HEADER HYDROLASE/ANTIBIOTIC 21-JAN-15 4S2O TITLE OXA-10 IN COMPLEX WITH AVIBACTAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE OXA-10; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-LACTAMASE PSE-2; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BLA, OXA10, PSE2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE-ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.T.KING,N.C.J.STRYNADKA REVDAT 4 22-NOV-17 4S2O 1 REMARK REVDAT 3 28-SEP-16 4S2O 1 JRNL REVDAT 2 03-JUN-15 4S2O 1 HETSYN REVDAT 1 25-FEB-15 4S2O 0 JRNL AUTH D.T.KING,A.M.KING,S.M.LAL,G.D.WRIGHT,N.C.STRYNADKA JRNL TITL MOLECULAR MECHANISM OF AVIBACTAM-MEDIATED BETA-LACTAMASE JRNL TITL 2 INHIBITION. JRNL REF ACS INFECT DIS V. 1 175 2015 JRNL REFN ESSN 2373-8227 JRNL PMID 27622530 JRNL DOI 10.1021/ACSINFECDIS.5B00007 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 61211 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3223 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4597 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.1410 REMARK 3 BIN FREE R VALUE SET COUNT : 240 REMARK 3 BIN FREE R VALUE : 0.2080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3876 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 438 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29000 REMARK 3 B22 (A**2) : 0.91000 REMARK 3 B33 (A**2) : -0.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.239 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.904 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4049 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3865 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5482 ; 1.738 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8923 ; 1.179 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 501 ; 5.958 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;37.004 ;25.281 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 724 ;15.931 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;15.895 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 600 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4608 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 919 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1998 ; 4.302 ; 1.778 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1996 ; 4.281 ; 1.775 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2501 ; 4.921 ; 2.655 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2501 ; 4.895 ; 2.655 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2051 ; 5.437 ; 2.219 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2052 ; 5.436 ; 2.219 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2982 ; 6.098 ; 3.155 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5172 ; 6.246 ;16.686 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4949 ; 6.075 ;15.991 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7914 ; 6.160 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 153 ;28.165 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 8141 ;12.648 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 21 264 B 21 264 14888 0.13 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 31 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7317 5.1685 -17.3468 REMARK 3 T TENSOR REMARK 3 T11: 0.1391 T22: 0.1148 REMARK 3 T33: 0.1472 T12: -0.0099 REMARK 3 T13: -0.0023 T23: 0.0944 REMARK 3 L TENSOR REMARK 3 L11: 12.6457 L22: 3.3939 REMARK 3 L33: 4.2215 L12: -1.9075 REMARK 3 L13: 7.1165 L23: -0.2561 REMARK 3 S TENSOR REMARK 3 S11: -0.2481 S12: 0.3445 S13: 1.1074 REMARK 3 S21: -0.3959 S22: -0.3328 S23: -0.3256 REMARK 3 S31: -0.2647 S32: 0.1240 S33: 0.5809 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3681 -10.8979 0.7370 REMARK 3 T TENSOR REMARK 3 T11: 0.0401 T22: 0.0353 REMARK 3 T33: 0.0119 T12: 0.0003 REMARK 3 T13: -0.0011 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.3109 L22: 0.2930 REMARK 3 L33: 0.6362 L12: -0.1330 REMARK 3 L13: -0.0284 L23: -0.0836 REMARK 3 S TENSOR REMARK 3 S11: -0.0344 S12: 0.0080 S13: 0.0203 REMARK 3 S21: 0.0068 S22: 0.0179 S23: 0.0067 REMARK 3 S31: -0.0479 S32: -0.0139 S33: 0.0166 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 265 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6292 -1.8151 -5.5439 REMARK 3 T TENSOR REMARK 3 T11: 0.0770 T22: 0.0398 REMARK 3 T33: 0.0445 T12: -0.0291 REMARK 3 T13: -0.0243 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 1.5885 L22: 2.0045 REMARK 3 L33: 1.0795 L12: -1.7311 REMARK 3 L13: -0.0814 L23: 0.2106 REMARK 3 S TENSOR REMARK 3 S11: -0.0398 S12: 0.0550 S13: 0.2019 REMARK 3 S21: 0.0302 S22: 0.0030 S23: -0.2197 REMARK 3 S31: -0.1789 S32: 0.1267 S33: 0.0368 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 20 B 94 REMARK 3 ORIGIN FOR THE GROUP (A): 12.4368 8.9271 27.3975 REMARK 3 T TENSOR REMARK 3 T11: 0.0324 T22: 0.0433 REMARK 3 T33: 0.0836 T12: -0.0148 REMARK 3 T13: 0.0191 T23: -0.0503 REMARK 3 L TENSOR REMARK 3 L11: 0.2455 L22: 0.6480 REMARK 3 L33: 1.7525 L12: 0.0521 REMARK 3 L13: -0.0099 L23: 0.5446 REMARK 3 S TENSOR REMARK 3 S11: 0.0425 S12: -0.0853 S13: 0.1408 REMARK 3 S21: -0.0150 S22: -0.0576 S23: 0.0601 REMARK 3 S31: -0.0686 S32: 0.0702 S33: 0.0151 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 95 B 118 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5321 21.2752 11.5358 REMARK 3 T TENSOR REMARK 3 T11: 0.2828 T22: 0.0782 REMARK 3 T33: 0.2952 T12: 0.0045 REMARK 3 T13: -0.0279 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 1.3208 L22: 7.6425 REMARK 3 L33: 4.5916 L12: -1.4032 REMARK 3 L13: 1.4176 L23: 0.7507 REMARK 3 S TENSOR REMARK 3 S11: -0.1653 S12: 0.0631 S13: 0.5799 REMARK 3 S21: -0.1597 S22: -0.1855 S23: -0.6419 REMARK 3 S31: -0.6295 S32: 0.2390 S33: 0.3508 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4S2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-15. REMARK 100 THE DEPOSITION ID IS D_1000088103. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 (DCM) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64493 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 52.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M (NH4)2SO4, 0.1 M MES PH 6.5, 10 REMARK 280 MM COCL2, 2MM AVIBACTAM, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.30000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.85000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.25000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.85000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.30000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.25000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN BEHAVES AS A DIMER IN SOLUTION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 46 -44.62 73.77 REMARK 500 ALA A 66 -138.77 50.65 REMARK 500 LYS A 152 5.68 -151.08 REMARK 500 GLU A 229 -120.92 71.51 REMARK 500 ALA B 66 -136.36 48.71 REMARK 500 LYS B 152 11.75 -158.43 REMARK 500 GLU B 229 -132.41 57.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 302 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 414 O REMARK 620 2 GLU B 190 OE2 88.3 REMARK 620 3 HOH B 519 O 84.6 84.1 REMARK 620 4 GLU A 227 OE2 149.5 119.4 85.8 REMARK 620 5 GLU A 227 OE1 89.1 177.2 94.5 62.9 REMARK 620 6 HIS A 203 NE2 97.9 91.5 174.9 94.2 90.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 301 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 190 OE2 REMARK 620 2 HOH A 539 O 82.6 REMARK 620 3 HOH A 443 O 92.0 88.9 REMARK 620 4 GLU B 227 OE1 172.0 90.4 91.8 REMARK 620 5 GLU B 227 OE2 114.0 83.8 151.8 61.1 REMARK 620 6 HIS B 203 NE2 95.2 174.5 96.2 91.4 92.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NXL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NXL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 303 DBREF 4S2O A 20 265 UNP P14489 BLO10_PSEAI 20 265 DBREF 4S2O B 20 265 UNP P14489 BLO10_PSEAI 20 265 SEQRES 1 A 246 GLY SER ILE THR GLU ASN THR SER TRP ASN LYS GLU PHE SEQRES 2 A 246 SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS LYS SEQRES 3 A 246 SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA ARG SEQRES 4 A 246 ALA SER LYS GLU TYR LEU PRO ALA SER THR PHE LYS ILE SEQRES 5 A 246 PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE LYS SEQRES 6 A 246 ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO ARG SEQRES 7 A 246 ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG GLY SEQRES 8 A 246 ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN ILE SEQRES 9 A 246 ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR LEU SEQRES 10 A 246 LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY GLY SEQRES 11 A 246 ILE ASP LYS PHE TRP LEU GLU GLY GLN LEU ARG ILE SER SEQRES 12 A 246 ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR LEU SEQRES 13 A 246 ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE VAL SEQRES 14 A 246 LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR LEU SEQRES 15 A 246 VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR GLU SEQRES 16 A 246 SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL GLU SEQRES 17 A 246 LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET ASP SEQRES 18 A 246 ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER ILE SEQRES 19 A 246 PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY SEQRES 1 B 246 GLY SER ILE THR GLU ASN THR SER TRP ASN LYS GLU PHE SEQRES 2 B 246 SER ALA GLU ALA VAL ASN GLY VAL PHE VAL LEU CYS LYS SEQRES 3 B 246 SER SER SER LYS SER CYS ALA THR ASN ASP LEU ALA ARG SEQRES 4 B 246 ALA SER LYS GLU TYR LEU PRO ALA SER THR PHE LYS ILE SEQRES 5 B 246 PRO ASN ALA ILE ILE GLY LEU GLU THR GLY VAL ILE LYS SEQRES 6 B 246 ASN GLU HIS GLN VAL PHE LYS TRP ASP GLY LYS PRO ARG SEQRES 7 B 246 ALA MET LYS GLN TRP GLU ARG ASP LEU THR LEU ARG GLY SEQRES 8 B 246 ALA ILE GLN VAL SER ALA VAL PRO VAL PHE GLN GLN ILE SEQRES 9 B 246 ALA ARG GLU VAL GLY GLU VAL ARG MET GLN LYS TYR LEU SEQRES 10 B 246 LYS LYS PHE SER TYR GLY ASN GLN ASN ILE SER GLY GLY SEQRES 11 B 246 ILE ASP LYS PHE TRP LEU GLU GLY GLN LEU ARG ILE SER SEQRES 12 B 246 ALA VAL ASN GLN VAL GLU PHE LEU GLU SER LEU TYR LEU SEQRES 13 B 246 ASN LYS LEU SER ALA SER LYS GLU ASN GLN LEU ILE VAL SEQRES 14 B 246 LYS GLU ALA LEU VAL THR GLU ALA ALA PRO GLU TYR LEU SEQRES 15 B 246 VAL HIS SER LYS THR GLY PHE SER GLY VAL GLY THR GLU SEQRES 16 B 246 SER ASN PRO GLY VAL ALA TRP TRP VAL GLY TRP VAL GLU SEQRES 17 B 246 LYS GLU THR GLU VAL TYR PHE PHE ALA PHE ASN MET ASP SEQRES 18 B 246 ILE ASP ASN GLU SER LYS LEU PRO LEU ARG LYS SER ILE SEQRES 19 B 246 PRO THR LYS ILE MET GLU SER GLU GLY ILE ILE GLY HET NXL A 301 17 HET CO A 302 1 HET CO A 303 1 HET CO B 301 1 HET NXL B 302 17 HET CO B 303 1 HETNAM NXL (2S,5R)-1-FORMYL-5-[(SULFOOXY)AMINO]PIPERIDINE-2- HETNAM 2 NXL CARBOXAMIDE HETNAM CO COBALT (II) ION HETSYN NXL AVIBACTAM, BOUND FORM, NXL104, BOUND FORM FORMUL 3 NXL 2(C7 H13 N3 O6 S) FORMUL 4 CO 4(CO 2+) FORMUL 9 HOH *438(H2 O) HELIX 1 1 TRP A 28 ALA A 34 1 7 HELIX 2 2 ASP A 55 SER A 60 1 6 HELIX 3 3 PRO A 65 THR A 68 5 4 HELIX 4 4 PHE A 69 THR A 80 1 12 HELIX 5 5 MET A 99 GLU A 103 5 5 HELIX 6 6 LEU A 108 VAL A 114 1 7 HELIX 7 7 ALA A 116 PHE A 139 1 24 HELIX 8 8 LYS A 152 GLY A 157 1 6 HELIX 9 9 ALA A 163 LEU A 175 1 13 HELIX 10 10 SER A 181 LEU A 192 1 12 HELIX 11 11 ASN A 243 LEU A 247 5 5 HELIX 12 12 PRO A 248 GLU A 261 1 14 HELIX 13 13 TRP B 28 ALA B 34 1 7 HELIX 14 14 ASP B 55 LYS B 61 1 7 HELIX 15 15 PRO B 65 THR B 68 5 4 HELIX 16 16 PHE B 69 THR B 80 1 12 HELIX 17 17 MET B 99 GLU B 103 5 5 HELIX 18 18 THR B 107 VAL B 114 1 8 HELIX 19 19 ALA B 116 GLY B 128 1 13 HELIX 20 20 GLY B 128 PHE B 139 1 12 HELIX 21 21 ALA B 163 LEU B 175 1 13 HELIX 22 22 SER B 181 LEU B 192 1 12 HELIX 23 23 ASN B 243 LEU B 247 5 5 HELIX 24 24 PRO B 248 GLU B 261 1 14 SHEET 1 A 7 ILE A 22 GLU A 24 0 SHEET 2 A 7 CYS A 51 THR A 53 1 O CYS A 51 N THR A 23 SHEET 3 A 7 GLY A 39 LYS A 45 -1 N LEU A 43 O ALA A 52 SHEET 4 A 7 GLU A 231 ILE A 241 -1 O ASN A 238 N VAL A 40 SHEET 5 A 7 GLY A 218 LYS A 228 -1 N LYS A 228 O GLU A 231 SHEET 6 A 7 TYR A 200 PHE A 208 -1 N LEU A 201 O GLU A 227 SHEET 7 A 7 VAL A 193 ALA A 197 -1 N GLU A 195 O VAL A 202 SHEET 1 B 2 GLU A 62 TYR A 63 0 SHEET 2 B 2 ILE A 161 SER A 162 -1 O ILE A 161 N TYR A 63 SHEET 1 C 2 VAL A 89 PHE A 90 0 SHEET 2 C 2 LEU A 106 THR A 107 -1 O LEU A 106 N PHE A 90 SHEET 1 D 7 SER B 21 GLU B 24 0 SHEET 2 D 7 SER B 50 THR B 53 1 O CYS B 51 N SER B 21 SHEET 3 D 7 GLY B 39 LYS B 45 -1 N LEU B 43 O ALA B 52 SHEET 4 D 7 GLU B 231 ILE B 241 -1 O PHE B 234 N CYS B 44 SHEET 5 D 7 GLY B 218 LYS B 228 -1 N GLY B 224 O PHE B 235 SHEET 6 D 7 TYR B 200 PHE B 208 -1 N LEU B 201 O GLU B 227 SHEET 7 D 7 VAL B 193 ALA B 197 -1 N GLU B 195 O VAL B 202 SHEET 1 E 2 GLU B 62 TYR B 63 0 SHEET 2 E 2 ILE B 161 SER B 162 -1 O ILE B 161 N TYR B 63 SSBOND 1 CYS A 44 CYS A 51 1555 1555 2.06 SSBOND 2 CYS B 44 CYS B 51 1555 1555 2.07 LINK CO CO A 302 O HOH B 414 1555 1555 1.82 LINK OE2 GLU B 190 CO CO A 302 1555 1555 1.85 LINK OE2 GLU A 190 CO CO B 301 1555 1555 2.05 LINK CO CO B 301 O HOH A 539 1555 1555 2.07 LINK CO CO A 302 O HOH B 519 1555 1555 2.09 LINK CO CO B 301 O HOH A 443 1555 1555 2.09 LINK OE2 GLU A 227 CO CO A 302 1555 1555 2.10 LINK OE1 GLU B 227 CO CO B 301 1555 1555 2.11 LINK OE1 GLU A 227 CO CO A 302 1555 1555 2.15 LINK OE2 GLU B 227 CO CO B 301 1555 1555 2.21 LINK NE2 HIS A 203 CO CO A 302 1555 1555 2.22 LINK NE2 HIS B 203 CO CO B 301 1555 1555 2.22 LINK OG SER A 67 CAN NXL A 301 1555 1555 1.37 LINK OG SER B 67 CAN NXL B 302 1555 1555 1.34 SITE 1 AC1 13 ALA A 66 SER A 67 MET A 99 SER A 115 SITE 2 AC1 13 VAL A 117 LYS A 205 THR A 206 GLY A 207 SITE 3 AC1 13 PHE A 208 ARG A 250 HOH A 473 HOH A 589 SITE 4 AC1 13 HOH A 659 SITE 1 AC2 5 HIS A 203 GLU A 227 GLU B 190 HOH B 414 SITE 2 AC2 5 HOH B 519 SITE 1 AC3 1 ARG A 58 SITE 1 AC4 5 GLU A 190 HOH A 443 HOH A 539 HIS B 203 SITE 2 AC4 5 GLU B 227 SITE 1 AC5 12 ALA B 66 SER B 67 TRP B 102 SER B 115 SITE 2 AC5 12 VAL B 117 LEU B 155 LYS B 205 THR B 206 SITE 3 AC5 12 GLY B 207 PHE B 208 ARG B 250 HOH B 483 SITE 1 AC6 1 ARG B 131 CRYST1 48.600 96.500 125.700 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020576 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010363 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007955 0.00000