data_4TR3 # _entry.id 4TR3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4TR3 WWPDB D_1000202119 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4TR3 _pdbx_database_status.recvd_initial_deposition_date 2014-06-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Steegborn, C.' 1 'Schweizer, U.' 2 'Schlicker, C.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 0027-8424 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 111 _citation.language ? _citation.page_first 10526 _citation.page_last ? _citation.title 'Crystal structure of mammalian selenocysteine-dependent iodothyronine deiodinase suggests a peroxiredoxin-like catalytic mechanism.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1323873111 _citation.pdbx_database_id_PubMed 25002520 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Schweizer, U.' 1 primary 'Schlicker, C.' 2 primary 'Braun, D.' 3 primary 'Kohrle, J.' 4 primary 'Steegborn, C.' 5 # _cell.length_a 48.920 _cell.length_b 54.300 _cell.length_c 66.610 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4TR3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TR3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Type III iodothyronine deiodinase' 21696.639 1 1.97.1.11 yes ? 'six N-terminal residues are cloning artifact; three C-terminal residues not visible in electron density' 2 water nat water 18.015 93 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;5DIII,DIOIII,Type 3 DI,Type-III 5'-deiodinase ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GIDPFTGQKLDFFKQAHEGGPAPNSEVVRPDGFQSQRILDYAQGTRPLVLNFGSCTCPPF(MSE)AR(MSE)SAFQRLVT KYQRDVDFLIIYIEEAHPSDGWVTTDSPYVIPQHRSLEDRVSAARVLQQGAPGCALVLDT(MSE)ANSSSSAYGAYFERL YVIQSGTI(MSE)YQGGRGPDGYQVSELRTWLERYDEQLHGTRPHRF ; _entity_poly.pdbx_seq_one_letter_code_can ;GIDPFTGQKLDFFKQAHEGGPAPNSEVVRPDGFQSQRILDYAQGTRPLVLNFGSCTCPPFMARMSAFQRLVTKYQRDVDF LIIYIEEAHPSDGWVTTDSPYVIPQHRSLEDRVSAARVLQQGAPGCALVLDTMANSSSSAYGAYFERLYVIQSGTIMYQG GRGPDGYQVSELRTWLERYDEQLHGTRPHRF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 ASP n 1 4 PRO n 1 5 PHE n 1 6 THR n 1 7 GLY n 1 8 GLN n 1 9 LYS n 1 10 LEU n 1 11 ASP n 1 12 PHE n 1 13 PHE n 1 14 LYS n 1 15 GLN n 1 16 ALA n 1 17 HIS n 1 18 GLU n 1 19 GLY n 1 20 GLY n 1 21 PRO n 1 22 ALA n 1 23 PRO n 1 24 ASN n 1 25 SER n 1 26 GLU n 1 27 VAL n 1 28 VAL n 1 29 ARG n 1 30 PRO n 1 31 ASP n 1 32 GLY n 1 33 PHE n 1 34 GLN n 1 35 SER n 1 36 GLN n 1 37 ARG n 1 38 ILE n 1 39 LEU n 1 40 ASP n 1 41 TYR n 1 42 ALA n 1 43 GLN n 1 44 GLY n 1 45 THR n 1 46 ARG n 1 47 PRO n 1 48 LEU n 1 49 VAL n 1 50 LEU n 1 51 ASN n 1 52 PHE n 1 53 GLY n 1 54 SER n 1 55 CYS n 1 56 THR n 1 57 CYS n 1 58 PRO n 1 59 PRO n 1 60 PHE n 1 61 MSE n 1 62 ALA n 1 63 ARG n 1 64 MSE n 1 65 SER n 1 66 ALA n 1 67 PHE n 1 68 GLN n 1 69 ARG n 1 70 LEU n 1 71 VAL n 1 72 THR n 1 73 LYS n 1 74 TYR n 1 75 GLN n 1 76 ARG n 1 77 ASP n 1 78 VAL n 1 79 ASP n 1 80 PHE n 1 81 LEU n 1 82 ILE n 1 83 ILE n 1 84 TYR n 1 85 ILE n 1 86 GLU n 1 87 GLU n 1 88 ALA n 1 89 HIS n 1 90 PRO n 1 91 SER n 1 92 ASP n 1 93 GLY n 1 94 TRP n 1 95 VAL n 1 96 THR n 1 97 THR n 1 98 ASP n 1 99 SER n 1 100 PRO n 1 101 TYR n 1 102 VAL n 1 103 ILE n 1 104 PRO n 1 105 GLN n 1 106 HIS n 1 107 ARG n 1 108 SER n 1 109 LEU n 1 110 GLU n 1 111 ASP n 1 112 ARG n 1 113 VAL n 1 114 SER n 1 115 ALA n 1 116 ALA n 1 117 ARG n 1 118 VAL n 1 119 LEU n 1 120 GLN n 1 121 GLN n 1 122 GLY n 1 123 ALA n 1 124 PRO n 1 125 GLY n 1 126 CYS n 1 127 ALA n 1 128 LEU n 1 129 VAL n 1 130 LEU n 1 131 ASP n 1 132 THR n 1 133 MSE n 1 134 ALA n 1 135 ASN n 1 136 SER n 1 137 SER n 1 138 SER n 1 139 SER n 1 140 ALA n 1 141 TYR n 1 142 GLY n 1 143 ALA n 1 144 TYR n 1 145 PHE n 1 146 GLU n 1 147 ARG n 1 148 LEU n 1 149 TYR n 1 150 VAL n 1 151 ILE n 1 152 GLN n 1 153 SER n 1 154 GLY n 1 155 THR n 1 156 ILE n 1 157 MSE n 1 158 TYR n 1 159 GLN n 1 160 GLY n 1 161 GLY n 1 162 ARG n 1 163 GLY n 1 164 PRO n 1 165 ASP n 1 166 GLY n 1 167 TYR n 1 168 GLN n 1 169 VAL n 1 170 SER n 1 171 GLU n 1 172 LEU n 1 173 ARG n 1 174 THR n 1 175 TRP n 1 176 LEU n 1 177 GLU n 1 178 ARG n 1 179 TYR n 1 180 ASP n 1 181 GLU n 1 182 GLN n 1 183 LEU n 1 184 HIS n 1 185 GLY n 1 186 THR n 1 187 ARG n 1 188 PRO n 1 189 HIS n 1 190 ARG n 1 191 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 191 _entity_src_gen.gene_src_common_name 'House mouse' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Dio3 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET151 TOPO' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IOD3_MOUSE _struct_ref.pdbx_db_accession Q91ZI8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GQKLDFFKQAHEGGPAPNSEVVRPDGFQSQRILDYAQGTRPLVLNFGSCTUPPFMARMSAFQRLVTKYQRDVDFLIIYIE EAHPSDGWVTTDSPYVIPQHRSLEDRVSAARVLQQGAPGCALVLDTMANSSSSAYGAYFERLYVIQSGTIMYQGGRGPDG YQVSELRTWLERYDEQLHGTRPHRF ; _struct_ref.pdbx_align_begin 120 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4TR3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q91ZI8 _struct_ref_seq.db_align_beg 120 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 304 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 120 _struct_ref_seq.pdbx_auth_seq_align_end 304 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4TR3 GLY A 1 ? UNP Q91ZI8 ? ? 'expression tag' 114 1 1 4TR3 ILE A 2 ? UNP Q91ZI8 ? ? 'expression tag' 115 2 1 4TR3 ASP A 3 ? UNP Q91ZI8 ? ? 'expression tag' 116 3 1 4TR3 PRO A 4 ? UNP Q91ZI8 ? ? 'expression tag' 117 4 1 4TR3 PHE A 5 ? UNP Q91ZI8 ? ? 'expression tag' 118 5 1 4TR3 THR A 6 ? UNP Q91ZI8 ? ? 'expression tag' 119 6 1 4TR3 CYS A 57 ? UNP Q91ZI8 SEC 170 'engineered mutation' 170 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEC 'L-peptide linking' y SELENOCYSTEINE ? 'C3 H7 N O2 Se' 168.053 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4TR3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20 % PEG 3350, 0.2 M Ammoniumcitrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2008-11-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4TR3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 20.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 14304 _reflns.number_obs 14015 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.7 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.aniso_B[1][1] 1.2700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.5400 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.7300 _refine.B_iso_max 51.080 _refine.B_iso_mean 18.0 _refine.B_iso_min 4.620 _refine.correlation_coeff_Fo_to_Fc 0.9300 _refine.correlation_coeff_Fo_to_Fc_free 0.9000 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4TR3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.9000 _refine.ls_d_res_low 42.0700 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14015 _refine.ls_number_reflns_R_free 706 _refine.ls_number_reflns_R_work 13309 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.9500 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1885 _refine.ls_R_factor_R_free 0.2272 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1866 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1710 _refine.pdbx_overall_ESU_R_Free 0.1520 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.0350 _refine.overall_SU_ML 0.0900 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.9000 _refine_hist.d_res_low 42.0700 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1555 _refine_hist.pdbx_number_residues_total 188 _refine_hist.pdbx_B_iso_mean_solvent 22.18 _refine_hist.pdbx_number_atoms_protein 1462 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.022 1500 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.395 1.953 2038 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 5.862 5.000 187 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.065 22.973 74 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.826 15.000 226 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.055 15.000 14 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.098 0.200 212 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.021 1194 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.971 1.500 935 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.797 2.000 1498 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.721 3.000 565 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 4.236 4.500 540 ? r_scangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8960 _refine_ls_shell.d_res_low 1.9450 _refine_ls_shell.number_reflns_all 773 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_R_work 727 _refine_ls_shell.percent_reflns_obs 72.7200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2680 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1860 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? # _struct.entry_id 4TR3 _struct.title 'Mouse iodothyronine deiodinase 3 catalytic core, SeMet-labeled active site mutant SeCys->Cys' _struct.pdbx_descriptor 'Mouse iodothyronine deiodinase 3 catalytic core (E.C.1.97.1.11)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4TR3 _struct_keywords.text 'deiodinase, thyronine hormones, thioredoxin fold, oxidoreductase' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 39 ? ALA A 42 ? LEU A 152 ALA A 155 5 ? 4 HELX_P HELX_P2 AA2 CYS A 57 ? ARG A 63 ? CYS A 170 ARG A 176 1 ? 7 HELX_P HELX_P3 AA3 ARG A 63 ? GLN A 75 ? ARG A 176 GLN A 188 1 ? 13 HELX_P HELX_P4 AA4 SER A 108 ? GLY A 122 ? SER A 221 GLY A 235 1 ? 15 HELX_P HELX_P5 AA5 ASN A 135 ? TYR A 141 ? ASN A 248 TYR A 254 1 ? 7 HELX_P HELX_P6 AA6 GLY A 166 ? GLY A 185 ? GLY A 279 GLY A 298 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A PHE 60 C ? ? ? 1_555 A MSE 61 N ? ? A PHE 173 A MSE 174 1_555 ? ? ? ? ? ? ? 1.340 ? covale2 covale both ? A MSE 61 C ? ? ? 1_555 A ALA 62 N ? ? A MSE 174 A ALA 175 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale both ? A ARG 63 C ? ? ? 1_555 A MSE 64 N ? ? A ARG 176 A MSE 177 1_555 ? ? ? ? ? ? ? 1.334 ? covale4 covale both ? A MSE 64 C ? ? ? 1_555 A SER 65 N ? ? A MSE 177 A SER 178 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale both ? A THR 132 C ? ? ? 1_555 A MSE 133 N ? ? A THR 245 A MSE 246 1_555 ? ? ? ? ? ? ? 1.324 ? covale6 covale both ? A MSE 133 C ? ? ? 1_555 A ALA 134 N ? ? A MSE 246 A ALA 247 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale both ? A ILE 156 C ? ? ? 1_555 A MSE 157 N ? ? A ILE 269 A MSE 270 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale both ? A MSE 157 C ? ? ? 1_555 A TYR 158 N ? ? A MSE 270 A TYR 271 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 35 ? ARG A 37 ? SER A 148 ARG A 150 AA1 2 GLU A 26 ? VAL A 28 ? GLU A 139 VAL A 141 AA1 3 LEU A 128 ? ASP A 131 ? LEU A 241 ASP A 244 AA1 4 ASP A 79 ? TYR A 84 ? ASP A 192 TYR A 197 AA1 5 LEU A 48 ? GLY A 53 ? LEU A 161 GLY A 166 AA1 6 ARG A 147 ? GLN A 152 ? ARG A 260 GLN A 265 AA1 7 THR A 155 ? GLN A 159 ? THR A 268 GLN A 272 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLN A 36 ? O GLN A 149 N VAL A 27 ? N VAL A 140 AA1 2 3 N VAL A 28 ? N VAL A 141 O LEU A 130 ? O LEU A 243 AA1 3 4 O VAL A 129 ? O VAL A 242 N TYR A 84 ? N TYR A 197 AA1 4 5 O ASP A 79 ? O ASP A 192 N VAL A 49 ? N VAL A 162 AA1 5 6 N LEU A 48 ? N LEU A 161 O ILE A 151 ? O ILE A 264 AA1 6 7 N VAL A 150 ? N VAL A 263 O MSE A 157 ? O MSE A 270 # _atom_sites.entry_id 4TR3 _atom_sites.fract_transf_matrix[1][1] 0.020442 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018416 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015013 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 114 114 GLY GLY A . n A 1 2 ILE 2 115 115 ILE ILE A . n A 1 3 ASP 3 116 116 ASP ASP A . n A 1 4 PRO 4 117 117 PRO PRO A . n A 1 5 PHE 5 118 118 PHE PHE A . n A 1 6 THR 6 119 119 THR THR A . n A 1 7 GLY 7 120 120 GLY GLY A . n A 1 8 GLN 8 121 121 GLN GLN A . n A 1 9 LYS 9 122 122 LYS LYS A . n A 1 10 LEU 10 123 123 LEU LEU A . n A 1 11 ASP 11 124 124 ASP ASP A . n A 1 12 PHE 12 125 125 PHE PHE A . n A 1 13 PHE 13 126 126 PHE PHE A . n A 1 14 LYS 14 127 127 LYS LYS A . n A 1 15 GLN 15 128 128 GLN GLN A . n A 1 16 ALA 16 129 129 ALA ALA A . n A 1 17 HIS 17 130 130 HIS HIS A . n A 1 18 GLU 18 131 131 GLU GLU A . n A 1 19 GLY 19 132 132 GLY GLY A . n A 1 20 GLY 20 133 133 GLY GLY A . n A 1 21 PRO 21 134 134 PRO PRO A . n A 1 22 ALA 22 135 135 ALA ALA A . n A 1 23 PRO 23 136 136 PRO PRO A . n A 1 24 ASN 24 137 137 ASN ASN A . n A 1 25 SER 25 138 138 SER SER A . n A 1 26 GLU 26 139 139 GLU GLU A . n A 1 27 VAL 27 140 140 VAL VAL A . n A 1 28 VAL 28 141 141 VAL VAL A . n A 1 29 ARG 29 142 142 ARG ARG A . n A 1 30 PRO 30 143 143 PRO PRO A . n A 1 31 ASP 31 144 144 ASP ASP A . n A 1 32 GLY 32 145 145 GLY GLY A . n A 1 33 PHE 33 146 146 PHE PHE A . n A 1 34 GLN 34 147 147 GLN GLN A . n A 1 35 SER 35 148 148 SER SER A . n A 1 36 GLN 36 149 149 GLN GLN A . n A 1 37 ARG 37 150 150 ARG ARG A . n A 1 38 ILE 38 151 151 ILE ILE A . n A 1 39 LEU 39 152 152 LEU LEU A . n A 1 40 ASP 40 153 153 ASP ASP A . n A 1 41 TYR 41 154 154 TYR TYR A . n A 1 42 ALA 42 155 155 ALA ALA A . n A 1 43 GLN 43 156 156 GLN GLN A . n A 1 44 GLY 44 157 157 GLY GLY A . n A 1 45 THR 45 158 158 THR THR A . n A 1 46 ARG 46 159 159 ARG ARG A . n A 1 47 PRO 47 160 160 PRO PRO A . n A 1 48 LEU 48 161 161 LEU LEU A . n A 1 49 VAL 49 162 162 VAL VAL A . n A 1 50 LEU 50 163 163 LEU LEU A . n A 1 51 ASN 51 164 164 ASN ASN A . n A 1 52 PHE 52 165 165 PHE PHE A . n A 1 53 GLY 53 166 166 GLY GLY A . n A 1 54 SER 54 167 167 SER SER A . n A 1 55 CYS 55 168 168 CYS CYS A . n A 1 56 THR 56 169 169 THR THR A . n A 1 57 CYS 57 170 170 CYS CYS A . n A 1 58 PRO 58 171 171 PRO PRO A . n A 1 59 PRO 59 172 172 PRO PRO A . n A 1 60 PHE 60 173 173 PHE PHE A . n A 1 61 MSE 61 174 174 MSE MSE A . n A 1 62 ALA 62 175 175 ALA ALA A . n A 1 63 ARG 63 176 176 ARG ARG A . n A 1 64 MSE 64 177 177 MSE MSE A . n A 1 65 SER 65 178 178 SER SER A . n A 1 66 ALA 66 179 179 ALA ALA A . n A 1 67 PHE 67 180 180 PHE PHE A . n A 1 68 GLN 68 181 181 GLN GLN A . n A 1 69 ARG 69 182 182 ARG ARG A . n A 1 70 LEU 70 183 183 LEU LEU A . n A 1 71 VAL 71 184 184 VAL VAL A . n A 1 72 THR 72 185 185 THR THR A . n A 1 73 LYS 73 186 186 LYS LYS A . n A 1 74 TYR 74 187 187 TYR TYR A . n A 1 75 GLN 75 188 188 GLN GLN A . n A 1 76 ARG 76 189 189 ARG ARG A . n A 1 77 ASP 77 190 190 ASP ASP A . n A 1 78 VAL 78 191 191 VAL VAL A . n A 1 79 ASP 79 192 192 ASP ASP A . n A 1 80 PHE 80 193 193 PHE PHE A . n A 1 81 LEU 81 194 194 LEU LEU A . n A 1 82 ILE 82 195 195 ILE ILE A . n A 1 83 ILE 83 196 196 ILE ILE A . n A 1 84 TYR 84 197 197 TYR TYR A . n A 1 85 ILE 85 198 198 ILE ILE A . n A 1 86 GLU 86 199 199 GLU GLU A . n A 1 87 GLU 87 200 200 GLU GLU A . n A 1 88 ALA 88 201 201 ALA ALA A . n A 1 89 HIS 89 202 202 HIS HIS A . n A 1 90 PRO 90 203 203 PRO PRO A . n A 1 91 SER 91 204 204 SER SER A . n A 1 92 ASP 92 205 205 ASP ASP A . n A 1 93 GLY 93 206 206 GLY GLY A . n A 1 94 TRP 94 207 207 TRP TRP A . n A 1 95 VAL 95 208 208 VAL VAL A . n A 1 96 THR 96 209 209 THR THR A . n A 1 97 THR 97 210 210 THR THR A . n A 1 98 ASP 98 211 211 ASP ASP A . n A 1 99 SER 99 212 212 SER SER A . n A 1 100 PRO 100 213 213 PRO PRO A . n A 1 101 TYR 101 214 214 TYR TYR A . n A 1 102 VAL 102 215 215 VAL VAL A . n A 1 103 ILE 103 216 216 ILE ILE A . n A 1 104 PRO 104 217 217 PRO PRO A . n A 1 105 GLN 105 218 218 GLN GLN A . n A 1 106 HIS 106 219 219 HIS HIS A . n A 1 107 ARG 107 220 220 ARG ARG A . n A 1 108 SER 108 221 221 SER SER A . n A 1 109 LEU 109 222 222 LEU LEU A . n A 1 110 GLU 110 223 223 GLU GLU A . n A 1 111 ASP 111 224 224 ASP ASP A . n A 1 112 ARG 112 225 225 ARG ARG A . n A 1 113 VAL 113 226 226 VAL VAL A . n A 1 114 SER 114 227 227 SER SER A . n A 1 115 ALA 115 228 228 ALA ALA A . n A 1 116 ALA 116 229 229 ALA ALA A . n A 1 117 ARG 117 230 230 ARG ARG A . n A 1 118 VAL 118 231 231 VAL VAL A . n A 1 119 LEU 119 232 232 LEU LEU A . n A 1 120 GLN 120 233 233 GLN GLN A . n A 1 121 GLN 121 234 234 GLN GLN A . n A 1 122 GLY 122 235 235 GLY GLY A . n A 1 123 ALA 123 236 236 ALA ALA A . n A 1 124 PRO 124 237 237 PRO PRO A . n A 1 125 GLY 125 238 238 GLY GLY A . n A 1 126 CYS 126 239 239 CYS CYS A . n A 1 127 ALA 127 240 240 ALA ALA A . n A 1 128 LEU 128 241 241 LEU LEU A . n A 1 129 VAL 129 242 242 VAL VAL A . n A 1 130 LEU 130 243 243 LEU LEU A . n A 1 131 ASP 131 244 244 ASP ASP A . n A 1 132 THR 132 245 245 THR THR A . n A 1 133 MSE 133 246 246 MSE MSE A . n A 1 134 ALA 134 247 247 ALA ALA A . n A 1 135 ASN 135 248 248 ASN ASN A . n A 1 136 SER 136 249 249 SER SER A . n A 1 137 SER 137 250 250 SER SER A . n A 1 138 SER 138 251 251 SER SER A . n A 1 139 SER 139 252 252 SER SER A . n A 1 140 ALA 140 253 253 ALA ALA A . n A 1 141 TYR 141 254 254 TYR TYR A . n A 1 142 GLY 142 255 255 GLY GLY A . n A 1 143 ALA 143 256 256 ALA ALA A . n A 1 144 TYR 144 257 257 TYR TYR A . n A 1 145 PHE 145 258 258 PHE PHE A . n A 1 146 GLU 146 259 259 GLU GLU A . n A 1 147 ARG 147 260 260 ARG ARG A . n A 1 148 LEU 148 261 261 LEU LEU A . n A 1 149 TYR 149 262 262 TYR TYR A . n A 1 150 VAL 150 263 263 VAL VAL A . n A 1 151 ILE 151 264 264 ILE ILE A . n A 1 152 GLN 152 265 265 GLN GLN A . n A 1 153 SER 153 266 266 SER SER A . n A 1 154 GLY 154 267 267 GLY GLY A . n A 1 155 THR 155 268 268 THR THR A . n A 1 156 ILE 156 269 269 ILE ILE A . n A 1 157 MSE 157 270 270 MSE MSE A . n A 1 158 TYR 158 271 271 TYR TYR A . n A 1 159 GLN 159 272 272 GLN GLN A . n A 1 160 GLY 160 273 273 GLY GLY A . n A 1 161 GLY 161 274 274 GLY GLY A . n A 1 162 ARG 162 275 275 ARG ARG A . n A 1 163 GLY 163 276 276 GLY GLY A . n A 1 164 PRO 164 277 277 PRO PRO A . n A 1 165 ASP 165 278 278 ASP ASP A . n A 1 166 GLY 166 279 279 GLY GLY A . n A 1 167 TYR 167 280 280 TYR TYR A . n A 1 168 GLN 168 281 281 GLN GLN A . n A 1 169 VAL 169 282 282 VAL VAL A . n A 1 170 SER 170 283 283 SER SER A . n A 1 171 GLU 171 284 284 GLU GLU A . n A 1 172 LEU 172 285 285 LEU LEU A . n A 1 173 ARG 173 286 286 ARG ARG A . n A 1 174 THR 174 287 287 THR THR A . n A 1 175 TRP 175 288 288 TRP TRP A . n A 1 176 LEU 176 289 289 LEU LEU A . n A 1 177 GLU 177 290 290 GLU GLU A . n A 1 178 ARG 178 291 291 ARG ARG A . n A 1 179 TYR 179 292 292 TYR TYR A . n A 1 180 ASP 180 293 293 ASP ASP A . n A 1 181 GLU 181 294 294 GLU GLU A . n A 1 182 GLN 182 295 295 GLN GLN A . n A 1 183 LEU 183 296 296 LEU LEU A . n A 1 184 HIS 184 297 297 HIS HIS A . n A 1 185 GLY 185 298 298 GLY GLY A . n A 1 186 THR 186 299 299 THR THR A . n A 1 187 ARG 187 300 300 ARG ARG A . n A 1 188 PRO 188 301 301 PRO PRO A . n A 1 189 HIS 189 302 ? ? ? A . n A 1 190 ARG 190 303 ? ? ? A . n A 1 191 PHE 191 304 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 401 226 HOH HOH A . B 2 HOH 2 402 18 HOH HOH A . B 2 HOH 3 403 27 HOH HOH A . B 2 HOH 4 404 45 HOH HOH A . B 2 HOH 5 405 219 HOH HOH A . B 2 HOH 6 406 15 HOH HOH A . B 2 HOH 7 407 148 HOH HOH A . B 2 HOH 8 408 228 HOH HOH A . B 2 HOH 9 409 8 HOH HOH A . B 2 HOH 10 410 16 HOH HOH A . B 2 HOH 11 411 147 HOH HOH A . B 2 HOH 12 412 215 HOH HOH A . B 2 HOH 13 413 153 HOH HOH A . B 2 HOH 14 414 32 HOH HOH A . B 2 HOH 15 415 13 HOH HOH A . B 2 HOH 16 416 19 HOH HOH A . B 2 HOH 17 417 235 HOH HOH A . B 2 HOH 18 418 106 HOH HOH A . B 2 HOH 19 419 92 HOH HOH A . B 2 HOH 20 420 172 HOH HOH A . B 2 HOH 21 421 210 HOH HOH A . B 2 HOH 22 422 93 HOH HOH A . B 2 HOH 23 423 149 HOH HOH A . B 2 HOH 24 424 90 HOH HOH A . B 2 HOH 25 425 94 HOH HOH A . B 2 HOH 26 426 14 HOH HOH A . B 2 HOH 27 427 162 HOH HOH A . B 2 HOH 28 428 155 HOH HOH A . B 2 HOH 29 429 161 HOH HOH A . B 2 HOH 30 430 7 HOH HOH A . B 2 HOH 31 431 10 HOH HOH A . B 2 HOH 32 432 6 HOH HOH A . B 2 HOH 33 433 28 HOH HOH A . B 2 HOH 34 434 193 HOH HOH A . B 2 HOH 35 435 195 HOH HOH A . B 2 HOH 36 436 179 HOH HOH A . B 2 HOH 37 437 2 HOH HOH A . B 2 HOH 38 438 31 HOH HOH A . B 2 HOH 39 439 43 HOH HOH A . B 2 HOH 40 440 185 HOH HOH A . B 2 HOH 41 441 180 HOH HOH A . B 2 HOH 42 442 29 HOH HOH A . B 2 HOH 43 443 38 HOH HOH A . B 2 HOH 44 444 194 HOH HOH A . B 2 HOH 45 445 198 HOH HOH A . B 2 HOH 46 446 134 HOH HOH A . B 2 HOH 47 447 150 HOH HOH A . B 2 HOH 48 448 214 HOH HOH A . B 2 HOH 49 449 233 HOH HOH A . B 2 HOH 50 450 1 HOH HOH A . B 2 HOH 51 451 3 HOH HOH A . B 2 HOH 52 452 5 HOH HOH A . B 2 HOH 53 453 11 HOH HOH A . B 2 HOH 54 454 12 HOH HOH A . B 2 HOH 55 455 17 HOH HOH A . B 2 HOH 56 456 22 HOH HOH A . B 2 HOH 57 457 23 HOH HOH A . B 2 HOH 58 458 24 HOH HOH A . B 2 HOH 59 459 30 HOH HOH A . B 2 HOH 60 460 33 HOH HOH A . B 2 HOH 61 461 40 HOH HOH A . B 2 HOH 62 462 41 HOH HOH A . B 2 HOH 63 463 42 HOH HOH A . B 2 HOH 64 464 47 HOH HOH A . B 2 HOH 65 465 49 HOH HOH A . B 2 HOH 66 466 50 HOH HOH A . B 2 HOH 67 467 55 HOH HOH A . B 2 HOH 68 468 58 HOH HOH A . B 2 HOH 69 469 59 HOH HOH A . B 2 HOH 70 470 88 HOH HOH A . B 2 HOH 71 471 95 HOH HOH A . B 2 HOH 72 472 97 HOH HOH A . B 2 HOH 73 473 98 HOH HOH A . B 2 HOH 74 474 103 HOH HOH A . B 2 HOH 75 475 107 HOH HOH A . B 2 HOH 76 476 133 HOH HOH A . B 2 HOH 77 477 136 HOH HOH A . B 2 HOH 78 478 154 HOH HOH A . B 2 HOH 79 479 156 HOH HOH A . B 2 HOH 80 480 160 HOH HOH A . B 2 HOH 81 481 184 HOH HOH A . B 2 HOH 82 482 191 HOH HOH A . B 2 HOH 83 483 197 HOH HOH A . B 2 HOH 84 484 201 HOH HOH A . B 2 HOH 85 485 202 HOH HOH A . B 2 HOH 86 486 216 HOH HOH A . B 2 HOH 87 487 220 HOH HOH A . B 2 HOH 88 488 221 HOH HOH A . B 2 HOH 89 489 223 HOH HOH A . B 2 HOH 90 490 227 HOH HOH A . B 2 HOH 91 491 237 HOH HOH A . B 2 HOH 92 492 247 HOH HOH A . B 2 HOH 93 493 248 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 61 A MSE 174 ? MET 'modified residue' 2 A MSE 64 A MSE 177 ? MET 'modified residue' 3 A MSE 133 A MSE 246 ? MET 'modified residue' 4 A MSE 157 A MSE 270 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 10230 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-23 2 'Structure model' 1 1 2015-02-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.5.0042 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.14 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? ARP ? ? ? . 5 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 236 ? ? 34.92 60.87 2 1 PHE A 258 ? ? 74.13 -83.02 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 482 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.85 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . _pdbx_distant_solvent_atoms.label_comp_id ? _pdbx_distant_solvent_atoms.label_asym_id ? _pdbx_distant_solvent_atoms.label_seq_id ? _pdbx_distant_solvent_atoms.label_atom_id ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A PHE 126 ? CG ? A PHE 13 CG 2 1 Y 1 A PHE 126 ? CD1 ? A PHE 13 CD1 3 1 Y 1 A PHE 126 ? CD2 ? A PHE 13 CD2 4 1 Y 1 A PHE 126 ? CE1 ? A PHE 13 CE1 5 1 Y 1 A PHE 126 ? CE2 ? A PHE 13 CE2 6 1 Y 1 A PHE 126 ? CZ ? A PHE 13 CZ 7 1 Y 1 A LYS 127 ? CG ? A LYS 14 CG 8 1 Y 1 A LYS 127 ? CD ? A LYS 14 CD 9 1 Y 1 A LYS 127 ? CE ? A LYS 14 CE 10 1 Y 1 A LYS 127 ? NZ ? A LYS 14 NZ 11 1 Y 1 A VAL 208 ? CG1 ? A VAL 95 CG1 12 1 Y 1 A VAL 208 ? CG2 ? A VAL 95 CG2 13 1 Y 1 A THR 209 ? OG1 ? A THR 96 OG1 14 1 Y 1 A THR 209 ? CG2 ? A THR 96 CG2 15 1 Y 1 A THR 210 ? OG1 ? A THR 97 OG1 16 1 Y 1 A THR 210 ? CG2 ? A THR 97 CG2 17 1 Y 1 A ASP 278 ? OD1 ? A ASP 165 OD1 18 1 Y 1 A ASP 278 ? OD2 ? A ASP 165 OD2 19 1 Y 1 A GLU 284 ? CD ? A GLU 171 CD 20 1 Y 1 A GLU 284 ? OE1 ? A GLU 171 OE1 21 1 Y 1 A GLU 284 ? OE2 ? A GLU 171 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 302 ? A HIS 189 2 1 Y 1 A ARG 303 ? A ARG 190 3 1 Y 1 A PHE 304 ? A PHE 191 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #