data_4TTN # _entry.id 4TTN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4TTN WWPDB D_1000202141 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4TTN _pdbx_database_status.recvd_initial_deposition_date 2014-06-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, C.K.' 1 'King, G.J.' 2 'Craik, D.J.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_id_ASTM ACIEAY _citation.journal_id_CSD 0179 _citation.journal_id_ISSN 1521-3773 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 53 _citation.language ? _citation.page_first 11236 _citation.page_last 11241 _citation.title 'Racemic and Quasi-Racemic X-ray Structures of Cyclic Disulfide-Rich Peptide Drug Scaffolds.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/anie.201406563 _citation.pdbx_database_id_PubMed 25168664 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wang, C.K.' 1 primary 'King, G.J.' 2 primary 'Northfield, S.E.' 3 primary 'Ojeda, P.G.' 4 primary 'Craik, D.J.' 5 # _cell.entry_id 4TTN _cell.length_a 22.186 _cell.length_b 25.923 _cell.length_c 37.713 _cell.angle_alpha 93.80 _cell.angle_beta 106.59 _cell.angle_gamma 99.91 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TTN _symmetry.space_group_name_H-M 'P -1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 2 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn Kalata-B1 2931.371 1 ? G6A ? ? 2 polymer syn 'D-kalata B1' 2917.345 1 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 water nat water 18.015 62 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GLPVCAETCVGGTCNTPGCTCSWPVCTRN GLPVCAETCVGGTCNTPGCTCSWPVCTRN A ? 2 'polypeptide(D)' no yes ;G(DLE)(DPR)(DVA)(DCY)G(DGL)(DTH)(DCY)(DVA)GG(DTH)(DCY)(DSG)(DTH)(DPR)G(DCY)(DTH) (DCY)(DSN)(DTR)(DPR)(DVA)(DCY)(DTH)(DAR)(DSG) ; GLPVCGETCVGGTCNTPGCTCSWPVCTRN B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 LEU n 1 3 PRO n 1 4 VAL n 1 5 CYS n 1 6 ALA n 1 7 GLU n 1 8 THR n 1 9 CYS n 1 10 VAL n 1 11 GLY n 1 12 GLY n 1 13 THR n 1 14 CYS n 1 15 ASN n 1 16 THR n 1 17 PRO n 1 18 GLY n 1 19 CYS n 1 20 THR n 1 21 CYS n 1 22 SER n 1 23 TRP n 1 24 PRO n 1 25 VAL n 1 26 CYS n 1 27 THR n 1 28 ARG n 1 29 ASN n 2 1 GLY n 2 2 DLE n 2 3 DPR n 2 4 DVA n 2 5 DCY n 2 6 GLY n 2 7 DGL n 2 8 DTH n 2 9 DCY n 2 10 DVA n 2 11 GLY n 2 12 GLY n 2 13 DTH n 2 14 DCY n 2 15 DSG n 2 16 DTH n 2 17 DPR n 2 18 GLY n 2 19 DCY n 2 20 DTH n 2 21 DCY n 2 22 DSN n 2 23 DTR n 2 24 DPR n 2 25 DVA n 2 26 DCY n 2 27 DTH n 2 28 DAR n 2 29 DSG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 29 'Oldenlandia affinis' ? 60225 ? 2 1 sample 1 29 'synthetic construct' ? 32630 ? # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.seq_align _struct_ref.seq_dif _struct_ref.pdbx_db_accession _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_isoform KAB1_OLDAF UNP ? 1 1 ? ? P56254 GLPVCGETCVGGTCNTPGCTCSWPVCTRN 89 ? ? 4TTN PDB ? 2 2 ? ? 4TTN ? 1 ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4TTN A 1 ? 29 ? P56254 89 ? 117 ? 1 29 2 2 4TTN B 1 ? 29 ? 4TTN 1 ? 29 ? 1 29 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4TTN _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 6 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P56254 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 94 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 6 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAR 'D-peptide linking' . D-ARGININE ? 'C6 H15 N4 O2 1' 175.209 DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158 DGL 'D-peptide linking' . 'D-GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DPR 'D-peptide linking' . D-PROLINE ? 'C5 H9 N O2' 115.130 DSG 'D-peptide linking' . D-ASPARAGINE ? 'C4 H8 N2 O3' 132.118 DSN 'D-peptide linking' . D-SERINE ? 'C3 H7 N O3' 105.093 DTH 'D-peptide linking' . D-THREONINE ? 'C4 H9 N O3' 119.119 DTR 'D-peptide linking' . D-TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 DVA 'D-peptide linking' . D-VALINE ? 'C5 H11 N O2' 117.146 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4TTN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.73 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 29.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '14% w/v (+/-)-2-methyl-2,4-pentanediol, 4% v/v 1,3-Propanediol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-03-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9537 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9537 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' # _reflns.B_iso_Wilson_estimate 47.330 _reflns.entry_id 4TTN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.25 _reflns.d_resolution_low 25.35 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20418 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.90 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.95 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.25 _reflns_shell.d_res_low 1.29 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 5.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 89.90 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.138 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.9 _reflns_shell.pdbx_Rsym_value 0.138 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4TTN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20417 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.345 _refine.ls_d_res_high 1.2507 _refine.ls_percent_reflns_obs 93.80 _refine.ls_R_factor_obs 0.2133 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2116 _refine.ls_R_factor_R_free 0.2294 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.80 _refine.ls_number_reflns_R_free 2000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.07 _refine.pdbx_overall_phase_error 13.50 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.2507 _refine_hist.d_res_low 25.345 _refine_hist.pdbx_number_atoms_ligand 105 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 562 _refine_hist.pdbx_number_residues_total 47 _refine_hist.pdbx_B_iso_mean_ligand 10.56 _refine_hist.pdbx_B_iso_mean_solvent 23.51 _refine_hist.pdbx_number_atoms_protein 395 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 451 'X-RAY DIFFRACTION' ? f_angle_d 1.302 ? ? 620 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 12.432 ? ? 160 'X-RAY DIFFRACTION' ? f_chiral_restr 0.056 ? ? 78 'X-RAY DIFFRACTION' ? f_plane_restr 0.009 ? ? 79 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.2507 1.2820 1212 0.2557 87.00 0.2274 . . 131 . . . . 'X-RAY DIFFRACTION' . 1.2820 1.3166 1301 0.2322 91.00 0.2732 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.3166 1.3554 1308 0.2256 92.00 0.2398 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.3554 1.3991 1287 0.2121 92.00 0.2945 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.3991 1.4491 1296 0.2212 93.00 0.2634 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.4491 1.5071 1308 0.2020 94.00 0.2208 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.5071 1.5757 1322 0.1877 93.00 0.1881 . . 143 . . . . 'X-RAY DIFFRACTION' . 1.5757 1.6588 1299 0.1975 95.00 0.2080 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.6588 1.7627 1356 0.2001 95.00 0.2138 . . 147 . . . . 'X-RAY DIFFRACTION' . 1.7627 1.8987 1327 0.1985 95.00 0.2163 . . 144 . . . . 'X-RAY DIFFRACTION' . 1.8987 2.0897 1342 0.2009 96.00 0.2671 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.0897 2.3919 1357 0.2092 96.00 0.2308 . . 146 . . . . 'X-RAY DIFFRACTION' . 2.3919 3.0128 1338 0.2206 96.00 0.2343 . . 146 . . . . 'X-RAY DIFFRACTION' . 3.0128 25.3504 1364 0.2206 97.00 0.2145 . . 148 . . . . # _struct.entry_id 4TTN _struct.title 'Quasi-racemic structure of [G6A]kalata B1' _struct.pdbx_descriptor 'L-[G6A]kalata B1, D-kalata B1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4TTN _struct_keywords.text 'cyclic peptide, disulfide bonds, Plant Protein' _struct_keywords.pdbx_keywords 'PLANT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 19 SG ? ? A CYS 5 A CYS 19 1_555 ? ? ? ? ? ? ? 2.049 ? disulf2 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 21 SG ? ? A CYS 9 A CYS 21 1_555 ? ? ? ? ? ? ? 2.045 ? disulf3 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 14 A CYS 26 1_555 ? ? ? ? ? ? ? 2.045 ? disulf4 disulf ? ? B DCY 5 SG ? ? ? 1_555 B DCY 19 SG ? ? B DCY 5 B DCY 19 1_555 ? ? ? ? ? ? ? 2.054 ? disulf5 disulf ? ? B DCY 9 SG ? ? ? 1_555 B DCY 21 SG ? ? B DCY 9 B DCY 21 1_555 ? ? ? ? ? ? ? 2.035 ? disulf6 disulf ? ? B DCY 14 SG ? ? ? 1_555 B DCY 26 SG ? ? B DCY 14 B DCY 26 1_555 ? ? ? ? ? ? ? 2.039 ? covale1 covale both ? B GLY 1 N ? ? ? 1_555 B DSG 29 C ? ? B GLY 1 B DSG 29 1_555 ? ? ? ? ? ? ? 1.343 ? covale2 covale both ? B GLY 1 C ? ? ? 1_555 B DLE 2 N ? ? B GLY 1 B DLE 2 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale both ? B DLE 2 C ? ? ? 1_555 B DPR 3 N ? ? B DLE 2 B DPR 3 1_555 ? ? ? ? ? ? ? 1.335 ? covale4 covale both ? B DPR 3 C ? ? ? 1_555 B DVA 4 N ? ? B DPR 3 B DVA 4 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale both ? B DVA 4 C ? ? ? 1_555 B DCY 5 N ? ? B DVA 4 B DCY 5 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale both ? B DCY 5 C ? ? ? 1_555 B GLY 6 N ? ? B DCY 5 B GLY 6 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale both ? B GLY 6 C ? ? ? 1_555 B DGL 7 N ? ? B GLY 6 B DGL 7 1_555 ? ? ? ? ? ? ? 1.326 ? covale8 covale both ? B DGL 7 C ? ? ? 1_555 B DTH 8 N ? ? B DGL 7 B DTH 8 1_555 ? ? ? ? ? ? ? 1.325 ? covale9 covale both ? B DTH 8 C ? ? ? 1_555 B DCY 9 N ? ? B DTH 8 B DCY 9 1_555 ? ? ? ? ? ? ? 1.326 ? covale10 covale both ? B DCY 9 C ? ? ? 1_555 B DVA 10 N ? ? B DCY 9 B DVA 10 1_555 ? ? ? ? ? ? ? 1.327 ? covale11 covale both ? B DVA 10 C ? ? ? 1_555 B GLY 11 N ? ? B DVA 10 B GLY 11 1_555 ? ? ? ? ? ? ? 1.328 ? covale12 covale both ? B GLY 12 C ? ? ? 1_555 B DTH 13 N ? ? B GLY 12 B DTH 13 1_555 ? ? ? ? ? ? ? 1.336 ? covale13 covale both ? B DTH 13 C ? ? ? 1_555 B DCY 14 N ? ? B DTH 13 B DCY 14 1_555 ? ? ? ? ? ? ? 1.339 ? covale14 covale both ? B DCY 14 C ? ? ? 1_555 B DSG 15 N ? ? B DCY 14 B DSG 15 1_555 ? ? ? ? ? ? ? 1.330 ? covale15 covale both ? B DSG 15 C ? ? ? 1_555 B DTH 16 N ? ? B DSG 15 B DTH 16 1_555 ? ? ? ? ? ? ? 1.322 ? covale16 covale both ? B DTH 16 C ? ? ? 1_555 B DPR 17 N ? ? B DTH 16 B DPR 17 1_555 ? ? ? ? ? ? ? 1.343 ? covale17 covale both ? B DPR 17 C ? ? ? 1_555 B GLY 18 N ? ? B DPR 17 B GLY 18 1_555 ? ? ? ? ? ? ? 1.328 ? covale18 covale both ? B GLY 18 C ? ? ? 1_555 B DCY 19 N ? ? B GLY 18 B DCY 19 1_555 ? ? ? ? ? ? ? 1.328 ? covale19 covale both ? B DCY 19 C ? ? ? 1_555 B DTH 20 N ? ? B DCY 19 B DTH 20 1_555 ? ? ? ? ? ? ? 1.325 ? covale20 covale both ? B DTH 20 C ? ? ? 1_555 B DCY 21 N ? ? B DTH 20 B DCY 21 1_555 ? ? ? ? ? ? ? 1.328 ? covale21 covale both ? B DCY 21 C ? ? ? 1_555 B DSN 22 N ? ? B DCY 21 B DSN 22 1_555 ? ? ? ? ? ? ? 1.330 ? covale22 covale both ? B DSN 22 C ? ? ? 1_555 B DTR 23 N ? ? B DSN 22 B DTR 23 1_555 ? ? ? ? ? ? ? 1.325 ? covale23 covale both ? B DTR 23 C ? ? ? 1_555 B DPR 24 N ? ? B DTR 23 B DPR 24 1_555 ? ? ? ? ? ? ? 1.346 ? covale24 covale both ? B DPR 24 C ? ? ? 1_555 B DVA 25 N ? ? B DPR 24 B DVA 25 1_555 ? ? ? ? ? ? ? 1.331 ? covale25 covale both ? B DVA 25 C ? ? ? 1_555 B DCY 26 N ? ? B DVA 25 B DCY 26 1_555 ? ? ? ? ? ? ? 1.325 ? covale26 covale both ? B DCY 26 C ? ? ? 1_555 B DTH 27 N ? ? B DCY 26 B DTH 27 1_555 ? ? ? ? ? ? ? 1.323 ? covale27 covale both ? B DTH 27 C ? ? ? 1_555 B DAR 28 N ? ? B DTH 27 B DAR 28 1_555 ? ? ? ? ? ? ? 1.329 ? covale28 covale both ? B DAR 28 C ? ? ? 1_555 B DSG 29 N ? ? B DAR 28 B DSG 29 1_555 ? ? ? ? ? ? ? 1.327 ? covale29 covale ? ? A GLY 1 N ? ? ? 1_555 A ASN 29 C ? ? A GLY 1 A ASN 29 1_555 ? ? ? ? ? ? ? 1.368 sing # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TRP 23 A . ? TRP 23 A PRO 24 A ? PRO 24 A 1 5.36 2 DTR 23 B . ? DTR 23 B DPR 24 B ? DPR 24 B 1 -7.16 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 20 ? SER A 22 ? THR A 20 SER A 22 AA1 2 VAL A 25 ? THR A 27 ? VAL A 25 THR A 27 AA2 1 DTH B 20 ? DSN B 22 ? DTH B 20 DSN B 22 AA2 2 DVA B 25 ? DTH B 27 ? DVA B 25 DTH B 27 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 20 ? N THR A 20 O THR A 27 ? O THR A 27 AA2 1 2 N DTH B 20 ? N DTH B 20 O DTH B 27 ? O DTH B 27 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id MPD _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'binding site for residue MPD B 101' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id DVA _struct_site_gen.label_asym_id B _struct_site_gen.label_seq_id 4 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id DVA _struct_site_gen.auth_asym_id B _struct_site_gen.auth_seq_id 4 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _atom_sites.entry_id 4TTN _atom_sites.fract_transf_matrix[1][1] 0.045073 _atom_sites.fract_transf_matrix[1][2] 0.007871 _atom_sites.fract_transf_matrix[1][3] 0.014500 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.039159 _atom_sites.fract_transf_matrix[2][3] 0.004822 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027877 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 CYS 19 19 19 CYS CYS A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ASN 29 29 29 ASN ASN A . n B 2 1 GLY 1 1 1 GLY GLY B . n B 2 2 DLE 2 2 2 DLE DLE B . n B 2 3 DPR 3 3 3 DPR DPR B . n B 2 4 DVA 4 4 4 DVA DVA B . n B 2 5 DCY 5 5 5 DCY DCY B . n B 2 6 GLY 6 6 6 GLY GLY B . n B 2 7 DGL 7 7 7 DGL DGL B . n B 2 8 DTH 8 8 8 DTH DTH B . n B 2 9 DCY 9 9 9 DCY DCY B . n B 2 10 DVA 10 10 10 DVA DVA B . n B 2 11 GLY 11 11 11 GLY GLY B . n B 2 12 GLY 12 12 12 GLY GLY B . n B 2 13 DTH 13 13 13 DTH DTH B . n B 2 14 DCY 14 14 14 DCY DCY B . n B 2 15 DSG 15 15 15 DSG DSG B . n B 2 16 DTH 16 16 16 DTH DTH B . n B 2 17 DPR 17 17 17 DPR DPR B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 DCY 19 19 19 DCY DCY B . n B 2 20 DTH 20 20 20 DTH DTH B . n B 2 21 DCY 21 21 21 DCY DCY B . n B 2 22 DSN 22 22 22 DSN DSN B . n B 2 23 DTR 23 23 23 DTR DTR B . n B 2 24 DPR 24 24 24 DPR DPR B . n B 2 25 DVA 25 25 25 DVA DVA B . n B 2 26 DCY 26 26 26 DCY DCY B . n B 2 27 DTH 27 27 27 DTH DTH B . n B 2 28 DAR 28 28 28 DAR DAR B . n B 2 29 DSG 29 29 29 DSG DSG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MPD 1 101 1 MPD MPD B . D 4 HOH 1 101 56 HOH HOH A . D 4 HOH 2 102 23 HOH HOH A . D 4 HOH 3 103 30 HOH HOH A . D 4 HOH 4 104 42 HOH HOH A . D 4 HOH 5 105 45 HOH HOH A . D 4 HOH 6 106 26 HOH HOH A . D 4 HOH 7 107 40 HOH HOH A . D 4 HOH 8 108 31 HOH HOH A . D 4 HOH 9 109 53 HOH HOH A . D 4 HOH 10 110 34 HOH HOH A . D 4 HOH 11 111 46 HOH HOH A . D 4 HOH 12 112 22 HOH HOH A . D 4 HOH 13 113 18 HOH HOH A . D 4 HOH 14 114 33 HOH HOH A . D 4 HOH 15 115 24 HOH HOH A . D 4 HOH 16 116 62 HOH HOH A . D 4 HOH 17 117 19 HOH HOH A . D 4 HOH 18 118 38 HOH HOH A . D 4 HOH 19 119 48 HOH HOH A . D 4 HOH 20 120 36 HOH HOH A . D 4 HOH 21 121 10 HOH HOH A . D 4 HOH 22 122 43 HOH HOH A . D 4 HOH 23 123 59 HOH HOH A . D 4 HOH 24 124 1 HOH HOH A . D 4 HOH 25 125 3 HOH HOH A . D 4 HOH 26 126 6 HOH HOH A . D 4 HOH 27 127 9 HOH HOH A . D 4 HOH 28 128 15 HOH HOH A . D 4 HOH 29 129 20 HOH HOH A . D 4 HOH 30 130 29 HOH HOH A . D 4 HOH 31 131 41 HOH HOH A . D 4 HOH 32 132 55 HOH HOH A . E 4 HOH 1 201 39 HOH HOH B . E 4 HOH 2 202 58 HOH HOH B . E 4 HOH 3 203 51 HOH HOH B . E 4 HOH 4 204 16 HOH HOH B . E 4 HOH 5 205 2 HOH HOH B . E 4 HOH 6 206 4 HOH HOH B . E 4 HOH 7 207 5 HOH HOH B . E 4 HOH 8 208 25 HOH HOH B . E 4 HOH 9 209 21 HOH HOH B . E 4 HOH 10 210 35 HOH HOH B . E 4 HOH 11 211 17 HOH HOH B . E 4 HOH 12 212 47 HOH HOH B . E 4 HOH 13 213 13 HOH HOH B . E 4 HOH 14 214 54 HOH HOH B . E 4 HOH 15 215 14 HOH HOH B . E 4 HOH 16 216 60 HOH HOH B . E 4 HOH 17 217 49 HOH HOH B . E 4 HOH 18 218 7 HOH HOH B . E 4 HOH 19 219 8 HOH HOH B . E 4 HOH 20 220 11 HOH HOH B . E 4 HOH 21 221 12 HOH HOH B . E 4 HOH 22 222 27 HOH HOH B . E 4 HOH 23 223 28 HOH HOH B . E 4 HOH 24 224 32 HOH HOH B . E 4 HOH 25 225 37 HOH HOH B . E 4 HOH 26 226 44 HOH HOH B . E 4 HOH 27 227 50 HOH HOH B . E 4 HOH 28 228 52 HOH HOH B . E 4 HOH 29 229 57 HOH HOH B . E 4 HOH 30 230 61 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D 2 1 B,C,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-10 2 'Structure model' 1 1 2014-10-22 3 'Structure model' 1 2 2015-02-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Derived calculations' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: 1.9_1692)' 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.14 2 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 129 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 226 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 115 ? ? 1_555 O B HOH 203 ? ? 2_8710 2.12 2 1 O A HOH 101 ? ? 1_555 O B HOH 208 ? ? 1_565 2.14 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id DCY _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 9 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 140.96 _pdbx_validate_torsion.psi -56.25 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 water HOH #