HEADER HYDROLASE 30-NOV-14 4RW0 TITLE CRYSTAL STRUCTURE OF A MEMBER OF THE LIPOLYTIC PROTEIN G-D-S-L FAMILY TITLE 2 FROM VEILLONELLA PARVULA DSM 2008 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOLYTIC PROTEIN G-D-S-L FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VEILLONELLA PARVULA DSM 2008; SOURCE 3 ORGANISM_TAXID: 479436; SOURCE 4 GENE: VPAR_1673; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIPOLYTIC PROTEIN G-D-S-L FAMILY, MCSG,PSI, STRUCTURAL GENOMICS, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, LIPASE/ACYLHYDROLASE FAMILY KEYWDS 3 PROTEIN, PSI-BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,C.HATZOS-SKINTGES,S.CLANCY,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 1 28-JAN-15 4RW0 0 JRNL AUTH B.NOCEK,C.HATZOS-SKINTGES,S.CLANCY,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF A MEMBER OF THE LIPOLYTIC PROTEIN JRNL TITL 2 G-D-S-L FAMILY FROM VEILLONELLA PARVULA DSM 2008 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 44601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2384 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2805 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 167 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2882 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 343 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.14000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.725 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2999 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2807 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4067 ; 1.759 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6443 ; 0.873 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 379 ; 5.690 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 146 ;37.418 ;24.932 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 464 ;14.153 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;20.903 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 464 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3447 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 692 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4RW0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-14. REMARK 100 THE RCSB ID CODE IS RCSB087864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47389 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M K/NA TARTRATE, 0.2M LI2SO4, PH REMARK 280 7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.08650 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.08650 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.08650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A -1 CG OD1 ND2 REMARK 470 ARG B 181 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 8 -150.48 -104.40 REMARK 500 ASP A 113 63.15 -152.44 REMARK 500 ASP B 8 -155.39 -105.05 REMARK 500 ASP B 62 105.13 -160.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 557 DISTANCE = 5.44 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 30 O REMARK 620 2 VAL A 33 O 89.2 REMARK 620 3 ASP A 27 O 84.9 124.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE B 30 O REMARK 620 2 VAL B 33 O 81.5 REMARK 620 3 ASP B 27 O 92.8 129.4 REMARK 620 4 ASP B 27 OD1 132.9 73.0 75.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC100840 RELATED DB: TARGETTRACK DBREF 4RW0 A 1 182 UNP D1BPP2 D1BPP2_VEIPT 1 182 DBREF 4RW0 B 1 182 UNP D1BPP2 D1BPP2_VEIPT 1 182 SEQADV 4RW0 SER A -2 UNP D1BPP2 EXPRESSION TAG SEQADV 4RW0 ASN A -1 UNP D1BPP2 EXPRESSION TAG SEQADV 4RW0 ALA A 0 UNP D1BPP2 EXPRESSION TAG SEQADV 4RW0 SER B -2 UNP D1BPP2 EXPRESSION TAG SEQADV 4RW0 ASN B -1 UNP D1BPP2 EXPRESSION TAG SEQADV 4RW0 ALA B 0 UNP D1BPP2 EXPRESSION TAG SEQRES 1 A 185 SER ASN ALA MSE GLU ILE ILE CYS PHE GLY ASP SER ILE SEQRES 2 A 185 THR ARG GLY TYR ASP VAL PRO TYR GLY ARG GLY TRP VAL SEQRES 3 A 185 GLU ILE CYS ASP ALA SER ILE GLU ASN VAL ASN PHE THR SEQRES 4 A 185 ASN TYR GLY GLU ASP GLY CYS SER VAL GLN GLY MSE ILE SEQRES 5 A 185 TYR ASN ILE GLU ASN TRP ALA VAL THR ALA VAL SER ASP SEQRES 6 A 185 PRO THR ARG HIS ILE PHE LEU MSE CYS GLY THR ASN ASP SEQRES 7 A 185 ILE LEU GLN GLY ARG ASP SER THR TYR VAL TYR LYS THR SEQRES 8 A 185 LEU VAL LYS ALA ILE GLU LEU ALA SER THR LYS GLY MSE SEQRES 9 A 185 VAL ILE ILE GLY LEU GLU THR GLN ILE ASP SER ASP MSE SEQRES 10 A 185 ASP GLY LEU ASP LEU VAL VAL ARG GLU VAL ASN GLU GLN SEQRES 11 A 185 LEU LYS ALA TYR ALA ALA GLU HIS ASN ILE LYS VAL ILE SEQRES 12 A 185 ASP PHE TYR THR THR LEU PHE GLU ALA ASP GLN ILE GLY SEQRES 13 A 185 GLN ILE VAL PHE ALA GLY GLU VAL HIS PRO ASN GLU ARG SEQRES 14 A 185 GLY TYR ARG LEU MSE ALA TYR LYS ALA LEU GLU VAL PHE SEQRES 15 A 185 THR ARG LEU SEQRES 1 B 185 SER ASN ALA MSE GLU ILE ILE CYS PHE GLY ASP SER ILE SEQRES 2 B 185 THR ARG GLY TYR ASP VAL PRO TYR GLY ARG GLY TRP VAL SEQRES 3 B 185 GLU ILE CYS ASP ALA SER ILE GLU ASN VAL ASN PHE THR SEQRES 4 B 185 ASN TYR GLY GLU ASP GLY CYS SER VAL GLN GLY MSE ILE SEQRES 5 B 185 TYR ASN ILE GLU ASN TRP ALA VAL THR ALA VAL SER ASP SEQRES 6 B 185 PRO THR ARG HIS ILE PHE LEU MSE CYS GLY THR ASN ASP SEQRES 7 B 185 ILE LEU GLN GLY ARG ASP SER THR TYR VAL TYR LYS THR SEQRES 8 B 185 LEU VAL LYS ALA ILE GLU LEU ALA SER THR LYS GLY MSE SEQRES 9 B 185 VAL ILE ILE GLY LEU GLU THR GLN ILE ASP SER ASP MSE SEQRES 10 B 185 ASP GLY LEU ASP LEU VAL VAL ARG GLU VAL ASN GLU GLN SEQRES 11 B 185 LEU LYS ALA TYR ALA ALA GLU HIS ASN ILE LYS VAL ILE SEQRES 12 B 185 ASP PHE TYR THR THR LEU PHE GLU ALA ASP GLN ILE GLY SEQRES 13 B 185 GLN ILE VAL PHE ALA GLY GLU VAL HIS PRO ASN GLU ARG SEQRES 14 B 185 GLY TYR ARG LEU MSE ALA TYR LYS ALA LEU GLU VAL PHE SEQRES 15 B 185 THR ARG LEU MODRES 4RW0 MSE A 1 MET SELENOMETHIONINE MODRES 4RW0 MSE A 48 MET SELENOMETHIONINE MODRES 4RW0 MSE A 70 MET SELENOMETHIONINE MODRES 4RW0 MSE A 101 MET SELENOMETHIONINE MODRES 4RW0 MSE A 114 MET SELENOMETHIONINE MODRES 4RW0 MSE A 171 MET SELENOMETHIONINE MODRES 4RW0 MSE B 1 MET SELENOMETHIONINE MODRES 4RW0 MSE B 48 MET SELENOMETHIONINE MODRES 4RW0 MSE B 70 MET SELENOMETHIONINE MODRES 4RW0 MSE B 101 MET SELENOMETHIONINE MODRES 4RW0 MSE B 114 MET SELENOMETHIONINE MODRES 4RW0 MSE B 171 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 48 8 HET MSE A 70 8 HET MSE A 101 8 HET MSE A 114 8 HET MSE A 171 8 HET MSE B 1 8 HET MSE B 48 8 HET MSE B 70 8 HET MSE B 101 8 HET MSE B 114 8 HET MSE B 171 8 HET GOL A 501 12 HET NA A 502 1 HET GOL B 301 6 HET NA B 302 1 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 NA 2(NA 1+) FORMUL 7 HOH *343(H2 O) HELIX 1 1 ASP A 8 GLY A 13 1 6 HELIX 2 2 GLY A 21 ILE A 30 1 10 HELIX 3 3 SER A 44 VAL A 57 1 14 HELIX 4 4 GLY A 72 GLN A 78 1 7 HELIX 5 5 ASP A 81 THR A 98 1 18 HELIX 6 6 GLY A 116 ASN A 136 1 21 HELIX 7 7 ASP A 141 ILE A 152 1 12 HELIX 8 8 ASN A 164 THR A 180 1 17 HELIX 9 9 ASP B 8 GLY B 13 1 6 HELIX 10 10 GLY B 21 ILE B 30 1 10 HELIX 11 11 SER B 44 THR B 58 1 15 HELIX 12 12 GLY B 72 GLN B 78 1 7 HELIX 13 13 ASP B 81 SER B 97 1 17 HELIX 14 14 GLY B 116 HIS B 135 1 20 HELIX 15 15 ASP B 141 ILE B 152 1 12 HELIX 16 16 ASN B 164 THR B 180 1 17 SHEET 1 A 5 VAL A 33 ASN A 37 0 SHEET 2 A 5 MSE A 1 GLY A 7 1 N MSE A 1 O ASN A 34 SHEET 3 A 5 HIS A 66 MSE A 70 1 O PHE A 68 N ILE A 4 SHEET 4 A 5 MSE A 101 GLY A 105 1 O ILE A 103 N ILE A 67 SHEET 5 A 5 LYS A 138 ILE A 140 1 O ILE A 140 N ILE A 104 SHEET 1 B 5 VAL B 33 ASN B 37 0 SHEET 2 B 5 MSE B 1 GLY B 7 1 N CYS B 5 O THR B 36 SHEET 3 B 5 HIS B 66 MSE B 70 1 O PHE B 68 N PHE B 6 SHEET 4 B 5 MSE B 101 GLY B 105 1 O MSE B 101 N ILE B 67 SHEET 5 B 5 LYS B 138 ILE B 140 1 O ILE B 140 N ILE B 104 LINK C ALA A 0 N MSE A 1 1555 1555 1.32 LINK C MSE A 1 N GLU A 2 1555 1555 1.33 LINK C GLY A 47 N MSE A 48 1555 1555 1.32 LINK C MSE A 48 N ILE A 49 1555 1555 1.32 LINK C LEU A 69 N MSE A 70 1555 1555 1.30 LINK C MSE A 70 N CYS A 71 1555 1555 1.34 LINK C GLY A 100 N MSE A 101 1555 1555 1.31 LINK C MSE A 101 N VAL A 102 1555 1555 1.32 LINK C ASP A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N ASP A 115 1555 1555 1.33 LINK C LEU A 170 N MSE A 171 1555 1555 1.33 LINK C MSE A 171 N ALA A 172 1555 1555 1.33 LINK C ALA B 0 N MSE B 1 1555 1555 1.34 LINK C MSE B 1 N GLU B 2 1555 1555 1.35 LINK C GLY B 47 N MSE B 48 1555 1555 1.33 LINK C MSE B 48 N ILE B 49 1555 1555 1.34 LINK C LEU B 69 N MSE B 70 1555 1555 1.33 LINK C MSE B 70 N CYS B 71 1555 1555 1.33 LINK C GLY B 100 N MSE B 101 1555 1555 1.34 LINK C MSE B 101 N VAL B 102 1555 1555 1.32 LINK C ASP B 113 N MSE B 114 1555 1555 1.33 LINK C MSE B 114 N ASP B 115 1555 1555 1.34 LINK C LEU B 170 N MSE B 171 1555 1555 1.32 LINK C MSE B 171 N ALA B 172 1555 1555 1.30 LINK O ILE A 30 NA NA A 502 1555 1555 2.32 LINK O ILE B 30 NA NA B 302 1555 1555 2.33 LINK O VAL B 33 NA NA B 302 1555 1555 2.33 LINK O VAL A 33 NA NA A 502 1555 1555 2.33 LINK O ASP B 27 NA NA B 302 1555 1555 2.39 LINK O ASP A 27 NA NA A 502 1555 1555 2.45 LINK OD1 ASP B 27 NA NA B 302 1555 1555 3.09 CISPEP 1 TYR A 14 ASP A 15 0 7.87 CISPEP 2 TYR B 14 ASP B 15 0 2.83 SITE 1 AC1 8 GLN A 154 ARG A 166 ARG A 169 LEU A 170 SITE 2 AC1 8 TYR A 173 HOH A 730 TYR B 173 LEU B 176 SITE 1 AC2 4 ASP A 27 ILE A 30 GLU A 31 VAL A 33 SITE 1 AC3 6 ALA B 158 GLY B 159 GLU B 160 VAL B 161 SITE 2 AC3 6 HIS B 162 HOH B 482 SITE 1 AC4 3 ASP B 27 ILE B 30 VAL B 33 CRYST1 121.650 121.650 84.173 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008220 0.004746 0.000000 0.00000 SCALE2 0.000000 0.009492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011880 0.00000