HEADER HYDROLASE 23-JAN-15 4S2W TITLE STRUCTURE OF E. COLI RPPH BOUND TO SULFATE IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA PYROPHOSPHOHYDROLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: (DI)NUCLEOSIDE POLYPHOSPHATE HYDROLASE, AP5A COMPND 5 PYROPHOSPHATASE; COMPND 6 EC: 3.6.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: RPPH, NUDH, YGDP, B2830, JW2798; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUDIX HYDROLASE, RNA PYROPHOSPHOHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.VASILYEV,A.SERGANOV REVDAT 4 28-FEB-24 4S2W 1 REMARK SEQADV REVDAT 3 06-MAY-15 4S2W 1 JRNL REVDAT 2 25-FEB-15 4S2W 1 JRNL REVDAT 1 11-FEB-15 4S2W 0 JRNL AUTH N.VASILYEV,A.SERGANOV JRNL TITL STRUCTURES OF RNA COMPLEXES WITH THE ESCHERICHIA COLI RNA JRNL TITL 2 PYROPHOSPHOHYDROLASE RPPH UNVEIL THE BASIS FOR SPECIFIC JRNL TITL 3 5'-END-DEPENDENT MRNA DECAY. JRNL REF J.BIOL.CHEM. V. 290 9487 2015 JRNL REFN ISSN 0021-9258 JRNL PMID 25657011 JRNL DOI 10.1074/JBC.M114.634824 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 10977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.4264 - 3.1581 0.97 2773 146 0.1518 0.1957 REMARK 3 2 3.1581 - 2.5084 0.95 2667 141 0.1864 0.2268 REMARK 3 3 2.5084 - 2.1918 0.93 2575 135 0.1917 0.2327 REMARK 3 4 2.1918 - 1.9916 0.87 2413 127 0.2030 0.2715 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1328 REMARK 3 ANGLE : 1.098 1804 REMARK 3 CHIRALITY : 0.042 182 REMARK 3 PLANARITY : 0.006 228 REMARK 3 DIHEDRAL : 13.032 473 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4214 7.1281 17.3967 REMARK 3 T TENSOR REMARK 3 T11: 0.4363 T22: 0.3402 REMARK 3 T33: 0.3805 T12: -0.0776 REMARK 3 T13: -0.0441 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 7.7129 L22: 3.7167 REMARK 3 L33: 5.5446 L12: 3.8471 REMARK 3 L13: 4.2884 L23: 2.4142 REMARK 3 S TENSOR REMARK 3 S11: 0.2165 S12: -0.2801 S13: 0.6691 REMARK 3 S21: 0.7768 S22: -0.2486 S23: -0.1110 REMARK 3 S31: -0.1581 S32: 0.3495 S33: -0.0013 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0084 -8.6495 8.8145 REMARK 3 T TENSOR REMARK 3 T11: 0.2609 T22: 0.2315 REMARK 3 T33: 0.2433 T12: -0.0677 REMARK 3 T13: 0.0095 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 1.3801 L22: 1.9770 REMARK 3 L33: 2.8067 L12: -1.4865 REMARK 3 L13: 0.4157 L23: -0.6927 REMARK 3 S TENSOR REMARK 3 S11: -0.1101 S12: -0.4878 S13: 0.2004 REMARK 3 S21: 0.1152 S22: 0.1179 S23: 0.0412 REMARK 3 S31: 0.2121 S32: -0.2764 S33: -0.0245 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6799 7.6071 5.8513 REMARK 3 T TENSOR REMARK 3 T11: 0.2292 T22: 0.1738 REMARK 3 T33: 0.2227 T12: -0.0020 REMARK 3 T13: 0.0045 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 2.6460 L22: 2.3307 REMARK 3 L33: 2.2976 L12: -0.3567 REMARK 3 L13: 0.0135 L23: 0.4567 REMARK 3 S TENSOR REMARK 3 S11: 0.1432 S12: -0.0872 S13: 0.1660 REMARK 3 S21: 0.0205 S22: -0.1742 S23: -0.0530 REMARK 3 S31: -0.2059 S32: -0.1602 S33: 0.0237 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0779 6.2025 22.8574 REMARK 3 T TENSOR REMARK 3 T11: 0.7548 T22: 0.5970 REMARK 3 T33: 0.3375 T12: 0.0784 REMARK 3 T13: 0.0131 T23: -0.0441 REMARK 3 L TENSOR REMARK 3 L11: 2.3250 L22: 1.8185 REMARK 3 L33: 3.8573 L12: 1.4371 REMARK 3 L13: 1.4371 L23: 0.4933 REMARK 3 S TENSOR REMARK 3 S11: 0.1373 S12: -1.0873 S13: 0.3010 REMARK 3 S21: 0.2354 S22: -0.4225 S23: -0.0230 REMARK 3 S31: -1.1911 S32: -0.8117 S33: 0.0174 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.3747 1.3123 23.5542 REMARK 3 T TENSOR REMARK 3 T11: 0.3798 T22: 0.6742 REMARK 3 T33: 0.6005 T12: -0.0600 REMARK 3 T13: -0.1464 T23: 0.1602 REMARK 3 L TENSOR REMARK 3 L11: 3.5506 L22: 8.2409 REMARK 3 L33: 3.5902 L12: 3.3382 REMARK 3 L13: 0.1604 L23: 0.9614 REMARK 3 S TENSOR REMARK 3 S11: -0.5373 S12: 0.6708 S13: -0.0634 REMARK 3 S21: -0.0413 S22: 0.1735 S23: -0.8794 REMARK 3 S31: -0.4657 S32: 0.8127 S33: 0.1242 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4176 -3.7797 7.9874 REMARK 3 T TENSOR REMARK 3 T11: 0.1927 T22: 0.2218 REMARK 3 T33: 0.2033 T12: -0.0615 REMARK 3 T13: -0.0074 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 1.4793 L22: 2.0124 REMARK 3 L33: 1.8241 L12: -0.3057 REMARK 3 L13: 0.0806 L23: 0.3464 REMARK 3 S TENSOR REMARK 3 S11: 0.0173 S12: -0.2636 S13: -0.0891 REMARK 3 S21: 0.1942 S22: -0.0860 S23: -0.0134 REMARK 3 S31: 0.0679 S32: -0.1497 S33: 0.0072 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4004 -3.0997 18.9085 REMARK 3 T TENSOR REMARK 3 T11: 0.3310 T22: 0.6712 REMARK 3 T33: 0.3285 T12: -0.1211 REMARK 3 T13: 0.0508 T23: 0.1065 REMARK 3 L TENSOR REMARK 3 L11: 5.6504 L22: 2.2395 REMARK 3 L33: 1.8354 L12: -1.0049 REMARK 3 L13: 0.8259 L23: -0.7611 REMARK 3 S TENSOR REMARK 3 S11: 0.1752 S12: -0.9243 S13: -0.1942 REMARK 3 S21: 0.3448 S22: 0.2892 S23: 0.3925 REMARK 3 S31: 0.2320 S32: -0.9286 S33: -0.1338 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4S2W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-15. REMARK 100 THE DEPOSITION ID IS D_1000088111. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10978 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.992 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.52300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 M AMMONIUM SULFATE, 12% PEG 3350, REMARK 280 10% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K, REMARK 280 PH 5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.19550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.42550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.19550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.42550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -160.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 86 REMARK 465 TRP A 87 REMARK 465 ASP A 88 REMARK 465 THR A 89 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 73 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 79 CE NZ REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 ARG A 83 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 84 CG CD1 CD2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 ARG A 135 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 11 147.21 -175.63 REMARK 500 ASN A 18 -168.55 -111.11 REMARK 500 LEU A 84 34.33 -85.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4S2V RELATED DB: PDB REMARK 900 RELATED ID: 4S2X RELATED DB: PDB REMARK 900 RELATED ID: 4S2Y RELATED DB: PDB DBREF 4S2W A 2 161 UNP P0A776 RPPH_ECOLI 1 160 SEQADV 4S2W SER A 1 UNP P0A776 EXPRESSION TAG SEQADV 4S2W ALA A 160 UNP P0A776 GLN 159 ENGINEERED MUTATION SEQADV 4S2W ALA A 161 UNP P0A776 GLU 160 ENGINEERED MUTATION SEQRES 1 A 161 SER MET ILE ASP ASP ASP GLY TYR ARG PRO ASN VAL GLY SEQRES 2 A 161 ILE VAL ILE CYS ASN ARG GLN GLY GLN VAL MET TRP ALA SEQRES 3 A 161 ARG ARG PHE GLY GLN HIS SER TRP GLN PHE PRO GLN GLY SEQRES 4 A 161 GLY ILE ASN PRO GLY GLU SER ALA GLU GLN ALA MET TYR SEQRES 5 A 161 ARG GLU LEU PHE GLU GLU VAL GLY LEU SER ARG LYS ASP SEQRES 6 A 161 VAL ARG ILE LEU ALA SER THR ARG ASN TRP LEU ARG TYR SEQRES 7 A 161 LYS LEU PRO LYS ARG LEU VAL ARG TRP ASP THR LYS PRO SEQRES 8 A 161 VAL CYS ILE GLY GLN LYS GLN LYS TRP PHE LEU LEU GLN SEQRES 9 A 161 LEU VAL SER GLY ASP ALA GLU ILE ASN MET GLN THR SER SEQRES 10 A 161 SER THR PRO GLU PHE ASP GLY TRP ARG TRP VAL SER TYR SEQRES 11 A 161 TRP TYR PRO VAL ARG GLN VAL VAL SER PHE LYS ARG ASP SEQRES 12 A 161 VAL TYR ARG ARG VAL MET LYS GLU PHE ALA SER VAL VAL SEQRES 13 A 161 MET SER LEU ALA ALA HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET SO4 A 205 5 HET SO4 A 206 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 6(O4 S 2-) FORMUL 8 HOH *91(H2 O) HELIX 1 1 SER A 46 GLY A 60 1 15 HELIX 2 2 SER A 62 LYS A 64 5 3 HELIX 3 3 GLY A 108 ILE A 112 5 5 HELIX 4 4 TRP A 131 VAL A 137 1 7 HELIX 5 5 VAL A 138 PHE A 140 5 3 HELIX 6 6 LYS A 141 ALA A 161 1 21 SHEET 1 A 4 GLN A 38 GLY A 40 0 SHEET 2 A 4 TYR A 8 CYS A 17 -1 N VAL A 12 O GLY A 39 SHEET 3 A 4 GLY A 95 LEU A 105 1 O LEU A 103 N CYS A 17 SHEET 4 A 4 VAL A 66 SER A 71 -1 N LEU A 69 O LEU A 102 SHEET 1 B 4 GLN A 38 GLY A 40 0 SHEET 2 B 4 TYR A 8 CYS A 17 -1 N VAL A 12 O GLY A 39 SHEET 3 B 4 GLY A 95 LEU A 105 1 O LEU A 103 N CYS A 17 SHEET 4 B 4 LEU A 76 LYS A 79 -1 N LEU A 76 O GLN A 98 SHEET 1 C 3 TRP A 34 GLN A 35 0 SHEET 2 C 3 VAL A 23 ARG A 28 -1 N ALA A 26 O GLN A 35 SHEET 3 C 3 PHE A 122 VAL A 128 -1 O GLY A 124 N ARG A 27 SITE 1 AC1 5 SER A 1 GLY A 40 ARG A 53 HOH A 306 SITE 2 AC1 5 HOH A 332 SITE 1 AC2 8 ARG A 28 GLN A 38 TYR A 78 LEU A 80 SITE 2 AC2 8 GLN A 96 LYS A 141 HOH A 350 HOH A 353 SITE 1 AC3 4 ASN A 18 ARG A 19 GLN A 20 HOH A 335 SITE 1 AC4 5 TRP A 75 ARG A 77 ARG A 142 ASP A 143 SITE 2 AC4 5 ARG A 146 SITE 1 AC5 3 GLN A 31 HIS A 32 SER A 33 SITE 1 AC6 5 TRP A 75 LEU A 76 ARG A 77 ARG A 142 SITE 2 AC6 5 ARG A 147 CRYST1 78.391 38.851 56.806 90.00 98.95 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012757 0.000000 0.002009 0.00000 SCALE2 0.000000 0.025739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017821 0.00000