.3409 - 1.3104 0.98 10985 577 0.1064 0.1196 REMARK 3 16 1.3104 - 1.2825 0.98 10970 619 0.1068 0.1339 REMARK 3 17 1.2825 - 1.2569 0.98 10964 553 0.1094 0.1245 REMARK 3 18 1.2569 - 1.2331 0.98 10952 578 0.1096 0.1298 REMARK 3 19 1.2331 - 1.2111 0.97 10851 613 0.1098 0.1250 REMARK 3 20 1.2111 - 1.1906 0.97 10844 545 0.1143 0.1295 REMARK 3 21 1.1906 - 1.1714 0.95 10623 550 0.1159 0.1259 REMARK 3 22 1.1714 - 1.1534 0.93 10374 543 0.1178 0.1332 REMARK 3 23 1.1534 - 1.1364 0.91 10168 543 0.1223 0.1356 REMARK 3 24 1.1364 - 1.1204 0.89 9905 496 0.1290 0.1528 REMARK 3 25 1.1204 - 1.1053 0.86 9576 502 0.1417 0.1505 REMARK 3 26 1.1053 - 1.0909 0.82 9164 485 0.1403 0.1494 REMARK 3 27 1.0909 - 1.0773 0.76 8490 463 0.1456 0.1658 REMARK 3 28 1.0773 - 1.0643 0.67 7452 374 0.1563 0.1717 REMARK 3 29 1.0643 - 1.0519 0.53 5911 302 0.1747 0.2005 REMARK 3 30 1.0519 - 1.0401 0.35 3898 211 0.2061 0.2359 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.060 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 11.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5761 REMARK 3 ANGLE : 1.232 7845 REMARK 3 CHIRALITY : 0.073 912 REMARK 3 PLANARITY : 0.007 1049 REMARK 3 DIHEDRAL : 13.791 2135 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RV5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000087834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO BUILDER/HKL3000, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK BUILDER/HKL3000, HKL REMARK 200 -3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 344461 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.040 REMARK 200 RESOLUTION RANGE LOW (A) : 18.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.56900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD BUILDER/HKL3000, MLPHARE BUILDER/HKL3000, DM REMARK 200 BUILDER/HKL3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MACL2, 0.1M BIS-TRIS:HCL, 25% REMARK 280 (W/V) PEG3350, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.30100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.30100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.26250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.29400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.26250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.29400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 75.30100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.26250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.29400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 75.30100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.26250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.29400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 941 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1045 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1069 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 ASN A 23 REMARK 465 ALA A 24 REMARK 465 THR A 25 REMARK 465 ASN A 26 REMARK 465 THR A 27 REMARK 465 ASP A 28 REMARK 465 THR A 29 REMARK 465 ASN A 30 REMARK 465 SER A 31 REMARK 465 THR A 32 REMARK 465 ASN A 33 REMARK 465 ASN A 34 REMARK 465 SER A 35 REMARK 465 PRO A 36 REMARK 465 ASN A 37 REMARK 465 ASN A 38 REMARK 465 THR A 39 REMARK 465 THR A 40 REMARK 465 ASN A 41 REMARK 465 THR A 42 REMARK 465 THR A 43 REMARK 465 THR A 44 REMARK 465 ASN A 45 REMARK 465 VAL A 46 REMARK 465 THR A 47 REMARK 465 THR A 48 REMARK 465 THR A 49 REMARK 465 SER A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 52 REMARK 465 SER B 22 REMARK 465 ASN B 23 REMARK 465 ALA B 24 REMARK 465 THR B 25 REMARK 465 ASN B 26 REMARK 465 THR B 27 REMARK 465 ASP B 28 REMARK 465 THR B 29 REMARK 465 ASN B 30 REMARK 465 SER B 31 REMARK 465 THR B 32 REMARK 465 ASN B 33 REMARK 465 ASN B 34 REMARK 465 SER B 35 REMARK 465 PRO B 36 REMARK 465 ASN B 37 REMARK 465 ASN B 38 REMARK 465 THR B 39 REMARK 465 THR B 40 REMARK 465 ASN B 41 REMARK 465 THR B 42 REMARK 465 THR B 43 REMARK 465 THR B 44 REMARK 465 ASN B 45 REMARK 465 VAL B 46 REMARK 465 THR B 47 REMARK 465 THR B 48 REMARK 465 THR B 49 REMARK 465 SER B 50 REMARK 465 ASP B 51 REMARK 465 LYS B 52 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 88 NZ REMARK 470 LYS A 192 CE NZ REMARK 470 LYS A 394 NZ REMARK 470 LYS A 405 CG CD CE NZ REMARK 470 LYS A 411 NZ REMARK 470 LYS A 416 CG CD CE NZ REMARK 470 LYS B 79 NZ REMARK 470 LYS B 120 NZ REMARK 470 LYS B 247 CE NZ REMARK 470 GLU B 307 CD OE1 OE2 REMARK 470 LYS B 314 CE NZ REMARK 470 LYS B 354 CD CE NZ REMARK 470 LYS B 369 CE NZ REMARK 470 LYS B 394 NZ REMARK 470 LYS B 402 NZ REMARK 470 LYS B 405 CD CE NZ REMARK 470 LYS B 411 NZ REMARK 470 LYS B 416 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 65 172.53 79.26 REMARK 500 ALA A 104 -153.38 54.34 REMARK 500 SER A 153 35.03 -166.68 REMARK 500 LEU A 256 -162.61 -102.60 REMARK 500 LYS A 292 -132.92 49.21 REMARK 500 ASN A 353 91.05 -163.47 REMARK 500 SER B 65 172.87 80.58 REMARK 500 ALA B 104 -153.76 54.37 REMARK 500 SER B 153 35.68 -167.49 REMARK 500 VAL B 290 -62.57 -95.25 REMARK 500 LYS B 292 -141.09 54.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 160 O REMARK 620 2 GLY A 163 O 84.8 REMARK 620 3 VAL A 166 O 101.5 105.4 REMARK 620 4 ILE A 388 O 91.1 152.8 101.8 REMARK 620 5 HOH A 660 O 172.1 95.1 86.1 85.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO B 160 O REMARK 620 2 GLY B 163 O 84.8 REMARK 620 3 VAL B 166 O 102.1 104.9 REMARK 620 4 ILE B 388 O 90.7 147.4 107.6 REMARK 620 5 HOH B 629 O 173.4 93.3 84.5 87.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NQR RELATED DB: PDB REMARK 900 N280D MUTANT IN COMPLEX WITH ALANINE REMARK 900 RELATED ID: 4NV3 RELATED DB: PDB REMARK 900 N280D MUTANT IN COMPLEX WITH VALINE REMARK 900 RELATED ID: 4OAT RELATED DB: PDB REMARK 900 N280D MUTANT IN COMPLEX WITH ISOLEUCINE REMARK 900 RELATED ID: 4OBB RELATED DB: PDB REMARK 900 IN COMPLEX WITH (3S)-3-METHYL-2-OXOPENTANOIC ACID REMARK 900 RELATED ID: 4OG2 RELATED DB: PDB REMARK 900 N280D MUTANT IN COMPLEX WITH LEUCINE REMARK 900 RELATED ID: 4OTZ RELATED DB: PDB REMARK 900 N280D MUTANT IN COMPLEX WITH CYSTEIN REMARK 900 RELATED ID: 4QYM RELATED DB: PDB REMARK 900 N280D MUTANT IN COMPLEX WITH METHIONINE REMARK 900 RELATED ID: 4RDC RELATED DB: PDB REMARK 900 N280D MUTANT IN COMPLEX WITH PROLINE REMARK 900 RELATED ID: MCSG-APC110063 RELATED DB: TARGETTRACK DBREF 4RV5 A 25 416 UNP Q3MFZ5 Q3MFZ5_ANAVT 25 416 DBREF 4RV5 B 25 416 UNP Q3MFZ5 Q3MFZ5_ANAVT 25 416 SEQADV 4RV5 SER A 22 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4RV5 ASN A 23 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4RV5 ALA A 24 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4RV5 SER B 22 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4RV5 ASN B 23 UNP Q3MFZ5 EXPRESSION TAG SEQADV 4RV5 ALA B 24 UNP Q3MFZ5 EXPRESSION TAG SEQRES 1 A 395 SER ASN ALA THR ASN THR ASP THR ASN SER THR ASN ASN SEQRES 2 A 395 SER PRO ASN ASN THR THR ASN THR THR THR ASN VAL THR SEQRES 3 A 395 THR THR SER ASP LYS ASN THR ILE PRO ILE GLY ILE ALA SEQRES 4 A 395 LEU ALA GLN THR SER ASN VAL ALA LEU LEU GLY GLN GLU SEQRES 5 A 395 GLN VAL ALA GLY ALA LYS ILE ALA GLU LYS TYR PHE ASN SEQRES 6 A 395 ASP LYS GLY GLY VAL ASN GLY THR PRO ILE LYS LEU ILE SEQRES 7 A 395 PHE GLN ASP THR ALA GLY ASP GLU ALA GLY THR ILE ASN SEQRES 8 A 395 ALA PHE GLN THR LEU ILE ASN LYS ASP LYS VAL VAL GLY SEQRES 9 A 395 ILE VAL GLY PRO THR LEU SER GLN GLN ALA PHE SER ALA SEQRES 10 A 395 ASN PRO ILE ALA GLU ARG ALA LYS VAL PRO VAL VAL GLY SEQRES 11 A 395 PRO SER ASN THR ALA LYS GLY ILE PRO GLU ILE GLY ASP SEQRES 12 A 395 TYR VAL ALA ARG VAL SER ALA PRO VAL SER VAL VAL ALA SEQRES 13 A 395 PRO ASN SER VAL LYS ALA ALA LEU LYS GLN ASN PRO ASN SEQRES 14 A 395 ILE LYS LYS VAL ALA VAL PHE PHE ALA GLN ASN ASP ALA SEQRES 15 A 395 PHE SER LYS SER GLU THR GLU ILE PHE GLN GLN THR VAL SEQRES 16 A 395 LYS ASP GLN GLY LEU GLU LEU VAL THR VAL GLN LYS PHE SEQRES 17 A 395 GLN THR THR ASP THR ASP PHE GLN SER GLN ALA THR ASN SEQRES 18 A 395 ALA ILE ASN LEU LYS PRO ASP LEU VAL ILE ILE SER GLY SEQRES 19 A 395 LEU ALA ALA ASP GLY GLY ASN LEU VAL ARG GLN LEU ARG SEQRES 20 A 395 GLU LEU GLY TYR GLN GLY ALA ILE ILE GLY GLY ASN GLY SEQRES 21 A 395 LEU ASN THR SER ASN VAL PHE ALA VAL CYS LYS ALA LEU SEQRES 22 A 395 CYS ASP GLY VAL LEU ILE ALA GLN ALA TYR SER PRO GLU SEQRES 23 A 395 TYR THR GLY GLU ILE ASN LYS ALA PHE ARG GLN ALA TYR SEQRES 24 A 395 VAL ASP GLN TYR LYS LYS GLU PRO PRO GLN PHE SER ALA SEQRES 25 A 395 GLN ALA PHE ALA ALA VAL GLN VAL TYR VAL GLU SER LEU SEQRES 26 A 395 LYS ALA LEU ASP THR LYS ASN LYS VAL SER LYS ILE GLN SEQRES 27 A 395 LEU PRO GLU LEU ARG THR GLU LEU ASN LYS GLN LEU LEU SEQRES 28 A 395 THR GLY LYS TYR ASN THR PRO LEU GLY GLU ILE SER PHE SEQRES 29 A 395 THR PRO ILE GLY GLU VAL VAL GLN LYS ASP PHE TYR VAL SEQRES 30 A 395 ALA GLN ILE LYS MSE GLU LYS ASP GLY SER GLN GLY LYS SEQRES 31 A 395 PHE THR PHE LEU LYS SEQRES 1 B 395 SER ASN ALA THR ASN THR ASP THR ASN SER THR ASN ASN SEQRES 2 B 395 SER PRO ASN ASN THR THR ASN THR THR THR ASN VAL THR SEQRES 3 B 395 THR THR SER ASP LYS ASN THR ILE PRO ILE GLY ILE ALA SEQRES 4 B 395 LEU ALA GLN THR SER ASN VAL ALA LEU LEU GLY GLN GLU SEQRES 5 B 395 GLN VAL ALA GLY ALA LYS ILE ALA GLU LYS TYR PHE ASN SEQRES 6 B 395 ASP LYS GLY GLY VAL ASN GLY THR PRO ILE LYS LEU ILE SEQRES 7 B 395 PHE GLN ASP THR ALA GLY ASP GLU ALA GLY THR ILE ASN SEQRES 8 B 395 ALA PHE GLN THR LEU ILE ASN LYS ASP LYS VAL VAL GLY SEQRES 9 B 395 ILE VAL GLY PRO THR LEU SER GLN GLN ALA PHE SER ALA SEQRES 10 B 395 ASN PRO ILE ALA GLU ARG ALA LYS VAL PRO VAL VAL GLY SEQRES 11 B 395 PRO SER ASN THR ALA LYS GLY ILE PRO GLU ILE GLY ASP SEQRES 12 B 395 TYR VAL ALA ARG VAL SER ALA PRO VAL SER VAL VAL ALA SEQRES 13 B 395 PRO ASN SER VAL LYS ALA ALA LEU LYS GLN ASN PRO ASN SEQRES 14 B 395 ILE LYS LYS VAL ALA VAL PHE PHE ALA GLN ASN ASP ALA SEQRES 15 B 395 PHE SER LYS SER GLU THR GLU ILE PHE GLN GLN THR VAL SEQRES 16 B 395 LYS ASP GLN GLY LEU GLU LEU VAL THR VAL GLN LYS PHE SEQRES 17 B 395 GLN THR THR ASP THR ASP PHE GLN SER GLN ALA THR ASN SEQRES 18 B 395 ALA ILE ASN LEU LYS PRO ASP LEU VAL ILE ILE SER GLY SEQRES 19 B 395 LEU ALA ALA ASP GLY GLY ASN LEU VAL ARG GLN LEU ARG SEQRES 20 B 395 GLU LEU GLY TYR GLN GLY ALA ILE ILE GLY GLY ASN GLY SEQRES 21 B 395 LEU ASN THR SER ASN VAL PHE ALA VAL CYS LYS ALA LEU SEQRES 22 B 395 CYS ASP GLY VAL LEU ILE ALA GLN ALA TYR SER PRO GLU SEQRES 23 B 395 TYR THR GLY GLU ILE ASN LYS ALA PHE ARG GLN ALA TYR SEQRES 24 B 395 VAL ASP GLN TYR LYS LYS GLU PRO PRO GLN PHE SER ALA SEQRES 25 B 395 GLN ALA PHE ALA ALA VAL GLN VAL TYR VAL GLU SER LEU SEQRES 26 B 395 LYS ALA LEU ASP THR LYS ASN LYS VAL SER LYS ILE GLN SEQRES 27 B 395 LEU PRO GLU LEU ARG THR GLU LEU ASN LYS GLN LEU LEU SEQRES 28 B 395 THR GLY LYS TYR ASN THR PRO LEU GLY GLU ILE SER PHE SEQRES 29 B 395 THR PRO ILE GLY GLU VAL VAL GLN LYS ASP PHE TYR VAL SEQRES 30 B 395 ALA GLN ILE LYS MSE GLU LYS ASP GLY SER GLN GLY LYS SEQRES 31 B 395 PHE THR PHE LEU LYS MODRES 4RV5 MSE A 403 MET SELENOMETHIONINE MODRES 4RV5 MSE B 403 MET SELENOMETHIONINE HET MSE A 403 18 HET MSE B 403 17 HET PYR A 501 9 HET MG A 502 1 HET FMT A 503 10 HET PYR B 501 9 HET MG B 502 1 HETNAM MSE SELENOMETHIONINE HETNAM PYR PYRUVIC ACID HETNAM MG MAGNESIUM ION HETNAM FMT FORMIC ACID FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 PYR 2(C3 H4 O3) FORMUL 4 MG 2(MG 2+) FORMUL 5 FMT C H2 O2 FORMUL 8 HOH *1005(H2 O) HELIX 1 1 VAL A 67 LYS A 88 1 22 HELIX 2 2 ASP A 106 LYS A 120 1 15 HELIX 3 3 LEU A 131 LYS A 146 1 16 HELIX 4 4 ILE A 159 GLY A 163 5 5 HELIX 5 5 PRO A 172 ALA A 177 1 6 HELIX 6 6 ALA A 177 ASN A 188 1 12 HELIX 7 7 ASP A 202 GLN A 219 1 18 HELIX 8 8 PHE A 236 ASN A 245 1 10 HELIX 9 9 LEU A 256 LEU A 270 1 15 HELIX 10 10 ASN A 280 ASN A 283 5 4 HELIX 11 11 THR A 284 ASN A 286 5 3 HELIX 12 12 VAL A 287 LYS A 292 1 6 HELIX 13 13 ALA A 293 ASP A 296 5 4 HELIX 14 14 GLY A 310 LYS A 325 1 16 HELIX 15 15 PRO A 329 ASN A 353 1 25 HELIX 16 16 LYS A 354 ILE A 358 5 5 HELIX 17 17 GLN A 359 GLY A 374 1 16 HELIX 18 18 VAL B 67 LYS B 88 1 22 HELIX 19 19 ASP B 106 LYS B 120 1 15 HELIX 20 20 LEU B 131 LYS B 146 1 16 HELIX 21 21 ILE B 159 GLY B 163 5 5 HELIX 22 22 PRO B 172 ASN B 188 1 17 HELIX 23 23 ASP B 202 GLN B 219 1 18 HELIX 24 24 PHE B 236 ASN B 245 1 10 HELIX 25 25 LEU B 256 LEU B 270 1 15 HELIX 26 26 ASN B 280 ASN B 283 5 4 HELIX 27 27 THR B 284 ASN B 286 5 3 HELIX 28 28 VAL B 287 LYS B 292 1 6 HELIX 29 29 ALA B 293 ASP B 296 5 4 HELIX 30 30 GLY B 310 LYS B 325 1 16 HELIX 31 31 PRO B 329 ASN B 353 1 25 HELIX 32 32 LYS B 354 ILE B 358 5 5 HELIX 33 33 GLN B 359 GLY B 374 1 16 SHEET 1 A 5 ILE A 96 PHE A 100 0 SHEET 2 A 5 ILE A 55 ILE A 59 1 N ILE A 59 O ILE A 99 SHEET 3 A 5 ILE A 126 VAL A 127 1 O VAL A 127 N GLY A 58 SHEET 4 A 5 VAL A 149 GLY A 151 1 O VAL A 150 N ILE A 126 SHEET 5 A 5 VAL A 166 ARG A 168 1 O ALA A 167 N GLY A 151 SHEET 1 B 4 GLU A 222 PHE A 229 0 SHEET 2 B 4 LYS A 193 ALA A 199 1 N VAL A 196 O GLN A 227 SHEET 3 B 4 LEU A 250 SER A 254 1 O ILE A 252 N PHE A 197 SHEET 4 B 4 ALA A 275 GLY A 278 1 O ILE A 277 N VAL A 251 SHEET 1 C 3 LEU A 299 GLN A 302 0 SHEET 2 C 3 TYR A 397 MSE A 403 -1 O TYR A 397 N GLN A 302 SHEET 3 C 3 GLY A 410 PHE A 414 -1 O LYS A 411 N LYS A 402 SHEET 1 D 3 LYS A 375 THR A 378 0 SHEET 2 D 3 GLY A 381 PHE A 385 -1 O ILE A 383 N TYR A 376 SHEET 3 D 3 VAL A 391 VAL A 392 -1 O VAL A 392 N SER A 384 SHEET 1 E 5 ILE B 96 PHE B 100 0 SHEET 2 E 5 ILE B 55 ILE B 59 1 N ILE B 59 O ILE B 99 SHEET 3 E 5 ILE B 126 VAL B 127 1 O VAL B 127 N GLY B 58 SHEET 4 E 5 VAL B 149 GLY B 151 1 O VAL B 150 N ILE B 126 SHEET 5 E 5 VAL B 166 ARG B 168 1 O ALA B 167 N GLY B 151 SHEET 1 F 4 GLU B 222 PHE B 229 0 SHEET 2 F 4 LYS B 193 ALA B 199 1 N VAL B 196 O GLN B 227 SHEET 3 F 4 LEU B 250 SER B 254 1 O ILE B 252 N PHE B 197 SHEET 4 F 4 ALA B 275 GLY B 278 1 O ILE B 277 N VAL B 251 SHEET 1 G 3 LEU B 299 GLN B 302 0 SHEET 2 G 3 TYR B 397 MSE B 403 -1 O TYR B 397 N GLN B 302 SHEET 3 G 3 GLY B 410 PHE B 414 -1 O LYS B 411 N LYS B 402 SHEET 1 H 3 LYS B 375 THR B 378 0 SHEET 2 H 3 GLY B 381 PHE B 385 -1 O ILE B 383 N TYR B 376 SHEET 3 H 3 VAL B 391 VAL B 392 -1 O VAL B 392 N SER B 384 SSBOND 1 CYS A 291 CYS A 295 1555 1555 2.05 SSBOND 2 CYS B 291 CYS B 295 1555 1555 2.06 LINK C ALYS A 402 N MSE A 403 1555 1555 1.33 LINK C BLYS A 402 N MSE A 403 1555 1555 1.33 LINK C MSE A 403 N AGLU A 404 1555 1555 1.33 LINK C MSE A 403 N BGLU A 404 1555 1555 1.33 LINK C LYS B 402 N MSE B 403 1555 1555 1.33 LINK C MSE B 403 N GLU B 404 1555 1555 1.33 LINK O PRO A 160 MG MG A 502 1555 1555 2.37 LINK O GLY A 163 MG MG A 502 1555 1555 2.29 LINK O VAL A 166 MG MG A 502 1555 1555 2.28 LINK O ILE A 388 MG MG A 502 1555 1555 2.28 LINK MG MG A 502 O HOH A 660 1555 1555 2.32 LINK O PRO B 160 MG MG B 502 1555 1555 2.39 LINK O GLY B 163 MG MG B 502 1555 1555 2.30 LINK O VAL B 166 MG MG B 502 1555 1555 2.27 LINK O ILE B 388 MG MG B 502 1555 1555 2.23 LINK MG MG B 502 O HOH B 629 1555 1555 2.37 CISPEP 1 GLY A 128 PRO A 129 0 -9.32 CISPEP 2 GLY B 128 PRO B 129 0 -7.63 SITE 1 AC1 8 LEU A 131 SER A 132 SER A 153 ASN A 154 SITE 2 AC1 8 THR A 155 PHE A 204 ASN A 280 HOH A 613 SITE 1 AC2 5 PRO A 160 GLY A 163 VAL A 166 ILE A 388 SITE 2 AC2 5 HOH A 660 SITE 1 AC3 9 ASN A 283 GLN A 302 PRO A 329 GLN A 330 SITE 2 AC3 9 PHE A 412 HOH A 689 HOH A 690 HOH A 744 SITE 3 AC3 9 HOH A 763 SITE 1 AC4 8 LEU B 131 SER B 132 SER B 153 ASN B 154 SITE 2 AC4 8 THR B 155 PHE B 204 ASN B 280 HOH B 624 SITE 1 AC5 5 PRO B 160 GLY B 163 VAL B 166 ILE B 388 SITE 2 AC5 5 HOH B 629 CRYST1 98.525 100.588 150.602 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010150 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006640 0.00000