HEADER TRANSCRIPTION 26-JUN-14 4TV7 TITLE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS GABR AT 2.05 ANGSTROMS TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATORY PROTEIN GABR; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: LYS312 MAKES A SCHIFF BASE WITH PLP. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS 168; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 GENE: GABR, YCNF, BSU03890; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TOP10; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD18 KEYWDS TRANSCRIPTIONAL REGULATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.GOTO,K.OKUDA,T.YOSHIMURA REVDAT 3 29-JAN-20 4TV7 1 REMARK REVDAT 2 15-MAR-17 4TV7 1 JRNL REVDAT 1 24-DEC-14 4TV7 0 JRNL AUTH K.OKUDA,S.KATO,T.ITO,S.SHIRAKI,Y.KAWASE,M.GOTO,S.KAWASHIMA, JRNL AUTH 2 H.HEMMI,H.FUKADA,T.YOSHIMURA JRNL TITL ROLE OF THE AMINOTRANSFERASE DOMAIN IN BACILLUS SUBTILIS JRNL TITL 2 GABR, A PYRIDOXAL 5'-PHOSPHATE-DEPENDENT TRANSCRIPTIONAL JRNL TITL 3 REGULATOR JRNL REF MOL. MICROBIOL. V. 95 245 2015 JRNL REFN ESSN 1365-2958 JRNL PMID 25388514 JRNL DOI 10.1111/MMI.12861 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REFMAC_5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 123479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.284 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6564 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 563 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.59000 REMARK 3 B22 (A**2) : -0.40000 REMARK 3 B33 (A**2) : -0.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.229 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.205 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4TV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202308. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 130131 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SOLVE, RESOLVE 2.13 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 1000, PEG 400, ETHYLENEGLYCOL, REMARK 280 CALCIUM ACETATE, TRIS-HCL, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.91550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.49350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.77800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 106.49350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.91550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.77800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ILE A 3 REMARK 465 GLU A 88 REMARK 465 GLU A 89 REMARK 465 HIS A 90 REMARK 465 PRO A 91 REMARK 465 PRO A 92 REMARK 465 PHE A 93 REMARK 465 ASP A 105 REMARK 465 GLN A 106 REMARK 465 SER A 107 REMARK 465 ASP A 108 REMARK 465 SER A 116 REMARK 465 SER A 117 REMARK 465 ARG A 140 REMARK 465 THR A 141 REMARK 465 LEU A 142 REMARK 465 GLY A 143 REMARK 465 ASP A 144 REMARK 465 PHE A 405 REMARK 465 ASN A 432 REMARK 465 LEU A 433 REMARK 465 LYS A 434 REMARK 465 GLU A 435 REMARK 465 ASN A 436 REMARK 465 LYS A 437 REMARK 465 ARG A 438 REMARK 465 GLN A 439 REMARK 465 THR A 440 REMARK 465 GLY A 441 REMARK 465 LEU A 464 REMARK 465 PHE A 465 REMARK 465 LYS A 466 REMARK 465 ALA A 467 REMARK 465 VAL A 468 REMARK 465 TYR A 469 REMARK 465 GLY A 470 REMARK 465 HIS A 471 REMARK 465 LYS A 472 REMARK 465 LYS A 473 REMARK 465 ILE A 474 REMARK 465 PRO A 475 REMARK 465 VAL A 476 REMARK 465 THR A 477 REMARK 465 GLY A 478 REMARK 465 ASP A 479 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 ILE B 3 REMARK 465 THR B 4 REMARK 465 ILE B 5 REMARK 465 THR B 6 REMARK 465 LEU B 7 REMARK 465 ASP B 8 REMARK 465 LYS B 38 REMARK 465 ASN B 48 REMARK 465 LEU B 49 REMARK 465 ILE B 72 REMARK 465 GLU B 73 REMARK 465 ARG B 74 REMARK 465 ALA B 87 REMARK 465 GLU B 88 REMARK 465 GLU B 89 REMARK 465 HIS B 90 REMARK 465 PRO B 91 REMARK 465 PRO B 92 REMARK 465 PHE B 93 REMARK 465 ALA B 94 REMARK 465 HIS B 103 REMARK 465 ILE B 104 REMARK 465 ASP B 105 REMARK 465 GLN B 106 REMARK 465 SER B 138 REMARK 465 TYR B 139 REMARK 465 ARG B 140 REMARK 465 THR B 141 REMARK 465 LEU B 142 REMARK 465 GLY B 143 REMARK 465 ASP B 144 REMARK 465 MET B 145 REMARK 465 SER B 146 REMARK 465 LYS B 434 REMARK 465 GLU B 435 REMARK 465 ASN B 436 REMARK 465 LYS B 437 REMARK 465 ARG B 438 REMARK 465 GLN B 439 REMARK 465 THR B 440 REMARK 465 GLY B 441 REMARK 465 ILE B 474 REMARK 465 PRO B 475 REMARK 465 VAL B 476 REMARK 465 THR B 477 REMARK 465 GLY B 478 REMARK 465 ASP B 479 REMARK 465 MET C 1 REMARK 465 ASP C 2 REMARK 465 ILE C 3 REMARK 465 ALA C 87 REMARK 465 GLU C 88 REMARK 465 GLU C 89 REMARK 465 HIS C 90 REMARK 465 PRO C 91 REMARK 465 PRO C 92 REMARK 465 PHE C 93 REMARK 465 ILE C 104 REMARK 465 GLY C 143 REMARK 465 ASP C 144 REMARK 465 LYS C 434 REMARK 465 GLU C 435 REMARK 465 ASN C 436 REMARK 465 LYS C 437 REMARK 465 ARG C 438 REMARK 465 GLN C 439 REMARK 465 THR C 440 REMARK 465 GLY C 441 REMARK 465 ILE C 474 REMARK 465 PRO C 475 REMARK 465 VAL C 476 REMARK 465 THR C 477 REMARK 465 GLY C 478 REMARK 465 ASP C 479 REMARK 465 MET D 1 REMARK 465 ASP D 2 REMARK 465 ILE D 3 REMARK 465 THR D 4 REMARK 465 GLU D 89 REMARK 465 HIS D 90 REMARK 465 PRO D 91 REMARK 465 PRO D 92 REMARK 465 ILE D 104 REMARK 465 ASP D 105 REMARK 465 GLN D 106 REMARK 465 LEU D 142 REMARK 465 GLY D 143 REMARK 465 ASP D 144 REMARK 465 MET D 145 REMARK 465 GLU D 435 REMARK 465 ASN D 436 REMARK 465 LYS D 437 REMARK 465 ARG D 438 REMARK 465 GLN D 439 REMARK 465 THR D 440 REMARK 465 GLY D 441 REMARK 465 LYS D 472 REMARK 465 LYS D 473 REMARK 465 ILE D 474 REMARK 465 PRO D 475 REMARK 465 VAL D 476 REMARK 465 THR D 477 REMARK 465 GLY D 478 REMARK 465 ASP D 479 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 ARG A 31 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 34 CG CD1 CD2 REMARK 470 GLU A 47 CG CD OE1 OE2 REMARK 470 ASN A 48 CG OD1 ND2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 PHE A 85 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 86 OG REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 ASP A 118 CG OD1 OD2 REMARK 470 THR A 119 OG1 CG2 REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 GLN A 132 CG CD OE1 NE2 REMARK 470 SER A 136 OG REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 ARG A 273 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 335 CG CD OE1 NE2 REMARK 470 LYS A 362 CG CD CE NZ REMARK 470 LYS A 365 CG CD CE NZ REMARK 470 LYS A 366 CG CD CE NZ REMARK 470 GLU A 376 CG CD OE1 OE2 REMARK 470 GLU A 383 CG CD OE1 OE2 REMARK 470 VAL A 390 CG1 CG2 REMARK 470 GLU A 404 CG CD OE1 OE2 REMARK 470 ASP A 406 CG OD1 OD2 REMARK 470 THR A 407 OG1 CG2 REMARK 470 ARG A 408 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 409 CG CD NE CZ NH1 NH2 REMARK 470 THR A 410 OG1 CG2 REMARK 470 GLU A 411 CG CD OE1 OE2 REMARK 470 GLN A 412 CG CD OE1 NE2 REMARK 470 ASP A 413 CG OD1 OD2 REMARK 470 LEU A 415 CG CD1 CD2 REMARK 470 SER A 416 OG REMARK 470 HIS A 417 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 421 CG CD1 CD2 REMARK 470 SER A 429 OG REMARK 470 ARG A 442 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 451 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 454 CG CD OE1 OE2 REMARK 470 GLU A 455 CG CD OE1 OE2 REMARK 470 ASP A 456 CG OD1 OD2 REMARK 470 ILE A 457 CG1 CG2 CD1 REMARK 470 GLN A 462 CG CD OE1 NE2 REMARK 470 GLN B 12 CG CD OE1 NE2 REMARK 470 GLN B 19 CG CD OE1 NE2 REMARK 470 GLU B 27 CG CD OE1 OE2 REMARK 470 LEU B 34 CG CD1 CD2 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 GLU B 47 CG CD OE1 OE2 REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 LEU B 64 CG CD1 CD2 REMARK 470 TYR B 70 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER B 86 OG REMARK 470 ASP B 98 CG OD1 OD2 REMARK 470 ILE B 102 CG1 CG2 CD1 REMARK 470 ASP B 118 CG OD1 OD2 REMARK 470 GLN B 132 CG CD OE1 NE2 REMARK 470 ARG B 137 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 GLN B 218 CG CD OE1 NE2 REMARK 470 LYS B 220 CG CD CE NZ REMARK 470 GLN B 238 CG CD OE1 NE2 REMARK 470 GLU B 271 CG CD OE1 OE2 REMARK 470 ARG B 408 CG CD NE CZ NH1 NH2 REMARK 470 SER B 416 OG REMARK 470 GLN B 422 CG CD OE1 NE2 REMARK 470 ARG B 430 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 433 CG CD1 CD2 REMARK 470 ARG B 442 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 451 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 453 CG CD CE NZ REMARK 470 GLU B 454 CG CD OE1 OE2 REMARK 470 GLU B 455 CG CD OE1 OE2 REMARK 470 LYS B 466 CG CD CE NZ REMARK 470 LYS B 472 CG CD CE NZ REMARK 470 LYS B 473 CG CD CE NZ REMARK 470 GLU C 11 CG CD OE1 OE2 REMARK 470 GLN C 12 CG CD OE1 NE2 REMARK 470 GLU C 47 CG CD OE1 OE2 REMARK 470 SER C 86 OG REMARK 470 TYR C 139 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 169 CG CD CE NZ REMARK 470 LYS C 213 CG CD CE NZ REMARK 470 GLU C 226 CG CD OE1 OE2 REMARK 470 GLU C 270 CG CD OE1 OE2 REMARK 470 LYS C 362 CG CD CE NZ REMARK 470 LYS C 366 CG CD CE NZ REMARK 470 ARG C 408 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 442 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 472 CG CD CE NZ REMARK 470 LYS C 473 CG CD CE NZ REMARK 470 LYS D 38 CG CD CE NZ REMARK 470 ARG D 74 CG CD NE CZ NH1 NH2 REMARK 470 PHE D 93 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS D 103 CG ND1 CD2 CE1 NE2 REMARK 470 ARG D 137 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 140 CG CD NE CZ NH1 NH2 REMARK 470 LEU D 164 CG CD1 CD2 REMARK 470 LYS D 169 CG CD CE NZ REMARK 470 GLU D 270 CG CD OE1 OE2 REMARK 470 LYS D 362 CG CD CE NZ REMARK 470 LYS D 434 CG CD CE NZ REMARK 470 ARG D 442 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 466 CG CD CE NZ REMARK 470 HIS D 471 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 519 O HOH D 660 1.58 REMARK 500 O HOH B 513 O HOH B 592 1.71 REMARK 500 NH1 ARG D 331 O HOH D 658 2.01 REMARK 500 O HOH D 519 O HOH D 644 2.10 REMARK 500 O ILE D 234 O GLN D 237 2.12 REMARK 500 O ILE C 234 O GLN C 237 2.13 REMARK 500 O HOH A 516 O HOH A 565 2.16 REMARK 500 C6 LLP C 312 O HOH C 666 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 211 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 LEU B 315 CA - CB - CG ANGL. DEV. = 14.3 DEGREES REMARK 500 ARG C 155 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG C 155 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU C 211 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 LEU D 211 CA - CB - CG ANGL. DEV. = 15.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 9 -32.96 66.75 REMARK 500 ALA A 13 -37.85 61.39 REMARK 500 ARG A 31 21.46 47.23 REMARK 500 LEU A 34 142.74 56.01 REMARK 500 HIS A 36 -4.70 75.22 REMARK 500 PRO A 40 152.67 -49.58 REMARK 500 SER A 41 160.33 -48.12 REMARK 500 ARG A 74 -39.46 66.34 REMARK 500 ASP A 83 -169.62 -75.79 REMARK 500 SER A 86 22.25 -150.91 REMARK 500 ASP A 120 -148.39 -86.72 REMARK 500 HIS A 121 -20.05 42.08 REMARK 500 SER A 138 -152.46 -101.03 REMARK 500 SER A 146 -47.51 82.58 REMARK 500 ASP A 225 -166.56 -124.21 REMARK 500 HIS A 248 90.22 -171.38 REMARK 500 SER A 252 93.61 -68.32 REMARK 500 GLU A 271 144.46 77.51 REMARK 500 ASP A 282 16.56 -157.48 REMARK 500 SER A 313 18.31 -146.47 REMARK 500 LEU A 314 -159.75 -128.75 REMARK 500 PRO A 316 -76.98 -36.98 REMARK 500 ARG A 336 -76.83 -85.92 REMARK 500 PHE A 386 -96.03 -116.34 REMARK 500 SER A 387 -0.73 63.53 REMARK 500 VAL A 390 30.73 -57.01 REMARK 500 THR A 407 -105.27 -88.27 REMARK 500 ARG A 408 153.55 63.44 REMARK 500 ARG A 451 66.96 -114.89 REMARK 500 ALA B 13 -64.77 77.19 REMARK 500 PRO B 35 152.61 -43.73 REMARK 500 HIS B 36 2.91 48.72 REMARK 500 GLU B 81 89.45 87.48 REMARK 500 SER B 116 -176.78 55.36 REMARK 500 SER B 117 -154.80 -114.18 REMARK 500 THR B 119 57.06 -68.79 REMARK 500 ASP B 120 -98.98 -73.49 REMARK 500 ASP B 225 -168.42 -104.32 REMARK 500 ARG B 236 -73.93 -60.29 REMARK 500 HIS B 248 92.37 -175.97 REMARK 500 GLU B 271 121.88 57.98 REMARK 500 ASP B 282 22.93 -154.00 REMARK 500 LEU B 314 -150.60 -114.78 REMARK 500 SER B 387 -133.13 51.83 REMARK 500 ASP B 406 96.43 -62.05 REMARK 500 THR B 407 -131.88 10.29 REMARK 500 ARG B 408 -101.88 71.29 REMARK 500 ARG B 451 37.12 -93.18 REMARK 500 LYS B 472 -144.34 -110.88 REMARK 500 ARG C 9 -33.36 57.74 REMARK 500 REMARK 500 THIS ENTRY HAS 89 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 519 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH B 620 DISTANCE = 5.97 ANGSTROMS DBREF 4TV7 A 1 479 UNP P94426 GABR_BACSU 1 479 DBREF 4TV7 B 1 479 UNP P94426 GABR_BACSU 1 479 DBREF 4TV7 C 1 479 UNP P94426 GABR_BACSU 1 479 DBREF 4TV7 D 1 479 UNP P94426 GABR_BACSU 1 479 SEQRES 1 A 479 MET ASP ILE THR ILE THR LEU ASP ARG SER GLU GLN ALA SEQRES 2 A 479 ASP TYR ILE TYR GLN GLN ILE TYR GLN LYS LEU LYS LYS SEQRES 3 A 479 GLU ILE LEU SER ARG ASN LEU LEU PRO HIS SER LYS VAL SEQRES 4 A 479 PRO SER LYS ARG GLU LEU ALA GLU ASN LEU LYS VAL SER SEQRES 5 A 479 VAL ASN SER VAL ASN SER ALA TYR GLN GLN LEU LEU ALA SEQRES 6 A 479 GLU GLY TYR LEU TYR ALA ILE GLU ARG LYS GLY PHE PHE SEQRES 7 A 479 VAL GLU GLU LEU ASP MET PHE SER ALA GLU GLU HIS PRO SEQRES 8 A 479 PRO PHE ALA LEU PRO ASP ASP LEU LYS GLU ILE HIS ILE SEQRES 9 A 479 ASP GLN SER ASP TRP ILE SER PHE SER HIS MET SER SER SEQRES 10 A 479 ASP THR ASP HIS PHE PRO ILE LYS SER TRP PHE ARG CYS SEQRES 11 A 479 GLU GLN LYS ALA ALA SER ARG SER TYR ARG THR LEU GLY SEQRES 12 A 479 ASP MET SER HIS PRO GLN GLY ILE TYR GLU VAL ARG ALA SEQRES 13 A 479 ALA ILE THR ARG LEU ILE SER LEU THR ARG GLY VAL LYS SEQRES 14 A 479 CYS ARG PRO GLU GLN MET ILE ILE GLY ALA GLY THR GLN SEQRES 15 A 479 VAL LEU MET GLN LEU LEU THR GLU LEU LEU PRO LYS GLU SEQRES 16 A 479 ALA VAL TYR ALA MET GLU GLU PRO GLY TYR ARG ARG MET SEQRES 17 A 479 TYR GLN LEU LEU LYS ASN ALA GLY LYS GLN VAL LYS THR SEQRES 18 A 479 ILE MET LEU ASP GLU LYS GLY MET SER ILE ALA GLU ILE SEQRES 19 A 479 THR ARG GLN GLN PRO ASP VAL LEU VAL THR THR PRO SER SEQRES 20 A 479 HIS GLN PHE PRO SER GLY THR ILE MET PRO VAL SER ARG SEQRES 21 A 479 ARG ILE GLN LEU LEU ASN TRP ALA ALA GLU GLU PRO ARG SEQRES 22 A 479 ARG TYR ILE ILE GLU ASP ASP TYR ASP SER GLU PHE THR SEQRES 23 A 479 TYR ASP VAL ASP SER ILE PRO ALA LEU GLN SER LEU ASP SEQRES 24 A 479 ARG PHE GLN ASN VAL ILE TYR MET GLY THR PHE SER LLP SEQRES 25 A 479 SER LEU LEU PRO GLY LEU ARG ILE SER TYR MET VAL LEU SEQRES 26 A 479 PRO PRO GLU LEU LEU ARG ALA TYR LYS GLN ARG GLY TYR SEQRES 27 A 479 ASP LEU GLN THR CYS SER SER LEU THR GLN LEU THR LEU SEQRES 28 A 479 GLN GLU PHE ILE GLU SER GLY GLU TYR GLN LYS HIS ILE SEQRES 29 A 479 LYS LYS MET LYS GLN HIS TYR LYS GLU LYS ARG GLU ARG SEQRES 30 A 479 LEU ILE THR ALA LEU GLU ALA GLU PHE SER GLY GLU VAL SEQRES 31 A 479 THR VAL LYS GLY ALA ASN ALA GLY LEU HIS PHE VAL THR SEQRES 32 A 479 GLU PHE ASP THR ARG ARG THR GLU GLN ASP ILE LEU SER SEQRES 33 A 479 HIS ALA ALA GLY LEU GLN LEU GLU ILE PHE GLY MET SER SEQRES 34 A 479 ARG PHE ASN LEU LYS GLU ASN LYS ARG GLN THR GLY ARG SEQRES 35 A 479 PRO ALA LEU ILE ILE GLY PHE ALA ARG LEU LYS GLU GLU SEQRES 36 A 479 ASP ILE GLN GLU GLY VAL GLN ARG LEU PHE LYS ALA VAL SEQRES 37 A 479 TYR GLY HIS LYS LYS ILE PRO VAL THR GLY ASP SEQRES 1 B 479 MET ASP ILE THR ILE THR LEU ASP ARG SER GLU GLN ALA SEQRES 2 B 479 ASP TYR ILE TYR GLN GLN ILE TYR GLN LYS LEU LYS LYS SEQRES 3 B 479 GLU ILE LEU SER ARG ASN LEU LEU PRO HIS SER LYS VAL SEQRES 4 B 479 PRO SER LYS ARG GLU LEU ALA GLU ASN LEU LYS VAL SER SEQRES 5 B 479 VAL ASN SER VAL ASN SER ALA TYR GLN GLN LEU LEU ALA SEQRES 6 B 479 GLU GLY TYR LEU TYR ALA ILE GLU ARG LYS GLY PHE PHE SEQRES 7 B 479 VAL GLU GLU LEU ASP MET PHE SER ALA GLU GLU HIS PRO SEQRES 8 B 479 PRO PHE ALA LEU PRO ASP ASP LEU LYS GLU ILE HIS ILE SEQRES 9 B 479 ASP GLN SER ASP TRP ILE SER PHE SER HIS MET SER SER SEQRES 10 B 479 ASP THR ASP HIS PHE PRO ILE LYS SER TRP PHE ARG CYS SEQRES 11 B 479 GLU GLN LYS ALA ALA SER ARG SER TYR ARG THR LEU GLY SEQRES 12 B 479 ASP MET SER HIS PRO GLN GLY ILE TYR GLU VAL ARG ALA SEQRES 13 B 479 ALA ILE THR ARG LEU ILE SER LEU THR ARG GLY VAL LYS SEQRES 14 B 479 CYS ARG PRO GLU GLN MET ILE ILE GLY ALA GLY THR GLN SEQRES 15 B 479 VAL LEU MET GLN LEU LEU THR GLU LEU LEU PRO LYS GLU SEQRES 16 B 479 ALA VAL TYR ALA MET GLU GLU PRO GLY TYR ARG ARG MET SEQRES 17 B 479 TYR GLN LEU LEU LYS ASN ALA GLY LYS GLN VAL LYS THR SEQRES 18 B 479 ILE MET LEU ASP GLU LYS GLY MET SER ILE ALA GLU ILE SEQRES 19 B 479 THR ARG GLN GLN PRO ASP VAL LEU VAL THR THR PRO SER SEQRES 20 B 479 HIS GLN PHE PRO SER GLY THR ILE MET PRO VAL SER ARG SEQRES 21 B 479 ARG ILE GLN LEU LEU ASN TRP ALA ALA GLU GLU PRO ARG SEQRES 22 B 479 ARG TYR ILE ILE GLU ASP ASP TYR ASP SER GLU PHE THR SEQRES 23 B 479 TYR ASP VAL ASP SER ILE PRO ALA LEU GLN SER LEU ASP SEQRES 24 B 479 ARG PHE GLN ASN VAL ILE TYR MET GLY THR PHE SER LLP SEQRES 25 B 479 SER LEU LEU PRO GLY LEU ARG ILE SER TYR MET VAL LEU SEQRES 26 B 479 PRO PRO GLU LEU LEU ARG ALA TYR LYS GLN ARG GLY TYR SEQRES 27 B 479 ASP LEU GLN THR CYS SER SER LEU THR GLN LEU THR LEU SEQRES 28 B 479 GLN GLU PHE ILE GLU SER GLY GLU TYR GLN LYS HIS ILE SEQRES 29 B 479 LYS LYS MET LYS GLN HIS TYR LYS GLU LYS ARG GLU ARG SEQRES 30 B 479 LEU ILE THR ALA LEU GLU ALA GLU PHE SER GLY GLU VAL SEQRES 31 B 479 THR VAL LYS GLY ALA ASN ALA GLY LEU HIS PHE VAL THR SEQRES 32 B 479 GLU PHE ASP THR ARG ARG THR GLU GLN ASP ILE LEU SER SEQRES 33 B 479 HIS ALA ALA GLY LEU GLN LEU GLU ILE PHE GLY MET SER SEQRES 34 B 479 ARG PHE ASN LEU LYS GLU ASN LYS ARG GLN THR GLY ARG SEQRES 35 B 479 PRO ALA LEU ILE ILE GLY PHE ALA ARG LEU LYS GLU GLU SEQRES 36 B 479 ASP ILE GLN GLU GLY VAL GLN ARG LEU PHE LYS ALA VAL SEQRES 37 B 479 TYR GLY HIS LYS LYS ILE PRO VAL THR GLY ASP SEQRES 1 C 479 MET ASP ILE THR ILE THR LEU ASP ARG SER GLU GLN ALA SEQRES 2 C 479 ASP TYR ILE TYR GLN GLN ILE TYR GLN LYS LEU LYS LYS SEQRES 3 C 479 GLU ILE LEU SER ARG ASN LEU LEU PRO HIS SER LYS VAL SEQRES 4 C 479 PRO SER LYS ARG GLU LEU ALA GLU ASN LEU LYS VAL SER SEQRES 5 C 479 VAL ASN SER VAL ASN SER ALA TYR GLN GLN LEU LEU ALA SEQRES 6 C 479 GLU GLY TYR LEU TYR ALA ILE GLU ARG LYS GLY PHE PHE SEQRES 7 C 479 VAL GLU GLU LEU ASP MET PHE SER ALA GLU GLU HIS PRO SEQRES 8 C 479 PRO PHE ALA LEU PRO ASP ASP LEU LYS GLU ILE HIS ILE SEQRES 9 C 479 ASP GLN SER ASP TRP ILE SER PHE SER HIS MET SER SER SEQRES 10 C 479 ASP THR ASP HIS PHE PRO ILE LYS SER TRP PHE ARG CYS SEQRES 11 C 479 GLU GLN LYS ALA ALA SER ARG SER TYR ARG THR LEU GLY SEQRES 12 C 479 ASP MET SER HIS PRO GLN GLY ILE TYR GLU VAL ARG ALA SEQRES 13 C 479 ALA ILE THR ARG LEU ILE SER LEU THR ARG GLY VAL LYS SEQRES 14 C 479 CYS ARG PRO GLU GLN MET ILE ILE GLY ALA GLY THR GLN SEQRES 15 C 479 VAL LEU MET GLN LEU LEU THR GLU LEU LEU PRO LYS GLU SEQRES 16 C 479 ALA VAL TYR ALA MET GLU GLU PRO GLY TYR ARG ARG MET SEQRES 17 C 479 TYR GLN LEU LEU LYS ASN ALA GLY LYS GLN VAL LYS THR SEQRES 18 C 479 ILE MET LEU ASP GLU LYS GLY MET SER ILE ALA GLU ILE SEQRES 19 C 479 THR ARG GLN GLN PRO ASP VAL LEU VAL THR THR PRO SER SEQRES 20 C 479 HIS GLN PHE PRO SER GLY THR ILE MET PRO VAL SER ARG SEQRES 21 C 479 ARG ILE GLN LEU LEU ASN TRP ALA ALA GLU GLU PRO ARG SEQRES 22 C 479 ARG TYR ILE ILE GLU ASP ASP TYR ASP SER GLU PHE THR SEQRES 23 C 479 TYR ASP VAL ASP SER ILE PRO ALA LEU GLN SER LEU ASP SEQRES 24 C 479 ARG PHE GLN ASN VAL ILE TYR MET GLY THR PHE SER LLP SEQRES 25 C 479 SER LEU LEU PRO GLY LEU ARG ILE SER TYR MET VAL LEU SEQRES 26 C 479 PRO PRO GLU LEU LEU ARG ALA TYR LYS GLN ARG GLY TYR SEQRES 27 C 479 ASP LEU GLN THR CYS SER SER LEU THR GLN LEU THR LEU SEQRES 28 C 479 GLN GLU PHE ILE GLU SER GLY GLU TYR GLN LYS HIS ILE SEQRES 29 C 479 LYS LYS MET LYS GLN HIS TYR LYS GLU LYS ARG GLU ARG SEQRES 30 C 479 LEU ILE THR ALA LEU GLU ALA GLU PHE SER GLY GLU VAL SEQRES 31 C 479 THR VAL LYS GLY ALA ASN ALA GLY LEU HIS PHE VAL THR SEQRES 32 C 479 GLU PHE ASP THR ARG ARG THR GLU GLN ASP ILE LEU SER SEQRES 33 C 479 HIS ALA ALA GLY LEU GLN LEU GLU ILE PHE GLY MET SER SEQRES 34 C 479 ARG PHE ASN LEU LYS GLU ASN LYS ARG GLN THR GLY ARG SEQRES 35 C 479 PRO ALA LEU ILE ILE GLY PHE ALA ARG LEU LYS GLU GLU SEQRES 36 C 479 ASP ILE GLN GLU GLY VAL GLN ARG LEU PHE LYS ALA VAL SEQRES 37 C 479 TYR GLY HIS LYS LYS ILE PRO VAL THR GLY ASP SEQRES 1 D 479 MET ASP ILE THR ILE THR LEU ASP ARG SER GLU GLN ALA SEQRES 2 D 479 ASP TYR ILE TYR GLN GLN ILE TYR GLN LYS LEU LYS LYS SEQRES 3 D 479 GLU ILE LEU SER ARG ASN LEU LEU PRO HIS SER LYS VAL SEQRES 4 D 479 PRO SER LYS ARG GLU LEU ALA GLU ASN LEU LYS VAL SER SEQRES 5 D 479 VAL ASN SER VAL ASN SER ALA TYR GLN GLN LEU LEU ALA SEQRES 6 D 479 GLU GLY TYR LEU TYR ALA ILE GLU ARG LYS GLY PHE PHE SEQRES 7 D 479 VAL GLU GLU LEU ASP MET PHE SER ALA GLU GLU HIS PRO SEQRES 8 D 479 PRO PHE ALA LEU PRO ASP ASP LEU LYS GLU ILE HIS ILE SEQRES 9 D 479 ASP GLN SER ASP TRP ILE SER PHE SER HIS MET SER SER SEQRES 10 D 479 ASP THR ASP HIS PHE PRO ILE LYS SER TRP PHE ARG CYS SEQRES 11 D 479 GLU GLN LYS ALA ALA SER ARG SER TYR ARG THR LEU GLY SEQRES 12 D 479 ASP MET SER HIS PRO GLN GLY ILE TYR GLU VAL ARG ALA SEQRES 13 D 479 ALA ILE THR ARG LEU ILE SER LEU THR ARG GLY VAL LYS SEQRES 14 D 479 CYS ARG PRO GLU GLN MET ILE ILE GLY ALA GLY THR GLN SEQRES 15 D 479 VAL LEU MET GLN LEU LEU THR GLU LEU LEU PRO LYS GLU SEQRES 16 D 479 ALA VAL TYR ALA MET GLU GLU PRO GLY TYR ARG ARG MET SEQRES 17 D 479 TYR GLN LEU LEU LYS ASN ALA GLY LYS GLN VAL LYS THR SEQRES 18 D 479 ILE MET LEU ASP GLU LYS GLY MET SER ILE ALA GLU ILE SEQRES 19 D 479 THR ARG GLN GLN PRO ASP VAL LEU VAL THR THR PRO SER SEQRES 20 D 479 HIS GLN PHE PRO SER GLY THR ILE MET PRO VAL SER ARG SEQRES 21 D 479 ARG ILE GLN LEU LEU ASN TRP ALA ALA GLU GLU PRO ARG SEQRES 22 D 479 ARG TYR ILE ILE GLU ASP ASP TYR ASP SER GLU PHE THR SEQRES 23 D 479 TYR ASP VAL ASP SER ILE PRO ALA LEU GLN SER LEU ASP SEQRES 24 D 479 ARG PHE GLN ASN VAL ILE TYR MET GLY THR PHE SER LLP SEQRES 25 D 479 SER LEU LEU PRO GLY LEU ARG ILE SER TYR MET VAL LEU SEQRES 26 D 479 PRO PRO GLU LEU LEU ARG ALA TYR LYS GLN ARG GLY TYR SEQRES 27 D 479 ASP LEU GLN THR CYS SER SER LEU THR GLN LEU THR LEU SEQRES 28 D 479 GLN GLU PHE ILE GLU SER GLY GLU TYR GLN LYS HIS ILE SEQRES 29 D 479 LYS LYS MET LYS GLN HIS TYR LYS GLU LYS ARG GLU ARG SEQRES 30 D 479 LEU ILE THR ALA LEU GLU ALA GLU PHE SER GLY GLU VAL SEQRES 31 D 479 THR VAL LYS GLY ALA ASN ALA GLY LEU HIS PHE VAL THR SEQRES 32 D 479 GLU PHE ASP THR ARG ARG THR GLU GLN ASP ILE LEU SER SEQRES 33 D 479 HIS ALA ALA GLY LEU GLN LEU GLU ILE PHE GLY MET SER SEQRES 34 D 479 ARG PHE ASN LEU LYS GLU ASN LYS ARG GLN THR GLY ARG SEQRES 35 D 479 PRO ALA LEU ILE ILE GLY PHE ALA ARG LEU LYS GLU GLU SEQRES 36 D 479 ASP ILE GLN GLU GLY VAL GLN ARG LEU PHE LYS ALA VAL SEQRES 37 D 479 TYR GLY HIS LYS LYS ILE PRO VAL THR GLY ASP MODRES 4TV7 LLP A 312 LYS MODIFIED RESIDUE MODRES 4TV7 LLP B 312 LYS MODIFIED RESIDUE MODRES 4TV7 LLP C 312 LYS MODIFIED RESIDUE MODRES 4TV7 LLP D 312 LYS MODIFIED RESIDUE HET LLP A 312 24 HET LLP B 312 24 HET LLP C 312 24 HET LLP D 312 24 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 4(C14 H22 N3 O7 P) FORMUL 5 HOH *563(H2 O) HELIX 1 AA1 TYR A 15 SER A 30 1 16 HELIX 2 AA2 SER A 41 LEU A 49 1 9 HELIX 3 AA3 SER A 52 GLU A 66 1 15 HELIX 4 AA4 PRO A 96 LYS A 100 5 5 HELIX 5 AA5 PRO A 123 SER A 138 1 16 HELIX 6 AA6 ILE A 151 GLY A 167 1 17 HELIX 7 AA7 ARG A 171 GLU A 173 5 3 HELIX 8 AA8 GLY A 180 LEU A 192 1 13 HELIX 9 AA9 TYR A 205 ALA A 215 1 11 HELIX 10 AB1 SER A 230 GLN A 237 1 8 HELIX 11 AB2 PRO A 257 GLU A 270 1 14 HELIX 12 AB3 ALA A 294 ASP A 299 5 6 HELIX 13 AB4 PRO A 326 GLN A 335 1 10 HELIX 14 AB5 SER A 344 SER A 357 1 14 HELIX 15 AB6 GLY A 358 GLU A 385 1 28 HELIX 16 AB7 THR A 410 LEU A 421 1 12 HELIX 17 AB8 SER A 429 PHE A 431 5 3 HELIX 18 AB9 LYS A 453 GLU A 455 5 3 HELIX 19 AC1 ASP A 456 ARG A 463 1 8 HELIX 20 AC2 TYR B 15 SER B 30 1 16 HELIX 21 AC3 SER B 41 GLU B 47 1 7 HELIX 22 AC4 SER B 52 GLU B 66 1 15 HELIX 23 AC5 PRO B 96 LYS B 100 5 5 HELIX 24 AC6 PRO B 123 ARG B 137 1 15 HELIX 25 AC7 ILE B 151 GLY B 167 1 17 HELIX 26 AC8 ARG B 171 GLU B 173 5 3 HELIX 27 AC9 GLY B 180 LEU B 192 1 13 HELIX 28 AD1 TYR B 205 ALA B 215 1 11 HELIX 29 AD2 SER B 230 GLN B 237 1 8 HELIX 30 AD3 PRO B 257 GLU B 270 1 14 HELIX 31 AD4 ALA B 294 ASP B 299 1 6 HELIX 32 AD5 PRO B 326 GLN B 335 1 10 HELIX 33 AD6 SER B 344 SER B 357 1 14 HELIX 34 AD7 GLY B 358 SER B 387 1 30 HELIX 35 AD8 THR B 410 GLY B 420 1 11 HELIX 36 AD9 SER B 429 ASN B 432 5 4 HELIX 37 AE1 LYS B 453 GLU B 455 5 3 HELIX 38 AE2 ASP B 456 GLY B 470 1 15 HELIX 39 AE3 TYR C 15 SER C 30 1 16 HELIX 40 AE4 SER C 41 LYS C 50 1 10 HELIX 41 AE5 SER C 52 GLU C 66 1 15 HELIX 42 AE6 PRO C 96 LYS C 100 5 5 HELIX 43 AE7 PRO C 123 SER C 138 1 16 HELIX 44 AE8 ILE C 151 GLY C 167 1 17 HELIX 45 AE9 ARG C 171 GLU C 173 5 3 HELIX 46 AF1 GLY C 180 LEU C 192 1 13 HELIX 47 AF2 TYR C 205 ALA C 215 1 11 HELIX 48 AF3 SER C 230 GLN C 237 1 8 HELIX 49 AF4 PRO C 257 GLU C 270 1 14 HELIX 50 AF5 ALA C 294 ASP C 299 5 6 HELIX 51 AF6 PRO C 326 GLN C 335 1 10 HELIX 52 AF7 SER C 344 SER C 357 1 14 HELIX 53 AF8 GLY C 358 SER C 387 1 30 HELIX 54 AF9 THR C 410 GLY C 420 1 11 HELIX 55 AG1 SER C 429 ASN C 432 5 4 HELIX 56 AG2 LYS C 453 GLU C 455 5 3 HELIX 57 AG3 ASP C 456 GLY C 470 1 15 HELIX 58 AG4 TYR D 15 SER D 30 1 16 HELIX 59 AG5 SER D 41 LYS D 50 1 10 HELIX 60 AG6 SER D 52 GLY D 67 1 16 HELIX 61 AG7 PRO D 96 LYS D 100 5 5 HELIX 62 AG8 PRO D 123 TYR D 139 1 17 HELIX 63 AG9 ILE D 151 GLY D 167 1 17 HELIX 64 AH1 ARG D 171 GLU D 173 5 3 HELIX 65 AH2 GLY D 180 LEU D 192 1 13 HELIX 66 AH3 TYR D 205 ALA D 215 1 11 HELIX 67 AH4 SER D 230 GLN D 237 1 8 HELIX 68 AH5 PRO D 257 GLU D 271 1 15 HELIX 69 AH6 LEU D 295 ASP D 299 5 5 HELIX 70 AH7 PRO D 326 GLN D 335 1 10 HELIX 71 AH8 SER D 344 SER D 357 1 14 HELIX 72 AH9 GLY D 358 SER D 387 1 30 HELIX 73 AI1 THR D 410 LEU D 421 1 12 HELIX 74 AI2 SER D 429 ASN D 432 5 4 HELIX 75 AI3 LYS D 453 GLU D 455 5 3 HELIX 76 AI4 ASP D 456 GLY D 470 1 15 SHEET 1 AA1 3 LYS A 38 VAL A 39 0 SHEET 2 AA1 3 GLY A 76 VAL A 79 -1 O PHE A 77 N VAL A 39 SHEET 3 AA1 3 LEU A 69 ILE A 72 -1 N TYR A 70 O PHE A 78 SHEET 1 AA2 2 ILE A 110 SER A 111 0 SHEET 2 AA2 2 LEU A 423 GLU A 424 1 O GLU A 424 N ILE A 110 SHEET 1 AA3 8 MET A 175 GLY A 178 0 SHEET 2 AA3 8 SER A 321 VAL A 324 -1 O SER A 321 N GLY A 178 SHEET 3 AA3 8 VAL A 304 THR A 309 -1 N GLY A 308 O TYR A 322 SHEET 4 AA3 8 TYR A 275 ASP A 280 1 N ILE A 276 O ILE A 305 SHEET 5 AA3 8 VAL A 241 THR A 244 1 N LEU A 242 O ILE A 277 SHEET 6 AA3 8 TYR A 198 GLU A 202 1 N ALA A 199 O VAL A 243 SHEET 7 AA3 8 VAL A 219 ASP A 225 1 O ILE A 222 N MET A 200 SHEET 8 AA3 8 GLY A 228 MET A 229 -1 O GLY A 228 N ASP A 225 SHEET 1 AA4 3 HIS A 400 THR A 403 0 SHEET 2 AA4 3 LEU A 445 GLY A 448 -1 O LEU A 445 N THR A 403 SHEET 3 AA4 3 PHE A 426 GLY A 427 -1 N PHE A 426 O ILE A 446 SHEET 1 AA5 2 LEU B 69 TYR B 70 0 SHEET 2 AA5 2 PHE B 78 VAL B 79 -1 O PHE B 78 N TYR B 70 SHEET 1 AA6 2 ILE B 110 SER B 111 0 SHEET 2 AA6 2 LEU B 423 GLU B 424 1 O GLU B 424 N ILE B 110 SHEET 1 AA7 8 MET B 175 GLY B 178 0 SHEET 2 AA7 8 SER B 321 VAL B 324 -1 O SER B 321 N GLY B 178 SHEET 3 AA7 8 VAL B 304 THR B 309 -1 N GLY B 308 O TYR B 322 SHEET 4 AA7 8 TYR B 275 ASP B 279 1 N ILE B 276 O ILE B 305 SHEET 5 AA7 8 VAL B 241 THR B 244 1 N LEU B 242 O ILE B 277 SHEET 6 AA7 8 TYR B 198 GLU B 202 1 N ALA B 199 O VAL B 241 SHEET 7 AA7 8 VAL B 219 ASP B 225 1 O LYS B 220 N TYR B 198 SHEET 8 AA7 8 GLY B 228 MET B 229 -1 O GLY B 228 N ASP B 225 SHEET 1 AA8 4 VAL B 390 LYS B 393 0 SHEET 2 AA8 4 HIS B 400 PHE B 405 -1 O VAL B 402 N LYS B 393 SHEET 3 AA8 4 ALA B 444 GLY B 448 -1 O ILE B 447 N PHE B 401 SHEET 4 AA8 4 PHE B 426 GLY B 427 -1 N PHE B 426 O ILE B 446 SHEET 1 AA9 2 LEU C 69 ILE C 72 0 SHEET 2 AA9 2 GLY C 76 VAL C 79 -1 O PHE C 78 N TYR C 70 SHEET 1 AB1 2 ILE C 110 SER C 111 0 SHEET 2 AB1 2 LEU C 423 GLU C 424 1 O GLU C 424 N ILE C 110 SHEET 1 AB2 8 MET C 175 GLY C 178 0 SHEET 2 AB2 8 SER C 321 VAL C 324 -1 O SER C 321 N GLY C 178 SHEET 3 AB2 8 VAL C 304 THR C 309 -1 N TYR C 306 O VAL C 324 SHEET 4 AB2 8 TYR C 275 ASP C 279 1 N ILE C 276 O ILE C 305 SHEET 5 AB2 8 VAL C 241 THR C 244 1 N LEU C 242 O ILE C 277 SHEET 6 AB2 8 TYR C 198 GLU C 202 1 N ALA C 199 O VAL C 243 SHEET 7 AB2 8 VAL C 219 ASP C 225 1 O ILE C 222 N MET C 200 SHEET 8 AB2 8 GLY C 228 MET C 229 -1 O GLY C 228 N ASP C 225 SHEET 1 AB3 4 VAL C 390 LYS C 393 0 SHEET 2 AB3 4 HIS C 400 PHE C 405 -1 O GLU C 404 N THR C 391 SHEET 3 AB3 4 ALA C 444 GLY C 448 -1 O ILE C 447 N PHE C 401 SHEET 4 AB3 4 PHE C 426 GLY C 427 -1 N PHE C 426 O ILE C 446 SHEET 1 AB4 2 LEU D 69 ILE D 72 0 SHEET 2 AB4 2 GLY D 76 VAL D 79 -1 O GLY D 76 N ILE D 72 SHEET 1 AB5 2 ILE D 110 SER D 111 0 SHEET 2 AB5 2 LEU D 423 GLU D 424 1 O GLU D 424 N ILE D 110 SHEET 1 AB6 8 MET D 175 GLY D 178 0 SHEET 2 AB6 8 SER D 321 VAL D 324 -1 O SER D 321 N GLY D 178 SHEET 3 AB6 8 VAL D 304 THR D 309 -1 N GLY D 308 O TYR D 322 SHEET 4 AB6 8 TYR D 275 ASP D 279 1 N ILE D 276 O ILE D 305 SHEET 5 AB6 8 VAL D 241 THR D 244 1 N LEU D 242 O ILE D 277 SHEET 6 AB6 8 TYR D 198 GLU D 202 1 N ALA D 199 O VAL D 243 SHEET 7 AB6 8 VAL D 219 ASP D 225 1 O LYS D 220 N TYR D 198 SHEET 8 AB6 8 GLY D 228 MET D 229 -1 O GLY D 228 N ASP D 225 SHEET 1 AB7 4 VAL D 390 LYS D 393 0 SHEET 2 AB7 4 HIS D 400 PHE D 405 -1 O VAL D 402 N LYS D 393 SHEET 3 AB7 4 ALA D 444 GLY D 448 -1 O ILE D 447 N PHE D 401 SHEET 4 AB7 4 PHE D 426 GLY D 427 -1 N PHE D 426 O ILE D 446 LINK C SER A 311 N LLP A 312 1555 1555 1.34 LINK C LLP A 312 N SER A 313 1555 1555 1.33 LINK C SER B 311 N LLP B 312 1555 1555 1.33 LINK C LLP B 312 N SER B 313 1555 1555 1.33 LINK C SER C 311 N LLP C 312 1555 1555 1.33 LINK C LLP C 312 N SER C 313 1555 1555 1.34 LINK C SER D 311 N LLP D 312 1555 1555 1.33 LINK C LLP D 312 N SER D 313 1555 1555 1.34 CISPEP 1 GLU A 202 PRO A 203 0 -1.30 CISPEP 2 PHE A 250 PRO A 251 0 9.90 CISPEP 3 GLU B 202 PRO B 203 0 -1.53 CISPEP 4 PHE B 250 PRO B 251 0 3.95 CISPEP 5 GLU C 202 PRO C 203 0 -2.95 CISPEP 6 PHE C 250 PRO C 251 0 13.64 CISPEP 7 GLU D 202 PRO D 203 0 2.01 CISPEP 8 PHE D 250 PRO D 251 0 7.71 CRYST1 97.831 101.556 212.987 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010222 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009847 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004695 0.00000