data_4RVR # _entry.id 4RVR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4RVR pdb_00004rvr 10.2210/pdb4rvr/pdb RCSB RCSB087855 ? ? WWPDB D_1000087855 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4IR3 . unspecified PDB 4IR4 . unspecified PDB 4IR5 . unspecified PDB 4IR6 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4RVR _pdbx_database_status.recvd_initial_deposition_date 2014-11-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chaikuad, A.' 1 'Felletar, I.' 2 'Chung, C.W.' 3 'Drewry, D.' 4 'Chen, P.' 5 'Filippakopoulos, P.' 6 'Fedorov, O.' 7 'von Delft, F.' 8 'Arrowsmith, C.H.' 9 'Edwards, A.M.' 10 'Bountra, C.' 11 'Knapp, S.' 12 'Structural Genomics Consortium (SGC)' 13 # _citation.id primary _citation.title 'Discovery and Characterization of GSK2801, a Selective Chemical Probe for the Bromodomains BAZ2A and BAZ2B.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 59 _citation.page_first 1410 _citation.page_last 1424 _citation.year 2016 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25799074 _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.5b00209 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, P.' 1 ? primary 'Chaikuad, A.' 2 ? primary 'Bamborough, P.' 3 ? primary 'Bantscheff, M.' 4 ? primary 'Bountra, C.' 5 ? primary 'Chung, C.W.' 6 ? primary 'Fedorov, O.' 7 ? primary 'Grandi, P.' 8 ? primary 'Jung, D.' 9 ? primary 'Lesniak, R.' 10 ? primary 'Lindon, M.' 11 ? primary 'Muller, S.' 12 ? primary 'Philpott, M.' 13 ? primary 'Prinjha, R.' 14 ? primary 'Rogers, C.' 15 ? primary 'Selenski, C.' 16 ? primary 'Tallant, C.' 17 ? primary 'Werner, T.' 18 ? primary 'Willson, T.M.' 19 ? primary 'Knapp, S.' 20 ? primary 'Drewry, D.H.' 21 ? # _cell.entry_id 4RVR _cell.length_a 82.720 _cell.length_b 96.975 _cell.length_c 58.060 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4RVR _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain adjacent to zinc finger domain protein 2B' 13618.652 1 ? ? 'Bromo domain residues 2054-2168' ? 2 non-polymer syn '1-{1-[2-(methylsulfonyl)phenyl]-7-propoxyindolizin-3-yl}ethanone' 371.450 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 4 water nat water 18.015 176 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name hWALp4 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRL VFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKVS ; _entity_poly.pdbx_seq_one_letter_code_can ;SMSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRL VFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKVS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 SER n 1 4 VAL n 1 5 LYS n 1 6 LYS n 1 7 PRO n 1 8 LYS n 1 9 ARG n 1 10 ASP n 1 11 ASP n 1 12 SER n 1 13 LYS n 1 14 ASP n 1 15 LEU n 1 16 ALA n 1 17 LEU n 1 18 CYS n 1 19 SER n 1 20 MET n 1 21 ILE n 1 22 LEU n 1 23 THR n 1 24 GLU n 1 25 MET n 1 26 GLU n 1 27 THR n 1 28 HIS n 1 29 GLU n 1 30 ASP n 1 31 ALA n 1 32 TRP n 1 33 PRO n 1 34 PHE n 1 35 LEU n 1 36 LEU n 1 37 PRO n 1 38 VAL n 1 39 ASN n 1 40 LEU n 1 41 LYS n 1 42 LEU n 1 43 VAL n 1 44 PRO n 1 45 GLY n 1 46 TYR n 1 47 LYS n 1 48 LYS n 1 49 VAL n 1 50 ILE n 1 51 LYS n 1 52 LYS n 1 53 PRO n 1 54 MET n 1 55 ASP n 1 56 PHE n 1 57 SER n 1 58 THR n 1 59 ILE n 1 60 ARG n 1 61 GLU n 1 62 LYS n 1 63 LEU n 1 64 SER n 1 65 SER n 1 66 GLY n 1 67 GLN n 1 68 TYR n 1 69 PRO n 1 70 ASN n 1 71 LEU n 1 72 GLU n 1 73 THR n 1 74 PHE n 1 75 ALA n 1 76 LEU n 1 77 ASP n 1 78 VAL n 1 79 ARG n 1 80 LEU n 1 81 VAL n 1 82 PHE n 1 83 ASP n 1 84 ASN n 1 85 CYS n 1 86 GLU n 1 87 THR n 1 88 PHE n 1 89 ASN n 1 90 GLU n 1 91 ASP n 1 92 ASP n 1 93 SER n 1 94 ASP n 1 95 ILE n 1 96 GLY n 1 97 ARG n 1 98 ALA n 1 99 GLY n 1 100 HIS n 1 101 ASN n 1 102 MET n 1 103 ARG n 1 104 LYS n 1 105 TYR n 1 106 PHE n 1 107 GLU n 1 108 LYS n 1 109 LYS n 1 110 TRP n 1 111 THR n 1 112 ASP n 1 113 THR n 1 114 PHE n 1 115 LYS n 1 116 VAL n 1 117 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BAZ2B, KIAA1476' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-BSA4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BAZ2B_HUMAN _struct_ref.pdbx_db_accession Q9UIF8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVF DNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKVS ; _struct_ref.pdbx_align_begin 2054 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4RVR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 117 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UIF8 _struct_ref_seq.db_align_beg 2054 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1858 _struct_ref_seq.pdbx_auth_seq_align_end 1972 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4RVR SER A 1 ? UNP Q9UIF8 ? ? 'expression tag' 1856 1 1 4RVR MET A 2 ? UNP Q9UIF8 ? ? 'expression tag' 1857 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3WQ non-polymer . '1-{1-[2-(methylsulfonyl)phenyl]-7-propoxyindolizin-3-yl}ethanone' ? 'C20 H21 N O4 S' 371.450 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4RVR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.27 _exptl_crystal.density_percent_sol 71.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details ;28% Low Molecular-Weight PEG Smears, 0.1M MES pH 6.5 (Ligand soaking performed in low-molecular-weight PEG smears stabilizing solution) , VAPOR DIFFUSION, SITTING DROP, temperature 277.15K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2012-03-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Flat graphite crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4RVR _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 31.43 _reflns.d_resolution_high 1.98 _reflns.number_obs 16611 _reflns.number_all 16635 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.5 _reflns.B_iso_Wilson_estimate 39.7 _reflns.pdbx_redundancy 5.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.98 _reflns_shell.d_res_low 2.09 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.647 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2385 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4RVR _refine.ls_number_reflns_obs 15770 _refine.ls_number_reflns_all 16611 _refine.pdbx_ls_sigma_I 2.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.11 _refine.ls_d_res_high 1.98 _refine.ls_percent_reflns_obs 99.80 _refine.ls_R_factor_obs 0.18915 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18686 _refine.ls_R_factor_R_free 0.23196 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 841 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.B_iso_mean 44.683 _refine.aniso_B[1][1] 1.21 _refine.aniso_B[2][2] 0.08 _refine.aniso_B[3][3] -1.29 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 3G0L _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.125 _refine.pdbx_overall_ESU_R_Free 0.129 _refine.overall_SU_ML 0.085 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.344 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4RVR _refine_analyze.Luzzati_coordinate_error_obs 0.234 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 948 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 176 _refine_hist.number_atoms_total 1174 _refine_hist.d_res_high 1.98 _refine_hist.d_res_low 30.11 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.016 0.020 ? 1044 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1001 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.505 2.019 ? 1401 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.741 3.006 ? 2323 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.063 5.000 ? 124 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 32.634 24.667 ? 45 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.474 15.000 ? 192 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16.825 15.000 ? 5 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.083 0.200 ? 147 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.009 0.021 ? 1127 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 222 ? 'X-RAY DIFFRACTION' r_mcbond_it 6.122 5.808 ? 478 ? 'X-RAY DIFFRACTION' r_mcbond_other 6.051 5.791 ? 477 ? 'X-RAY DIFFRACTION' r_mcangle_it 7.972 10.779 ? 599 ? 'X-RAY DIFFRACTION' r_mcangle_other 7.967 10.814 ? 600 ? 'X-RAY DIFFRACTION' r_scbond_it 7.990 7.143 ? 566 ? 'X-RAY DIFFRACTION' r_scbond_other 7.985 7.142 ? 566 ? 'X-RAY DIFFRACTION' r_scangle_other 10.503 12.393 ? 800 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 12.494 35.696 ? 1387 ? 'X-RAY DIFFRACTION' r_long_range_B_other 12.491 35.741 ? 1388 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.980 _refine_ls_shell.d_res_low 2.031 _refine_ls_shell.number_reflns_R_work 1111 _refine_ls_shell.R_factor_R_work 0.380 _refine_ls_shell.percent_reflns_obs 97.92 _refine_ls_shell.R_factor_R_free 0.535 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4RVR _struct.title 'Crystal Structure of the bromodomain of human BAZ2B in complex WITH GSK2801' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4RVR _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'SGC, Structural Genomics Consortium, TRANSCRIPTION, acetylated lysine binding protein, KIAA1476, WALp4, chemical probe' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details 'THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 13 ? HIS A 28 ? LYS A 1868 HIS A 1883 1 ? 16 HELX_P HELX_P2 2 GLU A 29 ? LEU A 35 ? GLU A 1884 LEU A 1890 5 ? 7 HELX_P HELX_P3 3 GLY A 45 ? ILE A 50 ? GLY A 1900 ILE A 1905 1 ? 6 HELX_P HELX_P4 4 ASP A 55 ? SER A 65 ? ASP A 1910 SER A 1920 1 ? 11 HELX_P HELX_P5 5 ASN A 70 ? ASN A 89 ? ASN A 1925 ASN A 1944 1 ? 20 HELX_P HELX_P6 6 SER A 93 ? LYS A 115 ? SER A 1948 LYS A 1970 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 3WQ 2001 ? 11 'BINDING SITE FOR RESIDUE 3WQ A 2001' AC2 Software A EDO 2002 ? 2 'BINDING SITE FOR RESIDUE EDO A 2002' AC3 Software A EDO 2003 ? 4 'BINDING SITE FOR RESIDUE EDO A 2003' AC4 Software A EDO 2004 ? 1 'BINDING SITE FOR RESIDUE EDO A 2004' AC5 Software A EDO 2005 ? 4 'BINDING SITE FOR RESIDUE EDO A 2005' AC6 Software A EDO 2006 ? 6 'BINDING SITE FOR RESIDUE EDO A 2006' AC7 Software A EDO 2007 ? 1 'BINDING SITE FOR RESIDUE EDO A 2007' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 PRO A 33 ? PRO A 1888 . ? 1_555 ? 2 AC1 11 LEU A 36 ? LEU A 1891 . ? 1_555 ? 3 AC1 11 PRO A 37 ? PRO A 1892 . ? 1_555 ? 4 AC1 11 VAL A 38 ? VAL A 1893 . ? 1_555 ? 5 AC1 11 ASN A 39 ? ASN A 1894 . ? 1_555 ? 6 AC1 11 LEU A 42 ? LEU A 1897 . ? 1_555 ? 7 AC1 11 VAL A 43 ? VAL A 1898 . ? 1_555 ? 8 AC1 11 ASN A 89 ? ASN A 1944 . ? 1_555 ? 9 AC1 11 ILE A 95 ? ILE A 1950 . ? 1_555 ? 10 AC1 11 HOH I . ? HOH A 2170 . ? 1_555 ? 11 AC1 11 HOH I . ? HOH A 2204 . ? 1_555 ? 12 AC2 2 HIS A 28 ? HIS A 1883 . ? 1_555 ? 13 AC2 2 GLU A 29 ? GLU A 1884 . ? 1_555 ? 14 AC3 4 ARG A 9 ? ARG A 1864 . ? 1_555 ? 15 AC3 4 THR A 113 ? THR A 1968 . ? 1_555 ? 16 AC3 4 PHE A 114 ? PHE A 1969 . ? 1_555 ? 17 AC3 4 SER A 117 ? SER A 1972 . ? 1_555 ? 18 AC4 1 ARG A 9 ? ARG A 1864 . ? 1_555 ? 19 AC5 4 THR A 23 ? THR A 1878 . ? 1_555 ? 20 AC5 4 GLU A 26 ? GLU A 1881 . ? 1_555 ? 21 AC5 4 ARG A 60 ? ARG A 1915 . ? 1_555 ? 22 AC5 4 HOH I . ? HOH A 2228 . ? 1_555 ? 23 AC6 6 LEU A 40 ? LEU A 1895 . ? 1_555 ? 24 AC6 6 LYS A 41 ? LYS A 1896 . ? 1_555 ? 25 AC6 6 VAL A 43 ? VAL A 1898 . ? 1_555 ? 26 AC6 6 PRO A 44 ? PRO A 1899 . ? 1_555 ? 27 AC6 6 HOH I . ? HOH A 2102 . ? 1_555 ? 28 AC6 6 HOH I . ? HOH A 2268 . ? 1_555 ? 29 AC7 1 SER A 117 ? SER A 1972 . ? 1_555 ? # _database_PDB_matrix.entry_id 4RVR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4RVR _atom_sites.fract_transf_matrix[1][1] 0.012089 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010312 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017224 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1856 1856 SER SER A . n A 1 2 MET 2 1857 1857 MET MET A . n A 1 3 SER 3 1858 1858 SER SER A . n A 1 4 VAL 4 1859 1859 VAL VAL A . n A 1 5 LYS 5 1860 1860 LYS LYS A . n A 1 6 LYS 6 1861 1861 LYS LYS A . n A 1 7 PRO 7 1862 1862 PRO PRO A . n A 1 8 LYS 8 1863 1863 LYS LYS A . n A 1 9 ARG 9 1864 1864 ARG ARG A . n A 1 10 ASP 10 1865 1865 ASP ASP A . n A 1 11 ASP 11 1866 1866 ASP ASP A . n A 1 12 SER 12 1867 1867 SER SER A . n A 1 13 LYS 13 1868 1868 LYS LYS A . n A 1 14 ASP 14 1869 1869 ASP ASP A . n A 1 15 LEU 15 1870 1870 LEU LEU A . n A 1 16 ALA 16 1871 1871 ALA ALA A . n A 1 17 LEU 17 1872 1872 LEU LEU A . n A 1 18 CYS 18 1873 1873 CYS CYS A . n A 1 19 SER 19 1874 1874 SER SER A . n A 1 20 MET 20 1875 1875 MET MET A . n A 1 21 ILE 21 1876 1876 ILE ILE A . n A 1 22 LEU 22 1877 1877 LEU LEU A . n A 1 23 THR 23 1878 1878 THR THR A . n A 1 24 GLU 24 1879 1879 GLU GLU A . n A 1 25 MET 25 1880 1880 MET MET A . n A 1 26 GLU 26 1881 1881 GLU GLU A . n A 1 27 THR 27 1882 1882 THR THR A . n A 1 28 HIS 28 1883 1883 HIS HIS A . n A 1 29 GLU 29 1884 1884 GLU GLU A . n A 1 30 ASP 30 1885 1885 ASP ASP A . n A 1 31 ALA 31 1886 1886 ALA ALA A . n A 1 32 TRP 32 1887 1887 TRP TRP A . n A 1 33 PRO 33 1888 1888 PRO PRO A . n A 1 34 PHE 34 1889 1889 PHE PHE A . n A 1 35 LEU 35 1890 1890 LEU LEU A . n A 1 36 LEU 36 1891 1891 LEU LEU A . n A 1 37 PRO 37 1892 1892 PRO PRO A . n A 1 38 VAL 38 1893 1893 VAL VAL A . n A 1 39 ASN 39 1894 1894 ASN ASN A . n A 1 40 LEU 40 1895 1895 LEU LEU A . n A 1 41 LYS 41 1896 1896 LYS LYS A . n A 1 42 LEU 42 1897 1897 LEU LEU A . n A 1 43 VAL 43 1898 1898 VAL VAL A . n A 1 44 PRO 44 1899 1899 PRO PRO A . n A 1 45 GLY 45 1900 1900 GLY GLY A . n A 1 46 TYR 46 1901 1901 TYR TYR A . n A 1 47 LYS 47 1902 1902 LYS LYS A . n A 1 48 LYS 48 1903 1903 LYS LYS A . n A 1 49 VAL 49 1904 1904 VAL VAL A . n A 1 50 ILE 50 1905 1905 ILE ILE A . n A 1 51 LYS 51 1906 1906 LYS LYS A . n A 1 52 LYS 52 1907 1907 LYS LYS A . n A 1 53 PRO 53 1908 1908 PRO PRO A . n A 1 54 MET 54 1909 1909 MET MET A . n A 1 55 ASP 55 1910 1910 ASP ASP A . n A 1 56 PHE 56 1911 1911 PHE PHE A . n A 1 57 SER 57 1912 1912 SER SER A . n A 1 58 THR 58 1913 1913 THR THR A . n A 1 59 ILE 59 1914 1914 ILE ILE A . n A 1 60 ARG 60 1915 1915 ARG ARG A . n A 1 61 GLU 61 1916 1916 GLU GLU A . n A 1 62 LYS 62 1917 1917 LYS LYS A . n A 1 63 LEU 63 1918 1918 LEU LEU A . n A 1 64 SER 64 1919 1919 SER SER A . n A 1 65 SER 65 1920 1920 SER SER A . n A 1 66 GLY 66 1921 1921 GLY GLY A . n A 1 67 GLN 67 1922 1922 GLN GLN A . n A 1 68 TYR 68 1923 1923 TYR TYR A . n A 1 69 PRO 69 1924 1924 PRO PRO A . n A 1 70 ASN 70 1925 1925 ASN ASN A . n A 1 71 LEU 71 1926 1926 LEU LEU A . n A 1 72 GLU 72 1927 1927 GLU GLU A . n A 1 73 THR 73 1928 1928 THR THR A . n A 1 74 PHE 74 1929 1929 PHE PHE A . n A 1 75 ALA 75 1930 1930 ALA ALA A . n A 1 76 LEU 76 1931 1931 LEU LEU A . n A 1 77 ASP 77 1932 1932 ASP ASP A . n A 1 78 VAL 78 1933 1933 VAL VAL A . n A 1 79 ARG 79 1934 1934 ARG ARG A . n A 1 80 LEU 80 1935 1935 LEU LEU A . n A 1 81 VAL 81 1936 1936 VAL VAL A . n A 1 82 PHE 82 1937 1937 PHE PHE A . n A 1 83 ASP 83 1938 1938 ASP ASP A . n A 1 84 ASN 84 1939 1939 ASN ASN A . n A 1 85 CYS 85 1940 1940 CYS CYS A . n A 1 86 GLU 86 1941 1941 GLU GLU A . n A 1 87 THR 87 1942 1942 THR THR A . n A 1 88 PHE 88 1943 1943 PHE PHE A . n A 1 89 ASN 89 1944 1944 ASN ASN A . n A 1 90 GLU 90 1945 1945 GLU GLU A . n A 1 91 ASP 91 1946 1946 ASP ASP A . n A 1 92 ASP 92 1947 1947 ASP ASP A . n A 1 93 SER 93 1948 1948 SER SER A . n A 1 94 ASP 94 1949 1949 ASP ASP A . n A 1 95 ILE 95 1950 1950 ILE ILE A . n A 1 96 GLY 96 1951 1951 GLY GLY A . n A 1 97 ARG 97 1952 1952 ARG ARG A . n A 1 98 ALA 98 1953 1953 ALA ALA A . n A 1 99 GLY 99 1954 1954 GLY GLY A . n A 1 100 HIS 100 1955 1955 HIS HIS A . n A 1 101 ASN 101 1956 1956 ASN ASN A . n A 1 102 MET 102 1957 1957 MET MET A . n A 1 103 ARG 103 1958 1958 ARG ARG A . n A 1 104 LYS 104 1959 1959 LYS LYS A . n A 1 105 TYR 105 1960 1960 TYR TYR A . n A 1 106 PHE 106 1961 1961 PHE PHE A . n A 1 107 GLU 107 1962 1962 GLU GLU A . n A 1 108 LYS 108 1963 1963 LYS LYS A . n A 1 109 LYS 109 1964 1964 LYS LYS A . n A 1 110 TRP 110 1965 1965 TRP TRP A . n A 1 111 THR 111 1966 1966 THR THR A . n A 1 112 ASP 112 1967 1967 ASP ASP A . n A 1 113 THR 113 1968 1968 THR THR A . n A 1 114 PHE 114 1969 1969 PHE PHE A . n A 1 115 LYS 115 1970 1970 LYS LYS A . n A 1 116 VAL 116 1971 1971 VAL VAL A . n A 1 117 SER 117 1972 1972 SER SER A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 3WQ 1 2001 1 3WQ DRG A . C 3 EDO 1 2002 1 EDO EDO A . D 3 EDO 1 2003 2 EDO EDO A . E 3 EDO 1 2004 3 EDO EDO A . F 3 EDO 1 2005 4 EDO EDO A . G 3 EDO 1 2006 5 EDO EDO A . H 3 EDO 1 2007 6 EDO EDO A . I 4 HOH 1 2101 1 HOH HOH A . I 4 HOH 2 2102 2 HOH HOH A . I 4 HOH 3 2103 3 HOH HOH A . I 4 HOH 4 2104 4 HOH HOH A . I 4 HOH 5 2105 5 HOH HOH A . I 4 HOH 6 2106 6 HOH HOH A . I 4 HOH 7 2107 7 HOH HOH A . I 4 HOH 8 2108 8 HOH HOH A . I 4 HOH 9 2109 9 HOH HOH A . I 4 HOH 10 2110 10 HOH HOH A . I 4 HOH 11 2111 11 HOH HOH A . I 4 HOH 12 2112 12 HOH HOH A . I 4 HOH 13 2113 13 HOH HOH A . I 4 HOH 14 2114 14 HOH HOH A . I 4 HOH 15 2115 15 HOH HOH A . I 4 HOH 16 2116 16 HOH HOH A . I 4 HOH 17 2117 17 HOH HOH A . I 4 HOH 18 2118 18 HOH HOH A . I 4 HOH 19 2119 19 HOH HOH A . I 4 HOH 20 2120 20 HOH HOH A . I 4 HOH 21 2121 21 HOH HOH A . I 4 HOH 22 2122 22 HOH HOH A . I 4 HOH 23 2123 23 HOH HOH A . I 4 HOH 24 2124 24 HOH HOH A . I 4 HOH 25 2125 25 HOH HOH A . I 4 HOH 26 2126 26 HOH HOH A . I 4 HOH 27 2127 27 HOH HOH A . I 4 HOH 28 2128 28 HOH HOH A . I 4 HOH 29 2129 29 HOH HOH A . I 4 HOH 30 2130 30 HOH HOH A . I 4 HOH 31 2131 31 HOH HOH A . I 4 HOH 32 2132 32 HOH HOH A . I 4 HOH 33 2133 33 HOH HOH A . I 4 HOH 34 2134 34 HOH HOH A . I 4 HOH 35 2135 35 HOH HOH A . I 4 HOH 36 2136 36 HOH HOH A . I 4 HOH 37 2137 37 HOH HOH A . I 4 HOH 38 2138 38 HOH HOH A . I 4 HOH 39 2139 39 HOH HOH A . I 4 HOH 40 2140 40 HOH HOH A . I 4 HOH 41 2141 41 HOH HOH A . I 4 HOH 42 2142 42 HOH HOH A . I 4 HOH 43 2143 43 HOH HOH A . I 4 HOH 44 2144 44 HOH HOH A . I 4 HOH 45 2145 45 HOH HOH A . I 4 HOH 46 2146 46 HOH HOH A . I 4 HOH 47 2147 47 HOH HOH A . I 4 HOH 48 2148 48 HOH HOH A . I 4 HOH 49 2149 50 HOH HOH A . I 4 HOH 50 2150 51 HOH HOH A . I 4 HOH 51 2151 52 HOH HOH A . I 4 HOH 52 2152 54 HOH HOH A . I 4 HOH 53 2153 55 HOH HOH A . I 4 HOH 54 2154 59 HOH HOH A . I 4 HOH 55 2155 62 HOH HOH A . I 4 HOH 56 2156 63 HOH HOH A . I 4 HOH 57 2157 64 HOH HOH A . I 4 HOH 58 2158 66 HOH HOH A . I 4 HOH 59 2159 67 HOH HOH A . I 4 HOH 60 2160 70 HOH HOH A . I 4 HOH 61 2161 71 HOH HOH A . I 4 HOH 62 2162 72 HOH HOH A . I 4 HOH 63 2163 73 HOH HOH A . I 4 HOH 64 2164 74 HOH HOH A . I 4 HOH 65 2165 75 HOH HOH A . I 4 HOH 66 2166 76 HOH HOH A . I 4 HOH 67 2167 77 HOH HOH A . I 4 HOH 68 2168 78 HOH HOH A . I 4 HOH 69 2169 79 HOH HOH A . I 4 HOH 70 2170 80 HOH HOH A . I 4 HOH 71 2171 81 HOH HOH A . I 4 HOH 72 2172 82 HOH HOH A . I 4 HOH 73 2173 83 HOH HOH A . I 4 HOH 74 2174 84 HOH HOH A . I 4 HOH 75 2175 85 HOH HOH A . I 4 HOH 76 2176 86 HOH HOH A . I 4 HOH 77 2177 87 HOH HOH A . I 4 HOH 78 2178 88 HOH HOH A . I 4 HOH 79 2179 89 HOH HOH A . I 4 HOH 80 2180 90 HOH HOH A . I 4 HOH 81 2181 91 HOH HOH A . I 4 HOH 82 2182 92 HOH HOH A . I 4 HOH 83 2183 93 HOH HOH A . I 4 HOH 84 2184 94 HOH HOH A . I 4 HOH 85 2185 95 HOH HOH A . I 4 HOH 86 2186 96 HOH HOH A . I 4 HOH 87 2187 97 HOH HOH A . I 4 HOH 88 2188 98 HOH HOH A . I 4 HOH 89 2189 99 HOH HOH A . I 4 HOH 90 2190 100 HOH HOH A . I 4 HOH 91 2191 101 HOH HOH A . I 4 HOH 92 2192 102 HOH HOH A . I 4 HOH 93 2193 103 HOH HOH A . I 4 HOH 94 2194 105 HOH HOH A . I 4 HOH 95 2195 106 HOH HOH A . I 4 HOH 96 2196 107 HOH HOH A . I 4 HOH 97 2197 108 HOH HOH A . I 4 HOH 98 2198 109 HOH HOH A . I 4 HOH 99 2199 110 HOH HOH A . I 4 HOH 100 2200 111 HOH HOH A . I 4 HOH 101 2201 112 HOH HOH A . I 4 HOH 102 2202 113 HOH HOH A . I 4 HOH 103 2203 114 HOH HOH A . I 4 HOH 104 2204 115 HOH HOH A . I 4 HOH 105 2205 116 HOH HOH A . I 4 HOH 106 2206 117 HOH HOH A . I 4 HOH 107 2207 118 HOH HOH A . I 4 HOH 108 2208 119 HOH HOH A . I 4 HOH 109 2209 120 HOH HOH A . I 4 HOH 110 2210 121 HOH HOH A . I 4 HOH 111 2211 122 HOH HOH A . I 4 HOH 112 2212 123 HOH HOH A . I 4 HOH 113 2213 125 HOH HOH A . I 4 HOH 114 2214 126 HOH HOH A . I 4 HOH 115 2215 127 HOH HOH A . I 4 HOH 116 2216 128 HOH HOH A . I 4 HOH 117 2217 129 HOH HOH A . I 4 HOH 118 2218 130 HOH HOH A . I 4 HOH 119 2219 131 HOH HOH A . I 4 HOH 120 2220 132 HOH HOH A . I 4 HOH 121 2221 133 HOH HOH A . I 4 HOH 122 2222 134 HOH HOH A . I 4 HOH 123 2223 135 HOH HOH A . I 4 HOH 124 2224 136 HOH HOH A . I 4 HOH 125 2225 137 HOH HOH A . I 4 HOH 126 2226 138 HOH HOH A . I 4 HOH 127 2227 139 HOH HOH A . I 4 HOH 128 2228 140 HOH HOH A . I 4 HOH 129 2229 142 HOH HOH A . I 4 HOH 130 2230 143 HOH HOH A . I 4 HOH 131 2231 144 HOH HOH A . I 4 HOH 132 2232 146 HOH HOH A . I 4 HOH 133 2233 147 HOH HOH A . I 4 HOH 134 2234 148 HOH HOH A . I 4 HOH 135 2235 149 HOH HOH A . I 4 HOH 136 2236 150 HOH HOH A . I 4 HOH 137 2237 151 HOH HOH A . I 4 HOH 138 2238 152 HOH HOH A . I 4 HOH 139 2239 153 HOH HOH A . I 4 HOH 140 2240 154 HOH HOH A . I 4 HOH 141 2241 155 HOH HOH A . I 4 HOH 142 2242 156 HOH HOH A . I 4 HOH 143 2243 157 HOH HOH A . I 4 HOH 144 2244 158 HOH HOH A . I 4 HOH 145 2245 159 HOH HOH A . I 4 HOH 146 2246 161 HOH HOH A . I 4 HOH 147 2247 162 HOH HOH A . I 4 HOH 148 2248 163 HOH HOH A . I 4 HOH 149 2249 164 HOH HOH A . I 4 HOH 150 2250 165 HOH HOH A . I 4 HOH 151 2251 166 HOH HOH A . I 4 HOH 152 2252 167 HOH HOH A . I 4 HOH 153 2253 168 HOH HOH A . I 4 HOH 154 2254 169 HOH HOH A . I 4 HOH 155 2255 170 HOH HOH A . I 4 HOH 156 2256 171 HOH HOH A . I 4 HOH 157 2257 172 HOH HOH A . I 4 HOH 158 2258 173 HOH HOH A . I 4 HOH 159 2259 174 HOH HOH A . I 4 HOH 160 2260 175 HOH HOH A . I 4 HOH 161 2261 176 HOH HOH A . I 4 HOH 162 2262 177 HOH HOH A . I 4 HOH 163 2263 178 HOH HOH A . I 4 HOH 164 2264 179 HOH HOH A . I 4 HOH 165 2265 180 HOH HOH A . I 4 HOH 166 2266 181 HOH HOH A . I 4 HOH 167 2267 182 HOH HOH A . I 4 HOH 168 2268 183 HOH HOH A . I 4 HOH 169 2269 184 HOH HOH A . I 4 HOH 170 2270 187 HOH HOH A . I 4 HOH 171 2271 188 HOH HOH A . I 4 HOH 172 2272 190 HOH HOH A . I 4 HOH 173 2273 191 HOH HOH A . I 4 HOH 174 2274 192 HOH HOH A . I 4 HOH 175 2275 193 HOH HOH A . I 4 HOH 176 2276 194 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-10 2 'Structure model' 1 1 2015-04-15 3 'Structure model' 1 2 2015-04-22 4 'Structure model' 1 3 2015-09-02 5 'Structure model' 1 4 2016-03-16 6 'Structure model' 1 5 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' chem_comp_atom 2 6 'Structure model' chem_comp_bond 3 6 'Structure model' database_2 4 6 'Structure model' pdbx_initial_refinement_model 5 6 'Structure model' struct_ref_seq_dif 6 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_ref_seq_dif.details' 4 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 33.6692 15.7387 11.5060 0.1216 0.2471 0.0192 0.1105 -0.0317 -0.0527 8.4381 1.5696 2.5018 1.0174 -4.0691 0.3910 -0.2422 0.3997 -0.2341 0.1792 0.1871 -0.1064 0.2216 -0.1146 0.0552 'X-RAY DIFFRACTION' 2 ? refined 61.8894 30.7600 3.1771 0.1031 0.0779 0.0303 -0.0105 0.0046 0.0074 1.3452 1.5314 0.6525 0.9337 -0.1578 -0.5271 0.0552 0.0229 -0.0167 0.0682 -0.0178 0.0180 -0.1217 -0.0251 -0.0374 'X-RAY DIFFRACTION' 3 ? refined 57.7479 24.7288 -6.9661 0.1533 0.1691 0.0384 -0.0279 -0.0326 -0.0067 2.5302 7.4033 7.3136 -0.7399 -1.4152 -4.1188 -0.2953 0.3609 -0.0706 -0.5505 0.3471 0.4017 0.6128 -0.3485 -0.0517 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1856 ? ? A 1863 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 1864 ? ? A 1951 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 1952 ? ? A 1972 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0032 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 1971 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -87.60 _pdbx_validate_torsion.psi 49.56 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 1970 ? CG ? A LYS 115 CG 2 1 Y 1 A LYS 1970 ? CD ? A LYS 115 CD 3 1 Y 1 A LYS 1970 ? CE ? A LYS 115 CE 4 1 Y 1 A LYS 1970 ? NZ ? A LYS 115 NZ 5 1 Y 1 A VAL 1971 ? CG1 ? A VAL 116 CG1 6 1 Y 1 A VAL 1971 ? CG2 ? A VAL 116 CG2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3WQ CAA C N N 1 3WQ CAO C N N 2 3WQ CAP C N N 3 3WQ OAQ O N N 4 3WQ CAS C Y N 5 3WQ CAN C Y N 6 3WQ CAX C Y N 7 3WQ CAK C Y N 8 3WQ CAL C Y N 9 3WQ NAY N Y N 10 3WQ CAU C Y N 11 3WQ CAR C N N 12 3WQ OAD O N N 13 3WQ CAB C N N 14 3WQ CAM C Y N 15 3WQ CAV C Y N 16 3WQ CAT C Y N 17 3WQ CAI C Y N 18 3WQ CAG C Y N 19 3WQ CAH C Y N 20 3WQ CAJ C Y N 21 3WQ CAW C Y N 22 3WQ SAZ S N N 23 3WQ OAE O N N 24 3WQ OAF O N N 25 3WQ CAC C N N 26 3WQ H1 H N N 27 3WQ H2 H N N 28 3WQ H3 H N N 29 3WQ H4 H N N 30 3WQ H5 H N N 31 3WQ H6 H N N 32 3WQ H7 H N N 33 3WQ H8 H N N 34 3WQ H9 H N N 35 3WQ H10 H N N 36 3WQ H11 H N N 37 3WQ H12 H N N 38 3WQ H13 H N N 39 3WQ H14 H N N 40 3WQ H15 H N N 41 3WQ H16 H N N 42 3WQ H17 H N N 43 3WQ H18 H N N 44 3WQ H19 H N N 45 3WQ H20 H N N 46 3WQ H21 H N N 47 ALA N N N N 48 ALA CA C N S 49 ALA C C N N 50 ALA O O N N 51 ALA CB C N N 52 ALA OXT O N N 53 ALA H H N N 54 ALA H2 H N N 55 ALA HA H N N 56 ALA HB1 H N N 57 ALA HB2 H N N 58 ALA HB3 H N N 59 ALA HXT H N N 60 ARG N N N N 61 ARG CA C N S 62 ARG C C N N 63 ARG O O N N 64 ARG CB C N N 65 ARG CG C N N 66 ARG CD C N N 67 ARG NE N N N 68 ARG CZ C N N 69 ARG NH1 N N N 70 ARG NH2 N N N 71 ARG OXT O N N 72 ARG H H N N 73 ARG H2 H N N 74 ARG HA H N N 75 ARG HB2 H N N 76 ARG HB3 H N N 77 ARG HG2 H N N 78 ARG HG3 H N N 79 ARG HD2 H N N 80 ARG HD3 H N N 81 ARG HE H N N 82 ARG HH11 H N N 83 ARG HH12 H N N 84 ARG HH21 H N N 85 ARG HH22 H N N 86 ARG HXT H N N 87 ASN N N N N 88 ASN CA C N S 89 ASN C C N N 90 ASN O O N N 91 ASN CB C N N 92 ASN CG C N N 93 ASN OD1 O N N 94 ASN ND2 N N N 95 ASN OXT O N N 96 ASN H H N N 97 ASN H2 H N N 98 ASN HA H N N 99 ASN HB2 H N N 100 ASN HB3 H N N 101 ASN HD21 H N N 102 ASN HD22 H N N 103 ASN HXT H N N 104 ASP N N N N 105 ASP CA C N S 106 ASP C C N N 107 ASP O O N N 108 ASP CB C N N 109 ASP CG C N N 110 ASP OD1 O N N 111 ASP OD2 O N N 112 ASP OXT O N N 113 ASP H H N N 114 ASP H2 H N N 115 ASP HA H N N 116 ASP HB2 H N N 117 ASP HB3 H N N 118 ASP HD2 H N N 119 ASP HXT H N N 120 CYS N N N N 121 CYS CA C N R 122 CYS C C N N 123 CYS O O N N 124 CYS CB C N N 125 CYS SG S N N 126 CYS OXT O N N 127 CYS H H N N 128 CYS H2 H N N 129 CYS HA H N N 130 CYS HB2 H N N 131 CYS HB3 H N N 132 CYS HG H N N 133 CYS HXT H N N 134 EDO C1 C N N 135 EDO O1 O N N 136 EDO C2 C N N 137 EDO O2 O N N 138 EDO H11 H N N 139 EDO H12 H N N 140 EDO HO1 H N N 141 EDO H21 H N N 142 EDO H22 H N N 143 EDO HO2 H N N 144 GLN N N N N 145 GLN CA C N S 146 GLN C C N N 147 GLN O O N N 148 GLN CB C N N 149 GLN CG C N N 150 GLN CD C N N 151 GLN OE1 O N N 152 GLN NE2 N N N 153 GLN OXT O N N 154 GLN H H N N 155 GLN H2 H N N 156 GLN HA H N N 157 GLN HB2 H N N 158 GLN HB3 H N N 159 GLN HG2 H N N 160 GLN HG3 H N N 161 GLN HE21 H N N 162 GLN HE22 H N N 163 GLN HXT H N N 164 GLU N N N N 165 GLU CA C N S 166 GLU C C N N 167 GLU O O N N 168 GLU CB C N N 169 GLU CG C N N 170 GLU CD C N N 171 GLU OE1 O N N 172 GLU OE2 O N N 173 GLU OXT O N N 174 GLU H H N N 175 GLU H2 H N N 176 GLU HA H N N 177 GLU HB2 H N N 178 GLU HB3 H N N 179 GLU HG2 H N N 180 GLU HG3 H N N 181 GLU HE2 H N N 182 GLU HXT H N N 183 GLY N N N N 184 GLY CA C N N 185 GLY C C N N 186 GLY O O N N 187 GLY OXT O N N 188 GLY H H N N 189 GLY H2 H N N 190 GLY HA2 H N N 191 GLY HA3 H N N 192 GLY HXT H N N 193 HIS N N N N 194 HIS CA C N S 195 HIS C C N N 196 HIS O O N N 197 HIS CB C N N 198 HIS CG C Y N 199 HIS ND1 N Y N 200 HIS CD2 C Y N 201 HIS CE1 C Y N 202 HIS NE2 N Y N 203 HIS OXT O N N 204 HIS H H N N 205 HIS H2 H N N 206 HIS HA H N N 207 HIS HB2 H N N 208 HIS HB3 H N N 209 HIS HD1 H N N 210 HIS HD2 H N N 211 HIS HE1 H N N 212 HIS HE2 H N N 213 HIS HXT H N N 214 HOH O O N N 215 HOH H1 H N N 216 HOH H2 H N N 217 ILE N N N N 218 ILE CA C N S 219 ILE C C N N 220 ILE O O N N 221 ILE CB C N S 222 ILE CG1 C N N 223 ILE CG2 C N N 224 ILE CD1 C N N 225 ILE OXT O N N 226 ILE H H N N 227 ILE H2 H N N 228 ILE HA H N N 229 ILE HB H N N 230 ILE HG12 H N N 231 ILE HG13 H N N 232 ILE HG21 H N N 233 ILE HG22 H N N 234 ILE HG23 H N N 235 ILE HD11 H N N 236 ILE HD12 H N N 237 ILE HD13 H N N 238 ILE HXT H N N 239 LEU N N N N 240 LEU CA C N S 241 LEU C C N N 242 LEU O O N N 243 LEU CB C N N 244 LEU CG C N N 245 LEU CD1 C N N 246 LEU CD2 C N N 247 LEU OXT O N N 248 LEU H H N N 249 LEU H2 H N N 250 LEU HA H N N 251 LEU HB2 H N N 252 LEU HB3 H N N 253 LEU HG H N N 254 LEU HD11 H N N 255 LEU HD12 H N N 256 LEU HD13 H N N 257 LEU HD21 H N N 258 LEU HD22 H N N 259 LEU HD23 H N N 260 LEU HXT H N N 261 LYS N N N N 262 LYS CA C N S 263 LYS C C N N 264 LYS O O N N 265 LYS CB C N N 266 LYS CG C N N 267 LYS CD C N N 268 LYS CE C N N 269 LYS NZ N N N 270 LYS OXT O N N 271 LYS H H N N 272 LYS H2 H N N 273 LYS HA H N N 274 LYS HB2 H N N 275 LYS HB3 H N N 276 LYS HG2 H N N 277 LYS HG3 H N N 278 LYS HD2 H N N 279 LYS HD3 H N N 280 LYS HE2 H N N 281 LYS HE3 H N N 282 LYS HZ1 H N N 283 LYS HZ2 H N N 284 LYS HZ3 H N N 285 LYS HXT H N N 286 MET N N N N 287 MET CA C N S 288 MET C C N N 289 MET O O N N 290 MET CB C N N 291 MET CG C N N 292 MET SD S N N 293 MET CE C N N 294 MET OXT O N N 295 MET H H N N 296 MET H2 H N N 297 MET HA H N N 298 MET HB2 H N N 299 MET HB3 H N N 300 MET HG2 H N N 301 MET HG3 H N N 302 MET HE1 H N N 303 MET HE2 H N N 304 MET HE3 H N N 305 MET HXT H N N 306 PHE N N N N 307 PHE CA C N S 308 PHE C C N N 309 PHE O O N N 310 PHE CB C N N 311 PHE CG C Y N 312 PHE CD1 C Y N 313 PHE CD2 C Y N 314 PHE CE1 C Y N 315 PHE CE2 C Y N 316 PHE CZ C Y N 317 PHE OXT O N N 318 PHE H H N N 319 PHE H2 H N N 320 PHE HA H N N 321 PHE HB2 H N N 322 PHE HB3 H N N 323 PHE HD1 H N N 324 PHE HD2 H N N 325 PHE HE1 H N N 326 PHE HE2 H N N 327 PHE HZ H N N 328 PHE HXT H N N 329 PRO N N N N 330 PRO CA C N S 331 PRO C C N N 332 PRO O O N N 333 PRO CB C N N 334 PRO CG C N N 335 PRO CD C N N 336 PRO OXT O N N 337 PRO H H N N 338 PRO HA H N N 339 PRO HB2 H N N 340 PRO HB3 H N N 341 PRO HG2 H N N 342 PRO HG3 H N N 343 PRO HD2 H N N 344 PRO HD3 H N N 345 PRO HXT H N N 346 SER N N N N 347 SER CA C N S 348 SER C C N N 349 SER O O N N 350 SER CB C N N 351 SER OG O N N 352 SER OXT O N N 353 SER H H N N 354 SER H2 H N N 355 SER HA H N N 356 SER HB2 H N N 357 SER HB3 H N N 358 SER HG H N N 359 SER HXT H N N 360 THR N N N N 361 THR CA C N S 362 THR C C N N 363 THR O O N N 364 THR CB C N R 365 THR OG1 O N N 366 THR CG2 C N N 367 THR OXT O N N 368 THR H H N N 369 THR H2 H N N 370 THR HA H N N 371 THR HB H N N 372 THR HG1 H N N 373 THR HG21 H N N 374 THR HG22 H N N 375 THR HG23 H N N 376 THR HXT H N N 377 TRP N N N N 378 TRP CA C N S 379 TRP C C N N 380 TRP O O N N 381 TRP CB C N N 382 TRP CG C Y N 383 TRP CD1 C Y N 384 TRP CD2 C Y N 385 TRP NE1 N Y N 386 TRP CE2 C Y N 387 TRP CE3 C Y N 388 TRP CZ2 C Y N 389 TRP CZ3 C Y N 390 TRP CH2 C Y N 391 TRP OXT O N N 392 TRP H H N N 393 TRP H2 H N N 394 TRP HA H N N 395 TRP HB2 H N N 396 TRP HB3 H N N 397 TRP HD1 H N N 398 TRP HE1 H N N 399 TRP HE3 H N N 400 TRP HZ2 H N N 401 TRP HZ3 H N N 402 TRP HH2 H N N 403 TRP HXT H N N 404 TYR N N N N 405 TYR CA C N S 406 TYR C C N N 407 TYR O O N N 408 TYR CB C N N 409 TYR CG C Y N 410 TYR CD1 C Y N 411 TYR CD2 C Y N 412 TYR CE1 C Y N 413 TYR CE2 C Y N 414 TYR CZ C Y N 415 TYR OH O N N 416 TYR OXT O N N 417 TYR H H N N 418 TYR H2 H N N 419 TYR HA H N N 420 TYR HB2 H N N 421 TYR HB3 H N N 422 TYR HD1 H N N 423 TYR HD2 H N N 424 TYR HE1 H N N 425 TYR HE2 H N N 426 TYR HH H N N 427 TYR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3WQ CAG CAI doub Y N 1 3WQ CAG CAH sing Y N 2 3WQ CAI CAT sing Y N 3 3WQ OAD CAR doub N N 4 3WQ CAK CAL doub Y N 5 3WQ CAK CAS sing Y N 6 3WQ CAL NAY sing Y N 7 3WQ OAQ CAS sing N N 8 3WQ OAQ CAP sing N N 9 3WQ CAR CAB sing N N 10 3WQ CAR CAU sing N N 11 3WQ CAS CAN doub Y N 12 3WQ NAY CAU sing Y N 13 3WQ NAY CAX sing Y N 14 3WQ CAU CAM doub Y N 15 3WQ CAP CAO sing N N 16 3WQ CAN CAX sing Y N 17 3WQ CAO CAA sing N N 18 3WQ CAX CAV doub Y N 19 3WQ CAM CAV sing Y N 20 3WQ CAV CAT sing N N 21 3WQ CAH CAJ doub Y N 22 3WQ CAT CAW doub Y N 23 3WQ CAJ CAW sing Y N 24 3WQ CAW SAZ sing N N 25 3WQ SAZ CAC sing N N 26 3WQ SAZ OAF doub N N 27 3WQ SAZ OAE doub N N 28 3WQ CAA H1 sing N N 29 3WQ CAA H2 sing N N 30 3WQ CAA H3 sing N N 31 3WQ CAO H4 sing N N 32 3WQ CAO H5 sing N N 33 3WQ CAP H6 sing N N 34 3WQ CAP H7 sing N N 35 3WQ CAN H8 sing N N 36 3WQ CAK H9 sing N N 37 3WQ CAL H10 sing N N 38 3WQ CAB H11 sing N N 39 3WQ CAB H12 sing N N 40 3WQ CAB H13 sing N N 41 3WQ CAM H14 sing N N 42 3WQ CAI H15 sing N N 43 3WQ CAG H16 sing N N 44 3WQ CAH H17 sing N N 45 3WQ CAJ H18 sing N N 46 3WQ CAC H19 sing N N 47 3WQ CAC H20 sing N N 48 3WQ CAC H21 sing N N 49 ALA N CA sing N N 50 ALA N H sing N N 51 ALA N H2 sing N N 52 ALA CA C sing N N 53 ALA CA CB sing N N 54 ALA CA HA sing N N 55 ALA C O doub N N 56 ALA C OXT sing N N 57 ALA CB HB1 sing N N 58 ALA CB HB2 sing N N 59 ALA CB HB3 sing N N 60 ALA OXT HXT sing N N 61 ARG N CA sing N N 62 ARG N H sing N N 63 ARG N H2 sing N N 64 ARG CA C sing N N 65 ARG CA CB sing N N 66 ARG CA HA sing N N 67 ARG C O doub N N 68 ARG C OXT sing N N 69 ARG CB CG sing N N 70 ARG CB HB2 sing N N 71 ARG CB HB3 sing N N 72 ARG CG CD sing N N 73 ARG CG HG2 sing N N 74 ARG CG HG3 sing N N 75 ARG CD NE sing N N 76 ARG CD HD2 sing N N 77 ARG CD HD3 sing N N 78 ARG NE CZ sing N N 79 ARG NE HE sing N N 80 ARG CZ NH1 sing N N 81 ARG CZ NH2 doub N N 82 ARG NH1 HH11 sing N N 83 ARG NH1 HH12 sing N N 84 ARG NH2 HH21 sing N N 85 ARG NH2 HH22 sing N N 86 ARG OXT HXT sing N N 87 ASN N CA sing N N 88 ASN N H sing N N 89 ASN N H2 sing N N 90 ASN CA C sing N N 91 ASN CA CB sing N N 92 ASN CA HA sing N N 93 ASN C O doub N N 94 ASN C OXT sing N N 95 ASN CB CG sing N N 96 ASN CB HB2 sing N N 97 ASN CB HB3 sing N N 98 ASN CG OD1 doub N N 99 ASN CG ND2 sing N N 100 ASN ND2 HD21 sing N N 101 ASN ND2 HD22 sing N N 102 ASN OXT HXT sing N N 103 ASP N CA sing N N 104 ASP N H sing N N 105 ASP N H2 sing N N 106 ASP CA C sing N N 107 ASP CA CB sing N N 108 ASP CA HA sing N N 109 ASP C O doub N N 110 ASP C OXT sing N N 111 ASP CB CG sing N N 112 ASP CB HB2 sing N N 113 ASP CB HB3 sing N N 114 ASP CG OD1 doub N N 115 ASP CG OD2 sing N N 116 ASP OD2 HD2 sing N N 117 ASP OXT HXT sing N N 118 CYS N CA sing N N 119 CYS N H sing N N 120 CYS N H2 sing N N 121 CYS CA C sing N N 122 CYS CA CB sing N N 123 CYS CA HA sing N N 124 CYS C O doub N N 125 CYS C OXT sing N N 126 CYS CB SG sing N N 127 CYS CB HB2 sing N N 128 CYS CB HB3 sing N N 129 CYS SG HG sing N N 130 CYS OXT HXT sing N N 131 EDO C1 O1 sing N N 132 EDO C1 C2 sing N N 133 EDO C1 H11 sing N N 134 EDO C1 H12 sing N N 135 EDO O1 HO1 sing N N 136 EDO C2 O2 sing N N 137 EDO C2 H21 sing N N 138 EDO C2 H22 sing N N 139 EDO O2 HO2 sing N N 140 GLN N CA sing N N 141 GLN N H sing N N 142 GLN N H2 sing N N 143 GLN CA C sing N N 144 GLN CA CB sing N N 145 GLN CA HA sing N N 146 GLN C O doub N N 147 GLN C OXT sing N N 148 GLN CB CG sing N N 149 GLN CB HB2 sing N N 150 GLN CB HB3 sing N N 151 GLN CG CD sing N N 152 GLN CG HG2 sing N N 153 GLN CG HG3 sing N N 154 GLN CD OE1 doub N N 155 GLN CD NE2 sing N N 156 GLN NE2 HE21 sing N N 157 GLN NE2 HE22 sing N N 158 GLN OXT HXT sing N N 159 GLU N CA sing N N 160 GLU N H sing N N 161 GLU N H2 sing N N 162 GLU CA C sing N N 163 GLU CA CB sing N N 164 GLU CA HA sing N N 165 GLU C O doub N N 166 GLU C OXT sing N N 167 GLU CB CG sing N N 168 GLU CB HB2 sing N N 169 GLU CB HB3 sing N N 170 GLU CG CD sing N N 171 GLU CG HG2 sing N N 172 GLU CG HG3 sing N N 173 GLU CD OE1 doub N N 174 GLU CD OE2 sing N N 175 GLU OE2 HE2 sing N N 176 GLU OXT HXT sing N N 177 GLY N CA sing N N 178 GLY N H sing N N 179 GLY N H2 sing N N 180 GLY CA C sing N N 181 GLY CA HA2 sing N N 182 GLY CA HA3 sing N N 183 GLY C O doub N N 184 GLY C OXT sing N N 185 GLY OXT HXT sing N N 186 HIS N CA sing N N 187 HIS N H sing N N 188 HIS N H2 sing N N 189 HIS CA C sing N N 190 HIS CA CB sing N N 191 HIS CA HA sing N N 192 HIS C O doub N N 193 HIS C OXT sing N N 194 HIS CB CG sing N N 195 HIS CB HB2 sing N N 196 HIS CB HB3 sing N N 197 HIS CG ND1 sing Y N 198 HIS CG CD2 doub Y N 199 HIS ND1 CE1 doub Y N 200 HIS ND1 HD1 sing N N 201 HIS CD2 NE2 sing Y N 202 HIS CD2 HD2 sing N N 203 HIS CE1 NE2 sing Y N 204 HIS CE1 HE1 sing N N 205 HIS NE2 HE2 sing N N 206 HIS OXT HXT sing N N 207 HOH O H1 sing N N 208 HOH O H2 sing N N 209 ILE N CA sing N N 210 ILE N H sing N N 211 ILE N H2 sing N N 212 ILE CA C sing N N 213 ILE CA CB sing N N 214 ILE CA HA sing N N 215 ILE C O doub N N 216 ILE C OXT sing N N 217 ILE CB CG1 sing N N 218 ILE CB CG2 sing N N 219 ILE CB HB sing N N 220 ILE CG1 CD1 sing N N 221 ILE CG1 HG12 sing N N 222 ILE CG1 HG13 sing N N 223 ILE CG2 HG21 sing N N 224 ILE CG2 HG22 sing N N 225 ILE CG2 HG23 sing N N 226 ILE CD1 HD11 sing N N 227 ILE CD1 HD12 sing N N 228 ILE CD1 HD13 sing N N 229 ILE OXT HXT sing N N 230 LEU N CA sing N N 231 LEU N H sing N N 232 LEU N H2 sing N N 233 LEU CA C sing N N 234 LEU CA CB sing N N 235 LEU CA HA sing N N 236 LEU C O doub N N 237 LEU C OXT sing N N 238 LEU CB CG sing N N 239 LEU CB HB2 sing N N 240 LEU CB HB3 sing N N 241 LEU CG CD1 sing N N 242 LEU CG CD2 sing N N 243 LEU CG HG sing N N 244 LEU CD1 HD11 sing N N 245 LEU CD1 HD12 sing N N 246 LEU CD1 HD13 sing N N 247 LEU CD2 HD21 sing N N 248 LEU CD2 HD22 sing N N 249 LEU CD2 HD23 sing N N 250 LEU OXT HXT sing N N 251 LYS N CA sing N N 252 LYS N H sing N N 253 LYS N H2 sing N N 254 LYS CA C sing N N 255 LYS CA CB sing N N 256 LYS CA HA sing N N 257 LYS C O doub N N 258 LYS C OXT sing N N 259 LYS CB CG sing N N 260 LYS CB HB2 sing N N 261 LYS CB HB3 sing N N 262 LYS CG CD sing N N 263 LYS CG HG2 sing N N 264 LYS CG HG3 sing N N 265 LYS CD CE sing N N 266 LYS CD HD2 sing N N 267 LYS CD HD3 sing N N 268 LYS CE NZ sing N N 269 LYS CE HE2 sing N N 270 LYS CE HE3 sing N N 271 LYS NZ HZ1 sing N N 272 LYS NZ HZ2 sing N N 273 LYS NZ HZ3 sing N N 274 LYS OXT HXT sing N N 275 MET N CA sing N N 276 MET N H sing N N 277 MET N H2 sing N N 278 MET CA C sing N N 279 MET CA CB sing N N 280 MET CA HA sing N N 281 MET C O doub N N 282 MET C OXT sing N N 283 MET CB CG sing N N 284 MET CB HB2 sing N N 285 MET CB HB3 sing N N 286 MET CG SD sing N N 287 MET CG HG2 sing N N 288 MET CG HG3 sing N N 289 MET SD CE sing N N 290 MET CE HE1 sing N N 291 MET CE HE2 sing N N 292 MET CE HE3 sing N N 293 MET OXT HXT sing N N 294 PHE N CA sing N N 295 PHE N H sing N N 296 PHE N H2 sing N N 297 PHE CA C sing N N 298 PHE CA CB sing N N 299 PHE CA HA sing N N 300 PHE C O doub N N 301 PHE C OXT sing N N 302 PHE CB CG sing N N 303 PHE CB HB2 sing N N 304 PHE CB HB3 sing N N 305 PHE CG CD1 doub Y N 306 PHE CG CD2 sing Y N 307 PHE CD1 CE1 sing Y N 308 PHE CD1 HD1 sing N N 309 PHE CD2 CE2 doub Y N 310 PHE CD2 HD2 sing N N 311 PHE CE1 CZ doub Y N 312 PHE CE1 HE1 sing N N 313 PHE CE2 CZ sing Y N 314 PHE CE2 HE2 sing N N 315 PHE CZ HZ sing N N 316 PHE OXT HXT sing N N 317 PRO N CA sing N N 318 PRO N CD sing N N 319 PRO N H sing N N 320 PRO CA C sing N N 321 PRO CA CB sing N N 322 PRO CA HA sing N N 323 PRO C O doub N N 324 PRO C OXT sing N N 325 PRO CB CG sing N N 326 PRO CB HB2 sing N N 327 PRO CB HB3 sing N N 328 PRO CG CD sing N N 329 PRO CG HG2 sing N N 330 PRO CG HG3 sing N N 331 PRO CD HD2 sing N N 332 PRO CD HD3 sing N N 333 PRO OXT HXT sing N N 334 SER N CA sing N N 335 SER N H sing N N 336 SER N H2 sing N N 337 SER CA C sing N N 338 SER CA CB sing N N 339 SER CA HA sing N N 340 SER C O doub N N 341 SER C OXT sing N N 342 SER CB OG sing N N 343 SER CB HB2 sing N N 344 SER CB HB3 sing N N 345 SER OG HG sing N N 346 SER OXT HXT sing N N 347 THR N CA sing N N 348 THR N H sing N N 349 THR N H2 sing N N 350 THR CA C sing N N 351 THR CA CB sing N N 352 THR CA HA sing N N 353 THR C O doub N N 354 THR C OXT sing N N 355 THR CB OG1 sing N N 356 THR CB CG2 sing N N 357 THR CB HB sing N N 358 THR OG1 HG1 sing N N 359 THR CG2 HG21 sing N N 360 THR CG2 HG22 sing N N 361 THR CG2 HG23 sing N N 362 THR OXT HXT sing N N 363 TRP N CA sing N N 364 TRP N H sing N N 365 TRP N H2 sing N N 366 TRP CA C sing N N 367 TRP CA CB sing N N 368 TRP CA HA sing N N 369 TRP C O doub N N 370 TRP C OXT sing N N 371 TRP CB CG sing N N 372 TRP CB HB2 sing N N 373 TRP CB HB3 sing N N 374 TRP CG CD1 doub Y N 375 TRP CG CD2 sing Y N 376 TRP CD1 NE1 sing Y N 377 TRP CD1 HD1 sing N N 378 TRP CD2 CE2 doub Y N 379 TRP CD2 CE3 sing Y N 380 TRP NE1 CE2 sing Y N 381 TRP NE1 HE1 sing N N 382 TRP CE2 CZ2 sing Y N 383 TRP CE3 CZ3 doub Y N 384 TRP CE3 HE3 sing N N 385 TRP CZ2 CH2 doub Y N 386 TRP CZ2 HZ2 sing N N 387 TRP CZ3 CH2 sing Y N 388 TRP CZ3 HZ3 sing N N 389 TRP CH2 HH2 sing N N 390 TRP OXT HXT sing N N 391 TYR N CA sing N N 392 TYR N H sing N N 393 TYR N H2 sing N N 394 TYR CA C sing N N 395 TYR CA CB sing N N 396 TYR CA HA sing N N 397 TYR C O doub N N 398 TYR C OXT sing N N 399 TYR CB CG sing N N 400 TYR CB HB2 sing N N 401 TYR CB HB3 sing N N 402 TYR CG CD1 doub Y N 403 TYR CG CD2 sing Y N 404 TYR CD1 CE1 sing Y N 405 TYR CD1 HD1 sing N N 406 TYR CD2 CE2 doub Y N 407 TYR CD2 HD2 sing N N 408 TYR CE1 CZ doub Y N 409 TYR CE1 HE1 sing N N 410 TYR CE2 CZ sing Y N 411 TYR CE2 HE2 sing N N 412 TYR CZ OH sing N N 413 TYR OH HH sing N N 414 TYR OXT HXT sing N N 415 VAL N CA sing N N 416 VAL N H sing N N 417 VAL N H2 sing N N 418 VAL CA C sing N N 419 VAL CA CB sing N N 420 VAL CA HA sing N N 421 VAL C O doub N N 422 VAL C OXT sing N N 423 VAL CB CG1 sing N N 424 VAL CB CG2 sing N N 425 VAL CB HB sing N N 426 VAL CG1 HG11 sing N N 427 VAL CG1 HG12 sing N N 428 VAL CG1 HG13 sing N N 429 VAL CG2 HG21 sing N N 430 VAL CG2 HG22 sing N N 431 VAL CG2 HG23 sing N N 432 VAL OXT HXT sing N N 433 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '1-{1-[2-(methylsulfonyl)phenyl]-7-propoxyindolizin-3-yl}ethanone' 3WQ 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3G0L _pdbx_initial_refinement_model.details ? #