HEADER LYASE 19-JAN-15 4S2A TITLE CRYSTAL STRUCTURE OF CAULOBACTER CRESCENTUS THIC WITH FE4S4 CLUSTER AT TITLE 2 REMOTE SITE (HOLO FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOMETHYLPYRIMIDINE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HYDROXYMETHYLPYRIMIDINE PHOSPHATE SYNTHASE, HMP-P SYNTHASE, COMPND 5 HMP-PHOSPHATE SYNTHASE, HMPP SYNTHASE, THIAMINE BIOSYNTHESIS PROTEIN COMPND 6 THIC; COMPND 7 EC: 4.1.99.17; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER CRESCENTUS CB15; SOURCE 3 ORGANISM_TAXID: 190650; SOURCE 4 STRAIN: ATCC 19089 / CB15; SOURCE 5 GENE: THIC, CC_2029; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS ALPHA-BETA BARREL, RADICAL SAM SUPERFAMILY, IRON-SULFUR CLUSTER, KEYWDS 2 THIAMIN, VITAMIN B1, VITAMIN B12, DOMAIN SWAPPING, ADOMET AND KEYWDS 3 GLUTAMATE MUTASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.K.FENWICK,A.P.MEHTA,Y.ZHANG,S.ABDELWAHED,T.P.BEGLEY,S.E.EALICK REVDAT 2 20-SEP-23 4S2A 1 REMARK SEQADV LINK REVDAT 1 08-APR-15 4S2A 0 JRNL AUTH M.K.FENWICK,A.P.MEHTA,Y.ZHANG,S.H.ABDELWAHED,T.P.BEGLEY, JRNL AUTH 2 S.E.EALICK JRNL TITL NON-CANONICAL ACTIVE SITE ARCHITECTURE OF THE RADICAL SAM JRNL TITL 2 THIAMIN PYRIMIDINE SYNTHASE. JRNL REF NAT COMMUN V. 6 6480 JRNL REFN ESSN 2041-1723 JRNL PMID 25813242 JRNL DOI 10.1038/NCOMMS7480 REMARK 2 REMARK 2 RESOLUTION. 2.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.5 REMARK 3 NUMBER OF REFLECTIONS : 13613 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 682 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5584 - 5.0086 0.90 2537 136 0.1839 0.2258 REMARK 3 2 5.0086 - 3.9762 0.94 2571 144 0.1583 0.1914 REMARK 3 3 3.9762 - 3.4738 0.93 2573 132 0.1880 0.2725 REMARK 3 4 3.4738 - 3.1563 0.95 2609 134 0.2148 0.2657 REMARK 3 5 3.1563 - 2.9300 0.96 2641 136 0.2669 0.3551 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4658 REMARK 3 ANGLE : 0.959 6338 REMARK 3 CHIRALITY : 0.023 690 REMARK 3 PLANARITY : 0.003 836 REMARK 3 DIHEDRAL : 10.699 1675 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: WEAK RESIDUAL ACTIVE SITE ELECTRON REMARK 3 DENSITY IS CONSISTENT WITH LOW OCCUPANCYHMP-P, WHICH WAS NOT REMARK 3 ADDED DURING CRYSTALLIZATION BUT WHICH COPURIFIES WITH THE REMARK 3 ENZYME. A PHOSPHATE WAS INCLUDED IN THE MODEL, BUT NOT THE REMARK 3 PYRIMIDINE REMARK 4 REMARK 4 4S2A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000088089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13613 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.930 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.15300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3EPN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 140 MM HEPES, PH 9.2, AND 7.5% (W/V) REMARK 280 PEG8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.32850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.46100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.32850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.46100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -136.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -49.25199 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 84.28467 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ILE A 3 REMARK 465 GLN A 4 REMARK 465 SER A 5 REMARK 465 THR A 6 REMARK 465 ILE A 7 REMARK 465 LYS A 8 REMARK 465 ALA A 9 REMARK 465 VAL A 10 REMARK 465 ALA A 11 REMARK 465 GLU A 12 REMARK 465 THR A 13 REMARK 465 ILE A 14 REMARK 465 SER A 223 REMARK 465 ALA A 224 REMARK 465 VAL A 225 REMARK 465 LEU A 226 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 ASN A 49 CG OD1 ND2 REMARK 470 GLN A 68 CG CD OE1 NE2 REMARK 470 ILE A 69 CG1 CG2 CD1 REMARK 470 GLU A 72 CG CD OE1 OE2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 GLN A 97 CG CD OE1 NE2 REMARK 470 GLN A 107 CG CD OE1 NE2 REMARK 470 GLU A 114 CG CD OE1 OE2 REMARK 470 VAL A 131 CG1 CG2 REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 GLN A 159 CG CD OE1 NE2 REMARK 470 ASP A 160 CG OD1 OD2 REMARK 470 ARG A 161 CG CD NE CZ NH1 NH2 REMARK 470 CYS A 163 SG REMARK 470 GLU A 361 CG CD OE1 OE2 REMARK 470 GLU A 398 CG CD OE1 OE2 REMARK 470 LYS A 479 CG CD CE NZ REMARK 470 LYS A 552 CG CD CE NZ REMARK 470 GLU A 553 CG CD OE1 OE2 REMARK 470 LYS A 556 CG CD CE NZ REMARK 470 LYS A 572 CG CD CE NZ REMARK 470 SER A 574 OG REMARK 470 GLU A 576 CG CD OE1 OE2 REMARK 470 ARG A 578 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 580 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 584 CG CD CE NZ REMARK 470 GLU A 590 CG CD OE1 OE2 REMARK 470 GLU A 606 CG CD OE1 OE2 REMARK 470 LYS A 610 CG CD CE NZ REMARK 470 GLU A 612 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 16 -149.69 -110.46 REMARK 500 PRO A 116 71.59 -67.18 REMARK 500 ASP A 117 34.74 -90.18 REMARK 500 VAL A 131 -44.32 -137.87 REMARK 500 SER A 173 58.62 -109.23 REMARK 500 PRO A 195 96.57 -60.18 REMARK 500 HIS A 200 72.90 -118.22 REMARK 500 LEU A 250 32.59 -86.42 REMARK 500 ASP A 374 62.73 -100.11 REMARK 500 PRO A 478 -70.17 -48.83 REMARK 500 HIS A 481 30.02 -89.36 REMARK 500 LEU A 482 -37.42 -133.72 REMARK 500 PRO A 511 92.18 -64.56 REMARK 500 ALA A 554 83.40 -151.32 REMARK 500 LYS A 567 76.31 53.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 700 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 561 SG REMARK 620 2 SF4 A 700 S2 105.7 REMARK 620 3 SF4 A 700 S3 119.6 99.6 REMARK 620 4 SF4 A 700 S4 125.6 99.7 101.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 700 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 564 SG REMARK 620 2 SF4 A 700 S1 113.6 REMARK 620 3 SF4 A 700 S3 116.3 103.0 REMARK 620 4 SF4 A 700 S4 117.9 100.2 103.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 A 700 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 569 SG REMARK 620 2 SF4 A 700 S1 119.8 REMARK 620 3 SF4 A 700 S2 117.3 104.1 REMARK 620 4 SF4 A 700 S4 112.5 99.9 100.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N7Q RELATED DB: PDB REMARK 900 RELATED ID: 3EPM RELATED DB: PDB REMARK 900 RELATED ID: 3EPN RELATED DB: PDB REMARK 900 RELATED ID: 3EPO RELATED DB: PDB REMARK 900 RELATED ID: 4S25 RELATED DB: PDB REMARK 900 RELATED ID: 4S26 RELATED DB: PDB REMARK 900 RELATED ID: 4S27 RELATED DB: PDB REMARK 900 RELATED ID: 4S28 RELATED DB: PDB REMARK 900 RELATED ID: 4S29 RELATED DB: PDB DBREF 4S2A A 1 612 UNP Q9A6Q5 THIC_CAUCR 1 612 SEQADV 4S2A GLY A -1 UNP Q9A6Q5 EXPRESSION TAG SEQADV 4S2A HIS A 0 UNP Q9A6Q5 EXPRESSION TAG SEQRES 1 A 614 GLY HIS MET ASN ILE GLN SER THR ILE LYS ALA VAL ALA SEQRES 2 A 614 GLU THR ILE SER THR GLY PRO ILE PRO GLY SER ARG LYS SEQRES 3 A 614 VAL TYR GLN ALA GLY GLU LEU PHE PRO GLU LEU ARG VAL SEQRES 4 A 614 PRO PHE ARG GLU VAL ALA VAL HIS PRO SER ALA ASN GLU SEQRES 5 A 614 PRO PRO VAL THR ILE TYR ASP PRO SER GLY PRO TYR SER SEQRES 6 A 614 ASP PRO ALA ILE GLN ILE ASP ILE GLU LYS GLY LEU PRO SEQRES 7 A 614 ARG THR ARG GLU ALA LEU VAL VAL ALA ARG GLY ASP VAL SEQRES 8 A 614 GLU GLU VAL ALA ASP PRO ARG GLN VAL LYS PRO GLU ASP SEQRES 9 A 614 ASN GLY PHE ALA GLN GLY LYS HIS LEU ALA PRO GLU PHE SEQRES 10 A 614 PRO ASP THR GLY ARG LYS ILE TYR ARG ALA LYS PRO GLY SEQRES 11 A 614 LYS LEU VAL THR GLN LEU GLU TYR ALA ARG ALA GLY ILE SEQRES 12 A 614 ILE THR ALA GLU MET GLU TYR VAL ALA ILE ARG GLU ASN SEQRES 13 A 614 LEU ARG ARG GLU GLN ASP ARG PRO CYS VAL ARG ASP GLY SEQRES 14 A 614 GLU ASP PHE GLY ALA SER ILE PRO ASP PHE VAL THR PRO SEQRES 15 A 614 GLU PHE VAL ARG GLN GLU ILE ALA ARG GLY ARG ALA ILE SEQRES 16 A 614 ILE PRO ALA ASN ILE ASN HIS GLY GLU LEU GLU PRO MET SEQRES 17 A 614 ALA ILE GLY ARG ASN PHE LEU VAL LYS ILE ASN ALA ASN SEQRES 18 A 614 ILE GLY ASN SER ALA VAL LEU SER THR VAL ALA ASP GLU SEQRES 19 A 614 VAL ASP LYS LEU VAL TRP ALA THR ARG TRP GLY ALA ASP SEQRES 20 A 614 THR VAL MET ASP LEU SER THR GLY ARG ASN ILE HIS ASN SEQRES 21 A 614 ILE ARG ASP TRP ILE ILE ARG ASN SER SER VAL PRO ILE SEQRES 22 A 614 GLY THR VAL PRO ILE TYR GLN ALA LEU GLU LYS VAL ASN SEQRES 23 A 614 GLY VAL ALA GLU ASP LEU ASN TRP GLU VAL PHE ARG ASP SEQRES 24 A 614 THR LEU ILE GLU GLN CYS GLU GLN GLY VAL ASP TYR PHE SEQRES 25 A 614 THR ILE HIS ALA GLY VAL ARG LEU PRO PHE ILE PRO MET SEQRES 26 A 614 THR ALA LYS ARG VAL THR GLY ILE VAL SER ARG GLY GLY SEQRES 27 A 614 SER ILE MET ALA LYS TRP CYS LEU ALA HIS HIS LYS GLU SEQRES 28 A 614 ASN PHE LEU TYR GLU ARG PHE ASP GLU ILE CYS GLU ILE SEQRES 29 A 614 MET ARG ALA TYR ASP VAL SER PHE SER LEU GLY ASP GLY SEQRES 30 A 614 LEU ARG PRO GLY SER THR ALA ASP ALA ASN ASP GLU ALA SEQRES 31 A 614 GLN PHE SER GLU LEU ARG THR LEU GLY GLU LEU THR LYS SEQRES 32 A 614 VAL ALA TRP LYS HIS GLY VAL GLN VAL MET ILE GLU GLY SEQRES 33 A 614 PRO GLY HIS VAL ALA MET HIS LYS ILE LYS ALA ASN MET SEQRES 34 A 614 ASP GLU GLN LEU LYS HIS CYS HIS GLU ALA PRO PHE TYR SEQRES 35 A 614 THR LEU GLY PRO LEU THR THR ASP ILE ALA PRO GLY TYR SEQRES 36 A 614 ASP HIS ILE THR SER ALA ILE GLY ALA ALA MET ILE GLY SEQRES 37 A 614 TRP PHE GLY THR ALA MET LEU CYS TYR VAL THR PRO LYS SEQRES 38 A 614 GLU HIS LEU GLY LEU PRO ASP ARG ASP ASP VAL LYS THR SEQRES 39 A 614 GLY VAL ILE THR TYR LYS LEU ALA ALA HIS ALA ALA ASP SEQRES 40 A 614 LEU ALA LYS GLY HIS PRO GLY ALA ALA MET TRP ASP ASP SEQRES 41 A 614 ALA ILE SER ARG ALA ARG PHE GLU PHE ARG TRP GLU ASP SEQRES 42 A 614 GLN PHE ASN LEU GLY LEU ASP PRO GLU THR ALA ARG LYS SEQRES 43 A 614 PHE HIS ASP GLU THR LEU PRO LYS GLU ALA HIS LYS THR SEQRES 44 A 614 ALA HIS PHE CYS SER MET CYS GLY PRO LYS PHE CYS SER SEQRES 45 A 614 MET LYS ILE SER GLN GLU VAL ARG ASP PHE ALA ALA GLY SEQRES 46 A 614 LYS ALA PRO ASN SER ALA GLU LEU GLY MET ALA GLU MET SEQRES 47 A 614 SER GLU LYS PHE ARG GLU GLN GLY SER GLU ILE TYR LEU SEQRES 48 A 614 LYS THR GLU HET SF4 A 700 8 HET PO4 A 701 5 HETNAM SF4 IRON/SULFUR CLUSTER HETNAM PO4 PHOSPHATE ION FORMUL 2 SF4 FE4 S4 FORMUL 3 PO4 O4 P 3- HELIX 1 1 HIS A 45 ASN A 49 5 5 HELIX 2 2 SER A 59 SER A 63 5 5 HELIX 3 3 ARG A 79 ARG A 86 1 8 HELIX 4 4 LYS A 99 GLY A 104 5 6 HELIX 5 5 GLN A 107 LEU A 111 5 5 HELIX 6 6 THR A 132 ARG A 138 1 7 HELIX 7 7 THR A 143 ASN A 154 1 12 HELIX 8 8 THR A 179 ARG A 189 1 11 HELIX 9 9 THR A 228 TRP A 242 1 15 HELIX 10 10 ASN A 255 ASN A 266 1 12 HELIX 11 11 VAL A 274 VAL A 283 1 10 HELIX 12 12 VAL A 286 LEU A 290 5 5 HELIX 13 13 ASN A 291 GLU A 304 1 14 HELIX 14 14 ARG A 317 ALA A 325 5 9 HELIX 15 15 SER A 333 HIS A 347 1 15 HELIX 16 16 ASN A 350 ARG A 355 1 6 HELIX 17 17 ARG A 355 ASP A 367 1 13 HELIX 18 18 ASP A 386 LYS A 405 1 20 HELIX 19 19 ALA A 419 CYS A 434 1 16 HELIX 20 20 TYR A 453 GLY A 469 1 17 HELIX 21 21 ASP A 486 GLY A 509 1 24 HELIX 22 22 ALA A 513 GLU A 526 1 14 HELIX 23 23 ARG A 528 LEU A 535 1 8 HELIX 24 24 ASP A 538 ARG A 543 1 6 HELIX 25 25 LYS A 544 HIS A 546 5 3 HELIX 26 26 CYS A 561 CYS A 564 5 4 HELIX 27 27 LYS A 567 VAL A 577 1 11 HELIX 28 28 ALA A 589 GLN A 603 1 15 SHEET 1 A 3 ARG A 23 ALA A 28 0 SHEET 2 A 3 ARG A 36 VAL A 42 -1 O PHE A 39 N VAL A 25 SHEET 3 A 3 VAL A 53 TYR A 56 -1 O VAL A 53 N VAL A 42 SHEET 1 B 2 VAL A 89 GLU A 91 0 SHEET 2 B 2 TYR A 123 ALA A 125 -1 O ARG A 124 N GLU A 90 SHEET 1 C 2 ALA A 192 ILE A 193 0 SHEET 2 C 2 ILE A 208 GLY A 209 -1 O ILE A 208 N ILE A 193 SHEET 1 D 9 LYS A 215 ILE A 220 0 SHEET 2 D 9 THR A 246 ASP A 249 1 O MET A 248 N ILE A 220 SHEET 3 D 9 ILE A 271 THR A 273 1 O GLY A 272 N ASP A 249 SHEET 4 D 9 TYR A 309 ILE A 312 1 O THR A 311 N THR A 273 SHEET 5 D 9 SER A 369 LEU A 372 1 O SER A 371 N PHE A 310 SHEET 6 D 9 VAL A 410 GLY A 414 1 O GLU A 413 N LEU A 372 SHEET 7 D 9 PHE A 439 LEU A 442 1 O TYR A 440 N GLY A 414 SHEET 8 D 9 MET A 472 CYS A 474 1 O CYS A 474 N THR A 441 SHEET 9 D 9 LYS A 215 ILE A 220 1 N LYS A 215 O LEU A 473 SHEET 1 E 2 THR A 557 HIS A 559 0 SHEET 2 E 2 TYR A 608 LYS A 610 -1 O LEU A 609 N ALA A 558 LINK SG CYS A 561 FE1 SF4 A 700 1555 1555 2.27 LINK SG CYS A 564 FE2 SF4 A 700 1555 1555 2.27 LINK SG CYS A 569 FE3 SF4 A 700 1555 1555 2.27 CISPEP 1 PRO A 415 GLY A 416 0 2.47 CISPEP 2 GLY A 443 PRO A 444 0 4.55 SITE 1 AC1 6 PRO A 322 HIS A 347 CYS A 561 CYS A 564 SITE 2 AC1 6 PHE A 568 CYS A 569 SITE 1 AC2 7 TYR A 277 HIS A 313 SER A 333 ARG A 334 SITE 2 AC2 7 GLY A 335 ASP A 374 ARG A 377 CRYST1 116.657 68.922 97.620 90.00 120.30 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008572 0.000000 0.005009 0.00000 SCALE2 0.000000 0.014509 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011865 0.00000