HEADER SIGNALING PROTEIN 09-JAN-15 4S19 OBSLTE 28-DEC-16 4S19 5WSJ TITLE CRYSTAL STRUCTURE OF TERNARY COMPLEX OF SIGNALING PROTEIN SPB-40 WITH TITLE 2 N-ACETYL GLUCOSAMINE AND MANNOSE AT 1.64 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE-3-LIKE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAMMARY GLAND PROTEIN 40, SPB-40 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BUBALUS BUBALIS; SOURCE 3 ORGANISM_COMMON: DOMESTIC WATER BUFFALO,RIVER BUFFALO; SOURCE 4 ORGANISM_TAXID: 89462 KEYWDS CHITINASE-3-LIKE PROTEIN 1, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.S.KUSHWAHA,A.CHAUDHARY,P.KAUR,S.SHARMA,T.P.SINGH REVDAT 2 28-DEC-16 4S19 1 OBSLTE REVDAT 1 11-FEB-15 4S19 0 JRNL AUTH G.S.KUSHWAHA,A.CHAUDHARY,P.KAUR,S.SHARMA,T.P.SINGH JRNL TITL CRYSTAL STRUCTURE OF TERNARY COMPLEX OF SIGNALING PROTEIN JRNL TITL 2 SPB-40 WITH N-ACETYL GLUCOSAMINE AND MANNOSE AT 1.64 JRNL TITL 3 ANGSTROM RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 50253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2543 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3397 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 200 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2885 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 407 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : -0.42000 REMARK 3 B33 (A**2) : 0.16000 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.087 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.591 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3006 ; 0.022 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2786 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4082 ; 2.162 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6375 ; 1.022 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 359 ; 6.217 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;35.364 ;23.028 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 476 ;15.815 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;21.849 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 442 ; 0.143 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3395 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 751 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1442 ; 2.871 ; 2.551 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1441 ; 2.871 ; 2.548 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1799 ; 3.988 ; 3.816 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1800 ; 3.988 ; 3.819 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1564 ; 3.987 ; 3.118 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1564 ; 3.987 ; 3.118 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2284 ; 6.021 ; 4.503 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3812 ; 8.639 ;23.917 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3578 ; 8.457 ;22.843 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4S19 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-15. REMARK 100 THE RCSB ID CODE IS RCSB088052. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52856 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 56.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05200 REMARK 200 FOR THE DATA SET : 50.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.30900 REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4MPK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS-HCL, 12% ETHANOL, PH 6.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.57100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.00250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.27650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.00250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.57100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.27650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 19.40 57.66 REMARK 500 ALA A 117 64.11 -119.98 REMARK 500 THR A 184 47.80 -92.75 REMARK 500 TYR A 185 24.06 -148.88 REMARK 500 GLN A 193 2.76 84.57 REMARK 500 ASP A 252 -162.97 -113.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAN A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Q7N RELATED DB: PDB DBREF 4S19 A 1 362 UNP Q7YS85 CH3L1_BUBBU 22 383 SEQADV 4S19 ASN A 68 UNP Q7YS85 LYS 89 CONFLICT SEQADV 4S19 ALA A 81 UNP Q7YS85 GLY 102 CONFLICT SEQADV 4S19 ASN A 205 UNP Q7YS85 GLN 226 CONFLICT SEQADV 4S19 A UNP Q7YS85 ASP 232 DELETION SEQADV 4S19 ARG A 265 UNP Q7YS85 GLN 286 CONFLICT SEQADV 4S19 ARG A 361 UNP Q7YS85 GLY 382 CONFLICT SEQRES 1 A 361 TYR LYS LEU ILE CYS TYR TYR THR SER TRP SER GLN TYR SEQRES 2 A 361 ARG GLU GLY ASP GLY SER CYS PHE PRO ASP ALA ILE ASP SEQRES 3 A 361 PRO PHE LEU CYS THR HIS VAL ILE TYR SER PHE ALA ASN SEQRES 4 A 361 ILE SER ASN ASN GLU ILE ASP THR TRP GLU TRP ASN ASP SEQRES 5 A 361 VAL THR LEU TYR ASP THR LEU ASN THR LEU LYS ASN ARG SEQRES 6 A 361 ASN PRO ASN LEU LYS THR LEU LEU SER VAL GLY GLY TRP SEQRES 7 A 361 ASN PHE ALA SER GLN ARG PHE SER LYS ILE ALA SER LYS SEQRES 8 A 361 THR GLN SER ARG ARG THR PHE ILE LYS SER VAL PRO PRO SEQRES 9 A 361 PHE LEU ARG THR HIS GLY PHE ASP GLY LEU ASP LEU ALA SEQRES 10 A 361 TRP LEU TYR PRO GLY TRP ARG ASP LYS ARG HIS LEU THR SEQRES 11 A 361 THR LEU VAL LYS GLU MET LYS ALA GLU PHE VAL ARG GLU SEQRES 12 A 361 ALA GLN ALA GLY THR GLU GLN LEU LEU LEU SER ALA ALA SEQRES 13 A 361 VAL PRO ALA GLY LYS ILE ALA ILE ASP ARG GLY TYR ASP SEQRES 14 A 361 ILE ALA GLN ILE SER ARG HIS LEU ASP PHE ILE SER LEU SEQRES 15 A 361 LEU THR TYR ASP PHE HIS GLY ALA TRP ARG GLN THR VAL SEQRES 16 A 361 GLY HIS HIS SER PRO LEU PHE ARG GLY ASN GLU ASP ALA SEQRES 17 A 361 SER SER ARG PHE SER ASN ALA ASP TYR ALA VAL SER TYR SEQRES 18 A 361 MET LEU ARG LEU GLY ALA PRO ALA ASN LYS LEU VAL MET SEQRES 19 A 361 GLY ILE PRO THR PHE GLY LYS SER TYR THR LEU ALA SER SEQRES 20 A 361 SER LYS THR ASP VAL GLY ALA PRO ILE SER GLY PRO GLY SEQRES 21 A 361 ILE PRO GLY ARG PHE THR LYS GLU LYS GLY ILE LEU ALA SEQRES 22 A 361 TYR TYR GLU ILE CYS ASP PHE LEU HIS GLY ALA THR THR SEQRES 23 A 361 HIS ARG PHE ARG ASP GLN GLN VAL PRO TYR ALA THR LYS SEQRES 24 A 361 GLY ASN GLN TRP VAL ALA TYR ASP ASP GLN GLU SER VAL SEQRES 25 A 361 LYS ASN LYS ALA ARG TYR LEU LYS ASN ARG GLN LEU ALA SEQRES 26 A 361 GLY ALA MET VAL TRP ALA LEU ASP LEU ASP ASP PHE ARG SEQRES 27 A 361 GLY THR PHE CYS GLY GLN ASN LEU ALA PHE PRO LEU THR SEQRES 28 A 361 ASN ALA ILE LYS ASP VAL LEU ALA ARG VAL MODRES 4S19 ASN A 39 ASN GLYCOSYLATION SITE HET NAG A 401 14 HET NAG A 402 15 HET MAN A 403 12 HETNAM NAG N-ACETYL-D-GLUCOSAMINE HETNAM MAN ALPHA-D-MANNOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 4 MAN C6 H12 O6 FORMUL 5 HOH *407(H2 O) HELIX 1 1 TRP A 10 ARG A 14 5 5 HELIX 2 2 GLU A 15 SER A 19 5 5 HELIX 3 3 PHE A 21 ILE A 25 5 5 HELIX 4 4 ASN A 51 ASN A 66 1 16 HELIX 5 5 ALA A 81 SER A 90 1 10 HELIX 6 6 LYS A 91 GLY A 110 1 20 HELIX 7 7 ASP A 125 GLN A 145 1 21 HELIX 8 8 GLY A 160 TYR A 168 1 9 HELIX 9 9 ASP A 169 LEU A 177 1 9 HELIX 10 10 GLY A 189 GLN A 193 5 5 HELIX 11 11 ASN A 215 LEU A 226 1 12 HELIX 12 12 PRO A 229 ASN A 231 5 3 HELIX 13 13 ALA A 274 LEU A 282 1 9 HELIX 14 14 ASP A 309 ARG A 323 1 15 HELIX 15 15 ALA A 332 ASP A 336 5 5 HELIX 16 16 PHE A 349 ARG A 361 1 13 SHEET 1 A10 GLU A 44 ASP A 46 0 SHEET 2 A10 HIS A 32 SER A 41 -1 N SER A 41 O GLU A 44 SHEET 3 A10 LYS A 70 GLY A 76 1 O LEU A 72 N TYR A 35 SHEET 4 A10 GLY A 113 ALA A 117 1 O ASP A 115 N VAL A 75 SHEET 5 A10 LEU A 152 PRO A 158 1 O SER A 154 N LEU A 116 SHEET 6 A10 PHE A 179 LEU A 183 1 O SER A 181 N ALA A 155 SHEET 7 A10 LEU A 233 PRO A 238 1 O VAL A 234 N LEU A 182 SHEET 8 A10 GLY A 327 TRP A 331 1 O MET A 329 N ILE A 237 SHEET 9 A10 LYS A 2 THR A 8 1 N ILE A 4 O ALA A 328 SHEET 10 A10 HIS A 32 SER A 41 1 O ILE A 34 N TYR A 7 SHEET 1 B 3 ILE A 257 PRO A 260 0 SHEET 2 B 3 GLY A 241 LEU A 246 -1 N THR A 245 O SER A 258 SHEET 3 B 3 ILE A 272 LEU A 273 -1 O LEU A 273 N GLY A 241 SHEET 1 C 5 ILE A 257 PRO A 260 0 SHEET 2 C 5 GLY A 241 LEU A 246 -1 N THR A 245 O SER A 258 SHEET 3 C 5 GLN A 303 ALA A 306 -1 O TRP A 304 N TYR A 244 SHEET 4 C 5 VAL A 295 LYS A 300 -1 N ALA A 298 O VAL A 305 SHEET 5 C 5 THR A 286 PHE A 290 -1 N THR A 286 O THR A 299 SSBOND 1 CYS A 5 CYS A 30 1555 1555 2.05 SSBOND 2 CYS A 279 CYS A 343 1555 1555 2.06 LINK ND2 ASN A 39 C1 NAG A 401 1555 1555 1.37 CISPEP 1 SER A 36 PHE A 37 0 -2.59 CISPEP 2 LEU A 119 TYR A 120 0 -6.42 CISPEP 3 TRP A 331 ALA A 332 0 4.52 SITE 1 AC1 8 ASN A 39 ILE A 40 SER A 41 ARG A 84 SITE 2 AC1 8 HOH A 605 HOH A 623 HOH A 778 HOH A 907 SITE 1 AC2 7 TRP A 78 LYS A 242 LYS A 270 MAN A 403 SITE 2 AC2 7 HOH A 609 HOH A 869 HOH A 871 SITE 1 AC3 7 PHE A 37 TRP A 78 LEU A 119 LEU A 183 SITE 2 AC3 7 TYR A 185 TRP A 331 NAG A 402 CRYST1 61.142 66.553 106.005 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016355 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015026 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009434 0.00000