HEADER TRANSFERASE 14-JAN-15 4S1O TITLE STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS NADD IN COMPLEX WITH NADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 3-200; COMPND 5 SYNONYM: DEAMIDO-NAD(+) DIPHOSPHORYLASE, DEAMIDO-NAD(+) COMPND 6 PYROPHOSPHORYLASE, NICOTINATE MONONUCLEOTIDE ADENYLYLTRANSFERASE; COMPND 7 EC: 2.7.7.18; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: LH57_13225, NADD, P425_02519, RV2421C, RVBD_2421C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSF-NT KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.V.KOROTKOV REVDAT 3 20-SEP-23 4S1O 1 REMARK SEQADV REVDAT 2 27-JAN-16 4S1O 1 REMARK REVDAT 1 20-JAN-16 4S1O 0 JRNL AUTH K.V.KOROTKOV JRNL TITL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1835 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2546 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 154 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2709 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.51000 REMARK 3 B22 (A**2) : 0.51000 REMARK 3 B33 (A**2) : -1.65000 REMARK 3 B12 (A**2) : 0.25000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.094 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.204 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2877 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2635 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3933 ; 1.611 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6040 ; 0.956 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 339 ; 5.904 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;32.322 ;22.240 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 424 ;11.855 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;16.064 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 441 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3153 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 679 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1377 ; 2.111 ; 2.785 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1376 ; 2.107 ; 2.782 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1709 ; 3.261 ; 4.143 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4S1O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000088067. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37134 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 47.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.01600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 3E27 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM NITRATE, 20% PEG3350, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.07000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.14000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 110.14000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.07000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 99.09000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 57.20964 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 55.07000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 99.09000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 57.20964 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 55.07000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 99.09000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 57.20964 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 55.07000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 1 REMARK 465 MET A 2 REMARK 465 GLY A 3 REMARK 465 TRP A 45 REMARK 465 GLN A 46 REMARK 465 LYS A 47 REMARK 465 GLY A 48 REMARK 465 ARG A 49 REMARK 465 GLN A 50 REMARK 465 GLU A 138 REMARK 465 LEU A 139 REMARK 465 ARG A 140 REMARK 465 ASN A 141 REMARK 465 GLU A 142 REMARK 465 HIS A 143 REMARK 465 ILE A 144 REMARK 465 THR A 145 REMARK 465 SER A 146 REMARK 465 LEU A 147 REMARK 465 LEU A 148 REMARK 465 GLY A 149 REMARK 465 GLN A 150 REMARK 465 LEU A 151 REMARK 465 ALA A 152 REMARK 465 LYS A 153 REMARK 465 GLY B 0 REMARK 465 ALA B 1 REMARK 465 MET B 2 REMARK 465 GLY B 3 REMARK 465 TRP B 45 REMARK 465 GLN B 46 REMARK 465 LYS B 47 REMARK 465 GLY B 48 REMARK 465 ARG B 49 REMARK 465 GLN B 50 REMARK 465 GLN B 118 REMARK 465 GLY B 119 REMARK 465 TYR B 137 REMARK 465 GLU B 138 REMARK 465 LEU B 139 REMARK 465 ARG B 140 REMARK 465 ASN B 141 REMARK 465 GLU B 142 REMARK 465 HIS B 143 REMARK 465 ILE B 144 REMARK 465 THR B 145 REMARK 465 SER B 146 REMARK 465 LEU B 147 REMARK 465 LEU B 148 REMARK 465 GLY B 149 REMARK 465 GLN B 150 REMARK 465 LEU B 151 REMARK 465 ALA B 152 REMARK 465 LYS B 153 REMARK 465 ASP B 154 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 183 -1.18 73.40 REMARK 500 GLN B 43 138.06 -30.08 REMARK 500 TYR B 183 -2.78 77.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RPI RELATED DB: PDB REMARK 900 RELATED ID: 4X0E RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHORS STATE THAT THE SEQUENCE IS MIS-ANNOTATED IN THE REMARK 999 DATABASES. THE CORRECT START SEQUENCE IS MHGRRLGVM WHICH WAS REMARK 999 CONFIRMED EXPERIMENTALLY. DBREF 4S1O A 9 200 UNP I6X474 I6X474_MYCTU 1 192 DBREF 4S1O B 9 200 UNP I6X474 I6X474_MYCTU 1 192 SEQADV 4S1O GLY A 0 UNP I6X474 EXPRESSION TAG SEQADV 4S1O ALA A 1 UNP I6X474 EXPRESSION TAG SEQADV 4S1O MET A 2 UNP I6X474 EXPRESSION TAG SEQADV 4S1O GLY A 3 UNP I6X474 SEE REMARK 999 SEQADV 4S1O ARG A 4 UNP I6X474 SEE REMARK 999 SEQADV 4S1O ARG A 5 UNP I6X474 SEE REMARK 999 SEQADV 4S1O LEU A 6 UNP I6X474 SEE REMARK 999 SEQADV 4S1O GLY A 7 UNP I6X474 SEE REMARK 999 SEQADV 4S1O VAL A 8 UNP I6X474 SEE REMARK 999 SEQADV 4S1O ARG A 196 UNP I6X474 CYS 188 ENGINEERED MUTATION SEQADV 4S1O THR A 200 UNP I6X474 CYS 192 ENGINEERED MUTATION SEQADV 4S1O GLY B 0 UNP I6X474 EXPRESSION TAG SEQADV 4S1O ALA B 1 UNP I6X474 EXPRESSION TAG SEQADV 4S1O MET B 2 UNP I6X474 EXPRESSION TAG SEQADV 4S1O GLY B 3 UNP I6X474 SEE REMARK 999 SEQADV 4S1O ARG B 4 UNP I6X474 SEE REMARK 999 SEQADV 4S1O ARG B 5 UNP I6X474 SEE REMARK 999 SEQADV 4S1O LEU B 6 UNP I6X474 SEE REMARK 999 SEQADV 4S1O GLY B 7 UNP I6X474 SEE REMARK 999 SEQADV 4S1O VAL B 8 UNP I6X474 SEE REMARK 999 SEQADV 4S1O ARG B 196 UNP I6X474 CYS 188 ENGINEERED MUTATION SEQADV 4S1O THR B 200 UNP I6X474 CYS 192 ENGINEERED MUTATION SEQRES 1 A 201 GLY ALA MET GLY ARG ARG LEU GLY VAL MET GLY GLY THR SEQRES 2 A 201 PHE ASP PRO ILE HIS TYR GLY HIS LEU VAL ALA ALA SER SEQRES 3 A 201 GLU VAL ALA ASP LEU PHE ASP LEU ASP GLU VAL VAL PHE SEQRES 4 A 201 VAL PRO SER GLY GLN PRO TRP GLN LYS GLY ARG GLN VAL SEQRES 5 A 201 SER ALA ALA GLU HIS ARG TYR LEU MET THR VAL ILE ALA SEQRES 6 A 201 THR ALA SER ASN PRO ARG PHE SER VAL SER ARG VAL ASP SEQRES 7 A 201 ILE ASP ARG GLY GLY PRO THR TYR THR LYS ASP THR LEU SEQRES 8 A 201 ALA ASP LEU HIS ALA LEU HIS PRO ASP SER GLU LEU TYR SEQRES 9 A 201 PHE THR THR GLY ALA ASP ALA LEU ALA SER ILE MET SER SEQRES 10 A 201 TRP GLN GLY TRP GLU GLU LEU PHE GLU LEU ALA ARG PHE SEQRES 11 A 201 VAL GLY VAL SER ARG PRO GLY TYR GLU LEU ARG ASN GLU SEQRES 12 A 201 HIS ILE THR SER LEU LEU GLY GLN LEU ALA LYS ASP ALA SEQRES 13 A 201 LEU THR LEU VAL GLU ILE PRO ALA LEU ALA ILE SER SER SEQRES 14 A 201 THR ASP CYS ARG GLN ARG ALA GLU GLN SER ARG PRO LEU SEQRES 15 A 201 TRP TYR LEU MET PRO ASP GLY VAL VAL GLN TYR VAL SER SEQRES 16 A 201 LYS ARG ARG LEU TYR THR SEQRES 1 B 201 GLY ALA MET GLY ARG ARG LEU GLY VAL MET GLY GLY THR SEQRES 2 B 201 PHE ASP PRO ILE HIS TYR GLY HIS LEU VAL ALA ALA SER SEQRES 3 B 201 GLU VAL ALA ASP LEU PHE ASP LEU ASP GLU VAL VAL PHE SEQRES 4 B 201 VAL PRO SER GLY GLN PRO TRP GLN LYS GLY ARG GLN VAL SEQRES 5 B 201 SER ALA ALA GLU HIS ARG TYR LEU MET THR VAL ILE ALA SEQRES 6 B 201 THR ALA SER ASN PRO ARG PHE SER VAL SER ARG VAL ASP SEQRES 7 B 201 ILE ASP ARG GLY GLY PRO THR TYR THR LYS ASP THR LEU SEQRES 8 B 201 ALA ASP LEU HIS ALA LEU HIS PRO ASP SER GLU LEU TYR SEQRES 9 B 201 PHE THR THR GLY ALA ASP ALA LEU ALA SER ILE MET SER SEQRES 10 B 201 TRP GLN GLY TRP GLU GLU LEU PHE GLU LEU ALA ARG PHE SEQRES 11 B 201 VAL GLY VAL SER ARG PRO GLY TYR GLU LEU ARG ASN GLU SEQRES 12 B 201 HIS ILE THR SER LEU LEU GLY GLN LEU ALA LYS ASP ALA SEQRES 13 B 201 LEU THR LEU VAL GLU ILE PRO ALA LEU ALA ILE SER SER SEQRES 14 B 201 THR ASP CYS ARG GLN ARG ALA GLU GLN SER ARG PRO LEU SEQRES 15 B 201 TRP TYR LEU MET PRO ASP GLY VAL VAL GLN TYR VAL SER SEQRES 16 B 201 LYS ARG ARG LEU TYR THR HET NAP A 301 48 HET CL A 302 1 HET NAP B 301 48 HET CL B 302 1 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM CL CHLORIDE ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 4 CL 2(CL 1-) FORMUL 7 HOH *240(H2 O) HELIX 1 1 HIS A 17 PHE A 31 1 15 HELIX 2 2 ALA A 53 ALA A 66 1 14 HELIX 3 3 ARG A 75 GLY A 81 1 7 HELIX 4 4 TYR A 85 HIS A 97 1 13 HELIX 5 5 ALA A 108 ALA A 112 1 5 HELIX 6 6 SER A 113 TRP A 117 5 5 HELIX 7 7 GLY A 119 LEU A 126 1 8 HELIX 8 8 PRO A 162 ILE A 166 5 5 HELIX 9 9 SER A 167 GLN A 177 1 11 HELIX 10 10 PRO A 186 ARG A 196 1 11 HELIX 11 11 HIS B 17 PHE B 31 1 15 HELIX 12 12 ALA B 53 ALA B 66 1 14 HELIX 13 13 ARG B 75 GLY B 81 1 7 HELIX 14 14 TYR B 85 HIS B 97 1 13 HELIX 15 15 ALA B 108 SER B 116 1 9 HELIX 16 16 GLU B 121 GLU B 125 1 5 HELIX 17 17 PRO B 162 ILE B 166 5 5 HELIX 18 18 SER B 167 GLN B 177 1 11 HELIX 19 19 PRO B 186 ARG B 196 1 11 SHEET 1 A 6 PHE A 71 VAL A 73 0 SHEET 2 A 6 GLU A 35 PRO A 40 1 N PHE A 38 O SER A 72 SHEET 3 A 6 ARG A 5 GLY A 11 1 N GLY A 7 O GLU A 35 SHEET 4 A 6 GLU A 101 GLY A 107 1 O THR A 105 N VAL A 8 SHEET 5 A 6 ALA A 127 SER A 133 1 O VAL A 130 N PHE A 104 SHEET 6 A 6 LEU A 156 GLU A 160 1 O THR A 157 N GLY A 131 SHEET 1 B 6 PHE B 71 VAL B 73 0 SHEET 2 B 6 GLU B 35 PRO B 40 1 N PHE B 38 O SER B 72 SHEET 3 B 6 ARG B 5 GLY B 11 1 N GLY B 7 O VAL B 37 SHEET 4 B 6 GLU B 101 GLY B 107 1 O THR B 105 N VAL B 8 SHEET 5 B 6 ARG B 128 SER B 133 1 O VAL B 130 N PHE B 104 SHEET 6 B 6 LEU B 156 GLU B 160 1 O THR B 157 N GLY B 131 CISPEP 1 ASP A 14 PRO A 15 0 2.97 CISPEP 2 ASP B 14 PRO B 15 0 5.35 SITE 1 AC1 30 MET A 9 GLY A 10 GLY A 11 THR A 12 SITE 2 AC1 30 HIS A 17 HIS A 20 THR A 84 TYR A 85 SITE 3 AC1 30 THR A 86 PHE A 104 THR A 106 GLY A 107 SITE 4 AC1 30 TRP A 117 GLN A 118 VAL A 132 SER A 167 SITE 5 AC1 30 SER A 168 HOH A 405 HOH A 408 HOH A 413 SITE 6 AC1 30 HOH A 418 HOH A 421 HOH A 422 HOH A 439 SITE 7 AC1 30 HOH A 442 HOH A 446 HOH A 463 HOH A 473 SITE 8 AC1 30 HOH A 489 HOH A 505 SITE 1 AC2 3 VAL A 73 HOH A 520 HOH B 416 SITE 1 AC3 28 MET B 9 GLY B 10 GLY B 11 THR B 12 SITE 2 AC3 28 HIS B 17 HIS B 20 SER B 41 THR B 84 SITE 3 AC3 28 TYR B 85 THR B 86 THR B 106 GLY B 107 SITE 4 AC3 28 ALA B 110 ILE B 114 TRP B 117 VAL B 132 SITE 5 AC3 28 SER B 167 SER B 168 HOH B 405 HOH B 424 SITE 6 AC3 28 HOH B 429 HOH B 432 HOH B 437 HOH B 455 SITE 7 AC3 28 HOH B 457 HOH B 458 HOH B 477 HOH B 492 SITE 1 AC4 2 VAL B 73 HOH B 440 CRYST1 66.060 66.060 165.210 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015138 0.008740 0.000000 0.00000 SCALE2 0.000000 0.017480 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006053 0.00000