HEADER TRANSFERASE 08-JUL-14 4TYI TITLE STRUCTURAL ANALYSIS OF THE HUMAN FIBROBLAST GROWTH FACTOR RECEPTOR 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST GROWTH FACTOR RECEPTOR 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 447-753; COMPND 5 SYNONYM: FGFR-4; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FGFR4, JTK2, TKF; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PFASTBAC HTB KEYWDS FIBROBLAST GROWTH FACTOR RECEPTOR, KINASE, TRANSFERASE, DOVITINIB, KEYWDS 2 PONATINB, PROTEROS BIOSTRUCTURES GMBH EXPDTA X-RAY DIFFRACTION AUTHOR E.LESCA,A.LAMMENS,R.HUBER,M.AUGUSTIN REVDAT 3 08-MAY-24 4TYI 1 REMARK REVDAT 2 10-DEC-14 4TYI 1 JRNL REVDAT 1 24-SEP-14 4TYI 0 JRNL AUTH E.LESCA,A.LAMMENS,R.HUBER,M.AUGUSTIN JRNL TITL STRUCTURAL ANALYSIS OF THE HUMAN FIBROBLAST GROWTH FACTOR JRNL TITL 2 RECEPTOR 4 KINASE. JRNL REF J.MOL.BIOL. V. 426 3744 2014 JRNL REFN ESSN 1089-8638 JRNL PMID 25219510 JRNL DOI 10.1016/J.JMB.2014.09.004 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 5427 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.281 REMARK 3 R VALUE (WORKING SET) : 0.277 REMARK 3 FREE R VALUE : 0.340 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.500 REMARK 3 FREE R VALUE TEST SET COUNT : 379 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 395 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.3830 REMARK 3 BIN FREE R VALUE SET COUNT : 26 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2176 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 119.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.08000 REMARK 3 B22 (A**2) : 2.08000 REMARK 3 B33 (A**2) : -4.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.730 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.719 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 105.396 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.904 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.853 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2072 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1864 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2833 ; 1.025 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4232 ; 0.914 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 274 ; 5.185 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;34.731 ;22.933 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 269 ;11.557 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;12.858 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 308 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2421 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 467 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1105 ; 3.766 ;11.098 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1104 ; 3.768 ;11.100 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1376 ; 6.247 ;18.727 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1377 ; 6.245 ;18.724 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 967 ; 3.427 ;11.501 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 967 ; 3.420 ;11.501 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1458 ; 5.733 ;19.265 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2263 ; 9.101 ;50.297 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2264 ; 9.099 ;50.307 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 446 A 552 REMARK 3 ORIGIN FOR THE GROUP (A): -4.4530 -25.1050 15.4100 REMARK 3 T TENSOR REMARK 3 T11: 0.3385 T22: 0.2091 REMARK 3 T33: 0.0684 T12: -0.0069 REMARK 3 T13: -0.0215 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 8.1294 L22: 6.9556 REMARK 3 L33: 6.4791 L12: -2.1653 REMARK 3 L13: -0.9074 L23: -0.2778 REMARK 3 S TENSOR REMARK 3 S11: -0.1961 S12: 0.0080 S13: -0.1752 REMARK 3 S21: 0.1923 S22: 0.2158 S23: 0.6630 REMARK 3 S31: -0.2577 S32: -0.5778 S33: -0.0196 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 553 A 750 REMARK 3 ORIGIN FOR THE GROUP (A): 9.7900 -20.8420 -8.5810 REMARK 3 T TENSOR REMARK 3 T11: 0.2506 T22: 0.2446 REMARK 3 T33: 0.0695 T12: -0.0593 REMARK 3 T13: 0.0215 T23: 0.1188 REMARK 3 L TENSOR REMARK 3 L11: 5.1100 L22: 4.3085 REMARK 3 L33: 7.6865 L12: 0.8118 REMARK 3 L13: 2.3267 L23: 2.5208 REMARK 3 S TENSOR REMARK 3 S11: 0.0753 S12: 0.4214 S13: 0.2934 REMARK 3 S21: 0.0236 S22: -0.1413 S23: -0.1001 REMARK 3 S31: -0.2704 S32: 0.2535 S33: 0.0659 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4TYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202513. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5806 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 61.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 0.1040 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.83100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID PH 4.0 1.6 M REMARK 280 AMMONIUM SULFATE FINAL PH: 5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.13100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.95000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 136.69650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.95000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.56550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.95000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 136.69650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.95000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.56550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.13100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 443 REMARK 465 MET A 444 REMARK 465 GLY A 445 REMARK 465 GLY A 569 REMARK 465 PRO A 570 REMARK 465 ASP A 571 REMARK 465 LEU A 572 REMARK 465 SER A 573 REMARK 465 PRO A 574 REMARK 465 ASP A 575 REMARK 465 GLY A 576 REMARK 465 PRO A 577 REMARK 465 ARG A 578 REMARK 465 SER A 579 REMARK 465 SER A 580 REMARK 465 GLU A 581 REMARK 465 GLY A 582 REMARK 465 VAL A 637 REMARK 465 HIS A 638 REMARK 465 HIS A 639 REMARK 465 ILE A 640 REMARK 465 ASP A 641 REMARK 465 TYR A 642 REMARK 465 TYR A 643 REMARK 465 LYS A 644 REMARK 465 LYS A 645 REMARK 465 THR A 646 REMARK 465 SER A 647 REMARK 465 ASN A 648 REMARK 465 GLY A 649 REMARK 465 ARG A 650 REMARK 465 SER A 751 REMARK 465 GLU A 752 REMARK 465 GLU A 753 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU A 449 CD1 CD2 REMARK 480 VAL A 450 CG1 CG2 REMARK 480 LEU A 452 CG CD1 CD2 REMARK 480 LEU A 454 CG CD1 CD2 REMARK 480 LEU A 459 CD1 CD2 REMARK 480 ARG A 466 CZ NH1 NH2 REMARK 480 LEU A 469 CD1 CD2 REMARK 480 LYS A 471 CG CD CE NZ REMARK 480 ARG A 483 CD NE CZ NH1 NH2 REMARK 480 GLU A 485 CG CD OE1 OE2 REMARK 480 ARG A 493 CG CD NE CZ NH1 NH2 REMARK 480 ASP A 495 CG OD1 OD2 REMARK 480 GLN A 496 CG CD OE1 NE2 REMARK 480 SER A 498 OG REMARK 480 LYS A 503 CD CE NZ REMARK 480 LEU A 505 CD1 CD2 REMARK 480 LYS A 506 CD CE NZ REMARK 480 LYS A 512 CG CD CE NZ REMARK 480 GLU A 520 CG CD OE1 OE2 REMARK 480 LEU A 526 CD1 CD2 REMARK 480 ILE A 527 CG1 CG2 CD1 REMARK 480 ARG A 529 CZ NH1 NH2 REMARK 480 LYS A 531 CG CD CE NZ REMARK 480 ILE A 533 CD1 REMARK 480 ILE A 534 CD1 REMARK 480 GLN A 542 CG CD OE1 NE2 REMARK 480 GLU A 543 CG CD OE1 OE2 REMARK 480 LYS A 555 CG CD CE NZ REMARK 480 LEU A 558 CD1 CD2 REMARK 480 ARG A 559 CZ NH1 NH2 REMARK 480 GLU A 560 CG CD OE1 OE2 REMARK 480 LEU A 584 CG CD1 CD2 REMARK 480 VAL A 588 CG1 CG2 REMARK 480 LEU A 589 CD1 CD2 REMARK 480 LEU A 603 CD1 CD2 REMARK 480 LYS A 607 CG CD CE NZ REMARK 480 ILE A 609 CD1 REMARK 480 ARG A 611 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 622 CD OE1 OE2 REMARK 480 LYS A 627 CD CE NZ REMARK 480 LEU A 633 CG CD1 CD2 REMARK 480 ARG A 635 CZ NH1 NH2 REMARK 480 LEU A 651 CD1 CD2 REMARK 480 LYS A 654 CD CE NZ REMARK 480 LEU A 661 CD1 CD2 REMARK 480 VAL A 665 CG1 CG2 REMARK 480 ILE A 682 CD1 REMARK 480 LEU A 685 CG CD1 CD2 REMARK 480 VAL A 695 CG1 CG2 REMARK 480 GLU A 696 CG CD OE1 OE2 REMARK 480 GLU A 697 CG CD OE1 OE2 REMARK 480 LEU A 698 CD1 CD2 REMARK 480 PHE A 699 CG CD1 CD2 CE1 CE2 CZ REMARK 480 LEU A 702 CD1 CD2 REMARK 480 GLU A 704 CG CD OE1 OE2 REMARK 480 GLU A 717 CD OE1 OE2 REMARK 480 LEU A 721 CG CD1 CD2 REMARK 480 LYS A 737 CG CD CE NZ REMARK 480 LEU A 739 CD1 CD2 REMARK 480 GLU A 741 CG CD OE1 OE2 REMARK 480 LEU A 743 CD1 CD2 REMARK 480 LYS A 745 CG CD CE NZ REMARK 480 VAL A 750 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 508 -37.58 -176.13 REMARK 500 ASN A 532 43.58 -104.82 REMARK 500 ILE A 534 97.49 -66.71 REMARK 500 LEU A 584 83.11 63.62 REMARK 500 ILE A 609 107.53 68.01 REMARK 500 ARG A 611 -70.77 -73.64 REMARK 500 LEU A 613 114.87 65.38 REMARK 500 GLU A 696 -54.17 -152.84 REMARK 500 ARG A 703 37.09 -95.54 REMARK 500 HIS A 713 78.10 59.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 38O A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4TYE RELATED DB: PDB REMARK 900 FGFR4 - APO-1-STRUCTURE REMARK 900 RELATED ID: 4TYG RELATED DB: PDB REMARK 900 FGFR4 - APO-2-STRUCTURE REMARK 900 RELATED ID: 4TYJ RELATED DB: PDB REMARK 900 FGFR4 - PONATINIB-STRUCTURE DBREF 4TYI A 447 753 UNP P22455 FGFR4_HUMAN 447 753 SEQADV 4TYI ALA A 443 UNP P22455 EXPRESSION TAG SEQADV 4TYI MET A 444 UNP P22455 EXPRESSION TAG SEQADV 4TYI GLY A 445 UNP P22455 EXPRESSION TAG SEQADV 4TYI SER A 446 UNP P22455 EXPRESSION TAG SEQRES 1 A 311 ALA MET GLY SER ALA GLY LEU VAL SER LEU ASP LEU PRO SEQRES 2 A 311 LEU ASP PRO LEU TRP GLU PHE PRO ARG ASP ARG LEU VAL SEQRES 3 A 311 LEU GLY LYS PRO LEU GLY GLU GLY CYS PHE GLY GLN VAL SEQRES 4 A 311 VAL ARG ALA GLU ALA PHE GLY MET ASP PRO ALA ARG PRO SEQRES 5 A 311 ASP GLN ALA SER THR VAL ALA VAL LYS MET LEU LYS ASP SEQRES 6 A 311 ASN ALA SER ASP LYS ASP LEU ALA ASP LEU VAL SER GLU SEQRES 7 A 311 MET GLU VAL MET LYS LEU ILE GLY ARG HIS LYS ASN ILE SEQRES 8 A 311 ILE ASN LEU LEU GLY VAL CYS THR GLN GLU GLY PRO LEU SEQRES 9 A 311 TYR VAL ILE VAL GLU CYS ALA ALA LYS GLY ASN LEU ARG SEQRES 10 A 311 GLU PHE LEU ARG ALA ARG ARG PRO PRO GLY PRO ASP LEU SEQRES 11 A 311 SER PRO ASP GLY PRO ARG SER SER GLU GLY PRO LEU SER SEQRES 12 A 311 PHE PRO VAL LEU VAL SER CYS ALA TYR GLN VAL ALA ARG SEQRES 13 A 311 GLY MET GLN TYR LEU GLU SER ARG LYS CYS ILE HIS ARG SEQRES 14 A 311 ASP LEU ALA ALA ARG ASN VAL LEU VAL THR GLU ASP ASN SEQRES 15 A 311 VAL MET LYS ILE ALA ASP PHE GLY LEU ALA ARG GLY VAL SEQRES 16 A 311 HIS HIS ILE ASP TYR TYR LYS LYS THR SER ASN GLY ARG SEQRES 17 A 311 LEU PRO VAL LYS TRP MET ALA PRO GLU ALA LEU PHE ASP SEQRES 18 A 311 ARG VAL TYR THR HIS GLN SER ASP VAL TRP SER PHE GLY SEQRES 19 A 311 ILE LEU LEU TRP GLU ILE PHE THR LEU GLY GLY SER PRO SEQRES 20 A 311 TYR PRO GLY ILE PRO VAL GLU GLU LEU PHE SER LEU LEU SEQRES 21 A 311 ARG GLU GLY HIS ARG MET ASP ARG PRO PRO HIS CYS PRO SEQRES 22 A 311 PRO GLU LEU TYR GLY LEU MET ARG GLU CYS TRP HIS ALA SEQRES 23 A 311 ALA PRO SER GLN ARG PRO THR PHE LYS GLN LEU VAL GLU SEQRES 24 A 311 ALA LEU ASP LYS VAL LEU LEU ALA VAL SER GLU GLU HET 38O A 801 29 HETNAM 38O 4-AMINO-5-FLUORO-3-[5-(4-METHYLPIPERAZIN-1-YL)-1H- HETNAM 2 38O BENZIMIDAZOL-2-YL]QUINOLIN-2(1H)-ONE HETSYN 38O DOVITINIB FORMUL 2 38O C21 H21 F N6 O HELIX 1 AA1 SER A 510 GLY A 528 1 19 HELIX 2 AA2 ASN A 557 ARG A 565 1 9 HELIX 3 AA3 SER A 585 ARG A 606 1 22 HELIX 4 AA4 ALA A 657 PHE A 662 1 6 HELIX 5 AA5 THR A 667 THR A 684 1 18 HELIX 6 AA6 GLU A 696 ARG A 703 1 8 HELIX 7 AA7 PRO A 715 TRP A 726 1 12 HELIX 8 AA8 THR A 735 VAL A 750 1 16 SHEET 1 AA1 5 LEU A 469 GLY A 474 0 SHEET 2 AA1 5 GLY A 479 PHE A 487 -1 O ARG A 483 N GLY A 470 SHEET 3 AA1 5 ALA A 497 LEU A 505 -1 O MET A 504 N GLN A 480 SHEET 4 AA1 5 TYR A 547 GLU A 551 -1 O VAL A 548 N LYS A 503 SHEET 5 AA1 5 LEU A 536 CYS A 540 -1 N CYS A 540 O TYR A 547 SHEET 1 AA2 2 VAL A 618 VAL A 620 0 SHEET 2 AA2 2 MET A 626 ILE A 628 -1 O LYS A 627 N LEU A 619 SITE 1 AC1 6 VAL A 550 CYS A 552 ALA A 553 ALA A 554 SITE 2 AC1 6 GLY A 556 LEU A 619 CRYST1 65.900 65.900 182.262 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015175 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015175 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005487 0.00000