HEADER TRANSFERASE/TRANSFERASE INHIBITOR 23-JUL-14 4U42 TITLE MAP4K4 T181E MUTANT BOUND TO INHIBITOR COMPOUND 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE KINASE 4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN (UNP RESIDUES 2-328); COMPND 5 SYNONYM: HPK/GCK-LIKE KINASE HGK,MAPK/ERK KINASE KINASE KINASE 4, COMPND 6 MEKKK 4,NCK-INTERACTING KINASE; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP4K4, HGK, KIAA0687, NIK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: SF9 KEYWDS KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.F.HARRIS,P.WU,M.COONS REVDAT 2 27-DEC-23 4U42 1 REMARK REVDAT 1 06-JAN-16 4U42 0 JRNL AUTH P.WU,H.CHEN,M.COONS,T.D.CRAWFORD,D.S.KIRKPATRICK,L.MURRAY, JRNL AUTH 2 C.O.NDUBAKU,J.NONOMIYA,V.PHAM,S.SCHMIDT,T.SMYSCZEK, JRNL AUTH 3 P.VITORINO,W.YE,S.F.HARRIS JRNL TITL STRUCTURAL PLASTICITY AND KINASE ACTIVATION IN A COHORT OF JRNL TITL 2 MAP4K4 STRUCTURES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 22409 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.7290 - 5.0048 1.00 2831 131 0.2213 0.3052 REMARK 3 2 5.0048 - 3.9736 1.00 2679 152 0.1881 0.2565 REMARK 3 3 3.9736 - 3.4716 1.00 2660 160 0.2173 0.2794 REMARK 3 4 3.4716 - 3.1544 1.00 2671 140 0.2456 0.3293 REMARK 3 5 3.1544 - 2.9284 1.00 2653 129 0.2703 0.3552 REMARK 3 6 2.9284 - 2.7558 1.00 2597 143 0.2627 0.3682 REMARK 3 7 2.7558 - 2.6178 1.00 2616 153 0.2754 0.3598 REMARK 3 8 2.6178 - 2.5040 0.98 2556 138 0.2862 0.3599 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 47.48 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.91740 REMARK 3 B22 (A**2) : 10.08690 REMARK 3 B33 (A**2) : -4.16950 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4595 REMARK 3 ANGLE : 1.176 6219 REMARK 3 CHIRALITY : 0.079 664 REMARK 3 PLANARITY : 0.004 792 REMARK 3 DIHEDRAL : 17.498 1717 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4U42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22483 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.87700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CITRATE, PH 8.3, 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.72400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.72950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.83600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.72950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.72400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.83600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 ASP A 4 REMARK 465 SER A 5 REMARK 465 PRO A 6 REMARK 465 ALA A 7 REMARK 465 LYS A 8 REMARK 465 SER A 9 REMARK 465 LEU A 10 REMARK 465 VAL A 11 REMARK 465 ASP A 12 REMARK 465 ILE A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 15 REMARK 465 VAL A 174 REMARK 465 SER A 175 REMARK 465 ALA A 176 REMARK 465 GLN A 177 REMARK 465 LEU A 178 REMARK 465 ASP A 179 REMARK 465 ARG A 180 REMARK 465 GLU A 181 REMARK 465 VAL A 182 REMARK 465 GLY A 183 REMARK 465 ARG A 184 REMARK 465 ARG A 185 REMARK 465 ASN A 186 REMARK 465 LYS A 311 REMARK 465 LYS A 312 REMARK 465 ARG A 313 REMARK 465 GLY A 314 REMARK 465 GLU A 315 REMARK 465 LYS A 316 REMARK 465 ASP A 317 REMARK 465 GLU A 318 REMARK 465 THR A 319 REMARK 465 GLU A 320 REMARK 465 TYR A 321 REMARK 465 GLU A 322 REMARK 465 TYR A 323 REMARK 465 SER A 324 REMARK 465 GLY A 325 REMARK 465 SER A 326 REMARK 465 GLU A 327 REMARK 465 GLU A 328 REMARK 465 GLY A 329 REMARK 465 ASN A 330 REMARK 465 SER A 331 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 ALA B 2 REMARK 465 ASN B 3 REMARK 465 ASP B 4 REMARK 465 SER B 5 REMARK 465 PRO B 6 REMARK 465 ALA B 7 REMARK 465 LYS B 8 REMARK 465 SER B 9 REMARK 465 LEU B 10 REMARK 465 VAL B 11 REMARK 465 ASP B 12 REMARK 465 ILE B 13 REMARK 465 ASP B 14 REMARK 465 LEU B 15 REMARK 465 SER B 16 REMARK 465 GLU B 60 REMARK 465 ASP B 61 REMARK 465 GLU B 62 REMARK 465 GLU B 63 REMARK 465 GLU B 64 REMARK 465 GLU B 65 REMARK 465 ILE B 66 REMARK 465 LYS B 67 REMARK 465 LEU B 68 REMARK 465 GLU B 69 REMARK 465 ILE B 70 REMARK 465 ASN B 71 REMARK 465 MET B 72 REMARK 465 LEU B 73 REMARK 465 LYS B 74 REMARK 465 GLY B 96 REMARK 465 HIS B 97 REMARK 465 ASP B 98 REMARK 465 SER B 175 REMARK 465 ALA B 176 REMARK 465 GLN B 177 REMARK 465 LEU B 178 REMARK 465 ASP B 179 REMARK 465 ARG B 180 REMARK 465 GLU B 181 REMARK 465 VAL B 182 REMARK 465 GLY B 183 REMARK 465 ARG B 184 REMARK 465 ARG B 185 REMARK 465 LYS B 311 REMARK 465 LYS B 312 REMARK 465 ARG B 313 REMARK 465 GLY B 314 REMARK 465 GLU B 315 REMARK 465 LYS B 316 REMARK 465 ASP B 317 REMARK 465 GLU B 318 REMARK 465 THR B 319 REMARK 465 GLU B 320 REMARK 465 TYR B 321 REMARK 465 GLU B 322 REMARK 465 TYR B 323 REMARK 465 SER B 324 REMARK 465 GLY B 325 REMARK 465 SER B 326 REMARK 465 GLU B 327 REMARK 465 GLU B 328 REMARK 465 GLY B 329 REMARK 465 ASN B 330 REMARK 465 SER B 331 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 18 -90.90 -110.91 REMARK 500 ARG A 19 161.81 174.86 REMARK 500 VAL A 30 104.22 74.22 REMARK 500 ASN A 33 21.11 -175.88 REMARK 500 THR A 59 -128.06 -142.45 REMARK 500 GLU A 63 -71.04 37.81 REMARK 500 HIS A 79 -52.56 -120.30 REMARK 500 ARG A 80 -20.19 125.73 REMARK 500 PRO A 95 143.72 -28.36 REMARK 500 HIS A 97 177.09 -48.90 REMARK 500 ASN A 123 61.90 35.48 REMARK 500 ARG A 152 -2.77 92.25 REMARK 500 ASP A 153 40.54 -154.31 REMARK 500 ALA A 208 87.07 46.77 REMARK 500 GLN A 292 78.00 -106.39 REMARK 500 ARG B 19 162.78 -48.50 REMARK 500 GLU B 29 167.01 168.17 REMARK 500 ASN B 33 71.53 48.76 REMARK 500 ALA B 110 7.13 -67.10 REMARK 500 ASN B 123 54.48 31.75 REMARK 500 ARG B 152 -7.01 83.11 REMARK 500 ASP B 153 50.30 -159.84 REMARK 500 ASP B 171 38.30 71.57 REMARK 500 LEU B 270 48.13 -96.86 REMARK 500 ARG B 308 -83.98 -41.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 77 O REMARK 620 2 ILE A 82 O 78.7 REMARK 620 3 THR A 84 OG1 68.5 78.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 77 O REMARK 620 2 HIS B 79 O 80.8 REMARK 620 3 ILE B 82 O 62.5 73.9 REMARK 620 4 THR B 84 OG1 86.3 167.0 98.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3C8 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3C8 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4U3Y RELATED DB: PDB REMARK 900 RELATED ID: 4U3Z RELATED DB: PDB REMARK 900 RELATED ID: 4U40 RELATED DB: PDB REMARK 900 RELATED ID: 4U41 RELATED DB: PDB REMARK 900 RELATED ID: 4U43 RELATED DB: PDB REMARK 900 RELATED ID: 4U44 RELATED DB: PDB REMARK 900 RELATED ID: 4U45 RELATED DB: PDB DBREF 4U42 A 2 328 UNP O95819 M4K4_HUMAN 2 328 DBREF 4U42 B 2 328 UNP O95819 M4K4_HUMAN 2 328 SEQADV 4U42 GLY A 0 UNP O95819 EXPRESSION TAG SEQADV 4U42 SER A 1 UNP O95819 EXPRESSION TAG SEQADV 4U42 GLU A 181 UNP O95819 THR 181 ENGINEERED MUTATION SEQADV 4U42 GLY A 329 UNP O95819 EXPRESSION TAG SEQADV 4U42 ASN A 330 UNP O95819 EXPRESSION TAG SEQADV 4U42 SER A 331 UNP O95819 EXPRESSION TAG SEQADV 4U42 GLY B 0 UNP O95819 EXPRESSION TAG SEQADV 4U42 SER B 1 UNP O95819 EXPRESSION TAG SEQADV 4U42 GLU B 181 UNP O95819 THR 181 ENGINEERED MUTATION SEQADV 4U42 GLY B 329 UNP O95819 EXPRESSION TAG SEQADV 4U42 ASN B 330 UNP O95819 EXPRESSION TAG SEQADV 4U42 SER B 331 UNP O95819 EXPRESSION TAG SEQRES 1 A 332 GLY SER ALA ASN ASP SER PRO ALA LYS SER LEU VAL ASP SEQRES 2 A 332 ILE ASP LEU SER SER LEU ARG ASP PRO ALA GLY ILE PHE SEQRES 3 A 332 GLU LEU VAL GLU VAL VAL GLY ASN GLY THR TYR GLY GLN SEQRES 4 A 332 VAL TYR LYS GLY ARG HIS VAL LYS THR GLY GLN LEU ALA SEQRES 5 A 332 ALA ILE LYS VAL MET ASP VAL THR GLU ASP GLU GLU GLU SEQRES 6 A 332 GLU ILE LYS LEU GLU ILE ASN MET LEU LYS LYS TYR SER SEQRES 7 A 332 HIS HIS ARG ASN ILE ALA THR TYR TYR GLY ALA PHE ILE SEQRES 8 A 332 LYS LYS SER PRO PRO GLY HIS ASP ASP GLN LEU TRP LEU SEQRES 9 A 332 VAL MET GLU PHE CYS GLY ALA GLY SER ILE THR ASP LEU SEQRES 10 A 332 VAL LYS ASN THR LYS GLY ASN THR LEU LYS GLU ASP TRP SEQRES 11 A 332 ILE ALA TYR ILE SER ARG GLU ILE LEU ARG GLY LEU ALA SEQRES 12 A 332 HIS LEU HIS ILE HIS HIS VAL ILE HIS ARG ASP ILE LYS SEQRES 13 A 332 GLY GLN ASN VAL LEU LEU THR GLU ASN ALA GLU VAL LYS SEQRES 14 A 332 LEU VAL ASP PHE GLY VAL SER ALA GLN LEU ASP ARG GLU SEQRES 15 A 332 VAL GLY ARG ARG ASN THR PHE ILE GLY THR PRO TYR TRP SEQRES 16 A 332 MET ALA PRO GLU VAL ILE ALA CYS ASP GLU ASN PRO ASP SEQRES 17 A 332 ALA THR TYR ASP TYR ARG SER ASP LEU TRP SER CYS GLY SEQRES 18 A 332 ILE THR ALA ILE GLU MET ALA GLU GLY ALA PRO PRO LEU SEQRES 19 A 332 CYS ASP MET HIS PRO MET ARG ALA LEU PHE LEU ILE PRO SEQRES 20 A 332 ARG ASN PRO PRO PRO ARG LEU LYS SER LYS LYS TRP SER SEQRES 21 A 332 LYS LYS PHE PHE SER PHE ILE GLU GLY CYS LEU VAL LYS SEQRES 22 A 332 ASN TYR MET GLN ARG PRO SER THR GLU GLN LEU LEU LYS SEQRES 23 A 332 HIS PRO PHE ILE ARG ASP GLN PRO ASN GLU ARG GLN VAL SEQRES 24 A 332 ARG ILE GLN LEU LYS ASP HIS ILE ASP ARG THR ARG LYS SEQRES 25 A 332 LYS ARG GLY GLU LYS ASP GLU THR GLU TYR GLU TYR SER SEQRES 26 A 332 GLY SER GLU GLU GLY ASN SER SEQRES 1 B 332 GLY SER ALA ASN ASP SER PRO ALA LYS SER LEU VAL ASP SEQRES 2 B 332 ILE ASP LEU SER SER LEU ARG ASP PRO ALA GLY ILE PHE SEQRES 3 B 332 GLU LEU VAL GLU VAL VAL GLY ASN GLY THR TYR GLY GLN SEQRES 4 B 332 VAL TYR LYS GLY ARG HIS VAL LYS THR GLY GLN LEU ALA SEQRES 5 B 332 ALA ILE LYS VAL MET ASP VAL THR GLU ASP GLU GLU GLU SEQRES 6 B 332 GLU ILE LYS LEU GLU ILE ASN MET LEU LYS LYS TYR SER SEQRES 7 B 332 HIS HIS ARG ASN ILE ALA THR TYR TYR GLY ALA PHE ILE SEQRES 8 B 332 LYS LYS SER PRO PRO GLY HIS ASP ASP GLN LEU TRP LEU SEQRES 9 B 332 VAL MET GLU PHE CYS GLY ALA GLY SER ILE THR ASP LEU SEQRES 10 B 332 VAL LYS ASN THR LYS GLY ASN THR LEU LYS GLU ASP TRP SEQRES 11 B 332 ILE ALA TYR ILE SER ARG GLU ILE LEU ARG GLY LEU ALA SEQRES 12 B 332 HIS LEU HIS ILE HIS HIS VAL ILE HIS ARG ASP ILE LYS SEQRES 13 B 332 GLY GLN ASN VAL LEU LEU THR GLU ASN ALA GLU VAL LYS SEQRES 14 B 332 LEU VAL ASP PHE GLY VAL SER ALA GLN LEU ASP ARG GLU SEQRES 15 B 332 VAL GLY ARG ARG ASN THR PHE ILE GLY THR PRO TYR TRP SEQRES 16 B 332 MET ALA PRO GLU VAL ILE ALA CYS ASP GLU ASN PRO ASP SEQRES 17 B 332 ALA THR TYR ASP TYR ARG SER ASP LEU TRP SER CYS GLY SEQRES 18 B 332 ILE THR ALA ILE GLU MET ALA GLU GLY ALA PRO PRO LEU SEQRES 19 B 332 CYS ASP MET HIS PRO MET ARG ALA LEU PHE LEU ILE PRO SEQRES 20 B 332 ARG ASN PRO PRO PRO ARG LEU LYS SER LYS LYS TRP SER SEQRES 21 B 332 LYS LYS PHE PHE SER PHE ILE GLU GLY CYS LEU VAL LYS SEQRES 22 B 332 ASN TYR MET GLN ARG PRO SER THR GLU GLN LEU LEU LYS SEQRES 23 B 332 HIS PRO PHE ILE ARG ASP GLN PRO ASN GLU ARG GLN VAL SEQRES 24 B 332 ARG ILE GLN LEU LYS ASP HIS ILE ASP ARG THR ARG LYS SEQRES 25 B 332 LYS ARG GLY GLU LYS ASP GLU THR GLU TYR GLU TYR SER SEQRES 26 B 332 GLY SER GLU GLU GLY ASN SER HET MES A 401 12 HET 3C8 A 402 24 HET MG A 403 1 HET 3C8 B 401 24 HET MG B 402 1 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM 3C8 6-[(3S)-3-(4-METHYL-1H-PYRAZOL-3-YL)PIPERIDIN-1- HETNAM 2 3C8 YL]PYRIDO[3,2-D]PYRIMIDIN-4-AMINE HETNAM MG MAGNESIUM ION FORMUL 3 MES C6 H13 N O4 S FORMUL 4 3C8 2(C16 H19 N7) FORMUL 5 MG 2(MG 2+) FORMUL 8 HOH *47(H2 O) HELIX 1 AA1 GLU A 63 SER A 77 1 15 HELIX 2 AA2 SER A 112 ASN A 119 1 8 HELIX 3 AA3 THR A 120 THR A 124 5 5 HELIX 4 AA4 LYS A 126 HIS A 147 1 22 HELIX 5 AA5 LYS A 155 GLN A 157 5 3 HELIX 6 AA6 ALA A 196 ILE A 200 5 5 HELIX 7 AA7 ARG A 213 GLY A 229 1 17 HELIX 8 AA8 HIS A 237 ILE A 245 1 9 HELIX 9 AA9 SER A 259 LEU A 270 1 12 HELIX 10 AB1 ASN A 273 ARG A 277 5 5 HELIX 11 AB2 SER A 279 LYS A 285 1 7 HELIX 12 AB3 HIS A 286 ASP A 291 1 6 HELIX 13 AB4 ASN A 294 ARG A 310 1 17 HELIX 14 AB5 GLY B 32 THR B 35 5 4 HELIX 15 AB6 ILE B 113 ASN B 119 1 7 HELIX 16 AB7 THR B 120 THR B 124 5 5 HELIX 17 AB8 LYS B 126 HIS B 147 1 22 HELIX 18 AB9 ALA B 196 ILE B 200 5 5 HELIX 19 AC1 ASP B 211 GLY B 229 1 19 HELIX 20 AC2 HIS B 237 ILE B 245 1 9 HELIX 21 AC3 SER B 259 LEU B 270 1 12 HELIX 22 AC4 ASN B 273 ARG B 277 5 5 HELIX 23 AC5 SER B 279 LYS B 285 1 7 HELIX 24 AC6 HIS B 286 ASP B 291 1 6 HELIX 25 AC7 ASN B 294 THR B 309 1 16 SHEET 1 AA1 5 PHE A 25 LEU A 27 0 SHEET 2 AA1 5 VAL A 39 HIS A 44 -1 O ARG A 43 N GLU A 26 SHEET 3 AA1 5 LEU A 50 VAL A 58 -1 O ILE A 53 N TYR A 40 SHEET 4 AA1 5 ASP A 99 MET A 105 -1 O LEU A 101 N MET A 56 SHEET 5 AA1 5 TYR A 85 LYS A 91 -1 N TYR A 86 O VAL A 104 SHEET 1 AA2 2 VAL A 159 LEU A 161 0 SHEET 2 AA2 2 VAL A 167 LEU A 169 -1 O LYS A 168 N LEU A 160 SHEET 1 AA3 5 PHE B 25 VAL B 30 0 SHEET 2 AA3 5 VAL B 39 HIS B 44 -1 O LYS B 41 N GLU B 29 SHEET 3 AA3 5 LEU B 50 ASP B 57 -1 O ILE B 53 N TYR B 40 SHEET 4 AA3 5 GLN B 100 GLU B 106 -1 O LEU B 101 N MET B 56 SHEET 5 AA3 5 TYR B 85 LYS B 91 -1 N GLY B 87 O VAL B 104 SHEET 1 AA4 3 GLY B 111 SER B 112 0 SHEET 2 AA4 3 VAL B 159 LEU B 161 -1 O LEU B 161 N GLY B 111 SHEET 3 AA4 3 VAL B 167 LEU B 169 -1 O LYS B 168 N LEU B 160 LINK O SER A 77 MG MG A 403 1555 1555 2.79 LINK O ILE A 82 MG MG A 403 1555 1555 2.68 LINK OG1 THR A 84 MG MG A 403 1555 1555 2.69 LINK O SER B 77 MG MG B 402 1555 1555 2.53 LINK O HIS B 79 MG MG B 402 1555 1555 2.70 LINK O ILE B 82 MG MG B 402 1555 1555 2.60 LINK OG1 THR B 84 MG MG B 402 1555 1555 2.51 CISPEP 1 VAL A 28 GLU A 29 0 20.05 CISPEP 2 VAL A 31 GLY A 32 0 -14.36 CISPEP 3 LYS B 92 SER B 93 0 -0.57 CISPEP 4 PRO B 94 PRO B 95 0 -1.20 SITE 1 AC1 4 MET A 275 GLN A 276 MET B 275 GLN B 276 SITE 1 AC2 12 TYR A 36 VAL A 39 ALA A 52 LYS A 54 SITE 2 AC2 12 LEU A 103 MET A 105 GLU A 106 PHE A 107 SITE 3 AC2 12 CYS A 108 LEU A 160 VAL A 170 ASP A 171 SITE 1 AC3 5 SER A 77 HIS A 79 ARG A 80 ILE A 82 SITE 2 AC3 5 THR A 84 SITE 1 AC4 11 TYR B 36 VAL B 39 ALA B 52 LYS B 54 SITE 2 AC4 11 LEU B 103 GLU B 106 PHE B 107 CYS B 108 SITE 3 AC4 11 LEU B 160 VAL B 170 ASP B 171 SITE 1 AC5 6 SER B 77 HIS B 79 ILE B 82 THR B 84 SITE 2 AC5 6 GLU B 106 LYS B 168 CRYST1 79.448 83.672 95.459 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012587 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011951 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010476 0.00000