HEADER RNA BINDING PROTEIN/DNA 24-JUN-14 4TU9 TITLE STRUCTURE OF U2AF65 VARIANT WITH BRU5G6 DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPLICING FACTOR U2AF 65 KDA SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 148-336; COMPND 5 SYNONYM: U2 AUXILIARY FACTOR 65 KDA SUBUNIT,HU2AF65,U2 SNRNP COMPND 6 AUXILIARY FACTOR LARGE SUBUNIT; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(*UP*UP*UP*UP*(BRU)P*DG*U)-3'); COMPND 10 CHAIN: P, E; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: U2AF2, U2AF65; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS RNA SPLICING FACTOR, RNA RECOGNITION MOTIF, RNA BINDING PROTEIN, RNA KEYWDS 2 BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.L.JENKINS,K.J.MCLAUGHLIN,A.A.AGRAWAL,C.L.KIELKOPF REVDAT 7 27-DEC-23 4TU9 1 REMARK REVDAT 6 25-DEC-19 4TU9 1 REMARK REVDAT 5 20-SEP-17 4TU9 1 REMARK REVDAT 4 02-DEC-15 4TU9 1 AUTHOR REVDAT 3 24-DEC-14 4TU9 1 JRNL REVDAT 2 10-DEC-14 4TU9 1 JRNL REVDAT 1 26-NOV-14 4TU9 0 JRNL AUTH A.A.AGRAWAL,K.J.MCLAUGHLIN,J.L.JENKINS,C.L.KIELKOPF JRNL TITL STRUCTURE-GUIDED U2AF65 VARIANT IMPROVES RECOGNITION AND JRNL TITL 2 SPLICING OF A DEFECTIVE PRE-MRNA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 17420 2014 JRNL REFN ESSN 1091-6490 JRNL PMID 25422459 JRNL DOI 10.1073/PNAS.1412743111 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 33921 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.910 REMARK 3 FREE R VALUE TEST SET COUNT : 3362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0725 - 5.7328 0.96 1357 137 0.1968 0.2025 REMARK 3 2 5.7328 - 4.5559 0.99 1331 138 0.1609 0.1987 REMARK 3 3 4.5559 - 3.9817 1.00 1322 137 0.1395 0.1592 REMARK 3 4 3.9817 - 3.6184 0.99 1292 145 0.1493 0.1912 REMARK 3 5 3.6184 - 3.3594 0.99 1288 143 0.1651 0.1994 REMARK 3 6 3.3594 - 3.1616 1.00 1294 159 0.1820 0.2364 REMARK 3 7 3.1616 - 3.0034 1.00 1276 151 0.1870 0.2299 REMARK 3 8 3.0034 - 2.8728 1.00 1307 146 0.1841 0.2710 REMARK 3 9 2.8728 - 2.7623 0.99 1280 149 0.2089 0.2573 REMARK 3 10 2.7623 - 2.6671 0.99 1284 135 0.2059 0.2734 REMARK 3 11 2.6671 - 2.5837 0.99 1312 134 0.2020 0.2723 REMARK 3 12 2.5837 - 2.5099 1.00 1244 167 0.2030 0.2335 REMARK 3 13 2.5099 - 2.4439 1.00 1300 130 0.1868 0.2521 REMARK 3 14 2.4439 - 2.3843 1.00 1279 148 0.1977 0.2519 REMARK 3 15 2.3843 - 2.3301 1.00 1289 127 0.1974 0.2937 REMARK 3 16 2.3301 - 2.2805 0.99 1265 145 0.2030 0.2739 REMARK 3 17 2.2805 - 2.2349 0.95 1246 143 0.2960 0.4050 REMARK 3 18 2.2349 - 2.1928 0.99 1227 141 0.2305 0.2662 REMARK 3 19 2.1928 - 2.1536 0.99 1309 136 0.2207 0.2747 REMARK 3 20 2.1536 - 2.1171 0.99 1274 133 0.2249 0.2847 REMARK 3 21 2.1171 - 2.0830 0.99 1272 136 0.2350 0.2879 REMARK 3 22 2.0830 - 2.0509 0.95 1246 119 0.3154 0.4043 REMARK 3 23 2.0509 - 2.0208 0.99 1278 147 0.2572 0.3006 REMARK 3 24 2.0208 - 1.9920 0.78 987 116 0.2567 0.3243 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3180 REMARK 3 ANGLE : 1.205 4355 REMARK 3 CHIRALITY : 0.045 473 REMARK 3 PLANARITY : 0.004 516 REMARK 3 DIHEDRAL : 20.070 1296 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4TU9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202285. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33992 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.992 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4210 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.44500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE, 10% DIOXANE, REMARK 280 0.1M MES PH 6.5, DEOXY-BIG CHAP, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 82.24400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.59150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 82.24400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.59150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 543 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DU P 7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DU E 7 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DU E 7 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DU E 7 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DU E 2 O3' DU E 2 C3' -0.038 REMARK 500 BRU E 5 O3' DG E 6 P -0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DU E 2 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DU E 3 O5' - C5' - C4' ANGL. DEV. = -4.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CPQ B 403 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DIO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CPQ B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4TU7 RELATED DB: PDB REMARK 900 RELATED ID: 4TU8 RELATED DB: PDB DBREF 4TU9 A 148 336 UNP P26368 U2AF2_HUMAN 148 336 DBREF 4TU9 B 148 336 UNP P26368 U2AF2_HUMAN 148 336 DBREF 4TU9 P 1 7 PDB 4TU9 4TU9 1 7 DBREF 4TU9 E 1 7 PDB 4TU9 4TU9 1 7 SEQADV 4TU9 GLY A 143 UNP P26368 EXPRESSION TAG SEQADV 4TU9 PRO A 144 UNP P26368 EXPRESSION TAG SEQADV 4TU9 LEU A 145 UNP P26368 EXPRESSION TAG SEQADV 4TU9 GLY A 146 UNP P26368 EXPRESSION TAG SEQADV 4TU9 SER A 147 UNP P26368 EXPRESSION TAG SEQADV 4TU9 A UNP P26368 MET 238 DELETION SEQADV 4TU9 A UNP P26368 SER 239 DELETION SEQADV 4TU9 A UNP P26368 GLU 240 DELETION SEQADV 4TU9 A UNP P26368 ASN 241 DELETION SEQADV 4TU9 A UNP P26368 PRO 242 DELETION SEQADV 4TU9 A UNP P26368 SER 243 DELETION SEQADV 4TU9 A UNP P26368 VAL 244 DELETION SEQADV 4TU9 A UNP P26368 TYR 245 DELETION SEQADV 4TU9 A UNP P26368 VAL 246 DELETION SEQADV 4TU9 A UNP P26368 PRO 247 DELETION SEQADV 4TU9 A UNP P26368 GLY 248 DELETION SEQADV 4TU9 A UNP P26368 VAL 249 DELETION SEQADV 4TU9 A UNP P26368 VAL 250 DELETION SEQADV 4TU9 A UNP P26368 SER 251 DELETION SEQADV 4TU9 A UNP P26368 THR 252 DELETION SEQADV 4TU9 A UNP P26368 VAL 253 DELETION SEQADV 4TU9 A UNP P26368 VAL 254 DELETION SEQADV 4TU9 A UNP P26368 PRO 255 DELETION SEQADV 4TU9 A UNP P26368 ASP 256 DELETION SEQADV 4TU9 A UNP P26368 SER 257 DELETION SEQADV 4TU9 GLY B 143 UNP P26368 EXPRESSION TAG SEQADV 4TU9 PRO B 144 UNP P26368 EXPRESSION TAG SEQADV 4TU9 LEU B 145 UNP P26368 EXPRESSION TAG SEQADV 4TU9 GLY B 146 UNP P26368 EXPRESSION TAG SEQADV 4TU9 SER B 147 UNP P26368 EXPRESSION TAG SEQADV 4TU9 B UNP P26368 MET 238 DELETION SEQADV 4TU9 B UNP P26368 SER 239 DELETION SEQADV 4TU9 B UNP P26368 GLU 240 DELETION SEQADV 4TU9 B UNP P26368 ASN 241 DELETION SEQADV 4TU9 B UNP P26368 PRO 242 DELETION SEQADV 4TU9 B UNP P26368 SER 243 DELETION SEQADV 4TU9 B UNP P26368 VAL 244 DELETION SEQADV 4TU9 B UNP P26368 TYR 245 DELETION SEQADV 4TU9 B UNP P26368 VAL 246 DELETION SEQADV 4TU9 B UNP P26368 PRO 247 DELETION SEQADV 4TU9 B UNP P26368 GLY 248 DELETION SEQADV 4TU9 B UNP P26368 VAL 249 DELETION SEQADV 4TU9 B UNP P26368 VAL 250 DELETION SEQADV 4TU9 B UNP P26368 SER 251 DELETION SEQADV 4TU9 B UNP P26368 THR 252 DELETION SEQADV 4TU9 B UNP P26368 VAL 253 DELETION SEQADV 4TU9 B UNP P26368 VAL 254 DELETION SEQADV 4TU9 B UNP P26368 PRO 255 DELETION SEQADV 4TU9 B UNP P26368 ASP 256 DELETION SEQADV 4TU9 B UNP P26368 SER 257 DELETION SEQRES 1 A 174 GLY PRO LEU GLY SER ALA ARG ARG LEU TYR VAL GLY ASN SEQRES 2 A 174 ILE PRO PHE GLY ILE THR GLU GLU ALA MET MET ASP PHE SEQRES 3 A 174 PHE ASN ALA GLN MET ARG LEU GLY GLY LEU THR GLN ALA SEQRES 4 A 174 PRO GLY ASN PRO VAL LEU ALA VAL GLN ILE ASN GLN ASP SEQRES 5 A 174 LYS ASN PHE ALA PHE LEU GLU PHE ARG SER VAL ASP GLU SEQRES 6 A 174 THR THR GLN ALA MET ALA PHE ASP GLY ILE ILE PHE GLN SEQRES 7 A 174 GLY GLN SER LEU LYS ILE ARG ARG PRO HIS ASP TYR GLN SEQRES 8 A 174 PRO LEU PRO GLY ALA HIS LYS LEU PHE ILE GLY GLY LEU SEQRES 9 A 174 PRO ASN TYR LEU ASN ASP ASP GLN VAL LYS GLU LEU LEU SEQRES 10 A 174 THR SER PHE GLY PRO LEU LYS ALA PHE ASN LEU VAL LYS SEQRES 11 A 174 ASP SER ALA THR GLY LEU SER LYS GLY TYR ALA PHE CYS SEQRES 12 A 174 GLU TYR VAL ASP ILE ASN VAL THR ASP GLN ALA ILE ALA SEQRES 13 A 174 GLY LEU ASN GLY MET GLN LEU GLY ASP LYS LYS LEU LEU SEQRES 14 A 174 VAL GLN ARG ALA SER SEQRES 1 B 174 GLY PRO LEU GLY SER ALA ARG ARG LEU TYR VAL GLY ASN SEQRES 2 B 174 ILE PRO PHE GLY ILE THR GLU GLU ALA MET MET ASP PHE SEQRES 3 B 174 PHE ASN ALA GLN MET ARG LEU GLY GLY LEU THR GLN ALA SEQRES 4 B 174 PRO GLY ASN PRO VAL LEU ALA VAL GLN ILE ASN GLN ASP SEQRES 5 B 174 LYS ASN PHE ALA PHE LEU GLU PHE ARG SER VAL ASP GLU SEQRES 6 B 174 THR THR GLN ALA MET ALA PHE ASP GLY ILE ILE PHE GLN SEQRES 7 B 174 GLY GLN SER LEU LYS ILE ARG ARG PRO HIS ASP TYR GLN SEQRES 8 B 174 PRO LEU PRO GLY ALA HIS LYS LEU PHE ILE GLY GLY LEU SEQRES 9 B 174 PRO ASN TYR LEU ASN ASP ASP GLN VAL LYS GLU LEU LEU SEQRES 10 B 174 THR SER PHE GLY PRO LEU LYS ALA PHE ASN LEU VAL LYS SEQRES 11 B 174 ASP SER ALA THR GLY LEU SER LYS GLY TYR ALA PHE CYS SEQRES 12 B 174 GLU TYR VAL ASP ILE ASN VAL THR ASP GLN ALA ILE ALA SEQRES 13 B 174 GLY LEU ASN GLY MET GLN LEU GLY ASP LYS LYS LEU LEU SEQRES 14 B 174 VAL GLN ARG ALA SER SEQRES 1 P 7 DU DU DU DU BRU DG DU SEQRES 1 E 7 DU DU DU DU BRU DG DU HET BRU P 5 20 HET BRU E 5 20 HET DIO A 401 6 HET DIO A 402 6 HET DIO A 403 6 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET GOL A 407 6 HET DIO B 401 6 HET DIO B 402 6 HET CPQ B 403 27 HET SO4 B 404 5 HET SO4 B 405 5 HET SO4 B 406 5 HET GOL B 407 6 HETNAM BRU 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE HETNAM DIO 1,4-DIETHYLENE DIOXIDE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM CPQ N,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN CPQ DEOXY-BIGCHAP FORMUL 3 BRU 2(C9 H12 BR N2 O8 P) FORMUL 5 DIO 5(C4 H8 O2) FORMUL 8 SO4 6(O4 S 2-) FORMUL 11 GOL 2(C3 H8 O3) FORMUL 14 CPQ C42 H75 N3 O15 FORMUL 19 HOH *265(H2 O) HELIX 1 AA1 THR A 161 GLY A 176 1 16 HELIX 2 AA2 SER A 204 MET A 212 1 9 HELIX 3 AA3 ALA A 213 ASP A 215 5 3 HELIX 4 AA4 ASN A 271 SER A 281 1 11 HELIX 5 AA5 ASN A 311 ASN A 321 1 11 HELIX 6 AA6 LEU B 145 ALA B 148 5 4 HELIX 7 AA7 THR B 161 GLY B 176 1 16 HELIX 8 AA8 SER B 204 MET B 212 1 9 HELIX 9 AA9 ALA B 213 ASP B 215 5 3 HELIX 10 AB1 ASN B 271 SER B 281 1 11 HELIX 11 AB2 ASP B 309 ASN B 311 5 3 HELIX 12 AB3 VAL B 312 ASN B 321 1 10 SHEET 1 AA1 4 VAL A 186 ASN A 192 0 SHEET 2 AA1 4 PHE A 197 PHE A 202 -1 O GLU A 201 N ALA A 188 SHEET 3 AA1 4 ARG A 150 GLY A 154 -1 N VAL A 153 O ALA A 198 SHEET 4 AA1 4 LYS A 225 ARG A 227 -1 O LYS A 225 N GLY A 154 SHEET 1 AA2 2 ILE A 218 PHE A 219 0 SHEET 2 AA2 2 GLN A 222 SER A 223 -1 O GLN A 222 N PHE A 219 SHEET 1 AA3 4 LEU A 285 LYS A 292 0 SHEET 2 AA3 4 SER A 299 TYR A 307 -1 O LYS A 300 N VAL A 291 SHEET 3 AA3 4 LEU A 261 GLY A 264 -1 N ILE A 263 O ALA A 303 SHEET 4 AA3 4 LEU A 331 ARG A 334 -1 O GLN A 333 N PHE A 262 SHEET 1 AA4 2 GLN A 324 LEU A 325 0 SHEET 2 AA4 2 LYS A 328 LYS A 329 -1 O LYS A 328 N LEU A 325 SHEET 1 AA5 4 VAL B 186 ASN B 192 0 SHEET 2 AA5 4 PHE B 197 PHE B 202 -1 O GLU B 201 N ALA B 188 SHEET 3 AA5 4 ARG B 150 GLY B 154 -1 N VAL B 153 O ALA B 198 SHEET 4 AA5 4 LYS B 225 ARG B 227 -1 O LYS B 225 N GLY B 154 SHEET 1 AA6 2 ILE B 218 PHE B 219 0 SHEET 2 AA6 2 GLN B 222 SER B 223 -1 O GLN B 222 N PHE B 219 SHEET 1 AA7 4 LEU B 285 LYS B 292 0 SHEET 2 AA7 4 SER B 299 TYR B 307 -1 O LYS B 300 N VAL B 291 SHEET 3 AA7 4 LEU B 261 GLY B 264 -1 N ILE B 263 O ALA B 303 SHEET 4 AA7 4 LEU B 331 ARG B 334 -1 O GLN B 333 N PHE B 262 SHEET 1 AA8 2 GLN B 324 LEU B 325 0 SHEET 2 AA8 2 LYS B 328 LYS B 329 -1 O LYS B 328 N LEU B 325 LINK O3' DU P 4 P BRU P 5 1555 1555 1.60 LINK O3' BRU P 5 P DG P 6 1555 1555 1.61 LINK O3' DU E 4 P BRU E 5 1555 1555 1.60 LINK O3' BRU E 5 P A DG E 6 1555 1555 1.52 LINK O3' BRU E 5 P B DG E 6 1555 1555 1.61 SITE 1 AC1 5 ASN A 268 ASN A 271 GLY A 297 LEU A 298 SITE 2 AC1 5 SER A 299 SITE 1 AC2 5 PRO A 144 ALA A 148 TYR A 232 GLN A 233 SITE 2 AC2 5 LEU A 325 SITE 1 AC3 2 LEU A 285 LYS A 286 SITE 1 AC4 4 LYS A 225 ARG A 227 HOH A 608 HOH A 610 SITE 1 AC5 7 GLY A 146 SER A 147 ARG A 150 SER A 281 SITE 2 AC5 7 HOH A 502 HOH A 513 HOH A 515 SITE 1 AC6 3 MET A 212 ARG A 228 HOH A 596 SITE 1 AC7 4 ILE A 191 ASN A 192 GLN A 193 ASP A 194 SITE 1 AC8 4 LYS B 276 LEU B 285 LYS B 286 PHE B 288 SITE 1 AC9 7 ASN B 268 TYR B 269 LEU B 270 ASN B 271 SITE 2 AC9 7 GLY B 297 LEU B 298 SER B 299 SITE 1 AD1 3 TYR B 269 GLN B 274 GLY B 326 SITE 1 AD2 4 ARG B 149 SER B 204 VAL B 205 HOH B 538 SITE 1 AD3 4 ARG A 174 LYS B 225 ARG B 227 HOH B 514 SITE 1 AD4 2 ARG B 228 HOH B 606 SITE 1 AD5 2 GLN B 190 PHE B 199 CRYST1 164.488 37.183 101.047 90.00 125.57 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006079 0.000000 0.004348 0.00000 SCALE2 0.000000 0.026894 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012167 0.00000